Query 008450
Match_columns 565
No_of_seqs 137 out of 2056
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 12:18:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008450.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008450hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 1.7E-45 3.7E-50 400.9 39.0 537 7-547 16-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 5.1E-38 1.1E-42 326.6 29.3 461 11-542 16-491 (498)
3 PRK10207 dipeptide/tripeptide 100.0 2.4E-35 5.3E-40 320.4 39.8 464 9-544 7-482 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 5.7E-34 1.2E-38 309.2 39.1 451 11-541 5-471 (475)
5 PRK15462 dipeptide/tripeptide 100.0 7.4E-33 1.6E-37 297.7 41.3 450 23-542 17-483 (493)
6 PRK09584 tppB putative tripept 100.0 1.8E-32 3.9E-37 299.2 39.8 457 10-543 15-484 (500)
7 PRK05122 major facilitator sup 99.9 3.3E-24 7.1E-29 227.4 36.1 368 23-539 23-390 (399)
8 PRK03545 putative arabinose tr 99.9 2.2E-24 4.8E-29 228.3 32.5 351 38-539 31-381 (390)
9 COG2814 AraJ Arabinose efflux 99.9 3.9E-24 8.6E-29 220.9 31.2 356 37-542 34-390 (394)
10 PRK12382 putative transporter; 99.9 1.1E-23 2.4E-28 222.9 34.8 366 23-537 23-388 (392)
11 TIGR00893 2A0114 d-galactonate 99.9 7.4E-24 1.6E-28 221.7 31.0 384 33-536 11-397 (399)
12 PRK11646 multidrug resistance 99.9 5.6E-24 1.2E-28 226.2 30.4 368 23-535 18-385 (400)
13 TIGR00926 2A1704 Peptide:H+ sy 99.9 3.1E-24 6.7E-29 238.4 29.2 335 29-417 1-342 (654)
14 PRK10489 enterobactin exporter 99.9 7.7E-24 1.7E-28 226.2 30.8 394 14-549 16-410 (417)
15 PRK11551 putative 3-hydroxyphe 99.9 1.7E-23 3.7E-28 222.3 33.0 362 35-537 34-395 (406)
16 PRK10077 xylE D-xylose transpo 99.9 1.4E-23 3E-28 228.0 32.9 403 46-547 50-466 (479)
17 TIGR00903 2A0129 major facilit 99.9 2E-23 4.3E-28 219.4 32.1 356 32-535 7-362 (368)
18 TIGR00900 2A0121 H+ Antiporter 99.9 1.7E-23 3.8E-28 217.4 31.1 353 23-495 7-361 (365)
19 PRK14995 methyl viologen resis 99.9 8.3E-24 1.8E-28 231.2 29.7 382 34-496 24-412 (495)
20 PRK10054 putative transporter; 99.9 1.4E-23 3.1E-28 222.8 28.8 345 23-497 15-359 (395)
21 PRK09705 cynX putative cyanate 99.9 3.2E-23 7E-28 219.9 31.1 356 37-544 30-387 (393)
22 PRK10504 putative transporter; 99.9 7E-23 1.5E-27 222.2 34.3 392 23-498 18-416 (471)
23 PRK15402 multidrug efflux syst 99.9 1.5E-22 3.3E-27 215.4 34.9 343 29-496 27-369 (406)
24 TIGR01299 synapt_SV2 synaptic 99.9 7.1E-23 1.5E-27 230.3 33.4 155 35-220 186-353 (742)
25 PF07690 MFS_1: Major Facilita 99.9 1.8E-23 3.9E-28 216.4 26.6 348 23-488 4-352 (352)
26 TIGR00899 2A0120 sugar efflux 99.9 1.1E-22 2.5E-27 213.0 32.6 366 23-537 5-373 (375)
27 PRK09874 drug efflux system pr 99.9 3.5E-23 7.5E-28 219.7 28.7 372 23-538 22-398 (408)
28 PRK11663 regulatory protein Uh 99.9 1E-22 2.2E-27 219.0 31.7 147 38-215 45-191 (434)
29 TIGR00711 efflux_EmrB drug res 99.9 1.8E-23 3.8E-28 227.3 25.7 380 33-496 19-409 (485)
30 PRK09556 uhpT sugar phosphate 99.9 6.5E-23 1.4E-27 222.5 30.1 156 39-220 52-210 (467)
31 PRK10213 nepI ribonucleoside t 99.9 1.2E-22 2.5E-27 215.7 31.2 152 33-216 38-189 (394)
32 TIGR00890 2A0111 Oxalate/Forma 99.9 4.3E-23 9.4E-28 215.2 27.2 355 34-531 21-375 (377)
33 PRK10406 alpha-ketoglutarate t 99.9 3.4E-22 7.3E-27 214.7 34.3 160 32-214 38-211 (432)
34 PRK10642 proline/glycine betai 99.9 4.6E-22 1E-26 217.2 34.2 160 31-213 31-204 (490)
35 PRK15403 multidrug efflux syst 99.9 1.4E-21 3E-26 208.8 36.5 171 19-220 11-189 (413)
36 PRK12307 putative sialic acid 99.9 2.1E-22 4.5E-27 215.4 30.1 146 34-210 36-181 (426)
37 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.8E-22 6.2E-27 214.0 30.7 159 32-221 24-188 (412)
38 TIGR00894 2A0114euk Na(+)-depe 99.9 1.5E-22 3.3E-27 219.4 28.4 380 45-538 70-450 (465)
39 TIGR00879 SP MFS transporter, 99.9 5.7E-22 1.2E-26 213.2 32.2 409 40-544 52-476 (481)
40 PRK10091 MFS transport protein 99.9 5.5E-22 1.2E-26 209.6 29.6 164 25-220 13-176 (382)
41 TIGR00710 efflux_Bcr_CflA drug 99.9 1.7E-21 3.7E-26 204.7 32.9 331 38-493 27-357 (385)
42 KOG2532 Permease of the major 99.9 1.5E-22 3.2E-27 217.1 25.0 379 44-539 66-448 (466)
43 TIGR00891 2A0112 putative sial 99.9 7.3E-22 1.6E-26 208.6 29.7 161 23-215 20-182 (405)
44 TIGR00887 2A0109 phosphate:H+ 99.9 3.2E-21 7E-26 211.2 35.3 149 47-220 52-223 (502)
45 cd06174 MFS The Major Facilita 99.9 1.9E-21 4.2E-26 200.3 31.6 344 23-536 7-350 (352)
46 PRK11195 lysophospholipid tran 99.9 2E-21 4.3E-26 206.2 32.4 157 23-215 11-167 (393)
47 TIGR00898 2A0119 cation transp 99.9 6.5E-22 1.4E-26 216.5 29.4 388 39-546 112-502 (505)
48 TIGR00892 2A0113 monocarboxyla 99.9 5.8E-22 1.3E-26 214.4 28.6 374 38-532 41-415 (455)
49 TIGR00897 2A0118 polyol permea 99.9 5.6E-21 1.2E-25 203.3 34.7 395 7-537 4-400 (402)
50 PRK11273 glpT sn-glycerol-3-ph 99.9 4E-21 8.7E-26 207.6 33.3 157 36-220 49-206 (452)
51 PRK09952 shikimate transporter 99.9 5.2E-21 1.1E-25 205.9 33.9 369 40-537 47-432 (438)
52 TIGR00881 2A0104 phosphoglycer 99.9 1.2E-21 2.6E-26 204.4 27.8 156 34-220 13-169 (379)
53 TIGR00895 2A0115 benzoate tran 99.9 3.4E-21 7.3E-26 202.6 31.1 363 34-494 35-397 (398)
54 PRK03699 putative transporter; 99.9 5E-21 1.1E-25 203.1 32.4 355 35-539 26-381 (394)
55 PRK15011 sugar efflux transpor 99.9 1E-20 2.2E-25 200.6 33.3 371 16-537 14-390 (393)
56 PLN00028 nitrate transmembrane 99.9 4.5E-21 9.8E-26 208.5 31.0 152 37-220 57-217 (476)
57 PRK11102 bicyclomycin/multidru 99.9 1.4E-20 2.9E-25 197.8 33.4 155 34-220 10-164 (377)
58 PRK03893 putative sialic acid 99.9 3.3E-21 7.1E-26 210.4 29.4 151 31-212 35-185 (496)
59 PRK09528 lacY galactoside perm 99.9 3.6E-21 7.7E-26 205.9 28.8 399 10-539 5-404 (420)
60 PRK11652 emrD multidrug resist 99.9 7.8E-21 1.7E-25 201.3 30.8 148 39-217 31-178 (394)
61 COG2271 UhpC Sugar phosphate p 99.9 2.7E-21 5.7E-26 197.6 25.9 378 38-540 51-436 (448)
62 PRK03633 putative MFS family t 99.9 1.6E-20 3.4E-25 198.3 32.5 147 23-201 14-160 (381)
63 TIGR00889 2A0110 nucleoside tr 99.9 2.6E-20 5.7E-25 199.2 33.2 382 33-542 20-406 (418)
64 PRK11043 putative transporter; 99.9 2.7E-20 5.9E-25 197.6 33.0 148 42-220 32-179 (401)
65 TIGR00902 2A0127 phenyl propri 99.9 5.1E-20 1.1E-24 194.5 34.6 360 23-533 12-374 (382)
66 PRK15075 citrate-proton sympor 99.9 2.1E-20 4.6E-25 200.9 31.2 157 30-209 29-199 (434)
67 PRK10473 multidrug efflux syst 99.9 7.8E-20 1.7E-24 193.5 33.0 152 37-219 24-175 (392)
68 TIGR00712 glpT glycerol-3-phos 99.9 2.1E-20 4.5E-25 201.2 28.7 157 37-221 48-205 (438)
69 PF05977 MFS_3: Transmembrane 99.9 6.9E-20 1.5E-24 199.7 32.9 351 23-496 18-368 (524)
70 KOG0569 Permease of the major 99.9 1.2E-19 2.6E-24 192.9 32.3 399 53-550 62-466 (485)
71 PRK06814 acylglycerophosphoeth 99.9 7.1E-20 1.5E-24 219.5 34.1 337 51-495 52-394 (1140)
72 PF00854 PTR2: POT family; In 99.9 5E-22 1.1E-26 209.3 13.3 366 82-481 1-370 (372)
73 PRK08633 2-acyl-glycerophospho 99.9 1.1E-19 2.3E-24 218.0 34.5 354 22-495 16-382 (1146)
74 KOG1330 Sugar transporter/spin 99.9 1.5E-21 3.3E-26 201.1 15.2 151 42-223 59-210 (493)
75 PRK15034 nitrate/nitrite trans 99.9 1.2E-19 2.5E-24 193.7 29.3 377 23-541 41-457 (462)
76 PRK11128 putative 3-phenylprop 99.9 2.9E-19 6.2E-24 188.8 32.1 337 24-496 13-354 (382)
77 TIGR00882 2A0105 oligosacchari 99.9 3E-19 6.4E-24 189.5 32.3 383 22-535 9-392 (396)
78 TIGR00792 gph sugar (Glycoside 99.9 1.2E-19 2.7E-24 194.5 28.5 356 24-498 8-381 (437)
79 TIGR00883 2A0106 metabolite-pr 99.9 1E-19 2.2E-24 190.9 26.8 342 37-496 14-374 (394)
80 COG2223 NarK Nitrate/nitrite t 99.9 8.2E-20 1.8E-24 187.1 24.3 390 14-542 12-405 (417)
81 PRK10133 L-fucose transporter; 99.9 1.1E-18 2.3E-23 187.9 34.1 131 37-195 47-177 (438)
82 TIGR00886 2A0108 nitrite extru 99.8 1.7E-19 3.6E-24 188.5 24.9 158 24-212 10-178 (366)
83 TIGR00896 CynX cyanate transpo 99.8 2.5E-19 5.4E-24 187.1 25.2 331 32-498 16-349 (355)
84 TIGR00885 fucP L-fucose:H+ sym 99.8 3.9E-18 8.3E-23 182.0 32.8 157 33-217 20-202 (410)
85 KOG0254 Predicted transporter 99.8 1.3E-18 2.8E-23 191.1 30.0 422 33-551 64-496 (513)
86 TIGR00901 2A0125 AmpG-related 99.8 2.4E-18 5.1E-23 179.7 28.4 160 32-220 4-176 (356)
87 PRK11010 ampG muropeptide tran 99.8 1.7E-17 3.7E-22 181.1 35.8 377 23-538 20-403 (491)
88 PRK11902 ampG muropeptide tran 99.8 7.4E-17 1.6E-21 171.6 35.6 163 25-217 9-177 (402)
89 KOG2615 Permease of the major 99.8 3.3E-17 7.2E-22 164.9 24.9 119 46-196 63-181 (451)
90 KOG3764 Vesicular amine transp 99.8 5.3E-18 1.1E-22 171.6 18.5 148 45-222 100-247 (464)
91 KOG0255 Synaptic vesicle trans 99.8 1.6E-16 3.5E-21 174.9 31.1 140 44-217 111-250 (521)
92 TIGR00806 rfc RFC reduced fola 99.8 2.5E-16 5.4E-21 165.7 29.6 154 36-222 46-203 (511)
93 PF03825 Nuc_H_symport: Nucleo 99.8 1.1E-15 2.4E-20 161.9 34.2 369 34-541 21-398 (400)
94 TIGR01301 GPH_sucrose GPH fami 99.8 1.5E-15 3.3E-20 163.2 33.0 431 27-542 16-475 (477)
95 PRK10429 melibiose:sodium symp 99.8 4.7E-16 1E-20 169.1 28.7 361 24-498 15-394 (473)
96 PF06609 TRI12: Fungal trichot 99.7 6.9E-16 1.5E-20 168.3 29.3 389 36-494 64-464 (599)
97 TIGR00788 fbt folate/biopterin 99.7 1.2E-15 2.5E-20 165.7 30.4 372 23-497 34-413 (468)
98 PRK09669 putative symporter Ya 99.7 4.4E-16 9.4E-21 168.0 26.8 353 25-499 19-390 (444)
99 COG0738 FucP Fucose permease [ 99.7 1.8E-15 3.9E-20 154.4 27.7 169 18-214 11-202 (422)
100 KOG0252 Inorganic phosphate tr 99.7 2.5E-17 5.5E-22 169.4 14.0 404 48-549 81-508 (538)
101 PRK09848 glucuronide transport 99.7 2.9E-15 6.2E-20 161.7 30.7 354 24-498 17-389 (448)
102 PF00083 Sugar_tr: Sugar (and 99.7 2.3E-21 5E-26 209.0 -17.3 140 51-218 46-188 (451)
103 TIGR00805 oat sodium-independe 99.7 1.5E-15 3.3E-20 170.2 27.0 188 28-222 45-281 (633)
104 TIGR02718 sider_RhtX_FptX side 99.7 2.6E-14 5.6E-19 151.3 32.2 171 23-221 9-183 (390)
105 PF13347 MFS_2: MFS/sugar tran 99.7 2.3E-15 5E-20 161.5 24.1 357 25-499 11-386 (428)
106 KOG2533 Permease of the major 99.7 4.1E-14 8.8E-19 152.6 30.0 150 45-225 75-230 (495)
107 KOG0253 Synaptic vesicle trans 99.7 1.9E-14 4.1E-19 144.2 24.4 424 29-546 91-527 (528)
108 PTZ00207 hypothetical protein; 99.7 1.1E-13 2.5E-18 151.8 31.6 152 37-217 48-200 (591)
109 PF01306 LacY_symp: LacY proto 99.6 9.2E-14 2E-18 145.5 27.6 384 24-541 16-403 (412)
110 COG2807 CynX Cyanate permease 99.6 8.6E-14 1.9E-18 140.2 26.0 365 23-539 20-386 (395)
111 KOG2504 Monocarboxylate transp 99.6 4.7E-14 1E-18 153.4 25.2 419 23-538 50-476 (509)
112 PRK11462 putative transporter; 99.6 1.9E-13 4.2E-18 148.0 29.6 175 23-220 17-202 (460)
113 PF11700 ATG22: Vacuole efflux 99.6 8.3E-12 1.8E-16 135.1 33.6 367 53-540 72-470 (477)
114 PF03209 PUCC: PUCC protein; 99.6 8.3E-12 1.8E-16 128.9 31.7 379 42-534 6-394 (403)
115 KOG4686 Predicted sugar transp 99.5 5.9E-14 1.3E-18 135.9 13.7 363 38-539 66-444 (459)
116 COG2211 MelB Na+/melibiose sym 99.5 2E-11 4.3E-16 129.3 27.9 358 24-498 21-397 (467)
117 TIGR00880 2_A_01_02 Multidrug 99.4 3.1E-12 6.7E-17 113.4 9.6 135 56-221 3-137 (141)
118 COG2270 Permeases of the major 99.3 6.1E-10 1.3E-14 115.0 27.1 131 33-190 33-170 (438)
119 PRK09556 uhpT sugar phosphate 99.3 1.4E-11 3E-16 133.8 15.0 167 25-220 268-447 (467)
120 PRK05122 major facilitator sup 99.3 2.3E-11 5.1E-16 128.9 15.6 163 28-224 229-391 (399)
121 PRK10642 proline/glycine betai 99.3 5.3E-11 1.2E-15 130.1 18.6 167 26-220 261-428 (490)
122 PRK15011 sugar efflux transpor 99.3 4E-11 8.6E-16 127.2 16.8 160 30-221 231-390 (393)
123 TIGR00889 2A0110 nucleoside tr 99.3 3.1E-11 6.7E-16 129.3 15.2 163 33-223 226-403 (418)
124 TIGR00890 2A0111 Oxalate/Forma 99.3 2.9E-11 6.3E-16 125.9 14.2 154 32-215 222-375 (377)
125 TIGR01272 gluP glucose/galacto 99.3 4.2E-10 9.1E-15 115.6 22.4 83 127-215 8-106 (310)
126 cd06174 MFS The Major Facilita 99.3 5.8E-11 1.3E-15 122.1 15.4 166 23-219 183-349 (352)
127 PRK09874 drug efflux system pr 99.3 1.1E-10 2.3E-15 124.0 17.1 158 33-221 237-397 (408)
128 KOG2563 Permease of the major 99.3 3.7E-10 8E-15 117.1 19.5 391 35-550 64-462 (480)
129 TIGR00899 2A0120 sugar efflux 99.2 1.2E-10 2.7E-15 121.8 15.8 157 32-220 216-372 (375)
130 PRK03545 putative arabinose tr 99.2 2.4E-10 5.2E-15 121.0 17.8 165 26-223 216-381 (390)
131 PRK03633 putative MFS family t 99.2 1.2E-10 2.5E-15 123.0 15.1 154 33-221 218-371 (381)
132 PRK09528 lacY galactoside perm 99.2 1.6E-10 3.5E-15 123.6 16.2 154 36-220 244-401 (420)
133 TIGR00883 2A0106 metabolite-pr 99.2 2E-10 4.3E-15 120.4 16.1 162 23-212 227-391 (394)
134 PRK03699 putative transporter; 99.2 9.7E-11 2.1E-15 124.3 13.4 162 24-217 214-375 (394)
135 PRK03893 putative sialic acid 99.2 2.1E-10 4.6E-15 125.2 16.4 149 33-210 293-441 (496)
136 PRK09705 cynX putative cyanate 99.2 3.1E-10 6.7E-15 120.5 16.4 167 24-223 214-382 (393)
137 PRK11551 putative 3-hydroxyphe 99.2 3E-10 6.5E-15 120.7 16.3 160 29-220 234-394 (406)
138 TIGR01299 synapt_SV2 synaptic 99.2 2E-10 4.3E-15 130.1 15.5 133 57-221 601-733 (742)
139 PRK09952 shikimate transporter 99.2 4.4E-10 9.5E-15 121.1 17.6 171 24-221 259-432 (438)
140 PRK12382 putative transporter; 99.2 2E-10 4.3E-15 121.6 14.4 158 29-220 230-387 (392)
141 PRK10489 enterobactin exporter 99.2 2E-10 4.4E-15 122.7 14.2 158 32-220 240-397 (417)
142 PF03137 OATP: Organic Anion T 99.2 3.5E-12 7.7E-17 139.8 -0.6 190 27-227 14-255 (539)
143 TIGR00897 2A0118 polyol permea 99.2 7E-10 1.5E-14 118.1 16.9 169 23-220 230-399 (402)
144 TIGR00902 2A0127 phenyl propri 99.2 3.5E-10 7.6E-15 119.5 14.4 161 23-217 213-374 (382)
145 TIGR00893 2A0114 d-galactonate 99.1 3.4E-10 7.4E-15 118.2 12.8 169 23-219 223-396 (399)
146 KOG2325 Predicted transporter/ 99.1 6.1E-10 1.3E-14 118.4 13.8 162 34-222 53-229 (488)
147 PRK11663 regulatory protein Uh 99.1 8.4E-10 1.8E-14 118.8 15.0 164 29-220 257-422 (434)
148 PRK11273 glpT sn-glycerol-3-ph 99.1 6.7E-10 1.5E-14 120.2 14.1 165 27-219 265-432 (452)
149 PRK11010 ampG muropeptide tran 99.1 1.3E-09 2.9E-14 119.2 16.5 171 26-223 233-404 (491)
150 TIGR00891 2A0112 putative sial 99.1 6.2E-10 1.3E-14 117.5 13.4 146 32-207 255-401 (405)
151 COG2814 AraJ Arabinose efflux 99.1 1.1E-09 2.5E-14 113.8 14.8 169 23-223 219-387 (394)
152 TIGR00879 SP MFS transporter, 99.1 1.1E-09 2.3E-14 117.8 15.1 167 37-223 305-471 (481)
153 KOG2816 Predicted transporter 99.1 1.3E-08 2.8E-13 109.4 22.9 367 14-499 17-394 (463)
154 KOG3626 Organic anion transpor 99.1 1.3E-08 2.8E-13 112.6 23.3 193 23-226 104-347 (735)
155 TIGR00892 2A0113 monocarboxyla 99.1 4.9E-10 1.1E-14 121.4 12.0 160 28-218 254-417 (455)
156 PRK15075 citrate-proton sympor 99.1 3.2E-09 6.9E-14 114.3 17.6 147 27-201 250-398 (434)
157 PRK10504 putative transporter; 99.1 1.6E-09 3.5E-14 117.6 14.5 150 23-200 269-418 (471)
158 PF03092 BT1: BT1 family; Int 99.1 1.5E-08 3.3E-13 108.9 21.7 162 37-223 11-176 (433)
159 TIGR00712 glpT glycerol-3-phos 99.1 2.2E-09 4.8E-14 115.6 14.9 170 25-223 261-434 (438)
160 TIGR02718 sider_RhtX_FptX side 99.0 3.9E-09 8.5E-14 111.7 14.4 168 23-216 216-385 (390)
161 PF05631 DUF791: Protein of un 99.0 1.3E-07 2.7E-12 96.7 24.5 154 39-220 57-214 (354)
162 COG2271 UhpC Sugar phosphate p 99.0 2.2E-09 4.7E-14 110.8 11.7 163 30-220 267-432 (448)
163 PF11700 ATG22: Vacuole efflux 99.0 7.2E-09 1.6E-13 112.3 16.5 174 25-221 291-467 (477)
164 PRK15402 multidrug efflux syst 99.0 1.3E-08 2.8E-13 108.3 17.4 156 32-214 232-387 (406)
165 PRK10406 alpha-ketoglutarate t 99.0 1.3E-08 2.9E-13 109.3 17.5 164 28-220 256-422 (432)
166 PRK10077 xylE D-xylose transpo 99.0 1.4E-08 3E-13 110.3 17.7 157 40-223 295-458 (479)
167 PRK11128 putative 3-phenylprop 99.0 6.2E-09 1.3E-13 110.0 14.2 154 28-215 218-372 (382)
168 PRK14995 methyl viologen resis 99.0 3.4E-09 7.3E-14 116.1 12.6 147 22-196 266-412 (495)
169 PRK12307 putative sialic acid 99.0 1.3E-08 2.8E-13 108.8 16.2 142 34-205 250-391 (426)
170 COG2223 NarK Nitrate/nitrite t 99.0 5.9E-09 1.3E-13 107.7 12.8 177 23-224 226-403 (417)
171 PRK11902 ampG muropeptide tran 99.0 1E-08 2.2E-13 109.1 15.3 157 36-223 230-391 (402)
172 KOG3762 Predicted transporter 98.9 2E-07 4.4E-12 98.7 23.3 145 356-545 409-554 (618)
173 PRK10091 MFS transport protein 98.9 1.8E-08 3.8E-13 106.5 15.9 157 31-219 215-373 (382)
174 TIGR00900 2A0121 H+ Antiporter 98.9 6.6E-09 1.4E-13 107.7 12.3 143 27-199 222-365 (365)
175 TIGR00792 gph sugar (Glycoside 98.9 5.5E-09 1.2E-13 112.1 11.7 140 37-201 244-384 (437)
176 PF05977 MFS_3: Transmembrane 98.9 1E-08 2.2E-13 112.4 13.6 158 32-220 235-392 (524)
177 TIGR02332 HpaX 4-hydroxyphenyl 98.9 8E-09 1.7E-13 110.4 12.5 157 23-210 250-409 (412)
178 PRK10054 putative transporter; 98.9 1.5E-08 3.2E-13 107.8 14.3 164 25-219 216-381 (395)
179 TIGR00882 2A0105 oligosacchari 98.9 2.6E-08 5.6E-13 105.7 15.9 151 36-217 236-390 (396)
180 TIGR00711 efflux_EmrB drug res 98.9 6.7E-09 1.5E-13 112.8 11.2 148 23-197 263-410 (485)
181 PLN00028 nitrate transmembrane 98.9 2E-08 4.4E-13 109.5 14.8 158 32-222 269-433 (476)
182 TIGR01272 gluP glucose/galacto 98.9 2.8E-08 6.1E-13 102.1 14.3 147 30-210 155-303 (310)
183 TIGR00881 2A0104 phosphoglycer 98.9 1.1E-08 2.5E-13 106.4 11.4 150 27-204 228-379 (379)
184 PRK10133 L-fucose transporter; 98.9 2.7E-08 5.8E-13 107.3 13.9 157 23-213 266-424 (438)
185 PRK10213 nepI ribonucleoside t 98.8 9.9E-08 2.1E-12 101.4 17.1 154 28-214 229-383 (394)
186 TIGR00710 efflux_Bcr_CflA drug 98.8 6.1E-08 1.3E-12 101.7 15.2 151 29-207 220-371 (385)
187 TIGR00896 CynX cyanate transpo 98.8 3.8E-08 8.2E-13 102.7 13.0 143 26-199 208-350 (355)
188 KOG3098 Uncharacterized conser 98.8 1.6E-06 3.5E-11 92.3 25.3 105 57-193 56-160 (461)
189 TIGR00895 2A0115 benzoate tran 98.8 3.2E-08 6.9E-13 103.9 12.5 137 26-194 261-397 (398)
190 PRK09848 glucuronide transport 98.8 1.8E-08 3.9E-13 108.8 10.4 155 23-200 236-391 (448)
191 PRK11646 multidrug resistance 98.8 4E-08 8.7E-13 104.6 12.7 152 35-217 228-383 (400)
192 PRK08633 2-acyl-glycerophospho 98.8 7.3E-08 1.6E-12 116.2 16.2 150 30-210 247-398 (1146)
193 COG2270 Permeases of the major 98.8 8.7E-08 1.9E-12 99.2 14.1 159 30-219 267-426 (438)
194 PRK11195 lysophospholipid tran 98.8 1.4E-07 3E-12 100.2 15.8 155 32-218 222-376 (393)
195 PRK06814 acylglycerophosphoeth 98.7 1.1E-07 2.5E-12 114.6 15.7 172 26-210 236-410 (1140)
196 PF13347 MFS_2: MFS/sugar tran 98.7 9.7E-08 2.1E-12 102.5 13.6 155 23-201 233-388 (428)
197 TIGR00894 2A0114euk Na(+)-depe 98.7 1.3E-07 2.8E-12 102.6 14.6 169 23-220 269-448 (465)
198 PRK15034 nitrate/nitrite trans 98.7 2.5E-07 5.4E-12 99.4 16.2 178 23-221 260-453 (462)
199 KOG4686 Predicted sugar transp 98.7 1E-07 2.2E-12 93.2 11.8 149 25-206 274-426 (459)
200 TIGR00887 2A0109 phosphate:H+ 98.7 2E-07 4.3E-12 102.3 14.6 160 30-217 303-484 (502)
201 KOG2504 Monocarboxylate transp 98.7 5.5E-08 1.2E-12 106.1 9.5 166 25-222 308-476 (509)
202 PRK11043 putative transporter; 98.6 6.4E-07 1.4E-11 95.1 15.9 148 29-204 217-364 (401)
203 PRK10473 multidrug efflux syst 98.6 7E-07 1.5E-11 94.5 15.5 138 36-209 224-361 (392)
204 KOG1330 Sugar transporter/spin 98.6 4.1E-08 8.9E-13 102.4 5.7 145 355-543 70-214 (493)
205 TIGR00901 2A0125 AmpG-related 98.6 2.4E-07 5.1E-12 96.6 11.3 137 24-181 218-355 (356)
206 TIGR00898 2A0119 cation transp 98.6 7E-07 1.5E-11 97.9 14.5 132 58-220 362-493 (505)
207 PF07690 MFS_1: Major Facilita 98.6 1.6E-07 3.4E-12 96.9 9.0 132 29-188 220-352 (352)
208 TIGR00903 2A0129 major facilit 98.6 1.8E-06 3.9E-11 90.9 16.9 158 23-218 200-361 (368)
209 COG2807 CynX Cyanate permease 98.6 1.2E-06 2.7E-11 89.0 14.5 161 26-217 219-380 (395)
210 PRK11102 bicyclomycin/multidru 98.6 1.7E-06 3.8E-11 90.7 16.5 134 32-193 211-345 (377)
211 PRK09669 putative symporter Ya 98.5 7.4E-07 1.6E-11 96.2 11.9 128 51-201 264-392 (444)
212 TIGR00880 2_A_01_02 Multidrug 98.5 3.1E-06 6.7E-11 74.5 13.3 132 362-538 7-138 (141)
213 KOG0569 Permease of the major 98.4 2.9E-06 6.3E-11 91.1 14.0 180 23-225 277-457 (485)
214 KOG4332 Predicted sugar transp 98.4 1.1E-05 2.4E-10 78.5 16.1 92 40-157 61-153 (454)
215 KOG3764 Vesicular amine transp 98.4 1.5E-06 3.3E-11 89.1 10.0 147 354-545 107-254 (464)
216 PF03825 Nuc_H_symport: Nucleo 98.4 4.8E-06 1.1E-10 88.5 14.3 161 34-220 226-393 (400)
217 PRK15403 multidrug efflux syst 98.4 2E-05 4.3E-10 84.4 18.5 140 357-541 55-194 (413)
218 COG0477 ProP Permeases of the 98.3 7.2E-06 1.6E-10 81.2 13.6 141 42-211 28-174 (338)
219 PF02487 CLN3: CLN3 protein; 98.3 0.00079 1.7E-08 70.8 29.0 133 54-222 62-195 (402)
220 PRK11652 emrD multidrug resist 98.3 1.2E-05 2.5E-10 85.2 15.7 137 37-202 229-365 (394)
221 TIGR00885 fucP L-fucose:H+ sym 98.3 6.9E-06 1.5E-10 87.8 13.5 154 25-212 242-402 (410)
222 PF01770 Folate_carrier: Reduc 98.3 0.00021 4.5E-09 75.2 24.0 155 36-222 24-182 (412)
223 TIGR00886 2A0108 nitrite extru 98.3 2.2E-05 4.7E-10 81.8 16.7 112 355-495 39-150 (366)
224 PRK10429 melibiose:sodium symp 98.3 3.7E-06 8E-11 91.6 10.7 142 38-200 254-396 (473)
225 KOG2532 Permease of the major 98.2 4.9E-06 1.1E-10 89.9 10.2 170 23-221 266-446 (466)
226 KOG0253 Synaptic vesicle trans 98.2 1.8E-05 3.9E-10 80.6 13.0 166 23-221 334-518 (528)
227 TIGR00924 yjdL_sub1_fam amino 98.2 2.2E-05 4.8E-10 85.6 14.1 170 33-223 290-469 (475)
228 PF03209 PUCC: PUCC protein; 98.2 6E-05 1.3E-09 78.5 16.1 164 29-219 213-395 (403)
229 TIGR00805 oat sodium-independe 98.1 2.4E-05 5.3E-10 88.2 13.9 134 354-497 69-234 (633)
230 TIGR01301 GPH_sucrose GPH fami 98.1 6.1E-05 1.3E-09 81.6 16.2 178 355-542 41-222 (477)
231 PF06813 Nodulin-like: Nodulin 98.1 0.00014 3E-09 71.9 17.0 131 36-192 22-152 (250)
232 PRK10207 dipeptide/tripeptide 98.1 4.4E-05 9.6E-10 83.5 14.9 134 360-537 57-193 (489)
233 PRK09584 tppB putative tripept 98.1 7.7E-05 1.7E-09 81.9 16.1 127 369-539 73-202 (500)
234 COG2211 MelB Na+/melibiose sym 98.1 2.6E-05 5.5E-10 83.3 11.4 154 24-200 245-399 (467)
235 PRK11462 putative transporter; 98.1 6.3E-05 1.4E-09 81.7 14.5 151 26-200 239-390 (460)
236 PRK15462 dipeptide/tripeptide 98.0 9.6E-05 2.1E-09 80.4 15.1 137 358-538 50-189 (493)
237 PF01306 LacY_symp: LacY proto 98.0 4.7E-05 1E-09 80.4 11.6 155 38-223 243-401 (412)
238 TIGR00788 fbt folate/biopterin 98.0 2E-05 4.4E-10 85.7 8.8 144 44-208 281-429 (468)
239 KOG3762 Predicted transporter 98.0 1.4E-05 3.1E-10 85.0 7.1 151 43-224 398-549 (618)
240 COG0738 FucP Fucose permease [ 97.9 0.00011 2.4E-09 76.0 12.8 147 33-213 254-400 (422)
241 PF06963 FPN1: Ferroportin1 (F 97.9 0.027 5.9E-07 60.3 29.7 61 432-492 353-413 (432)
242 PF06609 TRI12: Fungal trichot 97.8 0.00092 2E-08 74.0 17.8 139 355-539 80-218 (599)
243 PF12832 MFS_1_like: MFS_1 lik 97.8 0.0001 2.3E-09 59.0 7.6 65 26-92 11-75 (77)
244 TIGR00806 rfc RFC reduced fola 97.7 0.00059 1.3E-08 73.0 14.7 109 356-494 65-173 (511)
245 KOG2533 Permease of the major 97.7 0.00012 2.6E-09 79.6 9.4 156 23-208 281-442 (495)
246 PTZ00207 hypothetical protein; 97.7 0.0012 2.5E-08 73.5 16.2 131 369-540 77-207 (591)
247 KOG2615 Permease of the major 97.6 0.00016 3.5E-09 74.1 8.2 112 355-496 70-181 (451)
248 KOG0637 Sucrose transporter an 97.6 0.00083 1.8E-08 70.6 13.1 155 23-194 40-202 (498)
249 KOG2325 Predicted transporter/ 97.4 0.0031 6.7E-08 67.8 13.9 162 356-545 74-236 (488)
250 PF05978 UNC-93: Ion channel r 97.3 0.0031 6.7E-08 57.7 12.0 137 25-193 5-147 (156)
251 PF00083 Sugar_tr: Sugar (and 97.3 4.5E-06 9.8E-11 90.0 -8.3 169 32-224 269-438 (451)
252 KOG0254 Predicted transporter 97.3 0.0021 4.5E-08 70.9 12.5 134 356-533 92-225 (513)
253 KOG0255 Synaptic vesicle trans 97.1 0.0032 6.9E-08 69.4 11.9 129 357-533 122-250 (521)
254 TIGR00769 AAA ADP/ATP carrier 97.1 0.62 1.3E-05 50.6 28.9 142 40-195 27-189 (472)
255 PF06779 DUF1228: Protein of u 96.9 0.0065 1.4E-07 49.3 8.1 68 36-104 12-79 (85)
256 KOG3574 Acetyl-CoA transporter 96.8 0.28 6.1E-06 50.9 20.7 63 432-494 365-428 (510)
257 KOG2816 Predicted transporter 96.7 0.0063 1.4E-07 65.8 9.2 125 39-195 265-390 (463)
258 KOG0252 Inorganic phosphate tr 96.5 0.0021 4.5E-08 67.8 3.9 128 67-220 364-496 (538)
259 COG3104 PTR2 Dipeptide/tripept 95.9 0.017 3.7E-07 61.8 6.9 119 394-545 93-213 (498)
260 KOG3626 Organic anion transpor 95.8 0.084 1.8E-06 59.5 12.0 102 435-542 237-347 (735)
261 PF00854 PTR2: POT family; In 95.8 0.09 1.9E-06 55.3 11.9 124 395-544 3-129 (372)
262 PF06963 FPN1: Ferroportin1 (F 95.8 0.083 1.8E-06 56.6 11.4 159 10-192 254-413 (432)
263 PRK03612 spermidine synthase; 95.7 0.23 5.1E-06 54.7 15.3 154 38-219 37-195 (521)
264 PF06813 Nodulin-like: Nodulin 95.7 0.13 2.9E-06 50.9 11.9 91 392-495 65-155 (250)
265 TIGR00926 2A1704 Peptide:H+ sy 95.6 0.073 1.6E-06 60.2 10.7 95 428-539 558-652 (654)
266 PF03092 BT1: BT1 family; Int 95.3 0.16 3.4E-06 54.8 11.8 135 369-540 40-177 (433)
267 PF05978 UNC-93: Ion channel r 95.2 0.23 4.9E-06 45.5 10.6 61 434-494 88-148 (156)
268 KOG2563 Permease of the major 95.1 0.24 5.2E-06 52.6 11.7 153 46-225 296-453 (480)
269 PF03137 OATP: Organic Anion T 95.0 0.0064 1.4E-07 67.2 0.0 168 23-197 313-514 (539)
270 KOG4332 Predicted sugar transp 94.0 0.39 8.4E-06 47.6 9.5 142 52-217 283-426 (454)
271 KOG0637 Sucrose transporter an 93.0 0.5 1.1E-05 50.3 9.1 167 313-493 34-201 (498)
272 KOG3098 Uncharacterized conser 92.4 1.3 2.8E-05 47.7 11.6 117 61-193 289-410 (461)
273 TIGR00939 2a57 Equilibrative N 92.2 19 0.00042 38.8 30.2 59 434-492 371-429 (437)
274 PF02487 CLN3: CLN3 protein; 91.6 0.81 1.7E-05 48.5 8.9 113 50-194 280-394 (402)
275 PF07672 MFS_Mycoplasma: Mycop 91.0 5.9 0.00013 39.3 13.5 61 167-227 2-67 (267)
276 PF13000 Acatn: Acetyl-coenzym 90.6 29 0.00064 37.8 23.4 54 437-490 407-460 (544)
277 KOG3810 Micronutrient transpor 90.5 4.7 0.0001 41.7 12.5 101 432-540 323-423 (433)
278 PF05631 DUF791: Protein of un 88.4 34 0.00075 35.6 20.4 143 355-541 71-219 (354)
279 TIGR00769 AAA ADP/ATP carrier 86.3 29 0.00063 37.8 16.3 58 439-496 132-190 (472)
280 KOG1479 Nucleoside transporter 85.7 53 0.0011 34.9 23.3 59 433-491 341-399 (406)
281 KOG3880 Predicted small molecu 84.9 26 0.00056 35.9 13.6 42 453-494 360-401 (409)
282 COG0477 ProP Permeases of the 83.9 17 0.00036 35.1 12.3 61 435-495 94-156 (338)
283 PF01770 Folate_carrier: Reduc 81.7 55 0.0012 34.9 15.5 62 433-495 92-153 (412)
284 PF03219 TLC: TLC ATP/ADP tran 73.5 1E+02 0.0023 33.7 15.3 42 455-496 164-205 (491)
285 KOG3097 Predicted membrane pro 73.2 36 0.00078 35.1 10.6 107 23-161 36-142 (390)
286 COG5336 Uncharacterized protei 72.5 12 0.00026 31.6 5.8 49 54-102 45-93 (116)
287 PF03219 TLC: TLC ATP/ADP tran 71.8 1.6E+02 0.0035 32.3 19.8 134 50-196 57-205 (491)
288 TIGR00939 2a57 Equilibrative N 68.1 47 0.001 35.8 11.1 52 434-490 105-156 (437)
289 PF07857 DUF1632: CEO family ( 67.6 52 0.0011 32.6 10.3 66 466-541 74-139 (254)
290 KOG2601 Iron transporter [Inor 66.3 1.8E+02 0.004 30.8 15.4 57 434-490 385-441 (503)
291 KOG3574 Acetyl-CoA transporter 62.2 1.1E+02 0.0024 32.5 11.6 114 362-491 76-189 (510)
292 PRK03612 spermidine synthase; 61.3 99 0.0021 34.2 12.2 52 443-495 118-169 (521)
293 PF11947 DUF3464: Protein of u 59.0 35 0.00077 31.0 6.7 90 73-186 56-145 (153)
294 COG3202 ATP/ADP translocase [E 45.5 4.5E+02 0.0097 28.8 27.9 143 38-196 45-209 (509)
295 PF09527 ATPase_gene1: Putativ 45.2 78 0.0017 23.1 5.6 38 58-95 7-44 (55)
296 KOG1237 H+/oligopeptide sympor 41.3 92 0.002 34.9 8.0 136 394-545 105-252 (571)
297 KOG4830 Predicted sugar transp 37.2 62 0.0013 32.3 5.0 62 23-86 25-95 (412)
298 PF13000 Acatn: Acetyl-coenzym 34.4 3.5E+02 0.0076 29.8 10.6 36 459-494 142-177 (544)
299 KOG3810 Micronutrient transpor 31.6 6.4E+02 0.014 26.6 12.0 133 14-176 233-367 (433)
300 KOG1479 Nucleoside transporter 30.8 6.9E+02 0.015 26.7 13.3 86 434-535 116-201 (406)
301 KOG3880 Predicted small molecu 30.1 50 0.0011 33.9 3.2 57 129-191 342-398 (409)
302 PF06645 SPC12: Microsomal sig 28.9 98 0.0021 24.5 4.1 43 172-217 9-51 (76)
303 COG3619 Predicted membrane pro 28.4 5.6E+02 0.012 24.9 13.1 42 176-218 173-214 (226)
304 PRK10263 DNA translocase FtsK; 28.1 2.8E+02 0.006 34.2 9.3 24 183-206 143-166 (1355)
305 PF04281 Tom22: Mitochondrial 26.2 1E+02 0.0022 27.6 4.1 25 460-484 60-84 (137)
306 cd02432 Nodulin-21_like_1 Nodu 24.0 5.4E+02 0.012 24.8 9.1 74 18-100 136-209 (218)
307 TIGR02230 ATPase_gene1 F0F1-AT 22.7 2.8E+02 0.006 23.3 5.8 35 60-94 51-85 (100)
308 PF07099 DUF1361: Protein of u 21.8 4.1E+02 0.0088 24.5 7.5 54 21-74 25-84 (168)
309 TIGR01667 YCCS_YHJK integral m 20.2 6.9E+02 0.015 28.8 10.4 54 70-146 42-98 (701)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-45 Score=400.87 Aligned_cols=537 Identities=49% Similarity=0.784 Sum_probs=481.8
Q ss_pred CcccccCCCCCCC---chh----------hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHH
Q 008450 7 DAVDYKGSPADPS---KTG----------IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGF 73 (565)
Q Consensus 7 ~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~ 73 (565)
+.+|+.+.+...+ ++. .|.+||+++||+..|+..|++.++|.+..++...++.+...+...++++++
T Consensus 16 ~~~d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~ 95 (571)
T KOG1237|consen 16 TSVDYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAF 95 (571)
T ss_pred ceeeccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4567777777775 444 899999999999999999999999999999999999999999999999999
Q ss_pred HhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC-CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhh
Q 008450 74 LADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC-KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSG 152 (565)
Q Consensus 74 laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~ 152 (565)
++|.|+||.+++.++.++..+|..+...+..+|.+.+..| -.+++..|+.+...+...++.++.+.++|.|+..|+..+
T Consensus 96 laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~ 175 (571)
T KOG1237|consen 96 LADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLA 175 (571)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchh
Confidence 9999999999999999999999999999999999998887 344455799999999999999999999999999999999
Q ss_pred hhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCC
Q 008450 153 FGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSG 232 (565)
Q Consensus 153 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (565)
+.+|++++.++++++.+.+.++|++...++|..++..+..++++..||.+.|.++.+..++++++++...+.+++++|.+
T Consensus 176 fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~g 255 (571)
T KOG1237|consen 176 FGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRG 255 (571)
T ss_pred hcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCC
Confidence 99999998887788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhH
Q 008450 233 SPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKM 312 (565)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (565)
+|...+.+++..+.++++...+.+++............+++++.++++++++..+.+...+....+|+.|..+++++.|.
T Consensus 256 sp~t~i~~Vlvaa~~k~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~ 335 (571)
T KOG1237|consen 256 SPKTRIGQVLVAAAFKRKAVVSLDPEELYYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKA 335 (571)
T ss_pred CchhHHHHHHHHHHHHHhccCCCcchhccccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhh
Confidence 99999999999999998887776644431111112334557788999999888766554455678899999999999999
Q ss_pred HHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccc-cccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCC-CC
Q 008450 313 VARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGR-FQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKP-GF 390 (565)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~-~~ 390 (565)
.++.++++...++++..+.|..+.++.|...++...++ +.+|+..+..+..+..++..|++++++.|+.+|..+++ ..
T Consensus 336 ~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~ 415 (571)
T KOG1237|consen 336 VLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGI 415 (571)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCC
Confidence 99999999999999999999999999999999999987 99999999999999999999999999999999998876 78
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhH
Q 008450 391 TNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKT 470 (565)
Q Consensus 391 ~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg 470 (565)
+.++++.+|+.+..+++...+..+..|.+.... ..+.+++++..|.++++++.|++|.+...+..++..+.+|++||+
T Consensus 416 t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~--~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS 493 (571)
T KOG1237|consen 416 TPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS--LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKS 493 (571)
T ss_pred ChhheeeccchHHHHHHHHHHHHHHHHhhhhhh--ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHH
Confidence 999999999999999999999999888776543 113346899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccc-cccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCCc
Q 008450 471 MSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLA-DNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPK 547 (565)
Q Consensus 471 ~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~~ 547 (565)
.+++++.....+|+.++..+.+.+...+++ ..+|++ +++|.++...+||+++.+..++.+.++++.++++.++.+
T Consensus 494 ~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 494 VATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 999999999999999999999998766543 468999 999999999999999999999999999999888776643
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-38 Score=326.64 Aligned_cols=461 Identities=21% Similarity=0.307 Sum_probs=349.9
Q ss_pred ccCCCCCCCchh-hHHHHHHHhHHHHHHHHHHhhhcCC----CCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHH
Q 008450 11 YKGSPADPSKTG-IELCERLSTMGIAVNLVTYLVGTMH----LPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTI 85 (565)
Q Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~yl~~~l~----~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~ 85 (565)
.++||+...--+ +|+|||++|||+...+..|+...++ ++.+++.-+.+.|.....++++++||+|||++|+|+++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 355666555444 9999999999999999999999888 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHh
Q 008450 86 AIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE 165 (565)
Q Consensus 86 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 165 (565)
..+.+++++|.++++... ......++++.++.++|+|.++|+..++++|++|++|++
T Consensus 96 ~lGail~~iGh~~L~~~~----------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr- 152 (498)
T COG3104 96 VLGAILMAIGHLVLAISS----------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR- 152 (498)
T ss_pred HHHHHHHHHHHHHHhccc----------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-
Confidence 999999999999998872 013667999999999999999999999999999999976
Q ss_pred hhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccC--CCCCchH------H
Q 008450 166 KTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKK--SSGSPIV------H 237 (565)
Q Consensus 166 ~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~ 237 (565)
|...++++|+..|+|++++|++.+++.+.+||...|.+.++-+..+++.++..+++...+. ++..+.. .
T Consensus 153 ---rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~ 229 (498)
T COG3104 153 ---RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPV 229 (498)
T ss_pred ---cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhh
Confidence 8999999999999999999999999999999999999999999999999888876654433 2211211 1
Q ss_pred HHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHh-hcCCCCCCCCCCCCccccchhhHhHhHHHhH
Q 008450 238 IFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIV-AEGDFEAGSTPNPWKLCSVTSVEEVKMVARL 316 (565)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (565)
...++....+.- ++ .....+..+.......+ ...... .+...+ .+.. .+||+++..
T Consensus 230 ~~~~~~~~~~~~----------~~-------~~l~~~~~~~~~~~~~i~~~~~~~--~~~~~~---~~~~-~er~r~~~~ 286 (498)
T COG3104 230 LGGLVVMILAAL----------LT-------LLLNQNTFSGVLLVISILIAIIYF--AEAFRS---PKVF-DERRRLLAA 286 (498)
T ss_pred HHHHHHHHHHHH----------HH-------HHHHHHHHHHHHHHHHHHHHHHHH--HHHhcc---CccH-HHHHHHHHH
Confidence 111111111100 00 00000000000000000 000000 000011 1222 688999999
Q ss_pred HHHHHHHHHHHhhhcccchhhhhhh-hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhH
Q 008450 317 LPIWATTIIFWTTYAQMITFSVEQA-TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQR 395 (565)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~ 395 (565)
+++++...++|+.+.|..+.+..+. ...+.+..++.+++++++++|.+.+++++|+..++..|+.++.+ .++...+
T Consensus 287 ~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~---~ps~~~K 363 (498)
T COG3104 287 IPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNK---QPSTPIK 363 (498)
T ss_pred HHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCC---CCCcchH
Confidence 9999999999999999998765554 33444445688999999999999999999999999999777642 5788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHH
Q 008450 396 MAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL 475 (565)
Q Consensus 396 l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl 475 (565)
+.+|++++..+++.+........ +.+...|.+|+++.+++.++||.+..|...+++++.+|+.+++..+|+
T Consensus 364 FalGl~l~g~~fl~l~~~~~~~~---------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~ 434 (498)
T COG3104 364 FALGLILAGLGFLILLLAGIWFG---------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAM 434 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc---------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHH
Confidence 99999999999998877632210 113368999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 476 FLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 476 ~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
+.+.+..|..++..+.+.-.. +. +.........+|+..+..+++.....+...++.+
T Consensus 435 wfLt~a~~~~l~g~va~~~~~-~~---------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~ 491 (498)
T COG3104 435 WFLTVAAGQTLGGQVAGLTAV-TD---------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLN 491 (498)
T ss_pred HHHHHHHHHHhhceecccccc-cc---------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHH
Confidence 999999999998888873211 00 0001122345688888888777777666666543
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=2.4e-35 Score=320.41 Aligned_cols=464 Identities=19% Similarity=0.274 Sum_probs=329.0
Q ss_pred ccccCCCCCCCch-hhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHH
Q 008450 9 VDYKGSPADPSKT-GIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI 87 (565)
Q Consensus 9 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 87 (565)
.+.++||...-.. ++|++||+++|++..++++|+++++|++..+.+++.+.|.....+..+++|+++||++||||++++
T Consensus 7 ~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~ 86 (489)
T PRK10207 7 MGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVL 86 (489)
T ss_pred cchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHH
Confidence 4455677665554 399999999999999999999999999999999999999999999999999999993399999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhh
Q 008450 88 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 167 (565)
Q Consensus 88 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (565)
+.+++.+++++++++.+ ....++++|+++|+|.|...|+..++++|++|+++++
T Consensus 87 g~~~~~~g~~~~~~~~~-----------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~--- 140 (489)
T PRK10207 87 GAIVLAIGYFMTGMSLL-----------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR--- 140 (489)
T ss_pred HHHHHHHHHHHHHHhcc-----------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh---
Confidence 99999999999988732 1234668999999999999999999999999987632
Q ss_pred hhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcccccccc--CCCCCchHHHHHHH---
Q 008450 168 QMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK--KSSGSPIVHIFQVI--- 242 (565)
Q Consensus 168 ~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--- 242 (565)
|+++++++++..|+|.++||.+++++.++.|||+.|++.++..+++++.+...+++.+++ +|++++.+.....+
T Consensus 141 -~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 219 (489)
T PRK10207 141 -LDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLL 219 (489)
T ss_pred -hhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHH
Confidence 688999999999999999999999999999999999998766666665555555444332 22222221111000
Q ss_pred ----HHHHHhccccCCCCcCccccCCccccccCCCcchhH-HhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHH
Q 008450 243 ----VAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHF-LDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLL 317 (565)
Q Consensus 243 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (565)
......... +....... ......+....+...+. +.++ .++++.+..+
T Consensus 220 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~~~f~~~~~-------~~~~-~~r~r~~~~~ 272 (489)
T PRK10207 220 GSVVMIFVCAWLM-------------------HNVEVANLVLIVLSIVVTIIFFREAF-------KLDK-TGRNKMFVAF 272 (489)
T ss_pred HHHHHHHHHHHHH-------------------hhhhHHHHHHHHHHHHHHHHHHHHHh-------cCCH-HHHHHHHHHH
Confidence 000000000 00000000 00000000000000000 1112 2344555556
Q ss_pred HHHHHHHHHHhhhcccchhhhhhhh-cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHH
Q 008450 318 PIWATTIIFWTTYAQMITFSVEQAT-TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM 396 (565)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l 396 (565)
.++....++|+.+.|..+.+..+.. ..+....++.+++.+++.+|.+..++..|+.+++.+++.+|.. .++...++
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~---~~~~~~k~ 349 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGK---DLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCC---CCCcHHHH
Confidence 6677788889999988665443332 3455555778888899999999999999999998777766633 46788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHH
Q 008450 397 AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF 476 (565)
Q Consensus 397 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~ 476 (565)
.+|+++.+++++.+....... . +.+...+.+|+++.+++.++||.+..|..++++.+.+|++++|.++|++
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~---~------~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~ 420 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWF---A------DAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---c------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHH
Confidence 999999999987664332100 0 0011456788899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 008450 477 LTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPK 544 (565)
Q Consensus 477 ~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~ 544 (565)
++..++|+.+|..++..... .. ...++. ...+.+.++|...++.+++..+++++..++.++.
T Consensus 421 ~l~~~ig~~lg~~l~~~~~~-~~-~~~~~~----~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~ 482 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFTAV-PD-NITDPL----ETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRM 482 (489)
T ss_pred HHHHHHHHHHHHHHHHHhcc-cc-ccccch----hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998875531 00 000010 0112356788888888888888887777665433
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=5.7e-34 Score=309.21 Aligned_cols=451 Identities=19% Similarity=0.269 Sum_probs=324.8
Q ss_pred ccCCCCCCCch-hhHHHHHHHhHHHHHHHHHHhhhc--CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHH
Q 008450 11 YKGSPADPSKT-GIELCERLSTMGIAVNLVTYLVGT--MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI 87 (565)
Q Consensus 11 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~yl~~~--l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 87 (565)
++++|.....- ..|++||+++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++||++|||+++.+
T Consensus 5 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~ 84 (475)
T TIGR00924 5 FFGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVL 84 (475)
T ss_pred ccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHH
Confidence 34555544332 289999999999999999999987 999999999999999999999999999999993399999999
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhh
Q 008450 88 FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKT 167 (565)
Q Consensus 88 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 167 (565)
+.++.+++.++++++++ .+.++++|++.|+|.|+..|+..++++|++|++++ .
T Consensus 85 ~~~~~~~g~~~~~~~~~------------------------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~ 137 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIY------------------------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---P 137 (475)
T ss_pred HHHHHHHHHHHHHhccc------------------------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---c
Confidence 99999999998887622 56788899999999999999999999999987652 1
Q ss_pred hhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchH----HHHHH--
Q 008450 168 QMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIV----HIFQV-- 241 (565)
Q Consensus 168 ~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-- 241 (565)
+|+++++++++..|+|.++||.+++++.+.+||++.|.+.++..+++++.+...++.+++.++++++.+ +..+.
T Consensus 138 ~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (475)
T TIGR00924 138 RRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLL 217 (475)
T ss_pred cccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHH
Confidence 288899999999999999999999999999999999999887766666665555544433222221111 00000
Q ss_pred -----HHHHHHhccccCCCCcCccccCCccccccCCCcchhH-HhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHh
Q 008450 242 -----IVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHF-LDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVAR 315 (565)
Q Consensus 242 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (565)
+....+......+.. ..+.... ...+..+... . ....+ +.+. .++++...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~-~---~~~~~----~~~~-~~~~~~~~ 273 (475)
T TIGR00924 218 ALLAALALVFFCAWLMHHVV---------------IANILLMTVTLAVIIFFF-R---LAFKP----RLDA-VARNKMYA 273 (475)
T ss_pred HHHHHHHHHHHHHHHHhccH---------------HHHHHHHHHHHHHHHHHH-H---HHHhc----cCCH-HHHhHHHH
Confidence 000000000000000 0000000 0000000000 0 00000 1111 22344445
Q ss_pred HHHHHHHHHHHHhhhcccchhh-hhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchh
Q 008450 316 LLPIWATTIIFWTTYAQMITFS-VEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQ 394 (565)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~ 394 (565)
.+++++...++|+.+.|..+.+ ..+...++...+++.+++++++++|.+..++..|+.+++..++.+|.. .++...
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~---~~~~~~ 350 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGK---DPTTPL 350 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCC---CCCcHH
Confidence 6778888899999999988754 344455677777888999999999999999999999887666555421 346666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHH
Q 008450 395 RMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTG 474 (565)
Q Consensus 395 ~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~g 474 (565)
++.+|+++.+++++.+++.... . +.+...+++|+++++++.++||.+..|..++++.+.+|+++||+++|
T Consensus 351 k~~~G~~l~~~~~~~~~~~~~~----~------~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g 420 (475)
T TIGR00924 351 KFTLGMLFCGASFLTFAASIWF----A------DAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLG 420 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----c------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHH
Confidence 7899999999999888765211 0 11125789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 475 LFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 475 l~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
++.....+|..+++.+....... .+ ....|...++++++..++++...+..
T Consensus 421 ~~~l~~~~g~~l~~~~~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (475)
T TIGR00924 421 MWFLAQAMGSLLGGYLATFGAVP------QG----------VTGVFGKIGLVTLLVGVVMALMVPWL 471 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc------cc----------hhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888754210 11 24567777777777777776666554
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=7.4e-33 Score=297.66 Aligned_cols=450 Identities=18% Similarity=0.249 Sum_probs=317.0
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.|++||+++|++...++.|+++.+|++..+.+.+.+.+.....++++++|+++||++||||++.++.++.+++.++++..
T Consensus 17 ~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~ 96 (493)
T PRK15462 17 LQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS 96 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999998899999999999999998777643
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.. ....++++..+.++|.|...++.+++++|++|+++++ |.++++++++..|+
T Consensus 97 ~~-----------------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i~Y~~~nl 149 (493)
T PRK15462 97 EI-----------------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSLMYAAGNV 149 (493)
T ss_pred hc-----------------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehHHHHHHHH
Confidence 11 1233555666677888999999999999999987533 89999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcccccccc---CCCCCchHHHHH-----HHHH-----HHHhc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK---KSSGSPIVHIFQ-----VIVA-----AIKKR 249 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----~~~~-----~~~~~ 249 (565)
|+.++|.+.+++.+.+||++.|.+.++..+++++.++..+++..+. +|+..+.++... +... .+...
T Consensus 150 G~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (493)
T PRK15462 150 GSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITV 229 (493)
T ss_pred HHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998877777766666555443321 111111011000 0000 00000
Q ss_pred cccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhh
Q 008450 250 KMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTT 329 (565)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (565)
.. ........+-........... + ....+ ...++||++..++.++....+||+.
T Consensus 230 ~~-------------------~~~~~~~~~~~~~~~~~~~~~---~---~~~~~-~~~~er~r~~~~~~l~~~~~~Fw~~ 283 (493)
T PRK15462 230 LF-------------------WKEWSVYALIVATIIGLGVLA---K---IYRKA-ENQKQRKELGLIVTLTFFSMLFWAF 283 (493)
T ss_pred HH-------------------HHHHHHHHHHHHHHHHHHHHH---H---HHHhc-CCHHHHhhHHHHHHHHHHHHHHHHH
Confidence 00 000000000000000000000 0 00001 1235678888889999999999999
Q ss_pred hcccchhhh-hhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHH
Q 008450 330 YAQMITFSV-EQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMA 408 (565)
Q Consensus 330 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~ 408 (565)
+.|.++.+. ....+.+.++.++.+|+++++++|.+.+++.+|+..++..++.+|.+ .++...++.+|+++.+++++
T Consensus 284 ~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~---~~s~~~Kfa~g~~~~g~~f~ 360 (493)
T PRK15462 284 AQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAGNR---TVRIWGKFALGLGLMSAGFC 360 (493)
T ss_pred HHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCC---CCCcHHHHHHHHHHHHHHHH
Confidence 999987553 33466788888999999999999999999999999998666544311 46788889999999999999
Q ss_pred HHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHH-HHHHHHh
Q 008450 409 AAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTL-SLGFFVS 487 (565)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~-~lg~~ig 487 (565)
++.+..... +.++ ..+++|++..+++.++||.+..|...+++++.+|++.||+.+|++.... .+|..++
T Consensus 361 ~l~~~~~~~----~~~~------~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~ 430 (493)
T PRK15462 361 ILTLSARWS----AMYG------HSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLA 430 (493)
T ss_pred HHHHHHhhc----CCCC------CcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887654321 1111 4788999999999999999999999999999999999999999997744 6777777
Q ss_pred hHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHH--HHHHhhhhhhcC
Q 008450 488 SFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIIN--LVIYLICAVWYK 542 (565)
Q Consensus 488 ~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~--~~~~~~~~~~~~ 542 (565)
+.+.+.......+ +-...+-....+...|...+..+++. ++++.+.++..|
T Consensus 431 g~~~~~~~~~~~~----~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 483 (493)
T PRK15462 431 GVIADQTSQASFD----ASGAINYSINAYIEVFDQITWGALACVGVVLMIWLYQALK 483 (493)
T ss_pred HHHHHHhccccCC----ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766654211000 00000001123556677766666554 444444554443
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=1.8e-32 Score=299.21 Aligned_cols=457 Identities=19% Similarity=0.264 Sum_probs=320.2
Q ss_pred cccCCCC-CCCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHH
Q 008450 10 DYKGSPA-DPSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIF 88 (565)
Q Consensus 10 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 88 (565)
+.+++|. ...-...|+|||+++|++..+++.|+++++|++..+.+++.+.+........+++|+++||++|||+++.++
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g 94 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLG 94 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 3345554 333334999999999999999999999999999999999999988888888889999999933999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhh
Q 008450 89 AAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 168 (565)
Q Consensus 89 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (565)
.++..++..+++++.+ ....++++|+++|+|.|...|+..++++|++|+++++
T Consensus 95 ~~~~~ig~~l~~~~~~-----------------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~---- 147 (500)
T PRK09584 95 AIVLAIGYALVAWSGH-----------------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR---- 147 (500)
T ss_pred HHHHHHHHHHHHHhcc-----------------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----
Confidence 9999999888887621 2456778999999999999999999999999876532
Q ss_pred hcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcccccccc--CCCCCchHH--HHH----
Q 008450 169 MAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK--KSSGSPIVH--IFQ---- 240 (565)
Q Consensus 169 r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~---- 240 (565)
|+.+++++++..|+|.++||+++|++.+++|||+.|.+.++..+++++.+....+..+++ +|++++.+. ...
T Consensus 148 ~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (500)
T PRK09584 148 LDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVG 227 (500)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHH
Confidence 667899999999999999999999999999999999998876666555544443333222 222222111 100
Q ss_pred H-HHHHHHhccccCCCCcCccccCCccccccCCCcchh-HHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHH
Q 008450 241 V-IVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFH-FLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLP 318 (565)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (565)
. ........... ..+... .............. .. ..+.+ ..++++....+.
T Consensus 228 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~-~~~~~~~~~~~~ 280 (500)
T PRK09584 228 VVALIAIATWLLH-------------------NQEIARMALGVVALGIVVIFG----KE---AFAMK-GAARRKMIVAFI 280 (500)
T ss_pred HHHHHHHHHHHHh-------------------cchHHHHHHHHHHHHHHHHHH----HH---HhhcC-HHHHHHHHHHHH
Confidence 0 00001000000 000000 00000000000000 00 00111 234555556677
Q ss_pred HHHHHHHHHhhhcccchhhhhhhh-cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHH
Q 008450 319 IWATTIIFWTTYAQMITFSVEQAT-TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMA 397 (565)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~ 397 (565)
+++...++|+.+.|.++.+..+.. ..+..+.++.+++++++++|.+..++..|+.+++..++.+| .+..+++.
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r------~~~~~~~~ 354 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDR------LPMPHKFA 354 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcC------CCcHHHHH
Confidence 778889999999999887765543 34555667788899999999999999999998875444333 45678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHH
Q 008450 398 IGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL 477 (565)
Q Consensus 398 ~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~ 477 (565)
+|+++++++++.+....... +.....+.+|+++.+++.++||.+..|...+++.+.+|+++||+++|++.
T Consensus 355 ~G~~l~~l~f~~l~~~~~~~----------~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 355 IGMVLCSGAFLVLPLGAKFA----------NDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhc----------CCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 99999999999887653210 01124677799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHhhhhhhcccCCCCCCcccccc-ccchhhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 008450 478 TTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNI-NRGRLDLFYGLLAILSIINLVIYLICAVWYKP 543 (565)
Q Consensus 478 ~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~-~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~ 543 (565)
+...+|+.+++.+.+.... .. -..+.. ..+.+...|..+++++++..++.+...++.++
T Consensus 425 l~~a~g~~~~g~~~~~~~~-~~------~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 425 LTTAGAALIAGYVANLMAV-PD------NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHhcc-cc------ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888764321 00 000000 11235677888888887777776666665443
No 7
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.94 E-value=3.3e-24 Score=227.42 Aligned_cols=368 Identities=13% Similarity=0.072 Sum_probs=243.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..+...++.....+.++.|+.+++|.|..+.+++.+++.++..++.++.|+++||+ ||||++.++.++..++.+.++++
T Consensus 23 ~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~ 101 (399)
T PRK05122 23 FTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCALSGLLYLLA 101 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHHHHHHHHHHh
Confidence 45555566666777888899999999999999999999999999999999999999 99999999999988887776654
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
...++ ....+...+++.|+++|+|.+...+....++.|+.|+++ |++++++.....++
T Consensus 102 ~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~ 159 (399)
T PRK05122 102 GLLAA----------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNGIATYG 159 (399)
T ss_pred hhhhc----------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhhhhhhH
Confidence 21111 011246789999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|.++|+.+++++.+..||++.+++..+..++.++.. ...+ ++++++++..+
T Consensus 160 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~------------------------- 210 (399)
T PRK05122 160 ALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRP---AVPPVKGERLP------------------------- 210 (399)
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCC---CCCCCCccchh-------------------------
Confidence 999999999999999999998887665544332221 1111 11110000000
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
+.+ ..++.+... .........+..... ....+..+ .
T Consensus 211 ---------------~~~-------------------------~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~-~ 246 (399)
T PRK05122 211 ---------------FRR-------------------------VLGRVWPYG--MGLALASIGFGTIAT-FITLYYAA-R 246 (399)
T ss_pred ---------------HHH-------------------------HHHHHHHHH--HHHHHHHHHHHHHHH-HHHHHHHH-c
Confidence 000 000000000 001111111111111 11111111 1
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
+.+ ..........+..++...+.+++.|+..+| +.+..+.++..+++..+...
T Consensus 247 ~~~--------~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~----------~~~~~~~~~~~~~~~~~~~~--------- 299 (399)
T PRK05122 247 GWD--------GAALALTLFGVAFVGARLLFGNLINRLGGL----------RVAIVSLLVEILGLLLLWLA--------- 299 (399)
T ss_pred ccc--------cchHHHHHHHHHHHHHHHHHHHHHHHhccH----------HHHHHHHHHHHHHHHHHHHh---------
Confidence 110 112222333444455556666665554332 23556666666666555432
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
.+.+..++..++.+++.+..++.......+..|++.||+++|+++....+|..+++.+.+.+.+..
T Consensus 300 ----------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---- 365 (399)
T PRK05122 300 ----------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF---- 365 (399)
T ss_pred ----------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 234455667788999998888888888889999999999999999999999999999888775321
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
++...|++.+++.+++.++.+...+
T Consensus 366 ------------g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 366 ------------GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred ------------CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1456777888877777766555433
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=2.2e-24 Score=228.30 Aligned_cols=351 Identities=15% Similarity=0.086 Sum_probs=237.2
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
+.+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+.++..+++++++++++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------------- 96 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFIASHVLSALAWN------------- 96 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 34667889999999999999999999999999999999999 9999999999999999999988733
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE 197 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~ 197 (565)
++.++++|+++|++.+...+...+++.|++|+++ |++++++.....++|.++||.+++.+.+.
T Consensus 97 -----------~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~~~~~~~g~~ig~~l~~~l~~~ 159 (390)
T PRK03545 97 -----------FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLLATGTALAMVLGLPLGRVIGQY 159 (390)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 7889999999999999999999999999999888 99999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchh
Q 008450 198 ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFH 277 (565)
Q Consensus 198 ~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (565)
+|||+.|++.+++.++..+..+...|+.++++ +++.++ ...
T Consensus 160 ~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~----~~~--------------------------------- 200 (390)
T PRK03545 160 LGWRTTFLAIGGGALITLLLLIKLLPLLPSEH--SGSLKS----LPL--------------------------------- 200 (390)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cchHHH----HHH---------------------------------
Confidence 99999999988776655444443322211100 000000 000
Q ss_pred HHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcch
Q 008450 278 FLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGS 357 (565)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (565)
..++++........+......+......+ .+.....+.+. ...+.
T Consensus 201 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~g~s~------~~~~~ 245 (390)
T PRK03545 201 ----------------------------LFRRPALVSLYLLTVVVVTAHFTAYSYIE-PFVQQVAGLSE------NFATL 245 (390)
T ss_pred ----------------------------HHhCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCCc------cHHHH
Confidence 00111111111111111111122111111 11111111111 11233
Q ss_pred hhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehh
Q 008450 358 LTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFL 437 (565)
Q Consensus 358 ~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 437 (565)
......+..++...+.+++.||..+| .+..+..+..++...+... ..+.+.
T Consensus 246 ~~~~~~~~~~~g~~~~g~l~dr~~~~-----------~~~~~~~~~~~~~~~l~~~------------------~~~~~~ 296 (390)
T PRK03545 246 LLLLFGGAGIIGSVLFSRLGNRHPSG-----------FLLIAIALLLVCLLLLLPA------------------ANSEWH 296 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchh-----------HHHHHHHHHHHHHHHHHHH------------------hchHHH
Confidence 33444455566666666665543322 2444444444444333221 223445
Q ss_pred hHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhh
Q 008450 438 LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLD 517 (565)
Q Consensus 438 li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~ 517 (565)
+++..++.|++.....+.....+.+..| +.|++++|+++....+|..+|+.+.+.+.+.. ++.
T Consensus 297 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~----------------g~~ 359 (390)
T PRK03545 297 LSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL----------------GLS 359 (390)
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------Chh
Confidence 5667788888887777777888888877 57899999999999999999999999886422 135
Q ss_pred HHHHHHHHHHHHHHHHHhhhhh
Q 008450 518 LFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 518 ~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
..|++.+++.+++++.++...+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 360 SIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcc
Confidence 6678888888888877666653
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.9e-24 Score=220.86 Aligned_cols=356 Identities=14% Similarity=0.141 Sum_probs=253.8
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
-+.+-+.+++|.|..++|++++.|.++..++.|+...+.||+ .||++++..+.+++++.++++++ |+
T Consensus 34 gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~lFi~~n~l~alA---p~--------- 100 (394)
T COG2814 34 GLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLALFIVSNLLSALA---PS--------- 100 (394)
T ss_pred hchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHHHHHHHHHHHHh---cc---------
Confidence 344567899999999999999999999999999999999999 99999999999999999999999 33
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
++.++++|++.|+..|.+.+...++.++..|+++ |+++.++...+..++.++|.++|.++.+
T Consensus 101 ------------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aiaiv~~G~tlA~v~GvPLGt~ig~ 162 (394)
T COG2814 101 ------------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALALVFTGLTLATVLGVPLGTFLGQ 162 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 8999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhccc-cccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcc
Q 008450 197 EISRSVGYGICSVAMFMAIIIFLAGTK-RYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQ 275 (565)
Q Consensus 197 ~~gw~~~f~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (565)
.+|||..|++.+++.+++++..+...| +...+++ +.+..+..+.
T Consensus 163 ~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~-~~~~~~~~~~---------------------------------- 207 (394)
T COG2814 163 LFGWRATFLAIAVLALLALLLLWKLLPPSEISGSL-PGPLRTLLRL---------------------------------- 207 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCC-CcchhHHHHH----------------------------------
Confidence 999999999999888888777777666 1111111 0111110000
Q ss_pred hhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCc
Q 008450 276 FHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPA 355 (565)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (565)
.++.+....+....+....+++.|.+..+ +..+...++. ...
T Consensus 208 -------------------------------l~~p~v~~~l~~t~l~~~g~F~~ftYi~P-~L~~v~g~s~------~~v 249 (394)
T COG2814 208 -------------------------------LRRPGVLLGLLATFLFMTGHFALYTYIRP-FLESVAGFSV------SAV 249 (394)
T ss_pred -------------------------------hcCchHHHHHHHHHHHHcchhhhHHhHHH-HHHHccCCCH------hHH
Confidence 01112222222222333333333332222 2222222221 123
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
++......+...+...+.+++.|+ .. .+.+.....+..+.++.+.+. ..+.
T Consensus 250 s~~Ll~~Gv~~~~Gn~~gGrl~dr-~~----------~~~l~~~~~l~a~~~l~l~~~------------------~~~~ 300 (394)
T COG2814 250 SLVLLAFGIAGFIGNLLGGRLADR-GP----------RRALIAALLLLALALLALTFT------------------GASP 300 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhccc-cc----------hhHHHHHHHHHHHHHHHHHHh------------------cchH
Confidence 445555666667777777777555 21 233555656666666665554 3344
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccch
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGR 515 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~ 515 (565)
+..+...++.+++........+.-..+..| +.+..+++++....++|..+|..+++.+.+. .+
T Consensus 301 ~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p-~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~----------------~g 363 (394)
T COG2814 301 ALALALLFLWGFAFSPALQGLQTRLARLAP-DAADLAGSLNVAAFNLGIALGAALGGLVLDA----------------LG 363 (394)
T ss_pred HHHHHHHHHHHHHhhhhhhHHHHHhcccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------hc
Confidence 455555666666655555555555555444 5599999999999999999999999998642 12
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 516 LDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 516 ~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
+....++.+++.++++++.+...+..+
T Consensus 364 ~~~~~~~~a~l~~~a~~~~~~~~~~~~ 390 (394)
T COG2814 364 YAATGWVGAALLLLALLLALLSARKDR 390 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 466788888888888888777665543
No 10
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=1.1e-23 Score=222.88 Aligned_cols=366 Identities=11% Similarity=0.096 Sum_probs=238.2
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..++.....+.++.|+.+++|.|..+.+++.+.+.++..+++++.|+++||+ ||||++.++.+...++.+.....
T Consensus 23 ~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~ 101 (392)
T PRK12382 23 AVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACGLAGLAYLLA 101 (392)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHHHHHHHHHhh
Confidence 44444445455556677788999999999999999999999999999999999999 99999999988777765544332
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
...+. ....+++.++++|+++|+|.+...+...+++.|.+|+++ |++++++.....++
T Consensus 102 ~~~~~----------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~~~~~~~~~ 159 (392)
T PRK12382 102 AILPV----------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMSWNGMAMYG 159 (392)
T ss_pred hcccc----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhhHHHHHHHH
Confidence 11111 011357889999999999999999999999999999888 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|.++||.+++++.+.+||++.+.+..+..++.+.. . ++.++++++++...+
T Consensus 160 g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~------------------------- 210 (392)
T PRK12382 160 ALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF---N-GTVRKVPAHAGERPS------------------------- 210 (392)
T ss_pred HHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH---H-HhccCCCCCcccCch-------------------------
Confidence 99999999999999899998777654443322221 1 111111110000000
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
..+. .+.... ..+. .......+... ......+..+.
T Consensus 211 ---------------~~~~----------------------~~~~~~-~~~~----~~l~~~~~~~~-~~~~~~~~~~~- 246 (392)
T PRK12382 211 ---------------LWSV----------------------VGLIWK-PGLG----LALQGVGFAVI-GTFVSLYFASK- 246 (392)
T ss_pred ---------------HHHH----------------------HHHHHH-hHHH----HHHHHHHHhHH-HHHHHHHHHhc-
Confidence 0000 000000 0000 00111111111 11111111110
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
.. . ..........+..++..++.+++.|++.+| +.+..+..+..+++....+.
T Consensus 247 ~~-------~-~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~----------~~~~~~~~~~~~~~~~~~~~--------- 299 (392)
T PRK12382 247 GW-------A-MAGFTLTAFGGAFVLMRVLFGWMPDRFGGV----------KVAIVSLLVETVGLLLLWLA--------- 299 (392)
T ss_pred CC-------c-hhHHHHHHHHHHHHHHHHHHHHHHHhcCCC----------eehHHHHHHHHHHHHHHHHc---------
Confidence 00 0 112222333444555667777776655543 22455666666666554432
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
.+.+...+..++.+++.+...+.......+..|++.||++.|++++...+|..+++.+.+.+.+..
T Consensus 300 ----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---- 365 (392)
T PRK12382 300 ----------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF---- 365 (392)
T ss_pred ----------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 233445567788888888888888888889999999999999999999999999999999876421
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHhhh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
+ +...|.+.+++.+++.++.+..
T Consensus 366 --g----------~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 366 --G----------YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred --C----------chHHHHHHHHHHHHHHHHHHhh
Confidence 2 3567788888888877766544
No 11
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.93 E-value=7.4e-24 Score=221.73 Aligned_cols=384 Identities=16% Similarity=0.118 Sum_probs=237.6
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
...+...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++..+++++.
T Consensus 11 ~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~--------- 80 (399)
T TIGR00893 11 ANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFAG--------- 80 (399)
T ss_pred HhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHHc---------
Confidence 3445566778899999999999999999999999999999999999 999999999999999999988873
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
+++.++++|++.|++.+...+....++.|++|+++ |++++++.....++|.++++.+++
T Consensus 81 ---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 81 ---------------AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred ---------------CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHH
Confidence 27889999999999999999999999999999988 999999999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCC
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHH 272 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (565)
++.+..+||+.|++.++..++..+..+...++.+++ ++..+.++ ++... +..... .....
T Consensus 140 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------~~~~~--~~~~~~--------~~~~~ 199 (399)
T TIGR00893 140 WILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK-AKWLTEEE---------KYIVV--GGLLAE--------QQGKG 199 (399)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCc-cccCCHHH---------Hhhcc--hhhccc--------ccccc
Confidence 999999999999988777665554444433322111 11111000 00000 000000 00000
Q ss_pred CcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccc
Q 008450 273 TEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQ 352 (565)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (565)
+....+.. ..+..++++........+...... ..+....+.+..+....+ .
T Consensus 200 ---------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~ 250 (399)
T TIGR00893 200 ---------------------PSTPKKYQ-IKELLKDRRVWGLALGQFLVNIGL-GFFLTWFPTYLVQERGLS------I 250 (399)
T ss_pred ---------------------ccCCCccc-hHHHhcCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHhccc------H
Confidence 00000000 001111222221111111111111 111111112222211111 1
Q ss_pred cCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHH---HHHHHHHHHHHhhhhhhcCCCCC
Q 008450 353 IPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVG---MAAAALVERKRLSVARAVGLTTA 429 (565)
Q Consensus 353 ~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 429 (565)
...+.......+..++..++.+++.|++.+|... +........++ .........
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-------------- 307 (399)
T TIGR00893 251 LEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKS---------LVFARKTAIIAGLVLSLLMFATN-------------- 307 (399)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc---------hhHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 1234455555666677778888887777766211 11111111111 111111100
Q ss_pred CcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccc
Q 008450 430 TLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLAD 509 (565)
Q Consensus 430 ~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~ 509 (565)
..+..+......+.+.+.....+..+.+..|.+|++.||+++|+.+.+..+|..+++.+.+.+.+..
T Consensus 308 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~----------- 374 (399)
T TIGR00893 308 --YVNIPYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT----------- 374 (399)
T ss_pred --cchhHHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-----------
Confidence 0112222333333333333367899999999999999999999999999999999999999875321
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhh
Q 008450 510 NINRGRLDLFYGLLAILSIINLVIYLI 536 (565)
Q Consensus 510 ~~~~~~~~~~f~~~a~l~lv~~~~~~~ 536 (565)
+.+...|++.+++.+++.+..+.
T Consensus 375 ----g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 375 ----GSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred ----CchhHHHHHHHHHHHHHHHHHHH
Confidence 11356677777777777666543
No 12
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.93 E-value=5.6e-24 Score=226.24 Aligned_cols=368 Identities=14% Similarity=0.129 Sum_probs=243.4
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..++++.+.+.++.|+++++|++..+.|.+.+.+.+...+..+++|+++||+ |||+++.++.++..++.+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~~~~~~ 96 (400)
T PRK11646 18 DNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFATMAIA 96 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHHHHHHh
Confidence 67788889999999999999999999999999999999999999999999999999 99999999999999999988776
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
+ +++.++++|+++|++.+...|...+++.|.+|+++ |++++++.+...++
T Consensus 97 ~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~~~~ 146 (400)
T PRK11646 97 H------------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQDSA 146 (400)
T ss_pred c------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 2 27778999999999999999999999999999888 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|..+||.+++++. .++|++.|++.++..++..++.....++.+. ++..++..+
T Consensus 147 g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~------------------------- 199 (400)
T PRK11646 147 GAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVRE------------------------- 199 (400)
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhHH-------------------------
Confidence 9999999999998 6899999998877665544333332222100 000000000
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
++ ....++++.................... ..+.+..+..
T Consensus 200 --------------~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~ 239 (400)
T PRK11646 200 --------------GM-------------------------TRVLRDKRFVTYVLTLTGYYMLAVQVML-MLPIMVNDIA 239 (400)
T ss_pred --------------HH-------------------------HHHHcCchHHHHHHHHHHHHHHHHHHHH-hhhhhHHhhc
Confidence 00 0001111211111111111111111111 1111211111
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
+ . ....+.+..+..+.........+++.+ | +.+..+.+..+.++..+++..++..
T Consensus 240 ~-~------~~~~g~l~~~~~~~~~~~~~~~~~~~~----~-----r~~~~~~~~~~~~~~~~~~~~l~~~--------- 294 (400)
T PRK11646 240 G-S------PSAVKWMYAIEACLSLTLLYPIARWSE----K-----RFRLEHRLMAGLLIMSLSMFPIGMV--------- 294 (400)
T ss_pred C-C------chHHHHHHHHHHHHHHHHHHHHHHHHH----H-----hcchhHHHHHHHHHHHHHHHHHHHh---------
Confidence 1 0 111222333333333322222233322 2 1122234566766677666655442
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
.+.+++++..++.+++.....|...+++.+.+|++.||+++|++++...+|..+|+.+.+.+.+..+..
T Consensus 295 ----------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~- 363 (400)
T PRK11646 295 ----------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKAL- 363 (400)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhc-
Confidence 123344555667788888888999999999999999999999999999999999999999987543210
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLVIYL 535 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~ 535 (565)
+.....|++.+++.+++.+...
T Consensus 364 -----------~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 364 -----------NQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred -----------CCcchHHHHHHHHHHHHHHHHH
Confidence 0112345566666666655543
No 13
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.93 E-value=3.1e-24 Score=238.41 Aligned_cols=335 Identities=30% Similarity=0.503 Sum_probs=271.3
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
++|||+..++.+|+.+.+|++.+++..+...+.....+.++++|+++|+++||++++.++.++..+|..+.++++. |..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 4789999999999999999999999999999999999999999999999999999999999999999998887532 220
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
.+..+....+++.++.++|.|+..|+..++.+|++++++ +++|.++++++++++|+|+++++
T Consensus 80 ---------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~ 141 (654)
T TIGR00926 80 ---------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLIST 141 (654)
T ss_pred ---------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHH
Confidence 011234557889999999999999999999999998654 23488899999999999999999
Q ss_pred HHHHHhcccc-------cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccc
Q 008450 189 TVLVYIQDEI-------SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 189 ~i~g~l~~~~-------gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (565)
++.+++.+.. +|.++|.++++.++++++++....+++++++|.+++..+..+.+....+++....+..
T Consensus 142 ~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~----- 216 (654)
T TIGR00926 142 IITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH----- 216 (654)
T ss_pred HHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc-----
Confidence 9999997443 6999999999999999888888888777777777766666666666665432211100
Q ss_pred cCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhh
Q 008450 262 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQA 341 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (565)
...++.+.+... ...+.++++|++++++++++...++|..+.|..+.+..|.
T Consensus 217 ------------~~~~~ld~a~~~----------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa 268 (654)
T TIGR00926 217 ------------WPLHWLDYAKDK----------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQA 268 (654)
T ss_pred ------------cchhHHHHhccc----------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 012233322110 0223467889999999999999999999999999988888
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR 417 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~ 417 (565)
..++..++++.+++.+++.++.+.+++..|+++..+.|..+|... .+++..++.+|++++.++++++...+...
T Consensus 269 ~~m~~~l~g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~--~ls~l~k~~iG~~la~la~~va~~ve~~~ 342 (654)
T TIGR00926 269 TRMDGDVGGFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGT--RFTSLRKMAVGGLLAALSFFVAALVQLKV 342 (654)
T ss_pred HHhcCccCCEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCC--CCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888777778889999999999999999999999877777766543 46788999999999999999998887554
No 14
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.93 E-value=7.7e-24 Score=226.18 Aligned_cols=394 Identities=13% Similarity=0.047 Sum_probs=244.2
Q ss_pred CCCCCCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHH
Q 008450 14 SPADPSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 93 (565)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 93 (565)
++....-...+++..++.......++.+ .++++.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~ 93 (417)
T PRK10489 16 HPAFRAVFIARFISIFGLGLLGVAVPVQ-IQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCG 93 (417)
T ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHH
Confidence 4444433345666666644444444444 567788999999999999999999999999999999 99999999888888
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhccee
Q 008450 94 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 173 (565)
Q Consensus 94 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (565)
++.++.+...-.+. .+.+.+++.|++.|++.+...+...+++.|..|+++ |+++.
T Consensus 94 ~~~~~~~~~~~~~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 148 (417)
T PRK10489 94 LGFIGLALNAFLPE-------------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAG 148 (417)
T ss_pred HHHHHHHHHHHcCC-------------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHH
Confidence 77766554211010 136778899999999999888999999999999887 99999
Q ss_pred ehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccC-CCCCchHHHHHHHHHHHHhcccc
Q 008450 174 SRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKK-SSGSPIVHIFQVIVAAIKKRKMD 252 (565)
Q Consensus 174 ~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
++.....++|..+||.+++++.+..+|++.|++.++..+++.++.+..++ .++++ ++.++..+..
T Consensus 149 ~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~------------- 214 (417)
T PRK10489 149 AITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA-LPPPPQPREHPLRSLL------------- 214 (417)
T ss_pred HHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC-CCCCCcccccchHHHH-------------
Confidence 99999999999999999999998889999999877666655444433221 11100 0000000000
Q ss_pred CCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcc
Q 008450 253 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 332 (565)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (565)
+.. ......+.+............... ...
T Consensus 215 ---------------------------~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 244 (417)
T PRK10489 215 ---------------------------AGF----------------------RFLLASPVVGGIALLGGLLTMASA-VRV 244 (417)
T ss_pred ---------------------------HHH----------------------HHHHcChHHHHHHHHHHHHHHHHh-HHH
Confidence 000 000011111111101011111111 111
Q ss_pred cchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008450 333 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 412 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~ 412 (565)
....+..+..+.+ ....+.+.....+..++...+.+++.+ |. .+.+.+..+.++..++++.+..
T Consensus 245 ~~p~~~~~~~g~~------~~~~g~~~~~~~~g~~ig~~~~~~l~~----~~------~~~~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 245 LYPALADEVWQMG------AAQIGLLYAAVPLGAALGALTSGWLAH----SA------RPGLLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred hhHHHHHhccCCC------hhHhHHHHHHHHHHHHHHHHHHHHhhh----cc------CcchHHHHHHHHHHHHHHHHHc
Confidence 1111222111111 111233344444455555555554432 21 1123355666666666655443
Q ss_pred HHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhh
Q 008450 413 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 492 (565)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~ 492 (565)
..+++...+..++.+++.+...+..++++.+..|++.||+++|+++....+|..+|+.+.+
T Consensus 309 -------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 309 -------------------MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred -------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 1233445667777888888777888899999999999999999999999999999999999
Q ss_pred hhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCCccc
Q 008450 493 VVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPKAG 549 (565)
Q Consensus 493 ~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~~~~ 549 (565)
.+.+..+ ....+...+++.++..++.+...+++|+++++|.
T Consensus 370 ~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (417)
T PRK10489 370 GLGAMMT----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPP 410 (417)
T ss_pred HHHHHhc----------------hhhHHHHHHHHHHHHHHHHHHhcccccccccccc
Confidence 8864221 2334555555555555555555566665554443
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.93 E-value=1.7e-23 Score=222.33 Aligned_cols=362 Identities=13% Similarity=0.070 Sum_probs=235.2
Q ss_pred HHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 35 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 35 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
.....+.+.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.++++++.
T Consensus 34 ~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~----------- 101 (406)
T PRK11551 34 AGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVALFGLFSLATAQAW----------- 101 (406)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHhc-----------
Confidence 34455667789999999999999999999999999999999999 999999999999988888887763
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
+++.+++.|++.|++.+...+...+++.|++|+++ |++++++.+...++|..+++.+++.+
T Consensus 102 -------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 102 -------------DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred -------------cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 27779999999999999999999999999999988 99999999999999999999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCc
Q 008450 195 QDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTE 274 (565)
Q Consensus 195 ~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (565)
.+..+|++.|++.+++.++..++.....++.+++++++...+ +
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-------------------------------------~ 205 (406)
T PRK11551 163 AGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGK-------------------------------------Q 205 (406)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcch-------------------------------------h
Confidence 888999999998776555444333332222111000000000 0
Q ss_pred chhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccC
Q 008450 275 QFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIP 354 (565)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (565)
.....+.. . +. .+.++........+......+....+.+ .+... .+.+ ...
T Consensus 206 ~~~~~~~~--~-----------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~-~g~s------~~~ 256 (406)
T PRK11551 206 RAPVLRAL--F-----------------GE--GRATATLLLWISYFFTLIVLYFLLNWLP-SLLVG-QGLS------RSQ 256 (406)
T ss_pred hhhhHHHH--h-----------------hh--hhhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHh-CCCC------hhh
Confidence 00000000 0 00 0001111111111111111111111111 11111 1111 112
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
.+.......+..++...+.+++.|++.+| +.+..+.+...+++..+.+ ..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~~~~~-------------------~~~ 307 (406)
T PRK11551 257 AGLVQIAFNIGGALGSLLIGALMDRLRPR----------RVVLLIYAGILASLAALAA-------------------APS 307 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHH----------HHHHHHHHHHHHHHHHHHh-------------------cCc
Confidence 33444455556666777777777665544 2233344444444433332 123
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
.+.+.+..++.+++.....+..+++..|.+|++.||++.|+.+....+|..+|+.+.+.+.+.. +
T Consensus 308 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~---------------~ 372 (406)
T PRK11551 308 FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG---------------R 372 (406)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC---------------C
Confidence 3344556667777777778888899999999999999999999999999999999999875321 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhh
Q 008450 515 RLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
.+...++..+.+.+++.+..+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 373 STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 13455666666666666555544
No 16
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.93 E-value=1.4e-23 Score=227.96 Aligned_cols=403 Identities=11% Similarity=0.038 Sum_probs=233.3
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCc
Q 008450 46 MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQAS 125 (565)
Q Consensus 46 l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (565)
+|.+..+.+++.+.+.++..++++++|+++||+ |||++++++.+++.++.++++++... . .+...+.
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~-~-----------~~~~~~~ 116 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFG-F-----------TSIGPDN 116 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhccc-c-----------ccccccc
Confidence 488999999999999999999999999999999 99999999999999988887764100 0 0000011
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc--------cc
Q 008450 126 GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ--------DE 197 (565)
Q Consensus 126 ~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~--------~~ 197 (565)
...+..++++|+++|++.|+..|...++++|++|+++ |+++++.......+|.++++.+++.+. +.
T Consensus 117 ~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 190 (479)
T PRK10077 117 TGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNT 190 (479)
T ss_pred hhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccc
Confidence 1236678899999999999999999999999999998 999999999999999999887766543 45
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchh
Q 008450 198 ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFH 277 (565)
Q Consensus 198 ~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (565)
+|||++|++.++..++..+..++. ++.++....+.+.++..+.... .. +. .+...
T Consensus 191 ~gWr~~f~~~~~~~~~~~~~~~~l-~~s~~~l~~~~~~~~~~~~~~~-~~--~~---------------------~~~~~ 245 (479)
T PRK10077 191 DGWRYMFASEAIPALLFLMLLYFV-PETPRYLMSRGKQEQAEGILRK-IM--GN---------------------TLATQ 245 (479)
T ss_pred CChHHHHHHHHHHHHHHHHHHHcC-CCCcHHHHHcCCHHHHHHHHHH-Hc--CC---------------------hhHHH
Confidence 799999998776665554443332 3211100000111111000000 00 00 00000
Q ss_pred HHhHH-HHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccch---hhhhhhhccccccccccc
Q 008450 278 FLDKA-AIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMIT---FSVEQATTMERSIGRFQI 353 (565)
Q Consensus 278 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 353 (565)
..+.. ...... ....++ .................+.+... .....+...+ .. +...
T Consensus 246 ~~~~~~~~~~~~-----------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-~~-g~~~ 305 (479)
T PRK10077 246 ALQEIKHSLDHG-----------------RKTGGK-LLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFK-TL-GAST 305 (479)
T ss_pred HHHHHHHHHHHh-----------------hhhhhh-hcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHH-Hc-CCCC
Confidence 00000 000000 000000 00000000000000001111100 0000000000 00 0011
Q ss_pred -CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcc
Q 008450 354 -PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLP 432 (565)
Q Consensus 354 -~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (565)
..........+..++..++.+++.|++.+| ..+..+.+++.++++.+...... .
T Consensus 306 ~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r----------~~~i~~~~~~~v~~~~l~~~~~~---------------~ 360 (479)
T PRK10077 306 DIALLQTIIVGVINLTFTVLAIMTVDKFGRK----------PLQIIGALGMAIGMFSLGTAFYT---------------Q 360 (479)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHhcCh----------HHHHHhHHHHHHHHHHHHHHHhc---------------C
Confidence 112233334445556666777776665554 33677777777777666543210 1
Q ss_pred eeehhhHHHHHHHHHHHHHh-hhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccc
Q 008450 433 VSVFLLIPQFFLVGAGEAFI-YTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNI 511 (565)
Q Consensus 433 ~s~~~li~~~~l~g~g~~~~-~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~ 511 (565)
....+.....++.+.+.... .|..+.++.|.+|++.|++++|+.+...+++..+++.+.+.+.. .+|..++.
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~-------~~~~~~~~ 433 (479)
T PRK10077 361 APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDK-------NSWLVAHF 433 (479)
T ss_pred cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-------ccchhhhc
Confidence 12223334445555555443 36778999999999999999999999999999999888876541 12322211
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCCc
Q 008450 512 NRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPK 547 (565)
Q Consensus 512 ~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~~ 547 (565)
. ....|++.++++++++++.+.+.+|+|+++.+
T Consensus 434 ~---~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 466 (479)
T PRK10077 434 H---NGFSYWIYGCMGVLAALFMWKFVPETKGKTLE 466 (479)
T ss_pred c---CccHHHHHHHHHHHHHHHHHhccccCCCCCHH
Confidence 1 13456777778888877777777776665543
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=2e-23 Score=219.39 Aligned_cols=356 Identities=15% Similarity=0.057 Sum_probs=217.8
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
+.......+.+.+++|+|..|.+++.+.+.+++.+++++.|+++||+ |||+++..++.....+.+..... +
T Consensus 7 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~---~----- 77 (368)
T TIGR00903 7 WVTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP---F----- 77 (368)
T ss_pred HHHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh---c-----
Confidence 44556666677889999999999999999999999999999999999 99998765555444443222221 1
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
++..++++|+++|+|.+.. +.....++|++|+++ |++++++.....++|.++++.++
T Consensus 78 ----------------~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~ 134 (368)
T TIGR00903 78 ----------------NYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAG 134 (368)
T ss_pred ----------------cHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 3788999999999999964 555666799999888 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccC
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIH 271 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (565)
+++.+..|||+.|.+.+++.++..++.+...|+.++++++..+..+.. +
T Consensus 135 ~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~~~~~-------~------------------------ 183 (368)
T TIGR00903 135 LKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGFKDAV-------K------------------------ 183 (368)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcchHHHH-------H------------------------
Confidence 999999999999998777665554444443332111110000000000 0
Q ss_pred CCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccccc
Q 008450 272 HTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRF 351 (565)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (565)
++ . +..++++........+.....++....+.++.+ .+. .++
T Consensus 184 -----~~---~----------------------~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L-~~~-g~s------ 225 (368)
T TIGR00903 184 -----EF---G----------------------ALAGRKDLWIIGAILGFGVALFDNLAIWLEAAL-RPA-GLE------ 225 (368)
T ss_pred -----HH---H----------------------HHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHC-CCC------
Confidence 00 0 001122222222223333333334444444433 211 111
Q ss_pred ccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCc
Q 008450 352 QIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATL 431 (565)
Q Consensus 352 ~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (565)
...+....+......+. ...+.|+..||. + +...+....++.++....+..
T Consensus 226 -~~~~~~~~l~~~~g~~g---~~~~~d~~~r~~-~-----r~~~~~~~~~~~a~~~~~~~~------------------- 276 (368)
T TIGR00903 226 -DIAGDAVALAILAGLIG---VAVIPDRVARAG-L-----RSIYIRAAALLIAAFFLALAF------------------- 276 (368)
T ss_pred -hHHHHHHHHHHHHHHHH---HHHhhHHhhhhh-h-----HHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 11122222222222222 234444433331 1 111122223333333333222
Q ss_pred ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccc
Q 008450 432 PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNI 511 (565)
Q Consensus 432 ~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~ 511 (565)
..+....+....+.+++....++..+++..|..|++.||+++|+.+...++++.+++.+.+.+..
T Consensus 277 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--------------- 341 (368)
T TIGR00903 277 ELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--------------- 341 (368)
T ss_pred ccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---------------
Confidence 11222333444555555666667788999999999999999999999999999999998876641
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHh
Q 008450 512 NRGRLDLFYGLLAILSIINLVIYL 535 (565)
Q Consensus 512 ~~~~~~~~f~~~a~l~lv~~~~~~ 535 (565)
+....|.++++..+++.+..+
T Consensus 342 ---~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 342 ---SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred ---CHHHHHHHHHHHHHHHHHHHH
Confidence 134567777888888776654
No 18
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=1.7e-23 Score=217.39 Aligned_cols=353 Identities=13% Similarity=0.103 Sum_probs=232.9
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..++.......++.|.. +++.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+.++..++..+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~ 84 (365)
T TIGR00900 7 AQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAVLPFV 84 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555566666654 6899999999999999999999999999999999 99999999999988888888777
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
...+ ..+.+.++++|++.|++.+...+...+++.|++|+++ |++++++.+...++
T Consensus 85 ~~~~-------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 139 (365)
T TIGR00900 85 ALLG-------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSL 139 (365)
T ss_pred HHcC-------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHH
Confidence 4211 0247889999999999999999999999999999887 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchH-HHHHHHHHHHHhccccCCCCcCccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIV-HIFQVIVAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (565)
|.++||.+++++.+..+||+.|++.++..+++.+..+..+.+.+++++ .++.+ +..+
T Consensus 140 g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------------------- 197 (365)
T TIGR00900 140 FYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAASE-IQALSNAVLR--------------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCcc-ccccchhHHH---------------------
Confidence 999999999999999999999998877666554444433221111100 00000 0000
Q ss_pred cCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHH-HHHHHHHHhhhcccchhhhhh
Q 008450 262 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPI-WATTIIFWTTYAQMITFSVEQ 340 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 340 (565)
+..+.. +...+.+.+...... ...............+.+..+
T Consensus 198 ---------------~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (365)
T TIGR00900 198 ---------------DTREGI----------------------KFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSK 240 (365)
T ss_pred ---------------HHHhHH----------------------HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 000000 000111111111111 111111111111111222221
Q ss_pred hhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008450 341 ATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSV 420 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~ 420 (565)
..+.+ ....+.+.....+..++...+.+++.++..+| +.+..+.++..+++..+.+..
T Consensus 241 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~------ 298 (365)
T TIGR00900 241 YLGRG------STHYGWVLAAFGLGALLGALLLGLLGRYFKRM----------ALMTGAIFVIGLAILVVGLTP------ 298 (365)
T ss_pred HhCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh----------HHHHHHHHHHHHHHHHHHhhc------
Confidence 11111 11123344444555555556666554333222 334455555555555544321
Q ss_pred hhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 421 ARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 421 ~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
+ +.+...+..++.+++.+...+...++..|.+|++.||++.|+.++...++..+++.+.+.+.
T Consensus 299 -----------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~ 361 (365)
T TIGR00900 299 -----------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLA 361 (365)
T ss_pred -----------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 24556677888999999999999999999999999999999999999999999999998875
No 19
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=8.3e-24 Score=231.19 Aligned_cols=382 Identities=12% Similarity=0.056 Sum_probs=239.6
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
+.....+.+.+++|.+..+.+|+.+.|.++..++.++.|+++||+ |||+++.++.+++.+++++++++++
T Consensus 24 iv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~~~~~~~~~a~~--------- 93 (495)
T PRK14995 24 VLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFGLASLAAAFSPT--------- 93 (495)
T ss_pred HHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHcCC---------
Confidence 445556777889999999999999999999999999999999999 9999999999999999999998833
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccC-CCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQF-DEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
++.++++|+++|+|.++..|.....+.+.+ |+++ |+++++++....++|..+||.+++
T Consensus 94 ---------------~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g~~~~~~~~g~~~gp~lgg 152 (495)
T PRK14995 94 ---------------ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALGVWAAVGSGGAAFGPLVGG 152 (495)
T ss_pred ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999998888888877 4555 999999999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHH------HHHHHHhccccCCCCcCccccCCcc
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQV------IVAAIKKRKMDLPCNVGMLYEDTPE 266 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (565)
++.++.|||+.|++...+.++.+++.....|+.+.++.++.+....... +....+. . . +
T Consensus 153 ~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~--~--~-~---------- 217 (495)
T PRK14995 153 ILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKT--A--L-K---------- 217 (495)
T ss_pred HhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHh--c--c-c----------
Confidence 9999999999999987766665555444444322111111111111000 0011110 0 0 0
Q ss_pred ccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccc
Q 008450 267 ASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMER 346 (565)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (565)
.++.........-.+... ...+...+.+...+....+..+++.........+....... ......+.+.+.....+
T Consensus 218 -~~~~~~~~~~~~~~~~~~-l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lq~v~g~s- 293 (495)
T PRK14995 218 -GFLSLWVTSLTLLTGALL-LGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLV-GFELLMAQELQFVHGLS- 293 (495)
T ss_pred -cCCchHHHHHHHHHHHHH-HHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCC-
Confidence 000000000000000000 00000000000001111111222221111111111111111 11111111222111111
Q ss_pred cccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 008450 347 SIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGL 426 (565)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~ 426 (565)
....+.......+...+..++.+++.+++.+| +.+..|.++..+++..+.....
T Consensus 294 -----~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~----------~~~~~g~~~~~~~~~~l~~~~~----------- 347 (495)
T PRK14995 294 -----PLEAGMFMLPVMVASGFSGPIAGILVSRLGLR----------LVATGGMALSALSFYGLAMTDF----------- 347 (495)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch----------HHHHHHHHHHHHHHHHHHHhcC-----------
Confidence 12234444445566667777778776655443 2356777777777765544311
Q ss_pred CCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 427 TTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 427 ~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
..+.+......++.|+|.+...+.....+.+.+|++.+|.+++++++.+.+|..+|+.+.+.+..
T Consensus 348 -----~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 348 -----STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred -----CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334456678889999999999889999999999999999999999999999999999998753
No 20
>PRK10054 putative transporter; Provisional
Probab=99.93 E-value=1.4e-23 Score=222.79 Aligned_cols=345 Identities=11% Similarity=0.095 Sum_probs=228.0
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++...+++...+.+++|+++++|++..+.+++.+.+.+++.+.+++.|+++||+ |||+++.++.++..++.++.+++
T Consensus 15 ~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~~~~~~~~~~~ 93 (395)
T PRK10054 15 SSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAFASGFIAIPLV 93 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHH
Confidence 67888888888899999999999999999999999999999999999999999999 99999999999998888888877
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
++ ++.++++|.+.|.+.+...+....+..|..|+++ |++++++.+...++
T Consensus 94 ~~------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~l 143 (395)
T PRK10054 94 NN------------------------VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSLNYTMLNI 143 (395)
T ss_pred hH------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHHHHHHHHH
Confidence 33 6667778888888888888889999999999888 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|.++||.+++++.. .+|+.+|++.+++.++.++...+..++.+ ++++++.... +
T Consensus 144 g~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~--~~~~~~~~~~--------~--------------- 197 (395)
T PRK10054 144 GWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE--KAIATETGSV--------W--------------- 197 (395)
T ss_pred HHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc--cccccchhhh--------h---------------
Confidence 99999999998875 79999999887776665444333222211 1110000000 0
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
+.. ...++++........+............. ..+.....
T Consensus 198 -----------------~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~ 237 (395)
T PRK10054 198 -----------------SPS----------------------VLLQDKALLWFTCSGFLASFVSGAFASCI-SQYVMVVA 237 (395)
T ss_pred -----------------hhh----------------------hhccCceehHHHHHHHHHHHHHHHhhhhH-HHHHHHhc
Confidence 000 00011111111111111111111111111 11111100
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
..+.. ....+.+...+........+..+++.|+. +++..+..+.++..+++..+.+.
T Consensus 238 ~~~~~----~~~~g~~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~l~~~~~~~~~~~~~~~~~--------- 294 (395)
T PRK10054 238 DSDFA----EKVVAVVLPVNAAMVVSLQYSVGRRLNAA----------NIRPLMTAGTLCFVIGLVGFIFS--------- 294 (395)
T ss_pred ccchH----HHHHHHHHHhhhhheeeehhHHHHHHccC----------CchhHHHHHHHHHHHHHHHHHHc---------
Confidence 00000 00111222223233333333444443322 22234566776777766555432
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhc
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 497 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~ 497 (565)
..+.+.+.+..++.++|+....|..++.+.+.+|++.||++.+..+ ..++|..+||.+.+.+.+.
T Consensus 295 ---------~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~ 359 (395)
T PRK10054 295 ---------GNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTT 359 (395)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 1123344557788999999888999999999999999999998765 5668999999999998653
No 21
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=3.2e-23 Score=219.89 Aligned_cols=356 Identities=13% Similarity=0.110 Sum_probs=232.6
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
...+.+.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..++.+.+++.++++++++
T Consensus 30 ~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a~~------------ 96 (393)
T PRK09705 30 PLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELYPQ------------ 96 (393)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHCcc------------
Confidence 445567789999999999999999999999999999999999 9999999999999999999999843
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
++.++++|+++|+|.+...+..+.++.|++| ++ |+++++.+....++|..+|+.+++++.+
T Consensus 97 ------------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~~~~l~~ 157 (393)
T PRK09705 97 ------------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAITPWLVQ 157 (393)
T ss_pred ------------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778999999999999999999999999987 66 9999999999999999999999999888
Q ss_pred cc-cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcc
Q 008450 197 EI-SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQ 275 (565)
Q Consensus 197 ~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (565)
+. +||..+.+.++..++++...+...++ +|++++.+ +.
T Consensus 158 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------------------~~------------------ 196 (393)
T PRK09705 158 HSETWYQTLAWWALPAVVALFAWWWQSAR----EVASSHKT-------------------TT------------------ 196 (393)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCccccCC-------------------Cc------------------
Confidence 75 89998876655544433333222111 11100000 00
Q ss_pred hhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCc
Q 008450 276 FHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPA 355 (565)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (565)
... + ..++++..............+.....+.+..+ .+ ...+ ....
T Consensus 197 ---------------------~~~---~--~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l-~~-~g~s------~~~a 242 (393)
T PRK09705 197 ---------------------TPV---R--VVFTPRAWTLGVYFGLINGGYASLIAWLPAFY-IE-IGAS------AQYS 242 (393)
T ss_pred ---------------------CCc---c--cccCHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-cCCC------hhhh
Confidence 000 0 00111111111111111112222222222222 21 1111 1122
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
+....+..+..++...+.+++.++..+| +.+.++..+..++...+... +.+.
T Consensus 243 g~~~~~~~i~~i~g~~~~g~l~~r~~~~----------~~~~~~~~l~~~~~~~~~~~------------------~~~~ 294 (393)
T PRK09705 243 GSLLALMTLGQAAGALLMPAMARHQDRR----------KLLMLALVLQLVGFCGFIWL------------------PLQL 294 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccch----------HHHHHHHHHHHHHHHHHHHc------------------cchH
Confidence 3344455566666666666664443332 33555666666665544332 1111
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccC-CchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKS-PKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
..+ ..++.+++.+...|.......+.. |++.+|+.+|+.+....++..++|.+.+++.+..+
T Consensus 295 ~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g--------------- 357 (393)
T PRK09705 295 PVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG--------------- 357 (393)
T ss_pred HHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---------------
Confidence 111 233456676677777766666676 46789999999999999999999999998865322
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 008450 515 RLDLFYGLLAILSIINLVIYLICAVWYKPK 544 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~ 544 (565)
++...|.+.++++++..+..+...+|++.+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 358 NYLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 235567777777777777777776665433
No 22
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=7e-23 Score=222.24 Aligned_cols=392 Identities=11% Similarity=0.050 Sum_probs=236.5
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+..+.+...++.+. +++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..++.++++++
T Consensus 18 ~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~ 95 (471)
T PRK10504 18 GFFMQSLDTTIVNTALPSMA-QSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFTLGSLFCALS 95 (471)
T ss_pred HHHHHHHhHHHHHHHHHHHH-HHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555565666666654 57999999999999999999999999999999999 99999999999999888887776
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
. +++.++++|+++|+|.+...|....++.|.+|+++ |++++++.....++
T Consensus 96 ~------------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 145 (471)
T PRK10504 96 G------------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVTLPGQV 145 (471)
T ss_pred C------------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHH
Confidence 2 26778999999999999999999999999999887 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHH-HHHHHhccccCCCCcCccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVI-VAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 261 (565)
|..+||.+++++.+..|||+.|++..+..++..++.....++.+.++++.+......... ...... .. .....
T Consensus 146 g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~~--~~~~~--- 219 (471)
T PRK10504 146 GPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTL-AL--DGSKG--- 219 (471)
T ss_pred HHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHH-HH--hcCCc---
Confidence 999999999999999999999998876665555444444333222111111111100000 000000 00 00000
Q ss_pred cCCccccccCCCcchhHHhHHH------HhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccch
Q 008450 262 EDTPEASRIHHTEQFHFLDKAA------IVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMIT 335 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (565)
..+............. ..++.. ...+ ....+..++ |.+...+.................+
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~~ 285 (471)
T PRK10504 220 ------LGLSPLAIAGLVAVGVVALLLYLLHARN-----NNRA--LFSLKLFRT-RTFSLGLAGSFAGRIGSGMLPFMTP 285 (471)
T ss_pred ------CCcchHHHHHHHHHHHHHHHHHHHHHhc-----CCCC--ccCHHHhcc-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000000 000110 0000 111111122 2222221111111111111111112
Q ss_pred hhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008450 336 FSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVER 415 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~ 415 (565)
.+.+...+.+ ....+.......+..++..++.+++.+|+.+| +.+..+.++..++..++.+...
T Consensus 286 ~~~~~~~g~~------~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~----------~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 286 VFLQIGLGFS------PFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR----------RVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHcCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch----------HHHHHHHHHHHHHHHHHHhccc
Confidence 2222111111 11122333333444444556666665554433 3356666666666555443210
Q ss_pred HHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 416 KRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
..+.+.+.+..++.+++.+..++..+.++.+.+|++.+|+++|+.++...+|..+|+.+.+.+.
T Consensus 350 ----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll 413 (471)
T PRK10504 350 ----------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLL 413 (471)
T ss_pred ----------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122233445677788888888899999999999999999999999999999999999999876
Q ss_pred hcc
Q 008450 496 KVT 498 (565)
Q Consensus 496 ~~~ 498 (565)
...
T Consensus 414 ~~~ 416 (471)
T PRK10504 414 GLF 416 (471)
T ss_pred HHh
Confidence 543
No 23
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.5e-22 Score=215.38 Aligned_cols=343 Identities=13% Similarity=0.081 Sum_probs=221.0
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
++.....+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||++.++.++..++.+++.++.
T Consensus 27 ~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~----- 99 (406)
T PRK15402 27 IANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLAQ----- 99 (406)
T ss_pred hhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHc-----
Confidence 333334444443 5678999999999999999999999999999999999 999999999999999988887773
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
+++.+++.|+++|++.+...+...+++.|.+|+++ |.++.++......+|..+||
T Consensus 100 -------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~ 154 (406)
T PRK15402 100 -------------------SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGP 154 (406)
T ss_pred -------------------cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHH
Confidence 26778999999999999988999999999999887 88888888888889999999
Q ss_pred HHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCcccc
Q 008450 189 TVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEAS 268 (565)
Q Consensus 189 ~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (565)
.+++++.+..+||+.|++.+++.+++.+..+...|+.+++++++.+..+..
T Consensus 155 ~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 205 (406)
T PRK15402 155 LVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELG----------------------------- 205 (406)
T ss_pred HHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHH-----------------------------
Confidence 999999998999999998877766655544433332111100000000000
Q ss_pred ccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccc
Q 008450 269 RIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSI 348 (565)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (565)
+.. ....++++............... ..+....+.+..+....+
T Consensus 206 -----------~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~--- 249 (406)
T PRK15402 206 -----------RDY---------------------KLVLKNRRFVAGALALGLVSLPL-LAWIALSPVILISGEQLS--- 249 (406)
T ss_pred -----------HHH---------------------HHHHcCcHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHhCCC---
Confidence 000 00011111111111111111111 111111111211111111
Q ss_pred cccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 349 GRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTT 428 (565)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (565)
....+.......+..++..++.+++.|+..+| +.+.++.++..++...+.+....
T Consensus 250 ---~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~----------~~~~~~~~~~~~g~~~~~~~~~~------------ 304 (406)
T PRK15402 250 ---SYEYGLLQVPVFGALIAGNLTLARLTSRRPLR----------SLIRMGLWPMVAGLLLAALATVI------------ 304 (406)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHHHHHHHHHHHc------------
Confidence 11112222222333444555556654443332 34667777777777766553210
Q ss_pred CCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 429 ATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 429 ~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
...+++++++..++.++|.+...+..+...... +++.||+..+++++.+.++..+|+.+.+.+..
T Consensus 305 --~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 305 --SSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 023455667788889999988887777766544 45889999999999999999999999988753
No 24
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.92 E-value=7.1e-23 Score=230.27 Aligned_cols=155 Identities=17% Similarity=0.165 Sum_probs=134.6
Q ss_pred HHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 35 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 35 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
+..+.+++.+++|++..+.+++.+++.++.+++.+++|+++||+ |||+++++++++.+++.++++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa~s---------- 254 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFVQG---------- 254 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhh----------
Confidence 55567778889999999999999999999999999999999999 9999999999999999999888733
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
++.++++|+++|+|.|+..|....++.|.+|++. |++.+++..+...+|.++++.++..+
T Consensus 255 --------------~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 255 --------------YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999998 99999999999999999998877665
Q ss_pred ccc-------------ccchhhHHHHHHHHHHHHHHHHh
Q 008450 195 QDE-------------ISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 195 ~~~-------------~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
... .+||+.|++.++..++++++.++
T Consensus 315 l~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 315 IPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred HHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 432 36899888877666655544443
No 25
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.92 E-value=1.8e-23 Score=216.37 Aligned_cols=348 Identities=20% Similarity=0.282 Sum_probs=225.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+......+.++.++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.+++..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhhhh
Confidence 34555566555555666588999999999999999999999999999999999999 99999999999999996666665
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
+ +.+.++++|++.|++.+...+...+++.|++|+++ |++++++.....++
T Consensus 83 ~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 132 (352)
T PF07690_consen 83 S------------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSL 132 (352)
T ss_dssp C------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHH
T ss_pred h------------------------hHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhh
Confidence 2 25589999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|.++||.+++++.+..+||+.|++.+++.++..++.....++.+++++..++.++.
T Consensus 133 g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------ 188 (352)
T PF07690_consen 133 GSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE------------------------ 188 (352)
T ss_dssp HHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT------------------------
T ss_pred hhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc------------------------
Confidence 99999999999999999999999998887776654333332211111110000000
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHH-HHHHHHHHHHhhhcccchhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLL-PIWATTIIFWTTYAQMITFSVEQA 341 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 341 (565)
.. .+.++.. ..+...+++.+.... ..+........ .....+.+..+.
T Consensus 189 ---------~~---------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~ 236 (352)
T PF07690_consen 189 ---------SK---------------------KPKPLKP-GFKSLFKNPVLWILLIAFFLFFFVFSG-FSFFLPLYLQEV 236 (352)
T ss_dssp --------------------------------HHHCCCH--CTHHHHHHCCHHHHHHHHHHHHHHHH-HHHHHHHHCCHH
T ss_pred ---------cc---------------------ccccccc-ccccccccchhhhhhhhhhHHHHHHHH-hhcccchhhhhc
Confidence 00 0000000 001112222221111 11111111111 111111221221
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~ 421 (565)
.+.+ . ....+.+..+..+...+...+.+++.+|+.++ +..........+....+.+...
T Consensus 237 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~------ 295 (352)
T PF07690_consen 237 LGFS-G----PSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR----------RRLLIAILLLILGALGLLLLPF------ 295 (352)
T ss_dssp HHCC-T----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH----------HHHHHHHHHHHHHHHHHCCSHH------
T ss_pred cCCC-H----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH----------HHHHHHHHHHHHHHHHHHHHHH------
Confidence 1221 0 01222334445555555666777776554432 1223333333333332222111
Q ss_pred hhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 008450 422 RAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSS 488 (565)
Q Consensus 422 ~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~ 488 (565)
..+..+.+...++.+++.+...+...++..+.+|++.||++.|+.++..++|..+||
T Consensus 296 ----------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 296 ----------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ----------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 123455666888899999999999999999999999999999999999999999886
No 26
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=1.1e-22 Score=213.00 Aligned_cols=366 Identities=11% Similarity=0.043 Sum_probs=229.2
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHH-HHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI-FAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~a~ 101 (565)
..++..++.....+.++.|+++++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.+++ +.....++.+++++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 5 VAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHHHh
Confidence 45667777788888899999999999999999999999999999999999999999 99887655 55555566677776
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcce--eehhhHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYF--FSRFFFF 179 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~ 179 (565)
++ +++.+++.|+++|.+.+...|...++..|..|+++ |++. .+.....
T Consensus 84 ~~------------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 133 (375)
T TIGR00899 84 NR------------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQ 133 (375)
T ss_pred cc------------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHH
Confidence 62 26778888999888888888888888888876655 5543 5677777
Q ss_pred HHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCc
Q 008450 180 ISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGM 259 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (565)
.++|.++||.+++++.+..+||+.|++.+++.++..++.++..|+.++++++.+..
T Consensus 134 ~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 189 (375)
T TIGR00899 134 ISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGALTR------------------------ 189 (375)
T ss_pred HhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccccCc------------------------
Confidence 89999999999999999899999999988776655554444333221111000000
Q ss_pred cccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhh
Q 008450 260 LYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVE 339 (565)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (565)
. +. + +..++++........+.............+ .+..
T Consensus 190 --------------~--~~------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 227 (375)
T TIGR00899 190 --------------L--EV------------------------R-GLLASRDTRLLFVACTLMWGCNILYIINMP-LLII 227 (375)
T ss_pred --------------c--hh------------------------h-hhhcCcchHHHHHHHHHHHHHHHHHHhhhH-HHHH
Confidence 0 00 0 000011110000111111111111111111 2222
Q ss_pred hhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008450 340 QATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLS 419 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~ 419 (565)
+....+.. ..+..........++...+.+++.||+.+| +.+.++.++..+.+......
T Consensus 228 ~~~g~~~~------~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~----------~~~~~~~~~~~~~~~~~~~~------ 285 (375)
T TIGR00899 228 HELGLPDK------LAGLMMGTAAGLEIPFMLLAGYLIKRFGKR----------RLMLLAALAGVAFYTGLAAD------ 285 (375)
T ss_pred HHcCCCHH------HHHHHHHHHHHHHHHHHHhHHHHHHHhcch----------hHHHHHHHHHHHHHHHHHHH------
Confidence 11111111 112222233333344445566665554443 22344444444333332221
Q ss_pred hhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhccc
Q 008450 420 VARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTG 499 (565)
Q Consensus 420 ~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~ 499 (565)
.+.+.++...++.+++.+...+..+.+..|..|++ +++++++++....+|..+++.+.+.+.+..
T Consensus 286 -------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~- 350 (375)
T TIGR00899 286 -------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERW- 350 (375)
T ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 12334455666777877777888888888988875 679999999999999999999999875421
Q ss_pred CCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhh
Q 008450 500 SKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 500 ~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
+ +...|++.+++.+++.++.+.+
T Consensus 351 -----g----------~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 351 -----S----------YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred -----c----------chhHHHHHHHHHHHHHHHHhee
Confidence 1 3556778888877777765443
No 27
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=3.5e-23 Score=219.74 Aligned_cols=372 Identities=13% Similarity=0.083 Sum_probs=238.9
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchh-----hhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSAT-----SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 97 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 97 (565)
..++..+++....+.++.|.+ ++|.+..+ .+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.+
T Consensus 22 ~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~ 99 (408)
T PRK09874 22 GCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSALGMGIVMV 99 (408)
T ss_pred HHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHHHHHHHHHH
Confidence 556666666666677777764 68888655 48889999999999999999999999 999999999999888888
Q ss_pred HHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh
Q 008450 98 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 177 (565)
Q Consensus 98 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (565)
++++.+ +++.+++.|++.|++.+ ..+....++.|++|+++ |+++.++..
T Consensus 100 ~~~~~~------------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~ 148 (408)
T PRK09874 100 LMGLAQ------------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWALGTLS 148 (408)
T ss_pred HHHHHh------------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHHHHHH
Confidence 877763 27779999999999865 56778889999998888 999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCc
Q 008450 178 FFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNV 257 (565)
Q Consensus 178 ~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (565)
...++|.+++|.+++++.+..+|++.|++.+++.++..+..+...++.+ ++..++..... +
T Consensus 149 ~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-------~---------- 209 (408)
T PRK09874 149 TGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENF--QPVSKKEMLHM-------R---------- 209 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCc--ccccchhhhHH-------H----------
Confidence 9999999999999999999899999999888776655444433322211 11000000000 0
Q ss_pred CccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhh
Q 008450 258 GMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFS 337 (565)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (565)
+.. +..++++.........................+
T Consensus 210 ----------------------~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T PRK09874 210 ----------------------EVV----------------------TSLKNPKLVLSLFVTTLIIQVATGSIAPILTLY 245 (408)
T ss_pred ----------------------HHH----------------------HhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000011111111111111000000111111111
Q ss_pred hhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 008450 338 VEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR 417 (565)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~ 417 (565)
.......... .....+.+..+..+..++..+..+++.||+.+| +.+..+.++..++++...+.
T Consensus 246 ~~~~~~~~~~---~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~~~~~~---- 308 (408)
T PRK09874 246 VRELAGNVSN---IAFISGMIASVPGVAALLSAPRLGKLGDRIGPE----------KILITALIFSVLLLIPMSFV---- 308 (408)
T ss_pred HHHHhccchH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------hhHHHHHHHHHHHHHHHHHh----
Confidence 1110000000 000011222333444455566666776555443 22445555555444443321
Q ss_pred hhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhc
Q 008450 418 LSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKV 497 (565)
Q Consensus 418 ~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~ 497 (565)
.+.+.+.+..++.+++.+...|...+...+..|++.+|+..++++....+|..+|+.+.+.+.+.
T Consensus 309 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~ 373 (408)
T PRK09874 309 ---------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN 373 (408)
T ss_pred ---------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh
Confidence 23444556777889999988999999999999999999999999999999999999999987531
Q ss_pred ccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhh
Q 008450 498 TGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 538 (565)
Q Consensus 498 ~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~ 538 (565)
. ++...|++.+++.+++.+..+...
T Consensus 374 ~----------------g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 374 Y----------------GFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred c----------------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 135678888888888777665543
No 28
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.92 E-value=1e-22 Score=218.96 Aligned_cols=147 Identities=11% Similarity=0.038 Sum_probs=132.6
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
..+.+.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..+++++++++++
T Consensus 45 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------------- 110 (434)
T PRK11663 45 AMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIINILFGFSSS------------- 110 (434)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHHHHHHHHhH-------------
Confidence 34455668999999999999999999999999999999999 9999999999999999998888733
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE 197 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~ 197 (565)
++.+++.|++.|++.|...+....++.|++|+++ |++++++++...++|.++++.+.+++.+.
T Consensus 111 -----------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~~~~~l~~~ 173 (434)
T PRK11663 111 -----------LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTAHNVGGALIPLVVGAIALH 173 (434)
T ss_pred -----------HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7778899999999999999999999999999988 99999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHH
Q 008450 198 ISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 198 ~gw~~~f~i~~~~~~~~~ 215 (565)
+|||+.|++.++..++..
T Consensus 174 ~gw~~~f~~~~i~~~~~~ 191 (434)
T PRK11663 174 YGWRYGMMIAGIIAIVVG 191 (434)
T ss_pred ccHHHHHHHHHHHHHHHH
Confidence 999999998776655443
No 29
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.92 E-value=1.8e-23 Score=227.27 Aligned_cols=380 Identities=13% Similarity=0.120 Sum_probs=240.5
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
.+.....+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++++
T Consensus 19 ~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~-------- 89 (485)
T TIGR00711 19 TIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGSLLCGVAPN-------- 89 (485)
T ss_pred HHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHHHHHhCcCC--------
Confidence 4455566777889999999999999999999999999999999999 9999999999999999999988732
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
+..++++|+++|++.+...+...+++.|.+|+++ |+++++++.....+|..+||.+++
T Consensus 90 ----------------~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~g~~~~~ 147 (485)
T TIGR00711 90 ----------------LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVLVAPALGPTLGG 147 (485)
T ss_pred ----------------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHhhhhhccHh
Confidence 7779999999999999999999999999999888 999999999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHH----HHHhccccCCCCcCccccCCcccc
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVA----AIKKRKMDLPCNVGMLYEDTPEAS 268 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 268 (565)
++.++++||+.|++.++..+++.++..+..++.++++. ++.+.....+.. .... ....... .
T Consensus 148 ~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~g~~l~~~~~~~~~~-~~~~~~~-----------~ 213 (485)
T TIGR00711 148 WIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAAS--ENFDFLGLLLLSVGLGSLLY-GLSEGPE-----------R 213 (485)
T ss_pred HhccCcCceehhhhhhHHHHHHHHHHHHHcCCcccccc--CCCcHHHHHHHHHHHHHHHH-HHhhCCC-----------C
Confidence 99999999999998877666555544443332211111 111111110000 0000 0000000 0
Q ss_pred ccCCC-cchhHHhHHH------HhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhh
Q 008450 269 RIHHT-EQFHFLDKAA------IVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQA 341 (565)
Q Consensus 269 ~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (565)
.+... +.......+. ...+. ..+.+. ...+..++++........+.....++...... +.+..+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~ 285 (485)
T TIGR00711 214 GWFDSNEILILSITGLVAIIAFVVWEL-----TDDNPL--VDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLL-PLYLQQV 285 (485)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHH-----cCCCCc--cCHHHHcCCChHHHHHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 00000 0000000000 00000 000111 01111122222222221222222222211111 1222211
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~ 421 (565)
...+ ....+.......+..++..++.+++.+|+.+| +.+.+|.++..++..++.+..
T Consensus 286 ~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~----------~~~~~g~~~~~~~~~~~~~~~------- 342 (485)
T TIGR00711 286 LGYT------ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR----------KLVTIGLILYAVGFYWRAFTF------- 342 (485)
T ss_pred cCCC------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH----------HHHHHHHHHHHHHHHHHhccC-------
Confidence 1111 11233444555566667777777776554443 335667777777776654211
Q ss_pred hhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 422 RAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 422 ~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
+...+.+......++.++|.+...+.......+..|++.+|+++|+.++.+.+|+.+|+.+.+.+..
T Consensus 343 --------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 343 --------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0023444556678889999998888888888889999999999999999999999999999988753
No 30
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=6.5e-23 Score=222.53 Aligned_cols=156 Identities=13% Similarity=0.006 Sum_probs=130.5
Q ss_pred HHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCc
Q 008450 39 VTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETAT 118 (565)
Q Consensus 39 ~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (565)
.+.+.+++|++..+.|++.+.+.+++.++.+++|+++||+ |||+++.+++++.+++..+.++...
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 116 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG-------------- 116 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--------------
Confidence 5667789999999999999999999999999999999999 9999999988888877776665310
Q ss_pred ccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccc
Q 008450 119 HTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI 198 (565)
Q Consensus 119 ~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~ 198 (565)
....+.+.+++.|+++|++.+...|....+++|++|+++ |+++++++....++|.++++.+..++.+..
T Consensus 117 -----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~ 185 (467)
T PRK09556 117 -----SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYF 185 (467)
T ss_pred -----cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhh
Confidence 000248889999999999999999999999999999999 999999999999999999998887766543
Q ss_pred ---cchhhHHHHHHHHHHHHHHHHh
Q 008450 199 ---SRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 199 ---gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+|+..|.+.++..++..++.++
T Consensus 186 ~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 186 FDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHH
Confidence 6999888877665544444333
No 31
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=1.2e-22 Score=215.73 Aligned_cols=152 Identities=14% Similarity=0.163 Sum_probs=135.8
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
.....+++ +.+++|.++.+.++..+.+.++..+++++.|+++||+ |||+++..+.++.+++.+++++++
T Consensus 38 ~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~--------- 106 (394)
T PRK10213 38 LPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFAVLLTLSCLLVSFAN--------- 106 (394)
T ss_pred HHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHHHHHHHHHHHHHHHC---------
Confidence 33344444 5679999999999999999999999999999999999 999999999999999998888873
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
+++.++++|+++|++.|...|...+++.|++|+++ |+++.++.....++|.++||.+++
T Consensus 107 ---------------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~~~~~~~~~~g~~ig~~l~~ 165 (394)
T PRK10213 107 ---------------SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKALSVIFGAVSIALVIAAPLGS 165 (394)
T ss_pred ---------------hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999888 999999999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHH
Q 008450 193 YIQDEISRSVGYGICSVAMFMAII 216 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~ 216 (565)
++.+.+|||+.|++.+++.+++.+
T Consensus 166 ~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 166 FLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999988766554433
No 32
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.92 E-value=4.3e-23 Score=215.20 Aligned_cols=355 Identities=12% Similarity=0.042 Sum_probs=230.1
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
..+.+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++++
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~~~--------- 90 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIADS--------- 90 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHHHH---------
Confidence 345677888999999999999999999999999999999999999 9999999999999999999988843
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
++.++++|++.|++.+...+.....+.+++| ++ |+++.++.....++|.++++.+.+.
T Consensus 91 ---------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~ 148 (377)
T TIGR00890 91 ---------------LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLITS 148 (377)
T ss_pred ---------------HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHHH
Confidence 7789999999999999988888888888886 45 8999999999999998877777777
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCC
Q 008450 194 IQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHT 273 (565)
Q Consensus 194 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (565)
+.+..|||+.|++.++..++..+..++..++.++++++++. +. ..
T Consensus 149 ~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--------------------~~ 193 (377)
T TIGR00890 149 VINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNI---------------EV--------------------SV 193 (377)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCc---------------cc--------------------ch
Confidence 77778999999988877665544444332211110000000 00 00
Q ss_pred cchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccccccc
Q 008450 274 EQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQI 353 (565)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (565)
++.+. . +..++++........+..... ..........+. +....+ ..
T Consensus 194 ~~~~~---~----------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~------~~ 240 (377)
T TIGR00890 194 KDYTV---W----------------------EMLRTPQFWVLYLSFFLNAVS-GLLLIGLYKPYG-QSLGLS------DG 240 (377)
T ss_pred hhhhH---H----------------------HHHcCccHHHHHHHHHHHhHH-HHHHHHHHHHHH-HHcCCC------HH
Confidence 00000 0 000111111111111111110 000010111111 111111 11
Q ss_pred CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcce
Q 008450 354 PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV 433 (565)
Q Consensus 354 ~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (565)
..+.+..+..+..++..++.+++.||+.+| +.+.++.++..++...+.+.. ..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~~~~~~~~~~~~~~-----------------~~ 293 (377)
T TIGR00890 241 FLVLAVSISSIFNGGGRPFLGALSDKIGRQ----------KTMSIVFGISAVGMAAMLFIP-----------------ML 293 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------hhhhHHHHHHHHHHHHHHHcc-----------------cc
Confidence 123344555666667777778887766554 124556666666665544321 11
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccccc
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINR 513 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~ 513 (565)
.....+...++.+++.+...+....+..|..|++.|+++.|+.+....+|..+++.+.+.+.+.. +
T Consensus 294 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~------g-------- 359 (377)
T TIGR00890 294 NDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI------G-------- 359 (377)
T ss_pred hhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh------c--------
Confidence 22223334455666666666777788899999999999999999999999999999999875321 1
Q ss_pred chhhHHHHHHHHHHHHHH
Q 008450 514 GRLDLFYGLLAILSIINL 531 (565)
Q Consensus 514 ~~~~~~f~~~a~l~lv~~ 531 (565)
+...|.+.+++.+++.
T Consensus 360 --~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 360 --FEYTFIVTGAFALTSL 375 (377)
T ss_pred --hhhHHHHHHHHHHHhc
Confidence 3456677776666654
No 33
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=3.4e-22 Score=214.72 Aligned_cols=160 Identities=18% Similarity=0.212 Sum_probs=124.9
Q ss_pred HHHHHHHHHHhhhcCC---CCchhhhhHHHHH---HHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 32 MGIAVNLVTYLVGTMH---LPSATSANIVTDF---MGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~---~s~~~~~~~~~~~---~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+...+.+.+++.++++ .+..+.+...+.+ .++..++++++|+++||+ ||||++..+.+++.++++++++++++
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (432)
T PRK10406 38 FYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFGSLVIACLPGY 116 (432)
T ss_pred HHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 4446777788888874 4555444444444 455559999999999999 99999999999999999999987331
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
.. .....+..++++|+++|+|.|+..|...+++.|++|+++ |+++.+..+...+.|.+
T Consensus 117 ~~----------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~~~~~~~G~~ 174 (432)
T PRK10406 117 ET----------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQYVTLIGGQL 174 (432)
T ss_pred hh----------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHHHHHHHHHHH
Confidence 10 011234579999999999999999999999999999998 99999998888888888
Q ss_pred HHHHHHHHhc--------ccccchhhHHHHHHHHHHH
Q 008450 186 MAVTVLVYIQ--------DEISRSVGYGICSVAMFMA 214 (565)
Q Consensus 186 lg~~i~g~l~--------~~~gw~~~f~i~~~~~~~~ 214 (565)
+++.+...+. ..+|||++|++.++..++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 175 LALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 8877665543 2579999999877665543
No 34
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=4.6e-22 Score=217.18 Aligned_cols=160 Identities=16% Similarity=0.138 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHhhhcCCCCchh-hhhH-----HHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 31 TMGIAVNLVTYLVGTMHLPSAT-SANI-----VTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 31 ~~~~~~~l~~yl~~~l~~s~~~-~~~~-----~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
-+++.....+++.++++.+..+ .+++ .++..++..+++++.|+++||+ |||+++.++++++++++++++++++
T Consensus 31 d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~l~~i~~~~~a~~~~ 109 (490)
T PRK10642 31 DFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAITIVIMSISTFCIGLIPS 109 (490)
T ss_pred HHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHhccc
Confidence 3556667788888888654432 1222 4667788999999999999999 9999999999999999999999844
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+.. .....+.+++++|+++|+|.|+..+....+++|++|+++ |+++.++...+.++|.
T Consensus 110 ~~~----------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~G~ 167 (490)
T PRK10642 110 YAT----------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFMGSWLDFGSIAGF 167 (490)
T ss_pred HHH----------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHH
Confidence 211 111123458999999999999999999999999999998 9999999888888888
Q ss_pred HHHHHHHHHhc--------ccccchhhHHHHHHHHHH
Q 008450 185 LMAVTVLVYIQ--------DEISRSVGYGICSVAMFM 213 (565)
Q Consensus 185 ~lg~~i~g~l~--------~~~gw~~~f~i~~~~~~~ 213 (565)
.+|+.+..++. ..+|||++|++.++..++
T Consensus 168 ~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 168 VLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 88876654432 258999999987655443
No 35
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.91 E-value=1.4e-21 Score=208.82 Aligned_cols=171 Identities=15% Similarity=0.116 Sum_probs=148.9
Q ss_pred CchhhHHHHHHHhHHHHHHHHHH--------hhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHH
Q 008450 19 SKTGIELCERLSTMGIAVNLVTY--------LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA 90 (565)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~l~~y--------l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 90 (565)
.+..+-+|..+.+++++..++.. +.+++|.+..+.++..+.+.++..++.+++|+++||+ |||+++..+..
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~ 89 (413)
T PRK15403 11 HAATLFFPMALILYDFAAYLTTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGAL 89 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHH
Confidence 66667788888888877776553 4567899999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhc
Q 008450 91 VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 170 (565)
Q Consensus 91 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (565)
+..+++++++++++ ++.++++|+++|++.+...+....++.|.+|+++ |+
T Consensus 90 ~~~~~~~~~~~a~~------------------------~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~ 139 (413)
T PRK15403 90 IFTLACAATLFTTS------------------------MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GI 139 (413)
T ss_pred HHHHHHHHHHHcCC------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HH
Confidence 99999999988732 7789999999999998777777888999999888 99
Q ss_pred ceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 171 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 171 ~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
++++++....++|..+||.+++++.+..|||+.|++.++..+++.+..++
T Consensus 140 ~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 140 KLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998899999999988776666554444
No 36
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=2.1e-22 Score=215.39 Aligned_cols=146 Identities=14% Similarity=0.209 Sum_probs=133.6
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
....+.+++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++++
T Consensus 36 ~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~--------- 105 (426)
T PRK12307 36 LIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAYSVGTGLSGLASG--------- 105 (426)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhH---------
Confidence 345566777889999999999999999999999999999999999 9999999999999999999888833
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
.+.++++|+++|+|.|...+....++.|.+|+++ |+++.++...+.++|.++++.+.+.
T Consensus 106 ---------------~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~lg~~~~~~l~~~ 164 (426)
T PRK12307 106 ---------------VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFLVSGFGIGNIIAAYFMPS 164 (426)
T ss_pred ---------------HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHHHHHHhHHHHHHHHHHHH
Confidence 7789999999999999999999999999999998 9999999999999999999999999
Q ss_pred hcccccchhhHHHHHHH
Q 008450 194 IQDEISRSVGYGICSVA 210 (565)
Q Consensus 194 l~~~~gw~~~f~i~~~~ 210 (565)
+.+..+||+.|++..+.
T Consensus 165 l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 165 FAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HcccCCHHHHHHHHHHH
Confidence 99989999999875443
No 37
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=2.8e-22 Score=214.01 Aligned_cols=159 Identities=11% Similarity=0.004 Sum_probs=139.7
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
........+.+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+++++.+++++++++++
T Consensus 24 ~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~~------- 95 (412)
T TIGR02332 24 RINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLWGIASTATMFATG------- 95 (412)
T ss_pred hhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 34445566788999999999999999999999999999999999999 9999999999999999999998733
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
++.++++|+++|++.++..|....++.|++|+++ |+++++++....++|.++++.++
T Consensus 96 -----------------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~~~ 152 (412)
T TIGR02332 96 -----------------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALFMIAMPVTMALGLILS 152 (412)
T ss_pred -----------------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999988 99999999999999999999999
Q ss_pred HHhcc------cccchhhHHHHHHHHHHHHHHHHhc
Q 008450 192 VYIQD------EISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 192 g~l~~------~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
+++.+ ..|||+.|++.++..++..++.++.
T Consensus 153 ~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 153 GYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 98863 4699999999877665544444433
No 38
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=1.5e-22 Score=219.36 Aligned_cols=380 Identities=12% Similarity=0.081 Sum_probs=231.9
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCC
Q 008450 45 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 124 (565)
Q Consensus 45 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 124 (565)
+++++..+.|++.+.+.+++.++.+++|+++||+ |||+++.++.++..++.+++.++.+ +
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-~------------------ 129 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-G------------------ 129 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH-c------------------
Confidence 6889999999999999999999999999999999 9999999999998888888765422 1
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccc-cchhh
Q 008450 125 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI-SRSVG 203 (565)
Q Consensus 125 ~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~-gw~~~ 203 (565)
....+++.|+++|++.+...|....++.|++|+++ |+++.++...+.++|.++++.+++++.+.. |||+.
T Consensus 130 ---~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~ 200 (465)
T TIGR00894 130 ---GIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMI 200 (465)
T ss_pred ---CchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCee
Confidence 25679999999999999999999999999999998 999999999999999999999999999884 99999
Q ss_pred HHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHH
Q 008450 204 YGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAA 283 (565)
Q Consensus 204 f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (565)
|++.++..++..++.+...++.+++++..++.+. +. .++ ..+ +.
T Consensus 201 f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~--~~----i~~-~~~--~~--------------------------- 244 (465)
T TIGR00894 201 FYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEK--KY----INS-SLQ--GQ--------------------------- 244 (465)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHH--HH----HHh-hcc--cc---------------------------
Confidence 9998877665554444433322211111111100 00 000 000 00
Q ss_pred HhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhh
Q 008450 284 IVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFV 363 (565)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (565)
. .+.+.+.+|+ +..+++......+..+.....++....+++. +..+..+.+ ....+....+..
T Consensus 245 ----~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~-~l~~~~g~s------~~~~g~~~~~~~ 307 (465)
T TIGR00894 245 ----K--GSTRQSLPIK----AIPKSLPVWAIWFAIFGHFWLYTILPTYLPT-FISWVLRVS------GKENGLLSSLPY 307 (465)
T ss_pred ----c--CCCCCCCCHH----HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCcC------hHHhHHHHHHHH
Confidence 0 0000001110 0111111111111112222222222222222 222222222 112345556667
Q ss_pred HHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHH
Q 008450 364 SAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFF 443 (565)
Q Consensus 364 ~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~ 443 (565)
+..++...+.+++.|++.+|...+ ....+++..+..+...+...+..... ..+....++.+.
T Consensus 308 ~~~~i~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 369 (465)
T TIGR00894 308 LFAWLCSIFAGYLADFLKSSKTLS--LTAARKIFNGIGGLGPGIFAYALPYL----------------SAAFYLTIIILT 369 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCc--HHHHHHHHHHHHHHHHHHHHHHHHHc----------------CCchHHHHHHHH
Confidence 777788888888888776542211 11111122222211111111111100 112233334444
Q ss_pred HHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHH
Q 008450 444 LVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLL 523 (565)
Q Consensus 444 l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~ 523 (565)
+.+.+.....+..+....+..|+ .+|+.+|+.++...+|+.+++.+.+.+.+.. +| +.+...|.+.
T Consensus 370 l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~------~~-------~~~~~~f~~~ 435 (465)
T TIGR00894 370 LANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQD------SK-------NVWLIVFLIM 435 (465)
T ss_pred HHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCC------Cc-------hHHHHHHHHH
Confidence 44455555556666667777776 7999999999999999999999988764211 01 2246678888
Q ss_pred HHHHHHHHHHHhhhh
Q 008450 524 AILSIINLVIYLICA 538 (565)
Q Consensus 524 a~l~lv~~~~~~~~~ 538 (565)
+++.+++.+++....
T Consensus 436 ~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 436 AFVNILCVIFYLIFG 450 (465)
T ss_pred HHHHHHHHHHeeeee
Confidence 888888877766543
No 39
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.91 E-value=5.7e-22 Score=213.23 Aligned_cols=409 Identities=12% Similarity=0.140 Sum_probs=233.3
Q ss_pred HHhhhcCCCC--------chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 40 TYLVGTMHLP--------SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 40 ~yl~~~l~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
+.+..+++.+ ..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.+++.+..+.
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~~------ 124 (481)
T TIGR00879 52 ALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAFA------ 124 (481)
T ss_pred hcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhccc------
Confidence 3444455555 89999999999999999999999999999 99999999999999999988775321
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
.+.+.++++|+++|+|.+...+....+++|++|+++ |++++++.+...++|.++++.++
T Consensus 125 ---------------~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 125 ---------------LSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred ---------------cchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHH
Confidence 235689999999999999999999999999999998 99999999999999999999998
Q ss_pred ---HHhcccccchhhHHHHHHHHHHHHHHHHhcccccccc-CCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccc
Q 008450 192 ---VYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK-KSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEA 267 (565)
Q Consensus 192 ---g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (565)
+.+.+..+||+.|++.++..++.++..++. ++.+.. ..++ +.++..+.... .+ +...++. ..
T Consensus 184 ~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~~~~~~~~~-~~--~~~~~~~--~~------- 249 (481)
T TIGR00879 184 SGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFL-PESPRWLVGKG-RVEEARKSLAR-LR--GTSGEDK--EL------- 249 (481)
T ss_pred HHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcC-CCChHHHHHcC-ChHHHHHHHHH-Hh--CCCCCcH--HH-------
Confidence 777777899999999666555444443333 221110 0011 11111000000 00 0000000 00
Q ss_pred cccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhH-HHhHHH-HHHHHHHHHhhhcccchh--hhhhhhc
Q 008450 268 SRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKM-VARLLP-IWATTIIFWTTYAQMITF--SVEQATT 343 (565)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~ 343 (565)
.......+.... .+.. ..+..|.. .....+. ...... .................. +..+...
T Consensus 250 -----~~~~~~~~~~~~-~~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 315 (481)
T TIGR00879 250 -----LDELELIDIKRS-IEKR----SVQPSWGS----LFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAG 315 (481)
T ss_pred -----HHHHHHHHHHHH-HHHh----hccccHHH----HHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcC
Confidence 000000000000 0000 00000100 0000000 000000 111111111111111111 1111111
Q ss_pred ccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 344 MERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARA 423 (565)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~ 423 (565)
.+ ............+..++...+.+++.|++.+| +.+.++.++..+++.++.+......+
T Consensus 316 ~~------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~---- 375 (481)
T TIGR00879 316 VS------TDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR----------PLLLIGAAGMAICLFVLGILGASFVT---- 375 (481)
T ss_pred CC------chHHHHHHHHHHHHHHHHHHHHHHHHHHhcch----------HHHHHHHHHHHHHHHHHHHHhhcccC----
Confidence 11 11123344445555566666777776665554 23556667777776666532110000
Q ss_pred cCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCC
Q 008450 424 VGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGG 503 (565)
Q Consensus 424 ~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~ 503 (565)
+.+...+..++....++.+.......+....+..|..|++.|++++|+.+++..+|.++++.+.+.+....
T Consensus 376 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~----- 446 (481)
T TIGR00879 376 ----GSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI----- 446 (481)
T ss_pred ----CcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----
Confidence 00000122222222222222222334666778899999999999999999999999999999988775321
Q ss_pred CCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 008450 504 GGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPK 544 (565)
Q Consensus 504 ~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~ 544 (565)
+ +...|++.+++++++.++.++..++.+++
T Consensus 447 -~----------~~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 476 (481)
T TIGR00879 447 -G----------VGGVFIFFGGLNVLGLIFVYFFLPETKGR 476 (481)
T ss_pred -C----------ccceehhHHHHHHHHHHHHheecccCCCC
Confidence 1 24567888888888888777766665543
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=5.5e-22 Score=209.56 Aligned_cols=164 Identities=10% Similarity=0.139 Sum_probs=140.2
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
++.....+...+.+ +.+.+++|.+..+.+++.+.+.+++.+++++.|+++||+ |||+++.++.++.+++.++++++++
T Consensus 13 ~~~~~~~~~~~~~l-~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~l~~~~~~ 90 (382)
T PRK10091 13 FGLGMAEFGIMGVL-TELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVIGNAMFTLSSS 90 (382)
T ss_pred HHHHhhHHHHHhCh-HHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHHHHHHHHhCc
Confidence 33434444444444 456789999999999999999999999999999999999 9999999999999999999988833
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
++.+++.|++.|++.+...+....++.|++|+++ |+++++......++|.
T Consensus 91 ------------------------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~ 140 (382)
T PRK10091 91 ------------------------YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVSGMTVAN 140 (382)
T ss_pred ------------------------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHHHHHHHH
Confidence 7889999999999999988888899999998887 9999999999999999
Q ss_pred HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 185 LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.+||.+++++.+..+||+.|++.++..++..+..+.
T Consensus 141 ~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 176 (382)
T PRK10091 141 LLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYF 176 (382)
T ss_pred HHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999899999999988766555444333
No 41
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.91 E-value=1.7e-21 Score=204.66 Aligned_cols=331 Identities=16% Similarity=0.140 Sum_probs=217.1
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
..+++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++++
T Consensus 27 ~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~~~------------- 92 (385)
T TIGR00710 27 AFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFALSSLGLALSNN------------- 92 (385)
T ss_pred cHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 34556789999999999999999999999999999999999 9999999999999999998887732
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE 197 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~ 197 (565)
.+.++++|++.|++.+...+...+++.|.+|+++ |++++++.+...++|..+|+.+++++.+.
T Consensus 93 -----------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 155 (385)
T TIGR00710 93 -----------IETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILMPVLALAPAVAPLLGGYILVW 155 (385)
T ss_pred -----------HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7779999999999999999999999999999888 99999999999999999999999999998
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchh
Q 008450 198 ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFH 277 (565)
Q Consensus 198 ~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (565)
.+||+.|++.++..++..+..+...++.++++. +++..+..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------------------------------- 199 (385)
T TIGR00710 156 LSWHAIFAFLSLAGILLSALIFFILPETLPYEA-RIQISTYFETF----------------------------------- 199 (385)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcc-cCCHHHHHHHH-----------------------------------
Confidence 999999998877666555444443332111100 00000000000
Q ss_pred HHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcch
Q 008450 278 FLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGS 357 (565)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (565)
. ...++++................. +....+.+..+....+ ....+.
T Consensus 200 ----~----------------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~------~~~~g~ 246 (385)
T TIGR00710 200 ----L----------------------LLLKSKMFWGYALIYGASFGGFFA-FFSGAPFVYIDIMGVS------PSVFGL 246 (385)
T ss_pred ----H----------------------HHHcCchhHHHHHHHHHHHHHHHH-HHHcChHHHHHHcCCC------HHHHHH
Confidence 0 000111111111111111111111 1111112222111111 111233
Q ss_pred hhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehh
Q 008450 358 LTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFL 437 (565)
Q Consensus 358 ~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 437 (565)
+.....+..++..++.+++.+++.+| +.+..+.++..++..++...... ...+...
T Consensus 247 ~~~~~~~~~~~~~~~~g~l~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~ 302 (385)
T TIGR00710 247 LFALNIIAMIFGGFLNGRFIKKWGAK----------SLLRMGLILFAVSAVLLEITAIL--------------GLGSWAM 302 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHH----------HHHHHHHHHHHHHHHHHHHHHHh--------------ccchHHH
Confidence 44455566667777777776655443 23455666666665554433210 0122334
Q ss_pred hHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhh
Q 008450 438 LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAV 493 (565)
Q Consensus 438 li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~ 493 (565)
++...++.+++.....+.......|..| +.+++++++.+.....++.+.+.+.+.
T Consensus 303 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~ 357 (385)
T TIGR00710 303 IIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSL 357 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4556677888888888888888888887 569999999998887655555555553
No 42
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.5e-22 Score=217.07 Aligned_cols=379 Identities=17% Similarity=0.206 Sum_probs=254.1
Q ss_pred hcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccC
Q 008450 44 GTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQ 123 (565)
Q Consensus 44 ~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 123 (565)
.+++++..|.+++.+++..|+.++..++|+++||+ |-|+++..+.++.++++++..++.+.
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~------------------ 126 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI------------------ 126 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh------------------
Confidence 35788999999999999999999999999999999 99999999999999999999998652
Q ss_pred CcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc-ccchh
Q 008450 124 ASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE-ISRSV 202 (565)
Q Consensus 124 ~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~-~gw~~ 202 (565)
.++.+++.|+++|++.|...|+...+.+.+.|++| |+++.++...+..+|.+++.++.|++.+. .||+.
T Consensus 127 ----~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~s 196 (466)
T KOG2532|consen 127 ----GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPS 196 (466)
T ss_pred ----cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCch
Confidence 34578999999999999999999999999999999 99999999999999999999999999998 99999
Q ss_pred hHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHH
Q 008450 203 GYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKA 282 (565)
Q Consensus 203 ~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (565)
+|++.+++.++..++++......+.++|.-++.+ .+.+++.
T Consensus 197 ifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~E---------------------------------------l~~I~~~ 237 (466)
T KOG2532|consen 197 IFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKE---------------------------------------LKYIEKG 237 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHH---------------------------------------HHHHHhc
Confidence 9999998877766665554332222222111100 0000000
Q ss_pred HHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhh
Q 008450 283 AIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFF 362 (565)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (565)
+.........+.|| |.++.-.++++.....+.-...+..+..+.+.++...++-....++++.+++
T Consensus 238 ---k~~~~~~~~~~vP~-----------~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466)
T KOG2532|consen 238 ---KSEAHVKKKPPVPY-----------KAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466)
T ss_pred ---ccccccCCCCCCCH-----------HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence 00000000012333 3333333444443333333332222233333333323222233678888999
Q ss_pred hHHHHHHHHHhhhhhhhccccccCCCCCCchhHH--HHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHH
Q 008450 363 VSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRM--AIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIP 440 (565)
Q Consensus 363 ~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l--~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~ 440 (565)
.+...+...+.+.+.|++.+| .- .....+++ .++....++.++.+++.. ....+..+
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~-~l--s~t~~rkifn~i~~~~~ai~l~~l~~~~------------------~~~~~~a~ 362 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFR-IL--SETTVRKIFNTIAFGGPAVFLLVLAFTS------------------DEHRLLAV 362 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cC--chHhHHHHHHhHHHHHHHHHHHeeeecC------------------CCcchHHH
Confidence 999999999999999988886 22 23333444 445555555555555541 11112222
Q ss_pred HHHHHHHHHHHhh-hhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHH
Q 008450 441 QFFLVGAGEAFIY-TGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLF 519 (565)
Q Consensus 441 ~~~l~g~g~~~~~-~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~ 519 (565)
.....+.+..... +..+.-..+.+| +..+..+|+.+++..+..+++|.+.+.+-. ++...+| ..+
T Consensus 363 ~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~---~~t~~eW----------~~V 428 (466)
T KOG2532|consen 363 ILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT---DNTREEW----------RIV 428 (466)
T ss_pred HHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC---CCCHHHH----------HHH
Confidence 2222223333333 333333333355 669999999999999999999999998742 1122334 788
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 008450 520 YGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 520 f~~~a~l~lv~~~~~~~~~~ 539 (565)
|.+.+++.+++.+++.++..
T Consensus 429 F~i~a~i~~~~~i~f~~f~s 448 (466)
T KOG2532|consen 429 FLIAAGILIVGNIIFLFFGS 448 (466)
T ss_pred HHHHHHHHHHhchheeEeec
Confidence 99999999999988877753
No 43
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=7.3e-22 Score=208.59 Aligned_cols=161 Identities=14% Similarity=0.208 Sum_probs=138.3
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.+++..+..+ +.....+.+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++.++++++++++
T Consensus 20 ~~~~~~~~~~-~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~ 97 (405)
T TIGR00891 20 GWLLDAFDFF-LVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIVLFSAGTLACGFA 97 (405)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444333 445555677889999999999999999999999999999999999 99999999999999999888877
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.+ ++.++++|++.|++.+...+...+++.|++|+++ |+++.++.....++
T Consensus 98 ~~------------------------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~ 147 (405)
T TIGR00891 98 PG------------------------YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASGLLISGYAV 147 (405)
T ss_pred cc------------------------HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHHHHHHHHHH
Confidence 32 7779999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHHhccccc--chhhHHHHHHHHHHHH
Q 008450 183 GTLMAVTVLVYIQDEIS--RSVGYGICSVAMFMAI 215 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~g--w~~~f~i~~~~~~~~~ 215 (565)
|.++++.+++.+.+..+ ||+.|.+.++..++.+
T Consensus 148 g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 148 GAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 99999999998887766 9999987665544433
No 44
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.90 E-value=3.2e-21 Score=211.18 Aligned_cols=149 Identities=18% Similarity=0.206 Sum_probs=123.6
Q ss_pred CCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcc
Q 008450 47 HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASG 126 (565)
Q Consensus 47 ~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (565)
+.++.+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++++++.+. ...
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~~~~~v~~~~~~~~~~~------------------~~~ 112 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMELIIMIIATVASGLSPGS------------------SPK 112 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHHHccCc------------------ccc
Confidence 45667789999999999999999999999999 99999999999999999888876210 001
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc----------
Q 008450 127 FQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD---------- 196 (565)
Q Consensus 127 ~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~---------- 196 (565)
.++..++++|+++|++.|+..+..+.+++|.+|+++ |+++.++.+....+|.++++.++.++..
T Consensus 113 ~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~ 186 (502)
T TIGR00887 113 SVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAA 186 (502)
T ss_pred hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 236789999999999999999999999999999999 9999999999999999999888765431
Q ss_pred -------------cccchhhHHHHHHHHHHHHHHHHh
Q 008450 197 -------------EISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 197 -------------~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.++||+.|.+.++..++..+..++
T Consensus 187 ~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~ 223 (502)
T TIGR00887 187 DEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLT 223 (502)
T ss_pred ccccccccccchhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 247999998777666555444333
No 45
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=1.9e-21 Score=200.32 Aligned_cols=344 Identities=20% Similarity=0.286 Sum_probs=254.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+.+.......+.|. +++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++..+..++.++....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~~~~~~ 84 (352)
T cd06174 7 GFFLSGLDRGLLSPALPLLA-EDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSLLLAFA 84 (352)
T ss_pred HHHHHHHhhhhhHhhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHHHHHHh
Confidence 45666666666666666665 57799999999999999999999999999999999 99999999999999999988877
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
+ +.+.++++|++.|++.+...+...+++.|.+|+++ |++.+++.+...++
T Consensus 85 ~------------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 85 S------------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred c------------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 2 27789999999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
|..++|.+++.+.+..+|++.|++.++..++..+......+ .
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~------------------------- 176 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLLR-------------L------------------------- 176 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-------------H-------------------------
Confidence 99999999999999889999999887776655544333210 0
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
............... ..+....+.+..+..
T Consensus 177 -------------------------------------------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 206 (352)
T cd06174 177 -------------------------------------------------LLLLALAFFLLSFGY-YGLLTYLPLYLQEVL 206 (352)
T ss_pred -------------------------------------------------HHHHHHHHHHHHhHH-HHHHHHHHHHHHHhc
Confidence 000000001111111 111111111111110
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
+.+ ....+.......+..++..++.+++.+|..+|. ..+..+.++..++.......
T Consensus 207 ~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~i~~~~~~~~--------- 262 (352)
T cd06174 207 GLS------AAEAGLLLSLFGLGGILGALLGGLLSDRLGRRR---------LLLLIGLLLAALGLLLLALA--------- 262 (352)
T ss_pred CCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------HHHHHHHHHHHHHHHHHHHh---------
Confidence 111 112344555666777777777777766655541 03677777777777766542
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
.+.+...+..++.+++.+...+...++..|..|++.|++.+|+.+....+|..+++.+.+.+.+.
T Consensus 263 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~----- 327 (352)
T cd06174 263 ----------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDT----- 327 (352)
T ss_pred ----------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----
Confidence 23556777889999999999999999999999999999999999999999999999999987531
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHhh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLVIYLI 536 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~ 536 (565)
.+ +...+.+.+++.+++.+..+.
T Consensus 328 -~~----------~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 328 -GG----------YGGVFLILAALALLAALLLLL 350 (352)
T ss_pred -cC----------cchHHHHHHHHHHHHHHHhee
Confidence 12 345677888888877766543
No 46
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=2e-21 Score=206.23 Aligned_cols=157 Identities=14% Similarity=0.210 Sum_probs=131.2
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.+++..++.......++. +.+++|.++.+.+++.+.+.+.+.+..+++|+++||+ ||||+++++.++.++++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~~~~~~~~~ 88 (393)
T PRK11195 11 AQFFSALADNALLFAAIA-LLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLLGCLLMLFG 88 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHHHHHHHHHH
Confidence 455655554444444444 4678999999999999999999999999999999999 99999999999999988887665
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.+ .++.|+++|++.+...|+..+++.|++|+++ |+++.++.....++
T Consensus 89 ~~---------------------------~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~~~~ 135 (393)
T PRK11195 89 IH---------------------------PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGSTIA 135 (393)
T ss_pred HH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHH
Confidence 21 2678999999999999999999999999988 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~ 215 (565)
|.++||.++|++.+. .|+..+.+.+.+.+++.
T Consensus 136 ~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 136 AILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999874 47777776655544443
No 47
>TIGR00898 2A0119 cation transport protein.
Probab=99.90 E-value=6.5e-22 Score=216.54 Aligned_cols=388 Identities=18% Similarity=0.148 Sum_probs=233.4
Q ss_pred HHHhhhcCCCC---chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 39 VTYLVGTMHLP---SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 39 ~~yl~~~l~~s---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
.+.+.+++|++ ..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++.+++.+
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~~~----------- 179 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFSPN----------- 179 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHccc-----------
Confidence 34567789998 89999999999999999999999999999 9999999999999999998888732
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
++.++++|++.|++.++..+....++.|++|+++ |+++.++......+|.++++.+++++.
T Consensus 180 -------------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~ 240 (505)
T TIGR00898 180 -------------YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIP 240 (505)
T ss_pred -------------HHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7889999999999999999999999999999998 999999998889999999998877664
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcc
Q 008450 196 DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQ 275 (565)
Q Consensus 196 ~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (565)
+ ||+.|++.++..++..+..++.++..+....++ ..++..+.+....+..+...+.. ... .+
T Consensus 241 ~---wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~~-~~~~a~~~l~~~~~~~~~~~~~~---~~~----------~~- 302 (505)
T TIGR00898 241 D---WRWLQLAVSLPTFLFFLLSWFVPESPRWLISQG-RIEEALKILQRIAKINGKKLPAE---VLS----------LS- 302 (505)
T ss_pred H---HHHHHHHHHHHHHHHHHHHHhcCCChHHHHHCC-CHHHHHHHHHHHHHHcCCCCCHH---HHh----------hh-
Confidence 3 999999888776655555443321110000111 11222222222222211110000 000 00
Q ss_pred hhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCc
Q 008450 276 FHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPA 355 (565)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (565)
.+. +... ......+ .+..++++........+.........+... .+ ..+ .. ....
T Consensus 303 ---~~~-----~~~~--~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~-~~---~~~~ 357 (505)
T TIGR00898 303 ---LEK-----DLSS--SKKQYSF----LDLFRTPNLRKTTLCLMMLWFTTAFSYYGL--VL-----DLG-NL---GGNI 357 (505)
T ss_pred ---hhh-----hhhh--ccCCCcH----HHHhCChHHHHHHHHHHHHHHHHHHHHHHH--hc-----ccc-cc---CCCh
Confidence 000 0000 0000000 000111111111111111111110110000 00 000 00 1111
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
.....+..+..+....+...+.|++.|| ..+.++.++.+++.+.+.+.. ....
T Consensus 358 ~~~~~~~~~~~i~~~~~~~~l~dr~grr----------~~~~~~~~~~~~~~l~~~~~~-----------------~~~~ 410 (505)
T TIGR00898 358 YLDLFISGLVELPAKLITLLLIDRLGRR----------YTMAASLLLAGVALLLLLFVP-----------------VDLY 410 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCH----------HHHHHHHHHHHHHHHHHHHcC-----------------CCch
Confidence 1222233334444455556666655554 235666666666666554431 1122
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccch
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGR 515 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~ 515 (565)
++.+...++.+++....++..+.+..|.+|++.|++++|+.++...+|++++|.+.+ +... +
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-----------------~ 472 (505)
T TIGR00898 411 FLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-----------------W 472 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-----------------H
Confidence 334445556667777778888999999999999999999999999999999999887 4211 1
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhcCCCCC
Q 008450 516 LDLFYGLLAILSIINLVIYLICAVWYKPKKP 546 (565)
Q Consensus 516 ~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~ 546 (565)
....+++++++.+++.++.++ .+|+++++.
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~-lpet~~~~l 502 (505)
T TIGR00898 473 LFLPLVLFGGLALLAGILTLF-LPETKGVPL 502 (505)
T ss_pred HhhHHHHHHHHHHHHHHHHHc-CcCCCCCCC
Confidence 133466677777766655443 456555443
No 48
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=5.8e-22 Score=214.36 Aligned_cols=374 Identities=9% Similarity=0.010 Sum_probs=225.0
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
..+.+.+++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..+++++++++++
T Consensus 41 ~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~------------- 106 (455)
T TIGR00892 41 FFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFSSN------------- 106 (455)
T ss_pred hHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHhhh-------------
Confidence 34556789999999999999999999999999999999999 9999999999999999999888733
Q ss_pred cccccCCcchhHHHHH-HHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 118 THTCEQASGFQMGVLY-IALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~-i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
.+.++ ..|++.|++.+...+....++.++++ ++ |+++.++.+...++|..++|.+++++.+
T Consensus 107 -----------~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~ 168 (455)
T TIGR00892 107 -----------VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFE 168 (455)
T ss_pred -----------HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 44454 45788999999877777788889885 55 9999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcch
Q 008450 197 EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQF 276 (565)
Q Consensus 197 ~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (565)
.+|||++|++.+++.+++.+..++..+..+.++...++.. . .. .+. .........
T Consensus 169 ~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----------~-~~-~~~------------~~~~~~~~~ 223 (455)
T TIGR00892 169 SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-----------E-GL-PPD------------GSTKKLSKK 223 (455)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-----------c-cC-CCC------------Ccccccccc
Confidence 9999999999887766555444443322111000000000 0 00 000 000000000
Q ss_pred hHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcc
Q 008450 277 HFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAG 356 (565)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (565)
...+ ...++. ..+..++++........+.....+......++ .+..+ ...+ ....+
T Consensus 224 ~~~~--------------~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~-~g~s------~~~~g 279 (455)
T TIGR00892 224 STAE--------------KINRFL--DFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLV-PYAKD-KGVD------EYEAA 279 (455)
T ss_pred chhh--------------hhhhhc--chHHhcCchHHHHHHHHHHHHHHccchHHHHH-HHHHH-cCCC------HHHHH
Confidence 0000 000000 00011111111111111111111111111111 11111 1111 11223
Q ss_pred hhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeeh
Q 008450 357 SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVF 436 (565)
Q Consensus 357 ~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 436 (565)
.+..+..+..++..++.+++.|+...+ ......+..+.++..+++++... ..+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~g~l~d~~~~~------~~~~~~~~~~~~~~~l~~ll~~~-------------------~~~~~ 334 (455)
T TIGR00892 280 FLLSIIGFVDIFARPSCGLIAGLKWIR------PHVQYLFSFALLFNGLTHLLCAL-------------------AGDYT 334 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccC------HHHHHHHHHHHHHHHHHHHHHHH-------------------hchHH
Confidence 344445555566666666665531111 01111222333333333333222 12345
Q ss_pred hhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchh
Q 008450 437 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 516 (565)
Q Consensus 437 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~ 516 (565)
++++..++.|++.+...+..++++.|.+|++.+|++.|+++....+|..+|+.+.+.+.+.. +++
T Consensus 335 ~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~---------------g~~ 399 (455)
T TIGR00892 335 GLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT---------------KNY 399 (455)
T ss_pred HHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhc---------------CCc
Confidence 56667788888888888999999999999999999999999999999999999998775321 113
Q ss_pred hHHHHHHHHHHHHHHH
Q 008450 517 DLFYGLLAILSIINLV 532 (565)
Q Consensus 517 ~~~f~~~a~l~lv~~~ 532 (565)
...|++.+++.+++.+
T Consensus 400 ~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 400 KYIFYASGSIVVSAGL 415 (455)
T ss_pred chHHHHhhHHHHHHHH
Confidence 4556666666666554
No 49
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=5.6e-21 Score=203.28 Aligned_cols=395 Identities=12% Similarity=0.021 Sum_probs=238.1
Q ss_pred CcccccCCCCCCCchh-hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHH
Q 008450 7 DAVDYKGSPADPSKTG-IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTI 85 (565)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~ 85 (565)
||.+--|.|+...... .+++..++.+....++++++ +++|.+..+.+++.+.+.++..++.++.|+++||+ ||||++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l 81 (402)
T TIGR00897 4 NNLQKIGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTM 81 (402)
T ss_pred ccHHHcCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHH
Confidence 5556566555444433 66777777676777888887 57899999999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHh
Q 008450 86 AIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE 165 (565)
Q Consensus 86 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 165 (565)
..+..+..++.+++..... .. .+.+.+++.|++.|+|.+...+...+.+.+.+|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~-------------------~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~--- 138 (402)
T TIGR00897 82 MIGLLLWCVGHAAFIVFGL-GH-------------------ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN--- 138 (402)
T ss_pred HHHHHHHHHHHHHHHHHhc-cC-------------------ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH---
Confidence 9999999888776543211 00 136778899999999998888888888999999888
Q ss_pred hhhhcceeehhhHHHHHHH-HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHH
Q 008450 166 KTQMAYFFSRFFFFISLGT-LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVA 244 (565)
Q Consensus 166 ~~~r~~~~~~~~~~~~lg~-~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (565)
|++++++.....++|. ++||.+++++.+.+||+..++......+++.++..+..++. + +|+..+.++
T Consensus 139 ---~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~------- 206 (402)
T TIGR00897 139 ---LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDI-F-TPQHMQTRE------- 206 (402)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCC-C-CcccccCCc-------
Confidence 9999999999999996 68999999999888977666654433333333333322211 0 111000000
Q ss_pred HHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHH
Q 008450 245 AIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTI 324 (565)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (565)
+ ..+ ..+.- ....++++........+....
T Consensus 207 -----------~---------------~~~---~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~ 236 (402)
T TIGR00897 207 -----------K---------------FSE---LGKAA---------------------TILFTNPNVLLGGMVRIINTI 236 (402)
T ss_pred -----------c---------------hhh---HHHHH---------------------HHHHcChhHHHHHHHHHHHHH
Confidence 0 000 00000 000111111111111111111
Q ss_pred HHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHH
Q 008450 325 IFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSI 404 (565)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~ 404 (565)
..+....+.+ .+... ...+. ...+.+.....+..++..++.+++.||+.+|.. . +..+.+...
T Consensus 237 ~~~~~~~~~p-~~~~~-~g~s~------~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~-------~--~~~~~l~~~ 299 (402)
T TIGR00897 237 GLFGFAVFLP-MFVAE-LGFST------SEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT-------V--RWFGGVGCG 299 (402)
T ss_pred HHHHHHHHHH-HHHHH-cCCCh------hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH-------H--HHHHHHHHH
Confidence 1111111121 22211 11111 112233344455666777777888776654411 1 122222222
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHH
Q 008450 405 VGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGF 484 (565)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~ 484 (565)
++...+...... ...+.+..++..++.+++.....+. .....+..| +.||++.|+.+....+|+
T Consensus 300 ~~~~~l~~~~~~--------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~~g~~~g~~~~~~~lg~ 363 (402)
T TIGR00897 300 IFTLALYYIPQH--------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KHKGAAMSVLNLSAGLSA 363 (402)
T ss_pred HHHHHHHHHHHc--------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-chhHHHHHHHHHHHHHHH
Confidence 222222211100 0123344556677777777665443 455566655 579999999999999999
Q ss_pred HHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhh
Q 008450 485 FVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 485 ~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
.++|.+.+.+.+.. + +...|++.+++.+++.++..+.
T Consensus 364 ~~gp~i~g~l~~~~------g----------~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 364 FLAPAIAVLFIGFF------G----------AIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHHHhhc------c----------hHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999886432 1 3456778888877777665544
No 50
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.90 E-value=4e-21 Score=207.61 Aligned_cols=157 Identities=11% Similarity=0.031 Sum_probs=128.0
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
+...+|+.++ |++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++.+++.++++++....
T Consensus 49 ~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~~~~~~~~~~~--------- 117 (452)
T PRK11273 49 ALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVMLFMGFVPWAT--------- 117 (452)
T ss_pred HHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHHHHHHhhhccc---------
Confidence 3456788877 99999999999999999999999999999999 999999999999999988887762100
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH-HHHHHHHHHh
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT-LMAVTVLVYI 194 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~-~lg~~i~g~l 194 (565)
.+...+++.|++.|++.|...|.....+.|++|+++ |++++++++...++|. +.+|+++..+
T Consensus 118 -----------~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~l~~~~~ 180 (452)
T PRK11273 118 -----------SSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAHNVGGGLPPLLFLLGM 180 (452)
T ss_pred -----------ccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 136778899999999999998988899999999888 9999999999988886 4566554444
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHh
Q 008450 195 QDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 195 ~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
....+||+.|++.+++.++..++.+.
T Consensus 181 ~~~~gw~~~f~i~~~~~~~~~~l~~~ 206 (452)
T PRK11273 181 AWFNDWHAALYMPAFAAILVALFAFA 206 (452)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 34459999999987766554444333
No 51
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=5.2e-21 Score=205.93 Aligned_cols=369 Identities=10% Similarity=0.129 Sum_probs=212.2
Q ss_pred HHhhhcC--CCCchhhhhHH-----HHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 40 TYLVGTM--HLPSATSANIV-----TDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 40 ~yl~~~l--~~s~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
.++.+++ +.++. .+++. +...++..+++++.|+++||+ |||+++.++.++++++++++++++++..
T Consensus 47 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~----- 119 (438)
T PRK09952 47 LVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRMLMLTVWMMGIATALIGLLPSFST----- 119 (438)
T ss_pred HHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHHHHHHHHHHHHHHHHhcCCcHHH-----
Confidence 3455554 56665 35543 234456778889999999999 9999999999999999999999844221
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
.....+..++++|+++|++.|+..|....++.|++|+++ |++..+....+..+|.+++..+..
T Consensus 120 -----------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~~~~~~~g~~~G~~l~~~~~~ 182 (438)
T PRK09952 120 -----------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------KAFYSSGVQVGYGVGLLLSTGLVS 182 (438)
T ss_pred -----------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 001123368899999999999999999999999999998 999999888888888888877766
Q ss_pred Hhc--------ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCC
Q 008450 193 YIQ--------DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDT 264 (565)
Q Consensus 193 ~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (565)
++. ..+|||++|++.++..++++.+ +... ++.|+ ..+ .+.+..+ . +
T Consensus 183 ~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l----~~~~-~es~~---~~~--------~~~~~~~-~-~-------- 236 (438)
T PRK09952 183 LISMMTTDEQFLSWGWRIPFLFSIVLVLIALWV----RNGM-EESAE---FEQ--------QQHEQAA-A-K-------- 236 (438)
T ss_pred HHHHhCCHHHhhccChHHHHHHHHHHHHHHHHH----HHhC-CCChh---HHH--------HHhhccc-c-c--------
Confidence 654 3579999999877654432211 1111 11110 000 0000000 0 0
Q ss_pred ccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHH-HHHHHHHhhhcccchhhhhhhhc
Q 008450 265 PEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIW-ATTIIFWTTYAQMITFSVEQATT 343 (565)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 343 (565)
+ +.++ .....++++......... ......+....+.+. +..+..+
T Consensus 237 ---------~---------------------~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-y~~~~~g 282 (438)
T PRK09952 237 ---------K---------------------RIPV---IEALLRHPGAFLKIIALRLCELLTMYIVTAFALN-YSTQNLG 282 (438)
T ss_pred ---------c---------------------cCCH---HHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcC
Confidence 0 0000 000011222222111111 111112221111111 1111111
Q ss_pred ccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 344 MERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARA 423 (565)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~ 423 (565)
.+.. .......+......+..++.+++.|++.+| +.+..+.++..++...+......
T Consensus 283 ~s~~------~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr----------~~~~~~~~~~~~~~~~~~~~~~~------- 339 (438)
T PRK09952 283 LPRE------LFLNIGLLVGGLSCLTIPCFAWLADRFGRR----------RVYITGALIGTLSAFPFFMALEA------- 339 (438)
T ss_pred CCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCch----------HHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 1111 001122233344455667778887776655 12344444444433322221100
Q ss_pred cCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHH-HHHHHHHhhHHhhhhhhcccCCC
Q 008450 424 VGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTT-LSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 424 ~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~-~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
......++...++.+++.+...+..+.++.|.+|++.|+++.|+.+.. +.+++.++|.+.+.+.+.++
T Consensus 340 --------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~--- 408 (438)
T PRK09952 340 --------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG--- 408 (438)
T ss_pred --------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 112223344556667777777888899999999999999999996554 45889999999888754221
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHHHHhhh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
++| ...+...+++++++++..+..
T Consensus 409 -~~~----------~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 409 -GSW----------HSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred -CCc----------hHHHHHHHHHHHHHHHHHHHc
Confidence 122 345666777777777666544
No 52
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.90 E-value=1.2e-21 Score=204.44 Aligned_cols=156 Identities=13% Similarity=0.044 Sum_probs=137.5
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
......+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++.+
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~--------- 82 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFSTS--------- 82 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHhhh---------
Confidence 344556678899999999999999999999999999999999999 9999999999999999999988732
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH-HHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV-TVLV 192 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~-~i~g 192 (565)
.+.++++|++.|++.+...+...+++.|++|+++ |++++++.....++|..+++ .+++
T Consensus 83 ---------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 83 ---------------LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred ---------------HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHH
Confidence 7789999999999999999999999999999988 99999999999999999999 5777
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.+.+..+|++.|++.+++.++..++.+.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 142 GIAELYSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HHHhcCCchhHHHHHHHHHHHHHHHHhe
Confidence 7778889999999887666554444333
No 53
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=3.4e-21 Score=202.64 Aligned_cols=363 Identities=14% Similarity=0.061 Sum_probs=221.0
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
......+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++..++.++++++.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~---------- 103 (398)
T TIGR00895 35 AMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFSVFTLLCALAT---------- 103 (398)
T ss_pred HHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHcc----------
Confidence 445566777889999999999999999999999999999999999 999999999999998888887763
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.....++|..+++.++++
T Consensus 104 --------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~ 163 (398)
T TIGR00895 104 --------------NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMFCGYPIGAAVGGFLAGW 163 (398)
T ss_pred --------------chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHhhHHHHHHHHHHHHHHH
Confidence 26778999999999999999999999999999888 9999999999999999999999999
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCC
Q 008450 194 IQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHT 273 (565)
Q Consensus 194 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (565)
+.+..+|++.|++.++..++..++.+...++.++...++++ ++..+... ....+.. .+..+.. .. ...
T Consensus 164 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~--~~~~~~~-------~~-~~~ 231 (398)
T TIGR00895 164 LIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRIVN-AIAPQMQ--AEAQSAL-------PE-QKA 231 (398)
T ss_pred HhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHHHH-HHHHhcc--ccccccc-------cc-ccc
Confidence 99999999999988655444433333332221110000111 11000000 0000000 0000000 00 000
Q ss_pred cchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccccccc
Q 008450 274 EQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQI 353 (565)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (565)
+.... +..++.... ....++......................+ +..+....+ ..
T Consensus 232 ~~~~~-----------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~------~~ 285 (398)
T TIGR00895 232 TQGTK-----------------RSVFKALFQ-GKTARITVLLWLLYFMLLVGVYFLTNWLP--KLMVELGFS------LS 285 (398)
T ss_pred ccchh-----------------hHHHHHHhc-chhHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcCCC------HH
Confidence 00000 000000000 00001111111111111111111111111 111111111 11
Q ss_pred CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcce
Q 008450 354 PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV 433 (565)
Q Consensus 354 ~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (565)
..+.......+..++..++.+++.|++.+| .+..+..+..+....+... ..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~------------------~~ 336 (398)
T TIGR00895 286 LAATGGALFNFGGVIGSIIFGWLADRLGPR-----------VTALLLLLGAVFAVLVGST------------------LF 336 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----------HHHHHHHHHHHHHHHHHHH------------------hh
Confidence 223344445555666667777776554433 1333333333332222221 11
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
+.....+..++.+++.+...+..+++..|.+|++.||++.|+.+....+|..+|+.+.+.+
T Consensus 337 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 337 SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 3334556777888888888999999999999999999999999999999999999988754
No 54
>PRK03699 putative transporter; Provisional
Probab=99.90 E-value=5e-21 Score=203.06 Aligned_cols=355 Identities=13% Similarity=0.117 Sum_probs=225.4
Q ss_pred HHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 35 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 35 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
...+.+.+.+++|+|..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++.+++++++
T Consensus 26 ~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~l~~~~~----------- 93 (394)
T PRK03699 26 TGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALMILAVAGLMFSH----------- 93 (394)
T ss_pred HhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHcc-----------
Confidence 33445557789999999999999999999999999999999999 999999999999999999888873
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
+.+.+++.|+++|++.|...+...+++.|++|+++ |+++.+..+...++|..++|.+.+++
T Consensus 94 -------------~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 94 -------------SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred -------------hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37779999999999999999999999999998887 99999888888889999999988877
Q ss_pred c-ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCC
Q 008450 195 Q-DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHT 273 (565)
Q Consensus 195 ~-~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (565)
. +..|||+.|.+.++..++..++.+... .++ ++++++ + . . .
T Consensus 155 ~~~~~gw~~~f~~~~~~~~~~~~~~~~~~--~p~-~~~~~~-~--------------~----~---------------~- 196 (394)
T PRK03699 155 LARSIEWYWVYACIGLVYVAIFILTLFSE--FPA-LGKHAP-K--------------A----D---------------K- 196 (394)
T ss_pred HhccccHHHHHHHHHHHHHHHHHHHHhcC--Ccc-ccccCc-c--------------c----c---------------C-
Confidence 5 457999999987776555444333211 111 000000 0 0 0 0
Q ss_pred cchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccccccc
Q 008450 274 EQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQI 353 (565)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (565)
+ +.+..| +++........+...........+.+ .+..+....+..
T Consensus 197 ~-------------------~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p-~~l~~~~g~s~~------ 241 (394)
T PRK03699 197 P-------------------VAKEKW---------GIGVLFLAIAALLYILAQLTFISWVP-EYAQKKFGMSLE------ 241 (394)
T ss_pred c-------------------cccccC---------ChHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCChH------
Confidence 0 000001 01111111111111111112212222 222221122111
Q ss_pred CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcce
Q 008450 354 PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV 433 (565)
Q Consensus 354 ~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (565)
..+.+.....+...+...+.+++.||+.+| +.+..+..+..+.+.++.. ..
T Consensus 242 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~----------~~l~~~~~~~~~~~~~~~~-------------------~~ 292 (394)
T PRK03699 242 DAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ----------RILTVLAGLALVLMYLFVN-------------------TD 292 (394)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhchh----------hHHHHHHHHHHHHHHHHHH-------------------cC
Confidence 123333444455566666777776655443 1233333343333333322 12
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccccc
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINR 513 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~ 513 (565)
+..++.+..++.|++....++...++..+..|++ +++..+.......+|..++|.+.+.+.+.. +
T Consensus 293 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~------g-------- 357 (394)
T PRK03699 293 DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-SPKLVNFILTCGTIGTMLTFVVTSPIVAHF------G-------- 357 (394)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CHHHHHHHHHhhhHHHHHHHHHHHHHHHHh------C--------
Confidence 3344555666777777777788888888877755 677888888888999999999999886422 1
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 514 GRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 514 ~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
+...+++.+++.++..+..++..+
T Consensus 358 --~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 358 --LQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred --chhhhhhhHHHHHHHHHHHHHHHH
Confidence 244566666666666655444433
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.89 E-value=1e-20 Score=200.65 Aligned_cols=371 Identities=14% Similarity=0.109 Sum_probs=217.0
Q ss_pred CCCCchh--hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHH-HHHHHHhhhHHHhhccccchhHHH-HHHHH
Q 008450 16 ADPSKTG--IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIA-IFAAV 91 (565)
Q Consensus 16 ~~~~~~~--~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~-~~~~~ 91 (565)
++|.-++ ..++.+++.....+.++.|+.+++|.+.++.|++.+.+.+ +..+.++++|+ +||+ ||||.++ .+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 4444443 6778888888888999999999999999999999887655 55555555666 9999 8888754 55555
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHH-HHHHHHhccccccchhhhhhccCCCCChHhhhhhc
Q 008450 92 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIA-LYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMA 170 (565)
Q Consensus 92 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~-r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 170 (565)
..++..+.+++++ .+.+++. +++.+.+ +...|....+..|+.++++. ..+
T Consensus 92 ~~~~~~~~~~~~~------------------------~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~ 142 (393)
T PRK15011 92 GVLACTLFAWNRN------------------------YFVLLFVGVFLSSFG-STANPQMFALAREHADKTGR----EAV 142 (393)
T ss_pred HHHHHHHHHHhhH------------------------HHHHHHHHHHHHHHH-HhhHHHHHHHHHHHhhhccc----hHH
Confidence 5566666666632 4555444 4444444 46677888888887655440 023
Q ss_pred ceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcc
Q 008450 171 YFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 250 (565)
Q Consensus 171 ~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (565)
...++.+...++|.++||.+++++.+++|||..|++.++..++..+..+...|+.++++++...
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 206 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG---------------- 206 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc----------------
Confidence 4457788889999999999999999989999999988776665544444333322111110000
Q ss_pred ccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHH-HHHHHHHHhh
Q 008450 251 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPI-WATTIIFWTT 329 (565)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 329 (565)
+.+. . + ++++........ ......+..
T Consensus 207 -----~~~~-----------------------------------~-------~----~~~~~~~~~~~~~~~~~~~~~~- 234 (393)
T PRK15011 207 -----TLEA-----------------------------------P-------R----RNRRDTLLLFVICTLMWGTNSL- 234 (393)
T ss_pred -----cccc-----------------------------------c-------c----cccccHHHHHHHHHHHHHHHHH-
Confidence 0000 0 0 000101101001 111111111
Q ss_pred hcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHH
Q 008450 330 YAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAA 409 (565)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~ 409 (565)
+....+.+..+..+.+. ...+.+.....+..++...+.+++.||+.+| +.+..+.+...+.+..
T Consensus 235 ~~~~~p~~l~~~~~~~~------~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~----------~~~~~~~~~~~~~~~~ 298 (393)
T PRK15011 235 YIINMPLFIINELHLPE------KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR----------FLMRVAAVAGVCFYAG 298 (393)
T ss_pred HHHHHHHHHHHHcCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH----------HHHHHHHHHHHHHHHH
Confidence 11111122222111111 1122333333444455667778887776554 1234444444433332
Q ss_pred HHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhH
Q 008450 410 AALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSF 489 (565)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~ 489 (565)
.... .++++.+...++.+++.+...+....+..|..|++ ||+++++++....+|..+++.
T Consensus 299 ~~~~-------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~ 358 (393)
T PRK15011 299 MLMA-------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGS 358 (393)
T ss_pred HHHH-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHH
Confidence 2211 12333444555565666666666667778888865 999999999989999999999
Q ss_pred HhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhh
Q 008450 490 LVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 490 l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~ 537 (565)
+++.+.+.. ++...|++.+++.++++++++..
T Consensus 359 l~G~i~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 359 LAGIVAEIW----------------NYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHh----------------hhHHHHHHHHHHHHHHHHHHHhh
Confidence 999875321 13556777777777776665544
No 56
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.89 E-value=4.5e-21 Score=208.54 Aligned_cols=152 Identities=13% Similarity=0.109 Sum_probs=124.4
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
.+.+++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++.++++++++
T Consensus 57 ~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~~~~~~~~~~~s------------ 123 (476)
T PLN00028 57 PLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTAPAVFCMSLVSS------------ 123 (476)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHhcC------------
Confidence 344577889999999999999999999999999999999999 9999999999999999888887733
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc-
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ- 195 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~- 195 (565)
...++++|++.|++.+... ....+++|++|+++ |++++++.....++|..+++.+.+.+.
T Consensus 124 ------------~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~g~~~~~~~~g~~~~~~~~~~i~~ 184 (476)
T PLN00028 124 ------------ATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTANGIAAGWGNLGGGVTQLLMPLVFP 184 (476)
T ss_pred ------------HHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6678899999999988764 45567899999998 999999988877888877766665442
Q ss_pred ---c-----cccchhhHHHHHHHHHHHHHHHHh
Q 008450 196 ---D-----EISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 196 ---~-----~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+ ..|||+.|++.+++.++..+..++
T Consensus 185 ~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 185 LIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 1 258999999988776655444443
No 57
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.89 E-value=1.4e-20 Score=197.85 Aligned_cols=155 Identities=15% Similarity=0.169 Sum_probs=136.3
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
..+.++.+ .+++|+++.+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..++..++.+++
T Consensus 10 ~~p~~~~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~~---------- 77 (377)
T PRK11102 10 YLPALPVI-AADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALAQ---------- 77 (377)
T ss_pred HhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHHc----------
Confidence 34555555 467999999999999999999999999999999999 999999999999999999988773
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
+.+.+.+.|++.|++.+...+...+++.|.+|+++ |++++++.+...++|..++|.++++
T Consensus 78 --------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~ 137 (377)
T PRK11102 78 --------------TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGW 137 (377)
T ss_pred --------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 26778999999999999999999999999999888 9999999999999999999999999
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 194 IQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 194 l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+.+..+|++.|++.++..++..++...
T Consensus 138 l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (377)
T PRK11102 138 LLVWFSWHAIFWVLALAAILAAALVFF 164 (377)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHHHHH
Confidence 999899999999877766655444333
No 58
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=3.3e-21 Score=210.37 Aligned_cols=151 Identities=17% Similarity=0.207 Sum_probs=135.2
Q ss_pred hHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 008450 31 TMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRP 110 (565)
Q Consensus 31 ~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 110 (565)
.+.....+.+++.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.++++++.+
T Consensus 35 ~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~------ 107 (496)
T PRK03893 35 DFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVLFSVGTLACGFAPG------ 107 (496)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhH------
Confidence 344555566778889999999999999999999999999999999999 9999999999999999999888733
Q ss_pred CCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHH
Q 008450 111 RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV 190 (565)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i 190 (565)
.+.++++|++.|++.++..+....++.|.+|+++ |++++++.....++|..+++.+
T Consensus 108 ------------------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~ 163 (496)
T PRK03893 108 ------------------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFLISGFSIGAVVAAQV 163 (496)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 7779999999999999999999999999999988 9999999999999999999999
Q ss_pred HHHhcccccchhhHHHHHHHHH
Q 008450 191 LVYIQDEISRSVGYGICSVAMF 212 (565)
Q Consensus 191 ~g~l~~~~gw~~~f~i~~~~~~ 212 (565)
.+++.+.++||+.|++..+..+
T Consensus 164 ~~~l~~~~~w~~~f~~~~~~~~ 185 (496)
T PRK03893 164 YSLVVPVWGWRALFFIGILPII 185 (496)
T ss_pred HHHHhccCCHHHHHHHHHHHHH
Confidence 9999999999999987544433
No 59
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.89 E-value=3.6e-21 Score=205.89 Aligned_cols=399 Identities=11% Similarity=0.041 Sum_probs=232.3
Q ss_pred cccCCCCCCCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHH
Q 008450 10 DYKGSPADPSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 89 (565)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 89 (565)
+++.+|.+-.-....++..+++....+.++.|+.+++|++..+.|++.+.+.++..+++++.|+++||+ |||+++.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~ 83 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWII 83 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHH
Confidence 344455555555577888888888899999999999999999999999999999999999999999999 9999998876
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhh
Q 008450 90 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM 169 (565)
Q Consensus 90 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 169 (565)
.+..++..........+. . ......+..+.++..+...+...+.+.++.++.. +++
T Consensus 84 ~~~~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 139 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPL-------------------L-QYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRS 139 (420)
T ss_pred HHHHHHHHHHHHHHHHHH-------------------H-HHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhc
Confidence 665554432211100000 0 0001122222233333333333333333332111 127
Q ss_pred cceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhc
Q 008450 170 AYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKR 249 (565)
Q Consensus 170 ~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (565)
+..++..+...++|.+++|.+++++.+ .+|+++|++.++..++++++.+...++.+++ ++.++.+
T Consensus 140 g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------------- 204 (420)
T PRK09528 140 GFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPST-AKVANAL------------- 204 (420)
T ss_pred cccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccch-hhhccch-------------
Confidence 778888888899999999999999876 5899999988777666555554433321110 0000000
Q ss_pred cccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhh
Q 008450 250 KMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTT 329 (565)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (565)
. + ..+...+.+... ..++++.....+........+...
T Consensus 205 -~--~-----------------~~~~~~~~~~~~----------------------~l~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 205 -G--A-----------------NASAVSLKDALA----------------------LLKLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred -h--c-----------------ccccccHHHHHH----------------------HccCCCeEeehHHHHHHHHHHHHH
Confidence 0 0 000000000000 001111111111111111111111
Q ss_pred hcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHH
Q 008450 330 YAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAA 409 (565)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~ 409 (565)
..+.+. +..+. ..+.... ....+.+..+..+...+..++.+++.||+.+| +.+..+.++..++...
T Consensus 243 ~~~~~~-~~~~~-~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~----------~~~~~~~~l~~~~~~l 308 (420)
T PRK09528 243 DQQFPN-FFASF-FATPEQG--TRVFGYLNSFQVFLEALIMFFAPFIINRIGAK----------NALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHH-HHHHH-HhccCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc----------hhhHHHHHHHHHHHHH
Confidence 122222 21111 0010100 01123344445555667777778887766655 2256666666666666
Q ss_pred HHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHH-HHHHHHHHHHHhh
Q 008450 410 AALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL-FLTTLSLGFFVSS 488 (565)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~lg~~ig~ 488 (565)
+.+. .++++++...++.+++.....+....++.+..|++.+++..++ +++...+|..+++
T Consensus 309 ~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~ 369 (420)
T PRK09528 309 SGFA-------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLS 369 (420)
T ss_pred HHhc-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHH
Confidence 5542 2445566677888888877777888899999999999988766 6777889999999
Q ss_pred HHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 489 FLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 489 ~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
.+.+.+.+.. | +...|.+.+++.++..++.+...+
T Consensus 370 ~~~G~l~~~~------G----------~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 370 TLAGNLYDSI------G----------FQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred HHHHHHHHhh------C----------chHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999886421 1 356778778877777666555443
No 60
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=7.8e-21 Score=201.29 Aligned_cols=148 Identities=17% Similarity=0.125 Sum_probs=130.4
Q ss_pred HHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCc
Q 008450 39 VTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETAT 118 (565)
Q Consensus 39 ~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (565)
.+++.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++.+++
T Consensus 31 ~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~--------------- 94 (394)
T PRK11652 31 IADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIFILGTLVALFAH--------------- 94 (394)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHHHHHHHHHHHc---------------
Confidence 4556789999999999999999999999999999999999 999999999999999888887762
Q ss_pred ccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccc
Q 008450 119 HTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI 198 (565)
Q Consensus 119 ~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~ 198 (565)
+.+.+++.|++.|++.+...+....+..|.+++++ ++++.++...+..+|..+||.+++++.+..
T Consensus 95 ---------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 159 (394)
T PRK11652 95 ---------SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANSLLNMGILVSPLLAPLIGGLLTTLF 159 (394)
T ss_pred ---------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 27779999999999999888888889999888877 899999998999999999999999999989
Q ss_pred cchhhHHHHHHHHHHHHHH
Q 008450 199 SRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 199 gw~~~f~i~~~~~~~~~~~ 217 (565)
|||+.|++.++..++..+.
T Consensus 160 g~~~~f~~~~~~~~~~~~~ 178 (394)
T PRK11652 160 GWRACYLFLLLLGAGVTFS 178 (394)
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 9999999877665544333
No 61
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.7e-21 Score=197.62 Aligned_cols=378 Identities=15% Similarity=0.067 Sum_probs=242.1
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
..+++.++.++|..|.|++.+++.+++.++-.+.|.++||. +.|+.+-+++++.++..+++.++++
T Consensus 51 a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs~s------------- 116 (448)
T COG2271 51 AMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFSPS------------- 116 (448)
T ss_pred ccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhhhH-------------
Confidence 45666677889999999999999999999999999999999 9999999999999999999999854
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH--HHhc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL--VYIQ 195 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~--g~l~ 195 (565)
...+.+.-++.|...|.-.|.....++.++|.++ ||+..++.+.+-|+|..+.|++. +++.
T Consensus 117 -----------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~siWn~shNiGGal~~~~~~la~~~ 179 (448)
T COG2271 117 -----------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSIWNTSHNIGGALAPLVALLAFFA 179 (448)
T ss_pred -----------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEEehhhhhcccchHHHHHHHHHHH
Confidence 7779999999999999999999999999999999 99999999999999999999999 9999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCc-hHHHHHHHHHHHHhccccCCCCcCccccCCccccc--cCC
Q 008450 196 DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSP-IVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASR--IHH 272 (565)
Q Consensus 196 ~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 272 (565)
.+.+||..|++++++.++..++.++..+..+.+ .+-| .++ +..|+.+.. ...
T Consensus 180 ~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs--~GLP~ie~-----------------------~~~d~~e~~~~~~~ 234 (448)
T COG2271 180 FHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS--EGLPPIEE-----------------------YRGDPLEIYEEEKE 234 (448)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhCCCccc--cCCCCHHH-----------------------hhcCchhhhhhhcc
Confidence 999999999999988765544444433322111 1111 111 110110000 000
Q ss_pred CcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccc
Q 008450 273 TEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQ 352 (565)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (565)
.+..+..+.. .+-+...|.+..+.......-+.-.......+.+..+..+++..
T Consensus 235 ~~~ls~~~i~---------------------~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~----- 288 (448)
T COG2271 235 NEGLTAWQIF---------------------VKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLV----- 288 (448)
T ss_pred CCCccHHHHH---------------------HHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHH-----
Confidence 0000000000 00111112222111111110011111122223455555444433
Q ss_pred cCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcc
Q 008450 353 IPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLP 432 (565)
Q Consensus 353 ~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (565)
...+...+.....+....+.+++.|++.+..+ .+. -.+.+++..++++.+-.. .+
T Consensus 289 -~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR-----~p~--~~i~~~~i~~~~~~~w~~-----------------~~ 343 (448)
T COG2271 289 -KANWAISLFEVAGLPGTLLAGWLSDKLFKGRR-----GPM--ALIFMLLITASLVLYWLA-----------------PN 343 (448)
T ss_pred -HHHHHHHHHHHHhhHHHHHHHHHHHHhccccc-----chH--HHHHHHHHHHHHHHHHcC-----------------CC
Confidence 34455566677788888889999988875421 111 122222233333322211 01
Q ss_pred eeehhhHHHHHHHHHHHHHhhhh--hHhhhhccCCchhhHHHHHHHHHHHHH-HHHHhhHHhhhhhhcccCCCCCCcccc
Q 008450 433 VSVFLLIPQFFLVGAGEAFIYTG--QLDFFITKSPKGMKTMSTGLFLTTLSL-GFFVSSFLVAVVKKVTGSKGGGGWLAD 509 (565)
Q Consensus 433 ~s~~~li~~~~l~g~g~~~~~~~--~~~~~~~~~P~~~rg~~~gl~~~~~~l-g~~ig~~l~~~l~~~~~~~~~~~w~~~ 509 (565)
.++....++++..|+ ....|- .-....|.+|++..|+++|+...+..+ |.+.+....+++.+. -||
T Consensus 344 ~~~~l~~~~l~~iGf--~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~------~gW--- 412 (448)
T COG2271 344 GSYLLDAILLFIIGF--LIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADT------WGW--- 412 (448)
T ss_pred ccHHHHHHHHHHHHH--HHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEec------CCC---
Confidence 233444444444443 332332 233567999999999999999999888 888888777766432 355
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 510 NINRGRLDLFYGLLAILSIINLVIYLICAVW 540 (565)
Q Consensus 510 ~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~ 540 (565)
...|.++.+.++++.++++.....
T Consensus 413 -------~g~Fi~~~~~a~l~~lll~~~~~~ 436 (448)
T COG2271 413 -------DGGFIVLSIAALLAILLLLPVWNA 436 (448)
T ss_pred -------cchHHHHHHHHHHHHHHHHHHHhh
Confidence 456788888888887777666544
No 62
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.89 E-value=1.6e-20 Score=198.31 Aligned_cols=147 Identities=12% Similarity=0.179 Sum_probs=127.4
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+....+.+.++.|+. ++|.|..+.|++.+.+.++..+++++.|+++||+ |||+++.++.++.+++..+++++
T Consensus 14 ~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~~~~~~~~~~ 91 (381)
T PRK03633 14 GLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFAAGCAGLGLM 91 (381)
T ss_pred HHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 455665665556666776654 7899999999999999999999999999999999 99999999999999999988887
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
++ ++.++++|+++|++.+...|...+.+.|..++++ |+++++++....++
T Consensus 92 ~~------------------------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 141 (381)
T PRK03633 92 VG------------------------FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYMMVYYL 141 (381)
T ss_pred cc------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHH
Confidence 32 7789999999999999998888888888888877 99999999999999
Q ss_pred HHHHHHHHHHHhcccccch
Q 008450 183 GTLMAVTVLVYIQDEISRS 201 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~ 201 (565)
|..+|+.+++++.+...|.
T Consensus 142 g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 142 GTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHhcccccccch
Confidence 9999999999987754333
No 63
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.89 E-value=2.6e-20 Score=199.25 Aligned_cols=382 Identities=14% Similarity=0.088 Sum_probs=224.4
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
...+.+++|+.+++|++..|.|++.+.+.++..++++++|+++||+.+||+++.++.++..++..+..+.++
T Consensus 20 ~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~-------- 91 (418)
T TIGR00889 20 SWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTT-------- 91 (418)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 344889999999999999999999999999999999999999999834577888888777777777766532
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCC-h-HhhhhhcceeehhhHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKD-E-KEKTQMAYFFSRFFFFISLGTLMAVTV 190 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~-~-~~~~~r~~~~~~~~~~~~lg~~lg~~i 190 (565)
++.+++.|++.|++.+...+...++..+...+.. + .+.-.|.+.++ ++|.++||.+
T Consensus 92 ----------------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l 149 (418)
T TIGR00889 92 ----------------PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWA 149 (418)
T ss_pred ----------------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHH
Confidence 6678888999999888777776665543332110 0 00001444443 5789999999
Q ss_pred HHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCcccccc
Q 008450 191 LVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRI 270 (565)
Q Consensus 191 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (565)
+|.+.....|+ +|++.++..++..++.+ ..++.++ ++++++ .+. +
T Consensus 150 ~g~l~~~~~~~-~f~~~~~~~~~~~~~~~-~~~e~~~-~~~~~~-~~~--------~----------------------- 194 (418)
T TIGR00889 150 VSLLDIELSNI-QLYITAGSSALLGVFAL-TLPDIPV-AKSTAK-MSI--------K----------------------- 194 (418)
T ss_pred HHHhcccchhH-HHHHHHHHHHHHHHHHh-cCCCCCC-Cccccc-cCH--------H-----------------------
Confidence 99884433344 45555555444433322 2222111 000000 000 0
Q ss_pred CCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccc-
Q 008450 271 HHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIG- 349 (565)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 349 (565)
+....+. . ...++++........+.......... .....+..+. ..+....
T Consensus 195 -~~~~~~~---~----------------------~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-g~~~~~~~ 246 (418)
T TIGR00889 195 -VMLGLDA---F----------------------ILFKNKRMAIFFFFSMLLGAPLQITN-IFGNGFLHEF-GRNPEFAD 246 (418)
T ss_pred -HHhhhhH---H----------------------HHhcCCCeeeHHHHHHHHHhHHHHHH-HhHHHHHHHh-cccccccc
Confidence 0000000 0 00011111111111111111111111 1111121111 1010000
Q ss_pred ccc-cCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 350 RFQ-IPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTT 428 (565)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (565)
++. ...+....+..+..++...+.+++.|++.+| +.+.++.++..+++..+.....
T Consensus 247 ~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r----------~~l~~~~~~~~v~~~l~~~~~~------------- 303 (418)
T TIGR00889 247 SFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK----------KVMLLSLVAWALRFGFFAYGDP------------- 303 (418)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHcCc-------------
Confidence 000 1123344555556666667777776666554 3467777777777665544210
Q ss_pred CCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHH-HHHHHHHHHhhHHhhhhhhcccCCCCCCcc
Q 008450 429 ATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAVVKKVTGSKGGGGWL 507 (565)
Q Consensus 429 ~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~ 507 (565)
.....+.+++..++.+++++...+....++.|.+|++.||+++|+.+ ....+|..+|+.+.+.+.+..+..+..+
T Consensus 304 --~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~-- 379 (418)
T TIGR00889 304 --EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFD-- 379 (418)
T ss_pred --chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCc--
Confidence 01123345567888999998888998999999999999999999997 5678999999999998875432111112
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 508 ADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 508 ~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
+...|.+.+++.++..++++++.++..
T Consensus 380 --------~~~~f~~~~~~~~i~~~l~~~~~~~~~ 406 (418)
T TIGR00889 380 --------WQTMWLFFAGYIAILAVLFMIFFKYSH 406 (418)
T ss_pred --------hHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 356788888888888888777776653
No 64
>PRK11043 putative transporter; Provisional
Probab=99.89 E-value=2.7e-20 Score=197.60 Aligned_cols=148 Identities=14% Similarity=0.195 Sum_probs=130.8
Q ss_pred hhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccc
Q 008450 42 LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTC 121 (565)
Q Consensus 42 l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 121 (565)
+.+++|.++.+.+++.+.+.++..++.+++|+++||+ |||+++..+..+..++.++++++.
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~------------------ 92 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWVE------------------ 92 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHhc------------------
Confidence 6789999999999999999999999999999999999 999999999999998888888773
Q ss_pred cCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccch
Q 008450 122 EQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRS 201 (565)
Q Consensus 122 ~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~ 201 (565)
+.+.+++.|+++|++.+...+...+++.|++|+++ +++.++......++|..++|.+++++.+..|||
T Consensus 93 ------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~ 160 (401)
T PRK11043 93 ------SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPLLGAWLLNHFGWQ 160 (401)
T ss_pred ------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChH
Confidence 27778999999999998888888899999999887 888888888888999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 008450 202 VGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 202 ~~f~i~~~~~~~~~~~~~~ 220 (565)
+.|++.++..++..+..+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 161 AIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999887766655544443
No 65
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.89 E-value=5.1e-20 Score=194.54 Aligned_cols=360 Identities=10% Similarity=0.025 Sum_probs=224.1
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHH-HHHHH-HHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV-QTLGT-GMLA 100 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~-~~~~~-~~~a 100 (565)
..++...++-...+.++.|+ +++|.|..+++++.+.+.+...+++++.|+++||+ ||++.....+.+ ..+.. .++.
T Consensus 12 ~~~~~~~~~~~~~p~l~~~l-~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~~~~~~ 89 (382)
T TIGR00902 12 GFFGYFCAYGIFLPFFPAWL-KGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFAAAFSA 89 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 34445444444556777777 57899999999999999999999999999999999 885433222211 11111 1222
Q ss_pred HHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH
Q 008450 101 MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI 180 (565)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (565)
.++ +++.+++.|++++.+.+...|...++..+. .++ |++.++......
T Consensus 90 ~~~------------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~~~~ 137 (382)
T TIGR00902 90 GAH------------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVRLIG 137 (382)
T ss_pred hhh------------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHHHHH
Confidence 331 378899999999999999888888886553 234 899999999999
Q ss_pred HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcc
Q 008450 181 SLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGML 260 (565)
Q Consensus 181 ~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (565)
++|.++||.+++++.+.+|||..|++..+..++.+ +.+...++. +|++++.++ .
T Consensus 138 slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~------------------~---- 191 (382)
T TIGR00902 138 SAAFIIGSALFGGLIGMFDEQNILAILTAGLAFML-IGFLIKPTI---PPKDAIPED------------------E---- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH-HHHHcCCCC---CCCcccccc------------------c----
Confidence 99999999999999999999999987655433222 222222211 111000000 0
Q ss_pred ccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhh
Q 008450 261 YEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQ 340 (565)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (565)
..+..++ .+..++++........+.....+...+. ..+.+...
T Consensus 192 -----------~~~~~~~-------------------------~~~l~~~~~~~~l~~~~l~~~~~~~~~~-~~~~~l~~ 234 (382)
T TIGR00902 192 -----------SQGDSAF-------------------------IALLKNPMNLRFLAAVCLIQGAHAAYYG-FSAIYWQA 234 (382)
T ss_pred -----------cccchhH-------------------------HHHHcChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 0000000 0011222222222112222222222222 11122221
Q ss_pred hhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008450 341 ATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSV 420 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~ 420 (565)
.+.+ ....+.+..+..+..++...+.+++.+|+ +..+.+.++.++..+....+.+.
T Consensus 235 -~g~s------~~~~g~l~~~~~~~~i~~~~~~~~l~~r~----------g~~~~l~~~~~~~~~~~~~~~~~------- 290 (382)
T TIGR00902 235 -AGIS------ASATGLLWGIGVLAEIIIFAFSNKLFQNC----------SARDLLLISAIACVGRWAIIGAI------- 290 (382)
T ss_pred -CCCC------HhHHHHHHHHHHHHHHHHHHHhHHHHhhC----------CHHHHHHHHHHHHHHHHHHHHhH-------
Confidence 1111 11122333344455555555555553333 33455788888888888777653
Q ss_pred hhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHH-HHHHHHHHhhHHhhhhhhccc
Q 008450 421 ARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLT-TLSLGFFVSSFLVAVVKKVTG 499 (565)
Q Consensus 421 ~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~-~~~lg~~ig~~l~~~l~~~~~ 499 (565)
.+++.+++..++.++..+...+....++.+. |++.|++++++++. ...+|..+++.++|.+.+..+
T Consensus 291 ------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 291 ------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred ------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3456677788999999999999999999988 99999999999874 567999999999998864221
Q ss_pred CCCCCCccccccccchhhHHHHHHHHHHHHHHHH
Q 008450 500 SKGGGGWLADNINRGRLDLFYGLLAILSIINLVI 533 (565)
Q Consensus 500 ~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~ 533 (565)
...|++.++++++++++
T Consensus 358 -----------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 358 -----------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred -----------------HHHHHHHHHHHHHHHHH
Confidence 24577777777766544
No 66
>PRK15075 citrate-proton symporter; Provisional
Probab=99.88 E-value=2.1e-20 Score=200.89 Aligned_cols=157 Identities=14% Similarity=0.063 Sum_probs=122.1
Q ss_pred HhHHHHHHHHHHhhhcCCCCchhhhhHH-HHH-----HHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 30 STMGIAVNLVTYLVGTMHLPSATSANIV-TDF-----MGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~-~~~-----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
..........+.+.++++.+..+.+++. +.. .+...+++++.|+++||+ |||++++.+.+++.++++++++++
T Consensus 29 ~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~~~l~~~~~ 107 (434)
T PRK15075 29 FDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVTLSIMASGTLLIAFVP 107 (434)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHHHHHHHHHHHHHHhCC
Confidence 3344566777888999999888765543 222 222246789999999999 999999999999999999999884
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
+... ........++++|+++|++.|...+....+++|++|+++ |+++.++.....++|
T Consensus 108 ~~~~----------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~~~~~~~~~~~g 165 (434)
T PRK15075 108 GYAT----------------IGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGFYTSWQSASQQVA 165 (434)
T ss_pred cHHH----------------HHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chHHHHHHHHHHHHH
Confidence 3211 000012357899999999999999999999999999999 999999999888888
Q ss_pred HHHHHHHHHHhc--------ccccchhhHHHHHH
Q 008450 184 TLMAVTVLVYIQ--------DEISRSVGYGICSV 209 (565)
Q Consensus 184 ~~lg~~i~g~l~--------~~~gw~~~f~i~~~ 209 (565)
..+|+.+++.+. +.+|||++|++..+
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 166 VVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 888888877652 46899999987543
No 67
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.88 E-value=7.8e-20 Score=193.53 Aligned_cols=152 Identities=13% Similarity=0.105 Sum_probs=134.1
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
...+.+.+++|.+..+.++..+.+.++..++.++.|+++||+ |||+++.++.++..++..++..+++
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~~~~~------------ 90 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCSLAET------------ 90 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHHHhCc------------
Confidence 345556788999999999999999999999999999999999 9999999999999999888887632
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
...++++|+++|++.+...+...+++.|.+|+++ |+++.++.+...++|..++|.+++++.+
T Consensus 91 ------------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~i~~~~~~~i~~~l~~ 152 (392)
T PRK10473 91 ------------SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITCIIPVLAPVLGHLIML 152 (392)
T ss_pred ------------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6678899999999999999999999999999988 9999999999999999999999999888
Q ss_pred cccchhhHHHHHHHHHHHHHHHH
Q 008450 197 EISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 197 ~~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
..+|++.|++.+++.++..++..
T Consensus 153 ~~g~~~~~~~~~~~~~i~~~~~~ 175 (392)
T PRK10473 153 KFPWQSLFYTMAAMGILVLLLSL 175 (392)
T ss_pred CcChHHHHHHHHHHHHHHHHHHH
Confidence 89999999988776655544433
No 68
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.88 E-value=2.1e-20 Score=201.19 Aligned_cols=157 Identities=8% Similarity=0.010 Sum_probs=130.4
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
...+++++ +|++..+.+++.+.+.++..++.++.|+++||+ |||+++.++.++..++.+++++..+..
T Consensus 48 ~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 115 (438)
T TIGR00712 48 LAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWAT---------- 115 (438)
T ss_pred hhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhcccccc----------
Confidence 34566665 599999999999999999999999999999999 999999999999998888876652111
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH-hc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY-IQ 195 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~-l~ 195 (565)
.+...+.+.|++.|++.|...+.....+.|++|+++ |++++++++...++|..+++.+.+. +.
T Consensus 116 ----------~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~ 179 (438)
T TIGR00712 116 ----------SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMA 179 (438)
T ss_pred ----------chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHH
Confidence 136678889999999999999999999999999999 9999999999999999998877765 44
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 196 DEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 196 ~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
...+||+.|++.+++.++..+..++.
T Consensus 180 ~~~~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 180 WFNDWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999887766654444443
No 69
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.88 E-value=6.9e-20 Score=199.66 Aligned_cols=351 Identities=14% Similarity=0.156 Sum_probs=235.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.++.++++.+.-..-++-++. ++.-|+...+++..+..+..++..+++|.++||+ .|||+++.+-++..+..+..++.
T Consensus 18 a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~~~~L~~l 95 (524)
T PF05977_consen 18 AQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALVALLLAVL 95 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHHHHHHHHH
Confidence 677777776655555555544 5677889999999999999999999999999999 99999999998887766665554
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
..... .+.+.+++.-++.|++.+...|+.++++.|..|+++ ..++.++.....|+
T Consensus 96 ~~~~~-------------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~~ni 150 (524)
T PF05977_consen 96 AFFGL-------------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSISFNI 150 (524)
T ss_pred HHhCc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHHHHH
Confidence 22121 357889999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
..++||.++|.+....|-.++|.+.++..++++..+...+++. +++..+.+...+.+...++
T Consensus 151 ar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~---~~~~~~~e~~~~~l~~G~r--------------- 212 (524)
T PF05977_consen 151 ARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPP---PPSSLPRERFFSALREGLR--------------- 212 (524)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc---cccccchhhhhhhHHHHHH---------------
Confidence 9999999999999889999999998887776655544443321 1111111111111111110
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
.+...+.+...+.......++...+..+...+..+..
T Consensus 213 -------------------------------------------yv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l 249 (524)
T PF05977_consen 213 -------------------------------------------YVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVL 249 (524)
T ss_pred -------------------------------------------HHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHh
Confidence 0011111111111111111111111111222322221
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
+.+ ....+.+.....++.++.+.+..++ .+| .+..+.+..+.++.+++++.+++.
T Consensus 250 ~~~------a~~yGll~a~~gvGai~Gal~~~~l----~~~------~~~~~lv~~~~~~~a~~~~~lal~--------- 304 (524)
T PF05977_consen 250 GGG------ASGYGLLLAAFGVGAILGALLLPRL----RRR------LSSRRLVLLASLLFALALLLLALS--------- 304 (524)
T ss_pred CCc------HHHHHHHHHHHHHHHHHHHHHHHHh----hcc------cCcchhhHHHHHHHHHHHHHHhcc---------
Confidence 111 1112333344444444444443333 222 233344666777777777666552
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
.+.+..++.+++.|++.....+..++.+.+.+|+++||+..+++++....+..+|+.+.|.+.+
T Consensus 305 ----------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~ 368 (524)
T PF05977_consen 305 ----------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD 368 (524)
T ss_pred ----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667788899999999999999999999999999999999999999999999999998864
No 70
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.2e-19 Score=192.94 Aligned_cols=399 Identities=14% Similarity=0.082 Sum_probs=244.6
Q ss_pred hhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHH
Q 008450 53 SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVL 132 (565)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (565)
.+.+++++.++.++++.++|+++||+ |||..+.++.++..++.+++.++...+. +.++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~~~---------------------~e~l 119 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSAPS---------------------FEML 119 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHH
Confidence 46778899999999999999999999 9999999999999999998888865555 8899
Q ss_pred HHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH--HhcccccchhhHHHHHHH
Q 008450 133 YIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV--YIQDEISRSVGYGICSVA 210 (565)
Q Consensus 133 ~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g--~l~~~~gw~~~f~i~~~~ 210 (565)
.++|++.|+..|......+-++.|..|.+. ||........+.++|..+|..++. .+.....|.+.+.+..+.
T Consensus 120 i~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~ 193 (485)
T KOG0569|consen 120 ILGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIP 193 (485)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHH
Confidence 999999999999999999999999999999 999999999999999999966653 445666799999888877
Q ss_pred HHHHHHHHHhcc--cccccc-CCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhc
Q 008450 211 MFMAIIIFLAGT--KRYRYK-KSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAE 287 (565)
Q Consensus 211 ~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (565)
.++.++...+.+ |++-.. +.+.++.++..+ ....+ + +. .++.+. .....+.
T Consensus 194 ~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~---~y~G~---~---~~--------------~~~~e~---~~~e~~~ 247 (485)
T KOG0569|consen 194 ALLQLALLPFLPESPKYLLIKKGDEEEARKALK---FYRGK---E---DV--------------EAEIEE---MLREIEE 247 (485)
T ss_pred HHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHH---HHhCC---C---cc--------------hhHHHH---HHHHHHH
Confidence 776666655543 333222 222122221111 11100 0 00 000000 0000000
Q ss_pred CCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHH
Q 008450 288 GDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAIL 367 (565)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 367 (565)
....+.+..+.+..++.+ ..|+.....+.+...+...........+........+... ...+.+....+..+
T Consensus 248 ~~~~~~~~~sl~~~~~~~--~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~------~a~~an~~~g~v~~ 319 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNP--TLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPE------EAQYANLGIGIVNL 319 (485)
T ss_pred hccccccCCcHHHHhcCc--chhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHH------HHHHHHHHHHHHHH
Confidence 000000001111111111 1122222222221221111111111111111111111111 12233444444445
Q ss_pred HHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHH
Q 008450 368 ITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGA 447 (565)
Q Consensus 368 i~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~ 447 (565)
+.......++|+++|| ..+.++..++.+...++.......+... +.-.+..+.+.++..+
T Consensus 320 ~~t~~~~~lid~~gRR----------pLll~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 320 LSTLVSPFLIDRLGRR----------PLLLISLSLMAVALLLMSIALFLSNSFG----------SWLSYLCIAAIFLFII 379 (485)
T ss_pred HHHHHHHHHHHhcCCc----------HHHHHHHHHHHHHHHHHHHHHHHHHHhh----------hHHHHHHHHHHHHHHH
Confidence 5555555666666766 2366677777776666655433221110 0111223444444444
Q ss_pred HHHH-hhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHH
Q 008450 448 GEAF-IYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAIL 526 (565)
Q Consensus 448 g~~~-~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l 526 (565)
+..+ ..|..+-+.+|++|++.|..++++..+++++..++-....+.+.+..+ ..+|..+++.
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----------------~~~filF~i~ 442 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----------------PYVFILFVIP 442 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chhhHHHHHH
Confidence 4443 479999999999999999999999999999999999998888865432 2568889999
Q ss_pred HHHHHHHHhhhhhhcCCCCCccch
Q 008450 527 SIINLVIYLICAVWYKPKKPKAGI 550 (565)
Q Consensus 527 ~lv~~~~~~~~~~~~~~~~~~~~~ 550 (565)
+++..+..+...||+|+|+..|..
T Consensus 443 ~~~~~i~~~~~lPETkgr~~~eI~ 466 (485)
T KOG0569|consen 443 LAIFLIYLYRYLPETKGRTPYEII 466 (485)
T ss_pred HHHHHHHHHHhCcccCCCCHHHHH
Confidence 999999999999999999876654
No 71
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.87 E-value=7.1e-20 Score=219.54 Aligned_cols=337 Identities=11% Similarity=0.024 Sum_probs=198.3
Q ss_pred hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHH--HHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchh
Q 008450 51 ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV--QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQ 128 (565)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~--~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (565)
...++..+++.+.+.++.+++|+++||+ |||+++...... ......+.++. .+ +
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~--~~---------------------s 107 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH--LN---------------------S 107 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH--Hh---------------------h
Confidence 4567888899999999999999999999 999986442222 22221222221 01 3
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Q 008450 129 MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICS 208 (565)
Q Consensus 129 ~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~ 208 (565)
++.++++|+++|++.+...|+..+++.|++|+++ |++++++..++.++|.++||+++|++.+..+|++.|.+.+
T Consensus 108 ~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~ 181 (1140)
T PRK06814 108 VPLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLM 181 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHH
Confidence 7889999999999999999999999999999998 9999999999999999999999999999999999995554
Q ss_pred HHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcC
Q 008450 209 VAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEG 288 (565)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (565)
++.++++++.+...+ .+..++.........+.....+
T Consensus 182 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 218 (1140)
T PRK06814 182 GIAVLGWLASLFIPK-TGNAAPDLKIDRNIIRSTITLL------------------------------------------ 218 (1140)
T ss_pred HHHHHHHHHHhhCCC-CCCCCCCCeeccchHHHHHHHH------------------------------------------
Confidence 444444433333222 1111110000000000000000
Q ss_pred CCCCCCCCCCCccccchhhHhHhHHHh-HHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHH
Q 008450 289 DFEAGSTPNPWKLCSVTSVEEVKMVAR-LLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAIL 367 (565)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 367 (565)
......+.+.. .+..............+++ .+..+....+ ....+.+.....+..+
T Consensus 219 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~g~~------~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 219 ----------------KYAKADKRIWLAILGISWFWLVGAVVLSQLP-LLAKETLGGD------ENVATLFLAVFSVGVA 275 (1140)
T ss_pred ----------------HHHhcCchHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHcCCc------hHHHHHHHHHHHHHHH
Confidence 00011111111 1111111111111112222 2222211111 1123344555566666
Q ss_pred HHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC---CCCCcceeehhhHHHHHH
Q 008450 368 ITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGL---TTATLPVSVFLLIPQFFL 444 (565)
Q Consensus 368 i~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~li~~~~l 444 (565)
+...+.+++.++..++ +.+..+.++.++..+.+.+..... ......+ ---....+.+.+++..++
T Consensus 276 ig~~~~g~l~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (1140)
T PRK06814 276 VGSFLASKLSEGRITL----------LYVPIGALLMGLFGLDLAFASSSV--PAEPAQLKSILVFLSKRHGWRILIDLFG 343 (1140)
T ss_pred HHHHHHHHHhCCceee----------eeehHHHHHHHHHHHHHHhccccc--ccccccccchhhhhcccccHHHHHHHHH
Confidence 6667666664432222 112333333333333222210000 0000000 000001344566678888
Q ss_pred HHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 445 VGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 445 ~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
.|++.++..+..++++.+.+|++.||+++|+.++...++..+++.+.+.+.
T Consensus 344 ~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 344 LAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999988875
No 72
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.87 E-value=5e-22 Score=209.27 Aligned_cols=366 Identities=35% Similarity=0.564 Sum_probs=239.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCC
Q 008450 82 YKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEK 161 (565)
Q Consensus 82 r~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~ 161 (565)
.|++.++.+++.+|.+++.+++. |.. .++..+.+.++++.++.++|+|+.+|+..++++|+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~-~~~--------------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~ 65 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAI-PPS--------------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED 65 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHT-SSS--------------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHh-cch--------------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc
Confidence 37899999999999999888754 321 123446788999999999999999999999999999987
Q ss_pred ChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcccccccc-CCCCCchHH-HH
Q 008450 162 DEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYK-KSSGSPIVH-IF 239 (565)
Q Consensus 162 ~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 239 (565)
++ .+|.++++++|+++|+|..+++.+.+++.+++||.+.|.++++..+++++.++..+++++++ +|.+.+..+ ..
T Consensus 66 ~~---~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~ 142 (372)
T PF00854_consen 66 DD---SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIK 142 (372)
T ss_dssp TT---THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SH
T ss_pred ch---hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHH
Confidence 41 23889999999999999999999999999999999999999999999999999988888776 566666555 44
Q ss_pred HHHHHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCcc-ccchhhHhHhHHHhHHH
Q 008450 240 QVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKL-CSVTSVEEVKMVARLLP 318 (565)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 318 (565)
.++....+++....+....+..................... ........ ...|.. ++.++++..+.+.+.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~~~~k~~~~~~~ 215 (372)
T PF00854_consen 143 LVLVAAFKKRKLAVPKGSSWLDWALFQYSERSIFGIIVFIR-AAVIFFPE------IFFWALFCQVQRVEELKALIRFLP 215 (372)
T ss_dssp HHHHHHHHHHCCCH-HHHHHHHHHHHHHCCCCCCCCCCHHH-HHHHHCCC------HHHHTTTSSTTTHHHCCHHHCHHH
T ss_pred HHHHHHHHHhhcccccchHHHHHhhhhhhhhhhhhhhhhcc-chhhhhhh------hhhcccCCccceeeeeeeeeeccc
Confidence 55555555544443322211111000000000000001111 11111110 000100 12345566777777778
Q ss_pred HHHHHHHHHhhhcccchhhhhhhhcccccccc-cccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHH
Q 008450 319 IWATTIIFWTTYAQMITFSVEQATTMERSIGR-FQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMA 397 (565)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~ 397 (565)
.+...+.+.+...+.......+...++....+ +.+|+.+++.++.+..++..|+.++++.|+.++ .+ ..+...++.
T Consensus 216 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~--~~~~~~k~~ 292 (372)
T PF00854_consen 216 IFLFWIFYWQMYSQLNTFFLLQVPQMDRGIGGLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-GI--QPSPPQKFG 292 (372)
T ss_dssp CCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT---------HHHHH
T ss_pred cCeEEEEeeehhhhhhhHHHHhccccccccccccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-cc--cchhhhhhh
Confidence 88888888888888877777777777766777 899999999999999999999999999999883 22 578888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHH
Q 008450 398 IGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL 477 (565)
Q Consensus 398 ~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~ 477 (565)
+|++++.+++.+....+..+....+.++ ..+..|.+..++++.++|.+..+...+...|.+|++..+..+|+++
T Consensus 293 ~G~~~~~~~~~~~~~v~~~r~~~~~~~~------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~~~ 366 (372)
T PF00854_consen 293 IGMVFAILAMFVAAIVEIRRLCYAQPCG------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGIWF 366 (372)
T ss_dssp HH-HHHHHHHHTTTHHHH---HH----T------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcccccC------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHHHH
Confidence 9999999999988877664443333222 4555777899999999999999999998888888877777777776
Q ss_pred HHHH
Q 008450 478 TTLS 481 (565)
Q Consensus 478 ~~~~ 481 (565)
....
T Consensus 367 ~~~~ 370 (372)
T PF00854_consen 367 ALSA 370 (372)
T ss_dssp HHH-
T ss_pred HHhc
Confidence 5543
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.87 E-value=1.1e-19 Score=218.03 Aligned_cols=354 Identities=12% Similarity=0.077 Sum_probs=217.2
Q ss_pred hhHHHHHHHhHHHHHHHHHHhhhcCCCCc--hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHH
Q 008450 22 GIELCERLSTMGIAVNLVTYLVGTMHLPS--ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 99 (565)
Q Consensus 22 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 99 (565)
..+++..+...+....+.+++..+++.+. ...+++.+++.++..++.+++|+++||+ |||++++++.++.+++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~~~~~~~~ 94 (1146)
T PRK08633 16 LTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFEVGLTLLI 94 (1146)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHHHHHHHHH
Confidence 35666666655666666677766666654 4468999999999999999999999999 99999999988777766665
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
.+....+ +++.++++|+++|++.+...++..+++.|++|+++ |++++++...+
T Consensus 95 ~~~~~~~---------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~ 147 (1146)
T PRK08633 95 VLAYYLG---------------------WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLLEAF 147 (1146)
T ss_pred HHHHHHc---------------------cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHHHHH
Confidence 5442212 37889999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHHHhccc--------c-cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcc
Q 008450 180 ISLGTLMAVTVLVYIQDE--------I-SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 250 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~~--------~-gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (565)
.++|.++|+.+++++.+. + +|.+.+.+..+...+..++..+..++.+...+.......
T Consensus 148 ~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 214 (1146)
T PRK08633 148 TIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK------------- 214 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc-------------
Confidence 999999999999998775 2 344444333332222222222222221111000000000
Q ss_pred ccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhH-HHHHHHHHHHHhh
Q 008450 251 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARL-LPIWATTIIFWTT 329 (565)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 329 (565)
........+.. ..+...+.+... +............
T Consensus 215 ---------------------~~~~~~~~~~~----------------------~~l~~~~~~~~~~~~~~~~~~~~~~~ 251 (1146)
T PRK08633 215 ---------------------YLFPKLLWRNL----------------------KLLRSDRVLWLAIIGLSYFWFISQLA 251 (1146)
T ss_pred ---------------------cccHHHHHHHH----------------------HHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 000011111111 1111111111111
Q ss_pred hcccchhhhhhhhccccccccccc-CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHH
Q 008450 330 YAQMITFSVEQATTMERSIGRFQI-PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMA 408 (565)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~ 408 (565)
...++ .+.......+ .. ..+++.....+..++...+.+++.++..++ ..+.++.++.+++++
T Consensus 252 ~~~~~-~~~~~~~g~s------~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~----------~~~~~~~~~~~~~~~ 314 (1146)
T PRK08633 252 QANFP-AYAKEVLGLD------NTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL----------GLVPLGALGLALSLF 314 (1146)
T ss_pred HHhhH-HHHHHHhCCC------cHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc----------cchhHHHHHHHHHHH
Confidence 11111 1211111111 11 123344445555556666666665443332 224556666666655
Q ss_pred HHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhh
Q 008450 409 AAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSS 488 (565)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~ 488 (565)
.+.+. .+.+++++..++.+++.++..+..++++.+.+|++.||+++|+.++...+|..+++
T Consensus 315 ~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 315 LLPTA-------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred HHHHh-------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHH
Confidence 55432 24455667788889999888889999999999999999999999999999998887
Q ss_pred HHhhhhh
Q 008450 489 FLVAVVK 495 (565)
Q Consensus 489 ~l~~~l~ 495 (565)
.+.+.+.
T Consensus 376 ~~~~~l~ 382 (1146)
T PRK08633 376 ALTTLFS 382 (1146)
T ss_pred HHHHHHH
Confidence 7776553
No 74
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.87 E-value=1.5e-21 Score=201.06 Aligned_cols=151 Identities=14% Similarity=0.185 Sum_probs=139.2
Q ss_pred hhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccc
Q 008450 42 LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTC 121 (565)
Q Consensus 42 l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 121 (565)
++..+|.+++..|++.+.+.+...+..|+.|+|+||+ .||+++.+|..++.++.++++++.
T Consensus 59 v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW~~Av~~~~fs~------------------ 119 (493)
T KOG1330|consen 59 VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIWTLAVFASGFSN------------------ 119 (493)
T ss_pred HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHHHHHHHHHHHHH------------------
Confidence 3446899999999999999999999999999999999 999999999999999999999983
Q ss_pred cCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccccc-c
Q 008450 122 EQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS-R 200 (565)
Q Consensus 122 ~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~g-w 200 (565)
.++++.++|.+.|+|.+.+.|.++++++|.+|+.+ |++.++++|+.+++|..+|.+++.++....+ |
T Consensus 120 ------~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~W 187 (493)
T KOG1330|consen 120 ------HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWW 187 (493)
T ss_pred ------HHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHHHhhhhcccccceeEEeeeeeccCccce
Confidence 49999999999999999999999999999999999 9999999999999999999999999988777 9
Q ss_pred hhhHHHHHHHHHHHHHHHHhccc
Q 008450 201 SVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 201 ~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
||.|+..+++.+++.++.++..+
T Consensus 188 r~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 188 RWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred EEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999888777666555443
No 75
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.86 E-value=1.2e-19 Score=193.70 Aligned_cols=377 Identities=13% Similarity=0.023 Sum_probs=233.0
Q ss_pred hHHHHHHHhHHHHHHHHHHhhh-cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~ 101 (565)
..+.-.+..+.+.+.+.+.+.+ ++|+|..|.+++.+++.++..+++++.|++.||+ |.|+++.++.++..+.+++.++
T Consensus 41 ~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i~~~~~~~ 119 (462)
T PRK15034 41 SCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILIIPCVWLGI 119 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHH
Confidence 4455555666666777777765 8999999999999999999999999999999999 9999999999999999988887
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
+..-+ ..+++.+++.|++.|++ |+..+.....+++++|+++ ||+++++.....|
T Consensus 120 a~~~~-------------------~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~g~G~ 173 (462)
T PRK15034 120 AVQNP-------------------NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGINGGLGN 173 (462)
T ss_pred HHccc-------------------CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHHHHHh
Confidence 51100 02488899999999998 7788999999999999999 9999999976667
Q ss_pred HHHHHHHHHHHHhc-----c-------------cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHH
Q 008450 182 LGTLMAVTVLVYIQ-----D-------------EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIV 243 (565)
Q Consensus 182 lg~~lg~~i~g~l~-----~-------------~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (565)
+|..+++.+...+. . ..+||.++++..+..+++.++.++..+..+ +++...++..
T Consensus 174 ~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~---~~~~~~~~~~---- 246 (462)
T PRK15034 174 LGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA---SSRASIADQL---- 246 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc---ccccCHHHHH----
Confidence 77766555444322 1 334777776666665555555554432211 1111111110
Q ss_pred HHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHH
Q 008450 244 AAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATT 323 (565)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (565)
..+ ++++.....+..+...
T Consensus 247 ~vl-------------------------------------------------------------k~~~~Wllslly~~tF 265 (462)
T PRK15034 247 PVL-------------------------------------------------------------QRLHLWLLSLLYLATF 265 (462)
T ss_pred HHh-------------------------------------------------------------CCCchhHHHHHHHHHH
Confidence 011 1111111111111111
Q ss_pred HHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHH
Q 008450 324 IIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLS 403 (565)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~ 403 (565)
..+......++.+...+ .+ .........+..+...+..|+.+++.||+.++ +.+.++.+.+
T Consensus 266 G~fvg~s~~lp~~~~~~---~~------~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~----------~vl~~~~i~~ 326 (462)
T PRK15034 266 GSFIGFSAGFAMLAKTQ---FP------DVNILRLAFFGPFIGAIARSVGGAISDKFGGV----------RVTLINFIFM 326 (462)
T ss_pred HHHHHHHHHHHHHHHHH---cC------hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCch----------HHHHHHHHHH
Confidence 12211211222221111 11 00111112233455667778888888876665 2245555555
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-----------------
Q 008450 404 IVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK----------------- 466 (565)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~----------------- 466 (565)
.++.......... +...+.+.....++...++.++.+...+.++.+.+|+
T Consensus 327 ~i~~~~~~l~lp~-------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 327 AIFSALLFLTLPG-------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred HHHHHHHHHHhcc-------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 5544332222110 0012333444444555555566666666677667764
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 467 ----GMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 467 ----~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
+..|.++|+......+|+++-|.+.+.....+ +.+...|+.+.+..+++.++.|.++.|+
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~---------------g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 394 REAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMT---------------GSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHc---------------CCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 25778888888888999999898877765332 1245668899999999999988887664
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.86 E-value=2.9e-19 Score=188.79 Aligned_cols=337 Identities=10% Similarity=0.015 Sum_probs=204.9
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchh----HHHHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYK----TIAIFAAVQTLGTGML 99 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~----~~~~~~~~~~~~~~~~ 99 (565)
.++..+++..+.+.++.|++ ++|.|..++|++.+++.+...++.+++|+++||+ ||++ .+.++..+. .....
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~~~~~ 88 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--AVAFW 88 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--HHHHH
Confidence 45555555566677888885 6899999999999999999999999999999999 9843 222221111 11111
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
... .+.+.+++.|++.|++.+...|...++..|+ .++ |+++++..+..
T Consensus 89 ~~~------------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~ 136 (382)
T PRK11128 89 FGA------------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLW 136 (382)
T ss_pred Hhc------------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHH
Confidence 111 1378888999999999999999888888776 334 78889999999
Q ss_pred HHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCc
Q 008450 180 ISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGM 259 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (565)
.++|.++||.+++++.+++|||..|++.++..++..+.. +..++ ++|++++.++ .
T Consensus 137 ~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~-----------------~---- 191 (382)
T PRK11128 137 GSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQ-LLRPT---IMPQGESRQQ-----------------E---- 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHH-HccCC---CCCccccccc-----------------c----
Confidence 999999999999999999999999988775544433322 22221 1111100000 0
Q ss_pred cccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhh
Q 008450 260 LYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVE 339 (565)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (565)
.....++ .+..++++........+.....+....... ..+..
T Consensus 192 ------------~~~~~~~-------------------------~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~ 233 (382)
T PRK11128 192 ------------SAGWPAW-------------------------KALLKEPTVWRFLLCVSLLQGSHAAYYGFS-AIYWQ 233 (382)
T ss_pred ------------ccccchH-------------------------HHHHcChhHHHHHHHHHHHHHHhHhHHHHH-HHHHH
Confidence 0000000 000112222211111122222211111111 12221
Q ss_pred hhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008450 340 QATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLS 419 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~ 419 (565)
+ .+.+ ....+.+..+..+..++...+.+++.+|.. ..+.+..+.++..+++..+...
T Consensus 234 ~-~g~s------~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~----------~~~~l~~~~~~~~~~~~~~~~~------ 290 (382)
T PRK11128 234 A-AGYS------ASTIGYLWSLGVVAEVLIFAFSNRLFRRWS----------ARDLLLLSAICGVVRWGLMGST------ 290 (382)
T ss_pred H-CCCC------HhHHHHHHHHHHHHHHHHHHHHHHHHHHCC----------HHHHHHHHHHHHHHHHHHHHhh------
Confidence 1 1111 111223333444444444455555543332 3344667777777776655442
Q ss_pred hhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHH-HHHHHHHHHhhHHhhhhhh
Q 008450 420 VARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 420 ~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~-~~~~lg~~ig~~l~~~l~~ 496 (565)
.+++.+++..++.+++++...+....+..+. |++.+++..++.+ ....+|..+|+.+.|.+.+
T Consensus 291 -------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~ 354 (382)
T PRK11128 291 -------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ 354 (382)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2455567788889999999899999988887 5555789999887 5457788999999998864
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.86 E-value=3e-19 Score=189.49 Aligned_cols=383 Identities=9% Similarity=0.041 Sum_probs=228.5
Q ss_pred hhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH
Q 008450 22 GIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 22 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~ 101 (565)
..+++...++....+.++.|+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+.++.+.....++......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~ 87 (396)
T TIGR00882 9 LFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLVLFAPFFI 87 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHH
Confidence 356677777777888999999999999999999999999999999999999999999 9999998877766554433221
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
....+.. .......+.+++++.|++.+...+....+..|.. ++ ++..++......+
T Consensus 88 ~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~------~~~~~g~~~~~~~ 143 (396)
T TIGR00882 88 YVFGPLL----------------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RN------SNFEYGKARMFGC 143 (396)
T ss_pred HHhhhHH----------------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hh------cccccchhhhhcc
Confidence 1000100 0001334567788889998888888877776642 22 4456777888889
Q ss_pred HHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccc
Q 008450 182 LGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (565)
+|.++||.++|.+.+ .+|+.+|++.+++.++..++.+...++ +|++++..+ ..+ ...
T Consensus 144 ~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------------~~~-~~~----- 200 (396)
T TIGR00882 144 VGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPK----APSSATVAN------------ALG-ANA----- 200 (396)
T ss_pred cHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCC----Cchhhhhhc------------ccc-ccc-----
Confidence 999999999998865 699999998877766554444332221 111000000 000 000
Q ss_pred cCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhh
Q 008450 262 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQA 341 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (565)
..++.+ +.. +..++++........+.....+.....+. ..+....
T Consensus 201 ----------~~~~~~--~~~----------------------~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~y~~~~ 245 (396)
T TIGR00882 201 ----------SAFSLK--LAL----------------------ELFRQRKFWMFVLYVVGVACVYDVFDQQF-ANFFTSF 245 (396)
T ss_pred ----------CCCCHH--HHH----------------------HHHcCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHHHh
Confidence 000000 000 00112221111111111111111111111 1221111
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~ 421 (565)
.... +......+....+..+...+.....+++.|++.+| +.+.++.++.++++.....
T Consensus 246 --~~~~-~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~----------~~l~~~~~l~~l~~~~~~~--------- 303 (396)
T TIGR00882 246 --FATP-QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK----------NALLIAGTIMSVRIIGSSF--------- 303 (396)
T ss_pred --cccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----------hhHHHHHHHHHHHHHHHHh---------
Confidence 1100 00000112334444455555556666665555544 2256666666666655433
Q ss_pred hhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHH-HHHHHHHHHHHhhHHhhhhhhcccC
Q 008450 422 RAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL-FLTTLSLGFFVSSFLVAVVKKVTGS 500 (565)
Q Consensus 422 ~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~lg~~ig~~l~~~l~~~~~~ 500 (565)
..+.+++.+..++.+++..........+..+..|++.+++..+. ++....+|+.+++.+.+.+.+..
T Consensus 304 ----------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-- 371 (396)
T TIGR00882 304 ----------ATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-- 371 (396)
T ss_pred ----------cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc--
Confidence 23455566677888888777766777788888899999887776 67888999999999999886421
Q ss_pred CCCCCccccccccchhhHHHHHHHHHHHHHHHHHh
Q 008450 501 KGGGGWLADNINRGRLDLFYGLLAILSIINLVIYL 535 (565)
Q Consensus 501 ~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~ 535 (565)
++...|.+.+++.++..++..
T Consensus 372 --------------G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 372 --------------GFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHHH
Confidence 145677777777777666543
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.86 E-value=1.2e-19 Score=194.53 Aligned_cols=356 Identities=13% Similarity=0.105 Sum_probs=222.6
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc---ccchh-HHHHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYK-TIAIFAAVQTLGTGML 99 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~~~ 99 (565)
++..+..+..+..++++|+++++|+++.++|++.+...+...+..|+.|+++||. +|||| .++++....+++.+++
T Consensus 8 ~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~ 87 (437)
T TIGR00792 8 DFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLL 87 (437)
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHH
Confidence 4555666667778899999999999999999999999999999999999999983 27754 5667778888887777
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
.+..+.+ .......+++.+++.+++.+.......++..|..++.++ |+++.++....
T Consensus 88 ~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----R~~~~~~~~~~ 144 (437)
T TIGR00792 88 FTTPDFS------------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE-----RESLSTFRRFG 144 (437)
T ss_pred HhCCCCC------------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH-----HHHHHHHHHHH
Confidence 6652111 112356677788888999988888888899988754332 88888888888
Q ss_pred HHHHHHHHHHHHHHhc-------ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcccc
Q 008450 180 ISLGTLMAVTVLVYIQ-------DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 252 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~-------~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
.++|.+++..+.+.+. +..+|++.+.+.+++.++..++.+...++.++++++.++
T Consensus 145 ~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~------------------ 206 (437)
T TIGR00792 145 ATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE------------------ 206 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc------------------
Confidence 8888777766655443 246899999888777665554444433321111010000
Q ss_pred CCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcc
Q 008450 253 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 332 (565)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (565)
++.+..+.. +.....|.+...................
T Consensus 207 ---------------------~~~~~~~~~----------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (437)
T TIGR00792 207 ---------------------KKLSLKQIF----------------------KALFKNDQLLILCLAYLFYNLAFNIKNG 243 (437)
T ss_pred ---------------------cCCCHHHHH----------------------HHHhCCHHHHHHHHHHHHHHHHHHHHcc
Confidence 000000000 0011112222111111111111111111
Q ss_pred cchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008450 333 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 412 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~ 412 (565)
....+... ..+ .....+.+..+..+..++..++.+++.+++.+| +.+..+.++..++++.+.+
T Consensus 244 ~~~~~~~~------~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~----------~~~~~~~~~~~~~~~~~~~ 306 (437)
T TIGR00792 244 VQVYYFTY------VLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK----------ILFAGGILLMVLGYLIFFF 306 (437)
T ss_pred hhheeEee------ecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHH
Confidence 11111111 000 011122334445666667777777776655543 3356677777776665543
Q ss_pred HHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCC-------chhhHHHHHHHHHHHHHHHH
Q 008450 413 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTLSLGFF 485 (565)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~~~~lg~~ 485 (565)
. ..+.+..++..++.+++.+...+..++++.|..| ++.+|++.|++++...+|..
T Consensus 307 ~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~ 368 (437)
T TIGR00792 307 A------------------GSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQA 368 (437)
T ss_pred c------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHH
Confidence 2 1123345566777888888888888999888865 56789999999999999999
Q ss_pred HhhHHhhhhhhcc
Q 008450 486 VSSFLVAVVKKVT 498 (565)
Q Consensus 486 ig~~l~~~l~~~~ 498 (565)
+++.+.+.+.+..
T Consensus 369 lg~~i~g~ll~~~ 381 (437)
T TIGR00792 369 LAGFLVGLILGII 381 (437)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999886543
No 79
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.86 E-value=1e-19 Score=190.94 Aligned_cols=342 Identities=12% Similarity=0.098 Sum_probs=201.6
Q ss_pred HHHHHhhhcCC--CCchhhhhHHHH--H---HHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008450 37 NLVTYLVGTMH--LPSATSANIVTD--F---MGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 109 (565)
Q Consensus 37 ~l~~yl~~~l~--~s~~~~~~~~~~--~---~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~ 109 (565)
...+++.++.. .++++.+.+.+. + .++..+++++.|+++||+ |||+++.++.++..++.++++++.+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~-- 90 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT-- 90 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh--
Confidence 44555555543 445666555543 2 233356889999999999 9999999999999999999988743221
Q ss_pred CCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHH
Q 008450 110 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 189 (565)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~ 189 (565)
........++++|+++|++.+...+..+.++.|++|+++ |++..++......+|.++++.
T Consensus 91 --------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~ 150 (394)
T TIGR00883 91 --------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAAL 150 (394)
T ss_pred --------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHH
Confidence 111223468899999999999999999999999999998 999999999999999999988
Q ss_pred HHHHhc--------ccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccc
Q 008450 190 VLVYIQ--------DEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 190 i~g~l~--------~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (565)
+++.+. +.++||+.|.+.+++.+++.+..... ++ +++.++ . +++ .+ .
T Consensus 151 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~-~----------~~~-~~---~----- 205 (394)
T TIGR00883 151 TVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNL-EE----TPVFEK-A----------QEK-HK---K----- 205 (394)
T ss_pred HHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhc-CC----ChhHHH-H----------Hhc-cc---c-----
Confidence 876653 35789999988776655443332221 11 110000 0 000 00 0
Q ss_pred cCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHh-HHHhHHHHH-HHHHHHHhhhcccchhhhh
Q 008450 262 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVK-MVARLLPIW-ATTIIFWTTYAQMITFSVE 339 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 339 (565)
. +.++ .+..++++ .+....... ......... ....+.+..
T Consensus 206 ------------~---------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 247 (394)
T TIGR00883 206 ------------K---------------------RGPI----RETLTKHRKPFLLGLGLVIATTTTFYLI-TTYLPTYLT 247 (394)
T ss_pred ------------c---------------------cCCH----HHHHHhchHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 0 0000 00011111 121111111 111111111 111112221
Q ss_pred hhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHH-HHHHHHHHHHHHHHHHHHHHh
Q 008450 340 QATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMA-IGLVLSIVGMAAAALVERKRL 418 (565)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~-~G~~l~~~~~~~~~~~~~~~~ 418 (565)
+....+ ....+.......+...+..++.+++.||+.+|. .+. .+.+....++........
T Consensus 248 ~~~g~~------~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~----------~~~~~~~~~~~~~~~~~~~~~~--- 308 (394)
T TIGR00883 248 QTLGLS------ANSALLVLMLSLILFFITIPLSGALSDRIGRRP----------VLIIFTVLAALLAVPLLMALLD--- 308 (394)
T ss_pred HhcCCC------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH----------HHHHHHHHHHHHHHHHHHHHhc---
Confidence 111111 111223344455566666777777766655441 122 222222222222211110
Q ss_pred hhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHH-HHHHHHHHHHHhhHHhhhhhh
Q 008450 419 SVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGL-FLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 419 ~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl-~~~~~~lg~~ig~~l~~~l~~ 496 (565)
..+.+..+...++.+++.....+..++++.|.+|++.|+++.++ +++.+.+|..++|.+.+.+.+
T Consensus 309 -------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 309 -------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 12344455666777888878888899999999999999999998 456667888899999998864
No 80
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=8.2e-20 Score=187.07 Aligned_cols=390 Identities=17% Similarity=0.077 Sum_probs=263.7
Q ss_pred CCCCCCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHH
Q 008450 14 SPADPSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 93 (565)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 93 (565)
+++-+.-+...+.-.++.|.+.+.+.+++.+++|+|+.|.++++..-.+...+.+++-|.+.||| |.|++..++.++..
T Consensus 12 ~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l~~ 90 (417)
T COG2223 12 ARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLLLL 90 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHHHH
Confidence 44444445566777788888999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhccee
Q 008450 94 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 173 (565)
Q Consensus 94 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (565)
+-++..+++.+.|+ .+.+++.+++.|++ |+.+++..++++.++|+++ +|.+.
T Consensus 91 IP~~~~~~a~~~~~---------------------~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~------qG~Al 142 (417)
T COG2223 91 IPCLGLAFAVTYPS---------------------TWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEK------QGLAL 142 (417)
T ss_pred HHHHHHHHHccCCc---------------------hHHHHHHHHHHhcc-cceehcccccccccCChhh------hhHHH
Confidence 99999999865444 57899999999998 5566888999999999999 99999
Q ss_pred ehhhHHHHHHHHHHHHHHHHhccccc---chhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcc
Q 008450 174 SRFFFFISLGTLMAVTVLVYIQDEIS---RSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRK 250 (565)
Q Consensus 174 ~~~~~~~~lg~~lg~~i~g~l~~~~g---w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (565)
+++. ..|+|..+...++.++....+ |+.+..+..+..+++.+..++..+..++++++..+... .
T Consensus 143 GI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~--~---------- 209 (417)
T COG2223 143 GIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP--A---------- 209 (417)
T ss_pred HHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch--h----------
Confidence 9999 889999999999999888888 99999888887777666666655443332222111110 0
Q ss_pred ccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHH-HHHHHHHhh
Q 008450 251 MDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIW-ATTIIFWTT 329 (565)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 329 (565)
..+.+..++....+..+. .....+...
T Consensus 210 ----------------------------------------------------~~~~v~~~~~~W~lsllY~~tFG~Fvgf 237 (417)
T COG2223 210 ----------------------------------------------------QLKAVFSNKDTWLLSLLYFATFGGFVGF 237 (417)
T ss_pred ----------------------------------------------------HHHHHhcCcchHHHHHHHHHHHHHHHHH
Confidence 000001011111111111 111111122
Q ss_pred hcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHH
Q 008450 330 YAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAA 409 (565)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~ 409 (565)
..+++.++..+. ... ....+...........+.-|+.+++.||+..+ +...+.+..++++...
T Consensus 238 s~~l~~~~~~~f---g~~----~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~----------rv~~~~f~~~~~~~~~ 300 (417)
T COG2223 238 SAYLPMYLVTQF---GLS----PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR----------RVTLAVFVGMALAAAL 300 (417)
T ss_pred HHHHHHHHHHhc---CCC----hhhHHHHHHHHHHHHHHHHhccchhhhhccch----------hHHHHHHHHHHHHHHH
Confidence 222222222221 111 12233444445555556666666666665554 4466677777777766
Q ss_pred HHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhH
Q 008450 410 AALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSF 489 (565)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~ 489 (565)
+.+.... .+...+....+..++...+..++-+...+.++...+|+ +.|...|+...+..+|++.-|.
T Consensus 301 l~~~~~~------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~ 367 (417)
T COG2223 301 LSLFLTG------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPL 367 (417)
T ss_pred HHccccc------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhH
Confidence 6654211 00012333344444555555555556666677767765 5888999999999999988888
Q ss_pred HhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 490 LVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 490 l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
..+...+.++ .+...|+++..+.+++.+..+..+.+.+
T Consensus 368 ~~g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 368 AFGVSLDLTG---------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred HHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 8887764332 2466789999999999998888876643
No 81
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=1.1e-18 Score=187.91 Aligned_cols=131 Identities=18% Similarity=0.219 Sum_probs=112.1
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
.+.+.+++++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..++.++.++++++.....-+
T Consensus 47 ~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~~l~~~~~~a~---------- 115 (438)
T PRK10133 47 ILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGAALFWPAAEIM---------- 115 (438)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcC----------
Confidence 345566889999999999999999999999999999999999 999999999999999998864321102
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
++..++++|+++|+|.|...+..++++.|+.|+++ |...++.......+|..+|+.+++.+.
T Consensus 116 -----------~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 116 -----------NYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999766655 666688888889999999998887654
No 82
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=1.7e-19 Score=188.51 Aligned_cols=158 Identities=16% Similarity=0.124 Sum_probs=129.2
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
.++....++...+.++.++++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~~~~~~~~~ 88 (366)
T TIGR00886 10 FFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIPCLWAGLAV 88 (366)
T ss_pred HHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555555555579999999999999999999999999999999999999 999999999999999999988873
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
. +++.++++|+++|++.+.. +...++++|++|+++ |+++.++.....++|
T Consensus 89 ~-----------------------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g 138 (366)
T TIGR00886 89 Q-----------------------SYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGLAAGWGNMG 138 (366)
T ss_pred h-----------------------hHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHHHHHHhHHH
Confidence 0 2777899999999996654 667899999999988 999999999888888
Q ss_pred HHHHHHHHHHhcc----------cccchhhHHH-HHHHHH
Q 008450 184 TLMAVTVLVYIQD----------EISRSVGYGI-CSVAMF 212 (565)
Q Consensus 184 ~~lg~~i~g~l~~----------~~gw~~~f~i-~~~~~~ 212 (565)
..+++.+++.+.. ..+||+.|++ .++...
T Consensus 139 ~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 178 (366)
T TIGR00886 139 GGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILL 178 (366)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHH
Confidence 8888877776554 3489999944 344433
No 83
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.85 E-value=2.5e-19 Score=187.05 Aligned_cols=331 Identities=12% Similarity=0.111 Sum_probs=211.1
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
+.......+.+.+++|.+..+.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.+ .. +
T Consensus 16 ~~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~---~----- 85 (355)
T TIGR00896 16 LTSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA---P----- 85 (355)
T ss_pred cccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh---c-----
Confidence 34445556677889999999999999999999999999999999999 99999999988888777665 33 2
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
+.+.+++.|++.|+|.+...+..+.++.|.+| ++ |++++++++...++|..+++.++
T Consensus 86 ----------------~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 86 ----------------GTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred ----------------cHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 26778899999999999988888888888886 45 99999999999999999999999
Q ss_pred HHhcccc--cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccc
Q 008450 192 VYIQDEI--SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASR 269 (565)
Q Consensus 192 g~l~~~~--gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (565)
+.+.+.. +||+.|.+.++..++...... ++.++++++..+. .
T Consensus 143 ~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--------------------~------------- 186 (355)
T TIGR00896 143 VPLAQHSGGHWQQALAWWALPALLALLAWI---PQVRRRVAANQTT--------------------T------------- 186 (355)
T ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHh---hhhccccCCCCCC--------------------C-------------
Confidence 9887765 399998876654433322211 1111111000000 0
Q ss_pred cCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccc
Q 008450 270 IHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIG 349 (565)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (565)
+..+ .+..++++..............++....+++ .+... ...+
T Consensus 187 --------------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp-~~~~~-~g~~---- 230 (355)
T TIGR00896 187 --------------------------RLTP----VRIWRSPLAWQVTVFFGLQSGLYYSLIGWLP-AILIS-HGAS---- 230 (355)
T ss_pred --------------------------CCCC----chhhcCHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-cCCC----
Confidence 0000 0001111111111111111111222111121 12111 1111
Q ss_pred ccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCC
Q 008450 350 RFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTA 429 (565)
Q Consensus 350 ~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (565)
....+.......+..++..++.+++.||+.+| ++.+.++.++..++...+.+..
T Consensus 231 --~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~---------~~~~~~~~~~~~~~~~~~~~~~--------------- 284 (355)
T TIGR00896 231 --AATAGSLLALMQLAQAASALLIPALARRVKDQ---------RGIVAVLAVLQLVGLCGLLFAP--------------- 284 (355)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhHHHHHhhhccc---------hHHHHHHHHHHHHHHHHHHHhh---------------
Confidence 11233445555666677777777776654322 1234566666666666554431
Q ss_pred CcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccC-CchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcc
Q 008450 430 TLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKS-PKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVT 498 (565)
Q Consensus 430 ~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~-P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~ 498 (565)
... .....++.+++.+..+|...+.+.+.. +++.++..+++.+....++..++|.+.+.+.+.+
T Consensus 285 ---~~~--~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~ 349 (355)
T TIGR00896 285 ---MHG--LWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDIS 349 (355)
T ss_pred ---hhH--HHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 112356778898888888777766554 4577899999999888999999999999886543
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.84 E-value=3.9e-18 Score=182.01 Aligned_cols=157 Identities=13% Similarity=0.190 Sum_probs=134.6
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
++...+.+.+++++|++..|.+++.+.+.++..+++++.|++.||+ |||+++.+++++++++.+++..+...+
T Consensus 20 ~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~l~~~~~~~~------ 92 (410)
T TIGR00885 20 DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAFLFWPAAEIM------ 92 (410)
T ss_pred HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHhhc------
Confidence 4556677888999999999999999999999999999999999999 999999999999999988876552212
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
+++.++++|++.|+|.|...+..++++.+..|+++ |++..++.+...++|..+||.+++
T Consensus 93 ---------------~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~~g~~i~~ 151 (410)
T TIGR00885 93 ---------------NYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPFGSIIGMVVAQ 151 (410)
T ss_pred ---------------cHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999998887 888899999999999999999988
Q ss_pred Hhcc--------------------------cccchhhHHHHHHHHHHHHHH
Q 008450 193 YIQD--------------------------EISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 193 ~l~~--------------------------~~gw~~~f~i~~~~~~~~~~~ 217 (565)
.+.. ..+||++|.+.+++.++..++
T Consensus 152 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 152 QLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7742 246999998877765544333
No 85
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.84 E-value=1.3e-18 Score=191.07 Aligned_cols=422 Identities=12% Similarity=0.124 Sum_probs=240.7
Q ss_pred HHHHHHHHHhhhcC-----CCCc--hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 33 GIAVNLVTYLVGTM-----HLPS--ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 33 ~~~~~l~~yl~~~l-----~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+..+.+..++.+.. ..+. .+.+|+.+.+.++..++++++|+++|++ |||++++++.+++.+|.++++++.+
T Consensus 64 g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a~~- 141 (513)
T KOG0254|consen 64 GGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALAPS- 141 (513)
T ss_pred ccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 56666666666532 1112 3458999999999999999999999999 9999999999999999999999943
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
...+.++|+++|+|.|+.....+.+++|..|.+. ||...+.++...++|..
T Consensus 142 -----------------------~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~ 192 (513)
T KOG0254|consen 142 -----------------------WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGIL 192 (513)
T ss_pred -----------------------HHHHHHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHhccc-ccchhhHHHHHHHHHHHHHHHHhc--cccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcccc
Q 008450 186 MAVTVLVYIQDE-ISRSVGYGICSVAMFMAIIIFLAG--TKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYE 262 (565)
Q Consensus 186 lg~~i~g~l~~~-~gw~~~f~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (565)
++..++....+. ++||..+.+..+.+++..+.+++. .|++..+.. ...+..+.+..... .. +.+
T Consensus 193 ~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g---~~~~a~~~l~~l~g---~~-~~~------ 259 (513)
T KOG0254|consen 193 LGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKG---RLEEAKRSLKRLRG---LS-PED------ 259 (513)
T ss_pred HHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcC---ChHHHHHHHHHHhC---CC-Ccc------
Confidence 995544444332 489998888776665544443332 222211111 11111111111111 00 000
Q ss_pred CCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhh
Q 008450 263 DTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQAT 342 (565)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (565)
..+....+. .....+... .+....|. ...+...+|+......+...+................+..
T Consensus 260 ---------~~~~~~~~~-~~~~~~~~~--~~~~~~~~--~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~ 325 (513)
T KOG0254|consen 260 ---------VEVELELLK-IKLLVEAEV--AEGKASWG--ELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA 325 (513)
T ss_pred ---------hHHHHHHHH-HHHHHhhhc--ccccccHH--HhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc
Confidence 000000000 000000000 00000010 0000112222222222222222211111111111112211
Q ss_pred cccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008450 343 TMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVAR 422 (565)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~ 422 (565)
..+.. ......+..+...+...+...++|+++|| ..+..|...+.+++++++...........
T Consensus 326 g~~~~-------~~~~~~~~~~v~~~~t~~~~~lvd~~gRr----------~lll~s~~~m~~~~~~~~~~~~~~~~~~~ 388 (513)
T KOG0254|consen 326 GLKSD-------TFLASIILGVVNFLGTLVATYLVDRFGRR----------KLLLFGAAGMSICLVILAVVGVFALYYPN 388 (513)
T ss_pred CCCCc-------hHHHHHHHHHHHHHHHHHHHHHHHHhccH----------HHHHHhHHHHHHHHHHHHHHHHHhccCCC
Confidence 11111 11122222222223333334555665665 34788888888888877755332110000
Q ss_pred hcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC
Q 008450 423 AVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG 502 (565)
Q Consensus 423 ~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~ 502 (565)
. .....+..+....+..........|..+.+..|.+|.+.|+++.++...++++.+.+-...........+
T Consensus 389 ~------~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~--- 459 (513)
T KOG0254|consen 389 S------SKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG--- 459 (513)
T ss_pred c------ccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 0 0011122222233333334444457778899999999999999999999999888777666555432110
Q ss_pred CCCccccccccchhhHHHHHHHHHHHHHHH-HHhhhhhhcCCCCCccchh
Q 008450 503 GGGWLADNINRGRLDLFYGLLAILSIINLV-IYLICAVWYKPKKPKAGIQ 551 (565)
Q Consensus 503 ~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~-~~~~~~~~~~~~~~~~~~~ 551 (565)
....|..+++++.+... ..+++.+|+|+++.++..+
T Consensus 460 -------------~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 460 -------------IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred -------------ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 13456777777777777 6788899999988776543
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.83 E-value=2.4e-18 Score=179.70 Aligned_cols=160 Identities=13% Similarity=0.135 Sum_probs=125.9
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc----ccchhHH-HHHHHHHHHHHHHHHHHhhhc
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF----LGRYKTI-AIFAAVQTLGTGMLAMVTKLR 106 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~~-~~~~~~~~~~~~~~a~~~~~~ 106 (565)
+++.....+.+.+++|+|.+|.+++... .+...+ .+++|+++||+ +||||.+ +.+.++.++...++++...
T Consensus 4 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-- 79 (356)
T TIGR00901 4 LGLVGNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-- 79 (356)
T ss_pred chhHHhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 3455666666777899999999999655 444444 89999999997 3899875 5666667666666665521
Q ss_pred ccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHH
Q 008450 107 QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 186 (565)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~l 186 (565)
..+.+.+.+..++.+++.+...+...+++.|++|+++ |+++.++...+.++|.++
T Consensus 80 -------------------~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~ 134 (356)
T TIGR00901 80 -------------------STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLL 134 (356)
T ss_pred -------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHH
Confidence 1246667777778888889899999999999999888 999999999999999999
Q ss_pred HHHHHHHhccccc--------chhhHHHHHHHHHHHHHHHHh
Q 008450 187 AVTVLVYIQDEIS--------RSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 187 g~~i~g~l~~~~g--------w~~~f~i~~~~~~~~~~~~~~ 220 (565)
++.+++++....+ ||..|++.+++.+++.+..++
T Consensus 135 ~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 135 SGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888 999999988776665555443
No 87
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.83 E-value=1.7e-17 Score=181.11 Aligned_cols=377 Identities=12% Similarity=0.077 Sum_probs=224.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc----ccchhH-HHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF----LGRYKT-IAIFAAVQTLGTG 97 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~-~~~~~~~~~~~~~ 97 (565)
..+..-+..+.....++.+++ +.|.+..+++.+ +...... +..+++|+++||+ +||||. +.++.+...++..
T Consensus 20 l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~ 96 (491)
T PRK11010 20 LGFASGLPLALTSGTLQAWMT-VENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIA 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHH
Confidence 334444555555566777765 569999999886 3333332 6899999999996 277775 6677777777777
Q ss_pred HHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh
Q 008450 98 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 177 (565)
Q Consensus 98 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (565)
++++.. | ..+.+.+.+.+++.+++.+...+...++..|++|+++ |+++.++..
T Consensus 97 ~~a~~~--~-------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~~~i~~ 149 (491)
T PRK11010 97 AMGFLE--P-------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAGAAISV 149 (491)
T ss_pred HHHHcC--C-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHHHHHHH
Confidence 776652 1 1247788899999999999999999999999999888 999999999
Q ss_pred HHHHHHHHHHHHHHHHhcc-cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCC
Q 008450 178 FFISLGTLMAVTVLVYIQD-EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCN 256 (565)
Q Consensus 178 ~~~~lg~~lg~~i~g~l~~-~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (565)
.+.++|.++++.+++++.+ ..|||..|++.+++.++..+..+.. ++.++++++++...+
T Consensus 150 ~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~~-~e~~~~~~~~~~~~~------------------- 209 (491)
T PRK11010 150 LGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLLA-PEPTDTIPVPKTLEQ------------------- 209 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHhc-CCCccccccccchhh-------------------
Confidence 9999999999999999988 5799999999887666554443332 211000000000000
Q ss_pred cCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchh
Q 008450 257 VGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITF 336 (565)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (565)
....++ . +..++++........+.............+ .
T Consensus 210 ----------------~~~~~l---~----------------------~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~-~ 247 (491)
T PRK11010 210 ----------------AVVAPL---R----------------------DFFGRNNAWLILLLIVLYKLGDAFAMSLTT-T 247 (491)
T ss_pred ----------------hHHHHH---H----------------------HHHcCcCHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 000000 0 000011111111111111111111111111 2
Q ss_pred hhhhhhcccccccccccCcchhh-hhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008450 337 SVEQATTMERSIGRFQIPAGSLT-VFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVER 415 (565)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~ 415 (565)
+..+..+.+.. ..+... ....+..++...+.+++.+|+.+| +.+.++.++..++...+.....
T Consensus 248 ~l~~~~G~s~~------~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~----------~~l~i~~~l~~l~~l~~~~l~~ 311 (491)
T PRK11010 248 FLIRGVGFDAG------EVGLVNKTLGLLATIVGALYGGILMQRLSLF----------RALMIFGILQGVSNAGYWLLSI 311 (491)
T ss_pred HHHHhcCCCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH----------HHHHHHHHHHHHHHHHHHHHHh
Confidence 22211111111 122222 233445566667777776666544 1233344443333322211110
Q ss_pred HHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 416 KRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
. ..+...+....++..+..++..+..+++..+..|++.+++..|+.+....+|..+++.+.+.+.
T Consensus 312 ~---------------~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~ 376 (491)
T PRK11010 312 T---------------DKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFV 376 (491)
T ss_pred c---------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 1122333444555555555556667888888999999999999999999999998888888876
Q ss_pred hcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhh
Q 008450 496 KVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 538 (565)
Q Consensus 496 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~ 538 (565)
+.. | +...|.+.+++++++++..+...
T Consensus 377 ~~~------G----------~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 377 EAH------G----------WPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHh------C----------hHHHHHHHHHHHHHHHHHHHHHH
Confidence 421 1 35678888888888877776653
No 88
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.81 E-value=7.4e-17 Score=171.59 Aligned_cols=163 Identities=12% Similarity=0.081 Sum_probs=128.4
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccc----cch-hHHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFL----GRY-KTIAIFAAVQTLGTGML 99 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~----Grr-~~~~~~~~~~~~~~~~~ 99 (565)
+.+-+.+.-....+|.|++ +.|++..|+|++...... .+..+++|+++||+. ||| +.+.++.++.+++..++
T Consensus 9 ~~~~~~~~~~~~~~~~~l~-~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMT-VEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHhhhHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 3444444445566778876 569999999999766665 689999999999982 565 47888888888777777
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
++... ..+.+.+++..++.++..+...+...+++.|++|+++ |+++.++...+
T Consensus 86 ~~~~~---------------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g 138 (402)
T PRK11902 86 AFCPP---------------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLG 138 (402)
T ss_pred HhcCc---------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHH
Confidence 66521 1246667777777888889899999999999999998 99999999999
Q ss_pred HHHHHHHHHHHHHHhccc-ccchhhHHHHHHHHHHHHHH
Q 008450 180 ISLGTLMAVTVLVYIQDE-ISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~~-~gw~~~f~i~~~~~~~~~~~ 217 (565)
.++|.++++.+++++.+. .|||..|++.++..++..+.
T Consensus 139 ~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 139 YRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 999999999999988885 59999999988766554443
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.79 E-value=3.3e-17 Score=164.88 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=107.5
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCc
Q 008450 46 MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQAS 125 (565)
Q Consensus 46 l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (565)
.+-+..-.|.+-+.|.+.++++++.+|.++||+ |||+++.+|.+..++...+.+.+.+
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S~~--------------------- 120 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALSRN--------------------- 120 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 334556678899999999999999999999999 9999999999999999888888854
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 126 GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 126 ~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
+..++.+|++.|+.-|-. ..+.++++|++++++ |+..++.......+|.++||.+||++.+
T Consensus 121 ---F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 ---FAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred ---HHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 666778899999999887 567799999999998 9999999999999999999999999988
No 90
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.78 E-value=5.3e-18 Score=171.56 Aligned_cols=148 Identities=18% Similarity=0.149 Sum_probs=136.5
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCC
Q 008450 45 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 124 (565)
Q Consensus 45 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 124 (565)
+.+-...++|++.+++.+.+.+..++.|.+.||+ |+|-.+++|++++.+.++++++.++
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg~s-------------------- 158 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFGNS-------------------- 158 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHcch--------------------
Confidence 4566789999999999999999999999999998 9999999999999999999999955
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhH
Q 008450 125 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGY 204 (565)
Q Consensus 125 ~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f 204 (565)
+++++++|.+||+|.++...+..++++|.+|++.+ |+++++.......+|-++||.+||.+.+..|++.+|
T Consensus 159 ----y~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPF 229 (464)
T KOG3764|consen 159 ----YPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPF 229 (464)
T ss_pred ----hHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcH
Confidence 67799999999999999999999999999998874 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 008450 205 GICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 205 ~i~~~~~~~~~~~~~~~~ 222 (565)
.+.++.+++...+-++..
T Consensus 230 lVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 230 LVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHHHHHHHHHHHhee
Confidence 999988887666655543
No 91
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=1.6e-16 Score=174.86 Aligned_cols=140 Identities=17% Similarity=0.102 Sum_probs=126.9
Q ss_pred hcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccC
Q 008450 44 GTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQ 123 (565)
Q Consensus 44 ~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 123 (565)
+.++.+.....+..+.+.++..+++++.|+++||+ |||++++.++++.+++.++.+++.+
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a~~------------------- 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFAPN------------------- 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHhCc-------------------
Confidence 45677788889999999999999999999999997 9999999999999999999999943
Q ss_pred CcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhh
Q 008450 124 ASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVG 203 (565)
Q Consensus 124 ~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~ 203 (565)
++.+.+.|++.|++.++...+...+++|.+++++ |+.+.++ ......++.+++++++++.. +||+.
T Consensus 171 -----~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~ 236 (521)
T KOG0255|consen 171 -----YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWL 236 (521)
T ss_pred -----HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHH
Confidence 8889999999999999999999999999999999 9999999 88888888889999999877 89999
Q ss_pred HHHHHHHHHHHHHH
Q 008450 204 YGICSVAMFMAIII 217 (565)
Q Consensus 204 f~i~~~~~~~~~~~ 217 (565)
+++..+..++.++.
T Consensus 237 ~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 237 FWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHH
Confidence 99987776655554
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.77 E-value=2.5e-16 Score=165.75 Aligned_cols=154 Identities=10% Similarity=0.015 Sum_probs=136.0
Q ss_pred HHHHHHhhhcCCCCchh-hhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSAT-SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
+.+.+|+.+++|++..| .|.+.+++..++.++.+++|+++||+ |.|+++.++++...+.+++.+++++
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa~S---------- 114 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLGTS---------- 114 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 44788999999999999 99999999999999999999999999 9999999999999999999999855
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
...+.+.|++.|++.|+.. +...++..++|+++ |+++.++...+.++|.++++++++++
T Consensus 115 --------------l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 115 --------------VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred --------------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7779999999999999999 99999999999999 99999999999999999999999994
Q ss_pred cccccchhhHH---HHHHHHHHHHHHHHhcc
Q 008450 195 QDEISRSVGYG---ICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 195 ~~~~gw~~~f~---i~~~~~~~~~~~~~~~~ 222 (565)
..+|||+-+. |......+++++.++++
T Consensus 174 -~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 174 -VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred -HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4678887554 44444455555555543
No 93
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.77 E-value=1.1e-15 Score=161.89 Aligned_cols=369 Identities=15% Similarity=0.151 Sum_probs=218.3
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
..++++.|+. +.|+|..|+|.+.+...+..+++++++|+++||...+||.+.+..++.++...+....+
T Consensus 21 ~~p~~~~~L~-~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~---------- 89 (400)
T PF03825_consen 21 FLPYLPLYLE-SRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSS---------- 89 (400)
T ss_pred HHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 4567888886 56899999999999999999999999999999985677877776666555544444432
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHH-HH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV-LV 192 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i-~g 192 (565)
+++.+++..++..+......|...++..+...+ +++-++......++|.+++... ++
T Consensus 90 --------------~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlwGSiGf~~~~~~~~~ 147 (400)
T PF03825_consen 90 --------------SFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLWGSIGFIVAALAFGG 147 (400)
T ss_pred --------------cHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhhhhHHHHHHHHHHHH
Confidence 266677777778888888888888887777653 4445777777888888777443 23
Q ss_pred Hhccccc---chhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccc
Q 008450 193 YIQDEIS---RSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASR 269 (565)
Q Consensus 193 ~l~~~~g---w~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (565)
++....+ ..+.+++.++..++.. .+.+..|+.+.++..+++.++
T Consensus 148 ~~~~~~~~~~~~~~~~i~~~~~~ll~-~~~l~lp~~~~~~~~~~~~~~-------------------------------- 194 (400)
T PF03825_consen 148 LLGGYLGISGTSLIFYIAAILSLLLA-GFALFLPKTPPKRSAKESVKK-------------------------------- 194 (400)
T ss_pred HHHhhhccccccHHHHHHHHHHHHHH-HHHHhCCCCccccccCCCccc--------------------------------
Confidence 3332222 2344555544332222 222222322211100000000
Q ss_pred cCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccc
Q 008450 270 IHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIG 349 (565)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (565)
....+. .+..++++.....+..+.....+.. +..+.+.+..+.......
T Consensus 195 ------~~~~~~----------------------~~llk~~~~~~Fll~~~l~~~~~~~-~~~f~~~yl~~~gg~~~~-- 243 (400)
T PF03825_consen 195 ------LLGLDA----------------------LKLLKNPRFLVFLLAAFLIGISHAA-YYTFFSIYLQELGGYSGS-- 243 (400)
T ss_pred ------ccchHH----------------------HHHhcCccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcccchhh--
Confidence 000000 0011222222222222222222222 222223333321111101
Q ss_pred ccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCC
Q 008450 350 RFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTA 429 (565)
Q Consensus 350 ~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (565)
..+....+..+.-+....+.+++ .+| ++..+.+.++.+..++-..++++..
T Consensus 244 ----~~g~~~~l~~~aEi~~f~~~~~~----~~r------~g~~~ll~~a~~~~~vR~~l~a~~~--------------- 294 (400)
T PF03825_consen 244 ----TIGILWALGVVAEIPFFFFSGRF----LKR------FGIKWLLLLALVAYAVRWLLYAYFS--------------- 294 (400)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHH----HHh------cCHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 11222233334444444444444 343 3445668888888888888877641
Q ss_pred Ccceeehh----hHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHH-HHHHHHHhhHHhhhhhhcccCCCCC
Q 008450 430 TLPVSVFL----LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTT-LSLGFFVSSFLVAVVKKVTGSKGGG 504 (565)
Q Consensus 430 ~~~~s~~~----li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~-~~lg~~ig~~l~~~l~~~~~~~~~~ 504 (565)
.+.+. ..+...+.|+..++...+...++.+.+|++.|++++++++.. ..+|..+|+.++|.+.+..+.++.
T Consensus 295 ---~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~- 370 (400)
T PF03825_consen 295 ---DPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGM- 370 (400)
T ss_pred ---CCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhh-
Confidence 12222 233456799999999999999999999999999999999876 479999999999998764432211
Q ss_pred CccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 505 GWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 505 ~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
-.+..++.+.+++.++..+++++..+++
T Consensus 371 ---------~~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 371 ---------FDWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred ---------hhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 1134567778888888887777776553
No 94
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.76 E-value=1.5e-15 Score=163.19 Aligned_cols=431 Identities=14% Similarity=0.102 Sum_probs=247.9
Q ss_pred HHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhc----cccchhHHHHH-HHHHHHHHHHHHH
Q 008450 27 ERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADT----FLGRYKTIAIF-AAVQTLGTGMLAM 101 (565)
Q Consensus 27 ~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~~~~~-~~~~~~~~~~~a~ 101 (565)
-++++-...+++++|+ +++|.+..+.+++..+..+...+..|+.|+++|| + ||||.++++ .+...++..++++
T Consensus 16 iq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~~~~~l~ll~~ 93 (477)
T TIGR01301 16 VQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAALVAFAVILIGF 93 (477)
T ss_pred HHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHHHHHHHHHHHh
Confidence 3445444556667765 5899999999999999999999999999999995 7 999998875 5556666677766
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
+.++..+...+ ............+.++..+..++.....+...++++|..|+++++ ++.+.++...+.+
T Consensus 94 ~~~~~~~~~~~-------~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~~~~~~~~ 162 (477)
T TIGR01301 94 AADIGHLFGDN-------LDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANAYFSFFMA 162 (477)
T ss_pred Cchhhhhcccc-------ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHHHHHHHHH
Confidence 63321100000 000000111234455555566688888888899999999988721 4678999999999
Q ss_pred HHHHHHHHHHHHh--ccc-------------ccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHH
Q 008450 182 LGTLMAVTVLVYI--QDE-------------ISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAI 246 (565)
Q Consensus 182 lg~~lg~~i~g~l--~~~-------------~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (565)
+|.++|+.++++. .+. .+.+..|++.+++.++..++..+..++.+..++++.+.+
T Consensus 163 lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~---------- 232 (477)
T TIGR01301 163 IGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS---------- 232 (477)
T ss_pred HHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh----------
Confidence 9999999999875 221 157889998887777666665554444321111100000
Q ss_pred HhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHH
Q 008450 247 KKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIF 326 (565)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (565)
.++.. . +......+.+. ......-.|.+...+.+-....+.
T Consensus 233 -------------~~~~~---~--~~~~~~~~~~i---------------------~~~~~~mP~~m~~l~~vqffsW~a 273 (477)
T TIGR01301 233 -------------EAAPP---S--KHGEEAFFGEL---------------------FGAFKYLPRPVWILLLVTCLNWIA 273 (477)
T ss_pred -------------hcccc---c--ccchhhhHHHH---------------------HHHHHHCCHHHHHHHHHHHHHHHH
Confidence 00000 0 00000000000 000011123444455555556666
Q ss_pred Hhhhcccchhhhhhhhccccc--ccccccC---cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHH
Q 008450 327 WTTYAQMITFSVEQATTMERS--IGRFQIP---AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLV 401 (565)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~ 401 (565)
|..+..+.+.++-+..+-... ...+... ..+....+.+...+ ...++.++.+|... +...-.++.+
T Consensus 274 ~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i----~s~~l~~l~~~~g~-----~k~~~~~s~~ 344 (477)
T TIGR01301 274 WFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGI----TSIGMEKLCRGWGA-----GKRLWGIVNI 344 (477)
T ss_pred HHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhcc-----chhHHHHHHH
Confidence 666666665554432221111 0001000 11112223333333 33333444444321 1122377888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhcCCCC-CCccee-ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc--hhhHHHHHHHH
Q 008450 402 LSIVGMAAAALVERKRLSVARAVGLTT-ATLPVS-VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK--GMKTMSTGLFL 477 (565)
Q Consensus 402 l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s-~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~--~~rg~~~gl~~ 477 (565)
+.+++++...+...-..+....++..+ -..+.. .+..++.+.+.|+..+..+..-++++++..|+ +..|..+|+.|
T Consensus 345 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN 424 (477)
T TIGR01301 345 ILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLN 424 (477)
T ss_pred HHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHH
Confidence 888888877665321000000000000 000011 25567788899999999999999999999995 45599999999
Q ss_pred HHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 478 TTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 478 ~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
++--+...+.+...+.+....++ +....+.+.++..+++.+..+...++.+
T Consensus 425 ~~I~lpQii~sl~~g~~~~~~g~--------------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 425 LAIVIPQIIVSLGSGPWDQLFGG--------------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--------------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999988877765433221 1244677888888888888877776643
No 95
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.75 E-value=4.7e-16 Score=169.10 Aligned_cols=361 Identities=12% Similarity=0.079 Sum_probs=207.6
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhh----ccccc-hhHHHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLAD----TFLGR-YKTIAIFAAVQTLGTGM 98 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Gr-r~~~~~~~~~~~~~~~~ 98 (565)
++...+.+..+..+++.|+++.+|+++.++|.+.....+.-++..|+.|+++| |+ || |+.++.+.+..+++..+
T Consensus 15 ~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~~l 93 (473)
T PRK10429 15 AFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVLFL 93 (473)
T ss_pred hhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHHHH
Confidence 34455666667788999999999999999999999999999999999999999 66 77 55666677777776655
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
+-.. |++ ++...+..+++.-.+.+++.........+++.|..++.+| |.+..++-..
T Consensus 94 lf~~---p~~---------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e-----R~~l~~~~~~ 150 (473)
T PRK10429 94 LFSA---HLF---------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE-----REQLVPYPRF 150 (473)
T ss_pred HHcC---CCC---------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH-----HHHHHHHHHH
Confidence 5332 210 1112344566666677888888888899999998854433 8888888677
Q ss_pred HHHHHHHHHHHHHHHhcc-------cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccc
Q 008450 179 FISLGTLMAVTVLVYIQD-------EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKM 251 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~-------~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (565)
..++|..+++.+...+.. ..+|+....+.+++.++..++.+...++.. +++..++..
T Consensus 151 ~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~--------------- 214 (473)
T PRK10429 151 FASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY-SSDNQVSAE--------------- 214 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC-Ccccccccc---------------
Confidence 777776665544443211 224666666655555544433333222210 000000000
Q ss_pred cCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhc
Q 008450 252 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 331 (565)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (565)
.+..++.+.. +.....|.+...+..............
T Consensus 215 ---------------------~~~~~~~~~~----------------------~~~~~n~~~~~ll~~~~~~~~~~~~~~ 251 (473)
T PRK10429 215 ---------------------GSHLTLKDIV----------------------ALIYKNDQLSCLLGMALAYNIASNIIN 251 (473)
T ss_pred ---------------------ccCCCHHHHH----------------------HHHhcCHHHHHHHHHHHHHHHHHHHHh
Confidence 0000000000 001111222222222111112111111
Q ss_pred ccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008450 332 QMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 411 (565)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~ 411 (565)
.....+.... ... ....+.+..+..+..++..++.+++.+++.+| +.+.++.++..++.+.+.
T Consensus 252 ~~~~y~~~y~--~~~-----~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk----------~~~~~~~~~~~~~~~~~~ 314 (473)
T PRK10429 252 GFAIYYFTYV--IGD-----ADLFPYYLSYAGAANLVTLILFPRLVKSLSRR----------ILWAGASIFPVLSCGVLL 314 (473)
T ss_pred hheeeEEEEE--CCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH----------HHHHHHHHHHHHHHHHHH
Confidence 1111111110 000 00112233344455666677777775555444 334555555555544433
Q ss_pred HHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCC-------chhhHHHHHHHHHHHHHHH
Q 008450 412 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTLSLGF 484 (565)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~~~~lg~ 484 (565)
+.... .+.+.+.+++..++.+++.+...+..+++..|..+ .+..|...|...+...+|.
T Consensus 315 ~~~~~--------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~ 380 (473)
T PRK10429 315 LMGLA--------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGS 380 (473)
T ss_pred HHhcc--------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHH
Confidence 21000 01234455667778889999999999999999976 4456778999999999999
Q ss_pred HHhhHHhhhhhhcc
Q 008450 485 FVSSFLVAVVKKVT 498 (565)
Q Consensus 485 ~ig~~l~~~l~~~~ 498 (565)
.+++.+.+.+....
T Consensus 381 al~~~i~g~~l~~~ 394 (473)
T PRK10429 381 AFAAFFIGVVLGLI 394 (473)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999876544
No 96
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.75 E-value=6.9e-16 Score=168.32 Aligned_cols=389 Identities=13% Similarity=0.015 Sum_probs=213.5
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
.....++..++|-+ ....|+.+...++..+..++.|+|+|.| |||.+++.+.++..+|+++++.+++
T Consensus 64 a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA~~----------- 130 (599)
T PF06609_consen 64 ASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATAQN----------- 130 (599)
T ss_pred HHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcCCc-----------
Confidence 34557888889875 6678999999999999999999999999 9999999999999999999998854
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
+..+..+-.+.|+|.|... .....++|..|.+. |.....+.....-.....++.++..+.
T Consensus 131 -------------~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 131 -------------MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred -------------HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 6669999999999987765 45666899999887 876555444433344445666666666
Q ss_pred ccccchhhHHHHHHHHHHHHHHHH-hcc-ccccccCCCCCchHHH-------HHHHHHHHHhccccCCCCcCccccCCcc
Q 008450 196 DEISRSVGYGICSVAMFMAIIIFL-AGT-KRYRYKKSSGSPIVHI-------FQVIVAAIKKRKMDLPCNVGMLYEDTPE 266 (565)
Q Consensus 196 ~~~gw~~~f~i~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (565)
...+|||.|++.++...+++++.+ +.. |+++..+.++.+..+. ...+....-. .... ...|.- ..
T Consensus 191 ~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~-LfLl----gl~wgG-~~ 264 (599)
T PF06609_consen 191 AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLA-LFLL----GLSWGG-YP 264 (599)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHH-HHHH----HHhccC-CC
Confidence 667999999998876555544333 222 2221111211111111 0000000000 0000 000000 00
Q ss_pred ccccCCCcchhHHhHHHHhhcCCCCCCCCCC-CCccccchhhHhHhHHHhHH-HHHHHHHHHHhhhcccchhhhhhhhcc
Q 008450 267 ASRIHHTEQFHFLDKAAIVAEGDFEAGSTPN-PWKLCSVTSVEEVKMVARLL-PIWATTIIFWTTYAQMITFSVEQATTM 344 (565)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (565)
+..|.++.....+-.+........-.+.+.. ..+.+..+..+++|.+...+ ..+.....++. ...++..+..++
T Consensus 265 ~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s----~~~l~p~~~~~v 340 (599)
T PF06609_consen 265 YYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFS----VNILWPQQVVNV 340 (599)
T ss_pred CCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhh
Confidence 0123333333222221111000000000000 01112222333433333222 11222222222 222222222111
Q ss_pred -cccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 345 -ERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARA 423 (565)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~ 423 (565)
+...-+. ....+......+...+.+.+.+.+. ++.+ ..++.+.++.+++.+.+..+.....
T Consensus 341 f~~d~~~~-~~~~~~s~~~~fg~~~g~~i~g~l~----~~ir-----~~Kw~li~~~~~~ta~~Gama~~~~-------- 402 (599)
T PF06609_consen 341 FGSDPISI-TEIGWISSPVGFGSCAGAVILGLLF----SKIR-----HIKWQLIFGSVLMTAFCGAMAAVRP-------- 402 (599)
T ss_pred ccCCCccc-ceeehhhhhHHHHHHHHHHHHHHHH----HHcc-----chhHHHHHHHHHHHHHHHHHHHccC--------
Confidence 1110000 0122333333444444444444442 2211 1223456777777776666654421
Q ss_pred cCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 424 VGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 424 ~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
+ ..+ ..+...++.++|.+...........-..|++.-|+++|+....+.+|+.+|..+...+
T Consensus 403 ------~-n~~--~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 403 ------D-NKN--AAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred ------C-Ccc--hHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 1 112 2234566777777777777777788889999999999999999999999999988654
No 97
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.75 E-value=1.2e-15 Score=165.67 Aligned_cols=372 Identities=12% Similarity=0.109 Sum_probs=215.9
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcccc-----chhHHHHHHHHHH-HHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-----RYKTIAIFAAVQT-LGT 96 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~~~~~~~-~~~ 96 (565)
.++++-+. +.+...+.+++.+++|++.++.+...+...+...+-.+ +|.++||+ + ||+.++++.++.. ++.
T Consensus 34 ~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~-~i~G~rRr~~l~~~~~l~~~~~~ 110 (468)
T TIGR00788 34 VLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTF-PLFGYTKRWYLVLSGLLGSAILY 110 (468)
T ss_pred HHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhc-CCCCccchHHHHHHHHHHHHHHH
Confidence 57777777 77777888899989999999999999999998888666 99999999 7 6777776665542 222
Q ss_pred HHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehh
Q 008450 97 GMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRF 176 (565)
Q Consensus 97 ~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 176 (565)
..++.. ++ ......+.+++.+++.+......-++..|..+ +++ +.++...++.
T Consensus 111 ~~l~~~---~~--------------------~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~~~~s~~ 163 (468)
T TIGR00788 111 GLLPGK---VS--------------------SAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGPSLVSWM 163 (468)
T ss_pred Hhcccc---cc--------------------hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCCCeeeHH
Confidence 222211 11 23334457888999999999999999999998 331 1255677777
Q ss_pred hHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCC
Q 008450 177 FFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCN 256 (565)
Q Consensus 177 ~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (565)
+...++|.++|+.++|++.+.++|+..|++.+++.++..+...+.+++.....|+..+..... ..+
T Consensus 164 ~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~-----~~~--------- 229 (468)
T TIGR00788 164 WGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMN-----MAL--------- 229 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhcccccccccccccccchhh-----hhh---------
Confidence 888889999999999999999999999998877766654433333221000111100000000 000
Q ss_pred cCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccc-h
Q 008450 257 VGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMI-T 335 (565)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 335 (565)
...+......+.. + .......++.+...+.+ ..+.+....... .
T Consensus 230 -------------~~~~~~~~~~~~~---~----------------~l~~~l~~~~i~~~l~f---ifl~~~~~~~~~~~ 274 (468)
T TIGR00788 230 -------------LTLGVLANVKVQI---L----------------GLRGAIQLLEIAKPLIF---IFLSYANLPGASGS 274 (468)
T ss_pred -------------hhhhHHHHHHHHH---H----------------HHHHHHhcHHHHHHHHH---HHHHHhhcCCCCce
Confidence 0000000000000 0 00000011112111111 111011111111 1
Q ss_pred hhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008450 336 FSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVER 415 (565)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~ 415 (565)
.+..+.. .++......+.+.....+..++...+.+++ .+| .+.++.+.++.++..++.....+...
T Consensus 275 ~f~~~~~----~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~----~~~------~~~r~~l~~~~~l~~~~~~~~~~l~~ 340 (468)
T TIGR00788 275 VFCATTQ----CLPGGPSFSGMSKVVGNLGSLCGVGGYDRF----LKT------FPYRLLFGVTTLLYTLSSLFDLILVK 340 (468)
T ss_pred eEEEEcc----cCCCCcchhhhHHHHHHHHHHHHHHHHHHH----Hhh------CCHHHHHHHHHHHHHHHHhCceeeee
Confidence 1111111 111111223334444445555555555544 332 34455567777777766644321100
Q ss_pred HHhhhhhhcCCCCCCc-ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 416 KRLSVARAVGLTTATL-PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 416 ~~~~~~~~~~~~~~~~-~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
. . +... ....++++...++.+++.++.+.+...++.+..|++.+|+..|+.+...++|..+++.+++.+
T Consensus 341 ~-~---------~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l 410 (468)
T TIGR00788 341 R-W---------NLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLL 410 (468)
T ss_pred c-c---------ccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0000 012334555677888888888888899999999999999999999999999999999999888
Q ss_pred hhc
Q 008450 495 KKV 497 (565)
Q Consensus 495 ~~~ 497 (565)
.+.
T Consensus 411 ~~~ 413 (468)
T TIGR00788 411 MET 413 (468)
T ss_pred HHH
Confidence 654
No 98
>PRK09669 putative symporter YagG; Provisional
Probab=99.74 E-value=4.4e-16 Score=167.96 Aligned_cols=353 Identities=12% Similarity=0.076 Sum_probs=204.0
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhc----cccch-hHHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADT----FLGRY-KTIAIFAAVQTLGTGML 99 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr-~~~~~~~~~~~~~~~~~ 99 (565)
+...+.+..+..+++.|+++.+|+++.++|.+.++..+...+..|+.|+++|| + ||| +.++.+.+..+++..++
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~~l~ 97 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVCLLT 97 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHHHHH
Confidence 33444556667889999999999999999999999999999999999999999 5 775 55556667777766555
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
... |+. ........+++...+.+++.........++.+|..++.++ |++..++....
T Consensus 98 f~~---p~~---------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e-----R~~l~~~r~~~ 154 (444)
T PRK09669 98 FYT---PDF---------------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE-----RHSLQSWRFAL 154 (444)
T ss_pred HhC---CCC---------------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH-----HHHHHHHHHHH
Confidence 433 220 0112355566666666777777777788999998855432 88888888888
Q ss_pred HHHHHHHHHHHHHHhcc-------cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcccc
Q 008450 180 ISLGTLMAVTVLVYIQD-------EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 252 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~-------~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
.++|..+++.+...+.. ..+|+..+.+.+++.++..++.++..++. .++++.++ .+..+.+..
T Consensus 155 ~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~-~~~~~~~~-~~~~~~~~~-------- 224 (444)
T PRK09669 155 SFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKER-YTPEVDNS-SSVWKDLKL-------- 224 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEe-cCCCCcCC-CCHHHHHHH--------
Confidence 88887777654443322 34688777777766555544433332221 11110000 000000000
Q ss_pred CCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcc
Q 008450 253 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 332 (565)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (565)
....|.+...+...+...........
T Consensus 225 ------------------------------------------------------~~~n~~~~~l~~~~~~~~~~~~~~~~ 250 (444)
T PRK09669 225 ------------------------------------------------------LLGNSQWRIMFIFNVVLLTAVVTRGG 250 (444)
T ss_pred ------------------------------------------------------HhCCchHHHHHHHHHHHHHHHHHHhh
Confidence 00111111111111111111111111
Q ss_pred cchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008450 333 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 412 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~ 412 (565)
....+... ..+.. . ....+.....+..++..++.+++.+++.+| +.+..+.++..+....+.+
T Consensus 251 ~~~y~~~~--~~~~~----~-~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~----------~~~~~~~~~~~~~~~~~~~ 313 (444)
T PRK09669 251 ATLYYVNY--VLLRP----D-LATLFLVTGMIAGLFGALLSERLLGKFDRV----------RAFKWTIVAFVILSALIFF 313 (444)
T ss_pred hhheeeee--ecCCH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHhChH----------HHHHHHHHHHHHHHHHHHH
Confidence 11111110 01100 0 011222233444455566666665554433 2344455444433322222
Q ss_pred HHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCC-------chhhHHHHHHHHHHHHHHHH
Q 008450 413 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSP-------KGMKTMSTGLFLTTLSLGFF 485 (565)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P-------~~~rg~~~gl~~~~~~lg~~ 485 (565)
.. ..+.+.+++..++.+++.+...+..+++..|..+ ++..|...|+++++..+|..
T Consensus 314 ~~-----------------~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~a 376 (444)
T PRK09669 314 IP-----------------PSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLA 376 (444)
T ss_pred hC-----------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHH
Confidence 21 1234445666788999999999999999998886 34567788999999999999
Q ss_pred HhhHHhhhhhhccc
Q 008450 486 VSSFLVAVVKKVTG 499 (565)
Q Consensus 486 ig~~l~~~l~~~~~ 499 (565)
+|+.+.+.+....+
T Consensus 377 lg~~i~g~ll~~~G 390 (444)
T PRK09669 377 IGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999998876543
No 99
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.73 E-value=1.8e-15 Score=154.39 Aligned_cols=169 Identities=18% Similarity=0.205 Sum_probs=139.3
Q ss_pred CCchhhHHHHHHHhHHHHHH----HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHH
Q 008450 18 PSKTGIELCERLSTMGIAVN----LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQT 93 (565)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~----l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 93 (565)
+.-..+-.+.-+..||+... +.+.+++.++++..|++.+..+++.++++++++.|++.+|+ |+|+.+++++.+++
T Consensus 11 ~~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~a 89 (422)
T COG0738 11 VKLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYA 89 (422)
T ss_pred ceeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHH
Confidence 33344566666667777654 67788889999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhccee
Q 008450 94 LGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFF 173 (565)
Q Consensus 94 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 173 (565)
+|+.++.=+++ ...+..++++.++.|.|.+....+.+++++...++++ -..-+
T Consensus 90 vg~~lF~pAa~---------------------~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rl 142 (422)
T COG0738 90 VGAALFWPAAS---------------------SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRL 142 (422)
T ss_pred HHHHHHhhhhh---------------------hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHH
Confidence 99999864432 2458999999999999999999999999999999976 44447
Q ss_pred ehhhHHHHHHHHHHHHHHHHhccc-------------------ccchhhHHHHHHHHHHH
Q 008450 174 SRFFFFISLGTLMAVTVLVYIQDE-------------------ISRSVGYGICSVAMFMA 214 (565)
Q Consensus 174 ~~~~~~~~lg~~lg~~i~g~l~~~-------------------~gw~~~f~i~~~~~~~~ 214 (565)
++.+....+|+++||.+++++..+ ..++.+|.+.+...++.
T Consensus 143 nl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll 202 (422)
T COG0738 143 NLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLL 202 (422)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 777888999999999999988762 23777777655444433
No 100
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=2.5e-17 Score=169.38 Aligned_cols=404 Identities=14% Similarity=0.092 Sum_probs=223.8
Q ss_pred CCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcch
Q 008450 48 LPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGF 127 (565)
Q Consensus 48 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (565)
+++...+.+..+-.++.++++++.||++||+ |||+++-..++++++++++++++...++ ...
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~~~-----------------~~~ 142 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGTTS-----------------PLG 142 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCCCC-----------------Ccc
Confidence 6677778888999999999999999999999 9999999999999999997777633221 224
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc-----------
Q 008450 128 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD----------- 196 (565)
Q Consensus 128 ~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~----------- 196 (565)
-+..+...|++.|+|.|+-+|...+..+|..-.+. ||...++..++...|.+.|.++.-.+..
T Consensus 143 ~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~ 216 (538)
T KOG0252|consen 143 VMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPST 216 (538)
T ss_pred hhhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCC
Confidence 58889999999999999999999999999877777 9999999888888777776555543321
Q ss_pred ----cccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccCC
Q 008450 197 ----EISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIHH 272 (565)
Q Consensus 197 ----~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (565)
+.=||..|.+.++..++.+..-+.++..-+++.-..... ..+.+. .+.+... -.+
T Consensus 217 ~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~-------~~a~~d--~~k~~~~--~~~---------- 275 (538)
T KOG0252|consen 217 YPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKL-------KQAAGD--MKKVLSV--DIE---------- 275 (538)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCH-------hhhhhc--ccccccc--ccc----------
Confidence 123998888776554443322222111111110000000 000000 0000000 000
Q ss_pred CcchhHHhHHHHhhcCCCCCCCCCCCC-ccccc-hhhHhHhHHHhHHHHHHH-HHHHHhhhcccchhhhhhhhccccccc
Q 008450 273 TEQFHFLDKAAIVAEGDFEAGSTPNPW-KLCSV-TSVEEVKMVARLLPIWAT-TIIFWTTYAQMITFSVEQATTMERSIG 349 (565)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (565)
+.. ...+.. +.++.+ ..+.. ....+-|.++.....|.. -+.++. .....+............
T Consensus 276 -------~~~-~~~~~~----~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~-~nL~~s~I~~~ig~~~~~-- 340 (538)
T KOG0252|consen 276 -------AES-TAESDV----PPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYG-QNLFQSVIFSAIGVIPSA-- 340 (538)
T ss_pred -------hhh-ccccCC----CCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cccHHHHHHHhhccCCCc--
Confidence 000 000000 011111 11111 001122333222222211 111111 010000011100000000
Q ss_pred ccccCcchhhhhhhHHHHHHH-----HHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 350 RFQIPAGSLTVFFVSAILITL-----AVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAV 424 (565)
Q Consensus 350 ~~~~~~~~~~~~~~~~~li~~-----~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~ 424 (565)
.....-.-.+.....+...+ ++...++|.++|| ..-..|++++++-+++++....
T Consensus 341 -~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk----------~iq~~GF~~~~i~~~~~~~~y~--------- 400 (538)
T KOG0252|consen 341 -NTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK----------YIQLMGFFIMTIFFFVIAGPYN--------- 400 (538)
T ss_pred -chHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH----------HHHHhhHHHHHHHHHHHcCCcc---------
Confidence 00000000111112222222 2223345555555 3357788888888877765321
Q ss_pred CCCCCCcceeehhhHHHHHHH-HHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCC
Q 008450 425 GLTTATLPVSVFLLIPQFFLV-GAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGG 503 (565)
Q Consensus 425 ~~~~~~~~~s~~~li~~~~l~-g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~ 503 (565)
+ ..+..-.++.+.+. -++...-..+...+..|.+|.+.||+.-|+...+.-+|+.+|......+.+.
T Consensus 401 ----~--~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~------ 468 (538)
T KOG0252|consen 401 ----Q--LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDH------ 468 (538)
T ss_pred ----c--ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhc------
Confidence 0 11222223333222 2344444567778899999999999999999999999999999988776421
Q ss_pred CCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCCccc
Q 008450 504 GGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPKAG 549 (565)
Q Consensus 504 ~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~~~~ 549 (565)
. .|.+.. ..+.+++++++++++.++.+++- |+++++.++.
T Consensus 469 -~-yp~~~g---~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 469 -N-YPPNIG---VRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEI 508 (538)
T ss_pred -c-CCcccc---chHHHHHHHHHHHHhHheeEEee-cccccCHHHh
Confidence 1 233322 46779999999999998877765 8888776654
No 101
>PRK09848 glucuronide transporter; Provisional
Probab=99.73 E-value=2.9e-15 Score=161.75 Aligned_cols=354 Identities=11% Similarity=0.081 Sum_probs=191.7
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc---ccchhHH-HHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTI-AIFAAVQTLGTGML 99 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~-~~~~~~~~~~~~~~ 99 (565)
++...+.+....++++.|+++.+|+++.++|.+.+...+..++..++.|+++||. .||||.. ..+.+...+...++
T Consensus 17 ~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~ 96 (448)
T PRK09848 17 DVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLV 96 (448)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHH
Confidence 4445566666677888999999999999999999999999999999999999995 2666654 55555555444443
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
... |. ...+.......++...+.+++.+...+...++..+..++.++ |.+..++-...
T Consensus 97 ~~~---~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~~~~~r~~~ 154 (448)
T PRK09848 97 FWV---PT--------------DWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RARLGAARGIA 154 (448)
T ss_pred HhC---cC--------------CCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHHHHHHHHHH
Confidence 211 10 000111234455566677888888888888887777665442 66655554332
Q ss_pred -----HHHHHHHHHHHHHHhcccc--cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcccc
Q 008450 180 -----ISLGTLMAVTVLVYIQDEI--SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 252 (565)
Q Consensus 180 -----~~lg~~lg~~i~g~l~~~~--gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
.+++..++|.+.+...... +|.....+.+++.++..++.....++ ..+.+.+.....+.+..
T Consensus 155 ~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e---~~~~~~~~~~~~~~~~~-------- 223 (448)
T PRK09848 155 ASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRE---NVVRIVAQPSLKISLQT-------- 223 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEe---ccCCCccCCCHHHHHHH--------
Confidence 3456666666665432211 11111111122222221122111111 10000000000000000
Q ss_pred CCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcc
Q 008450 253 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 332 (565)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (565)
..+++.........+.....+. ....
T Consensus 224 -----------------------------------------------------l~~n~~f~~~~~~~~~~~~~~~-~~~~ 249 (448)
T PRK09848 224 -----------------------------------------------------LKRNRPLFMLCIGALCVLISTF-AVSA 249 (448)
T ss_pred -----------------------------------------------------HhCCchHHHHHHHHHHHHHHHH-HHhh
Confidence 0111111111111111111111 1111
Q ss_pred cchhhhhhhhcccccccccccCcchhhhhh-hHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008450 333 MITFSVEQATTMERSIGRFQIPAGSLTVFF-VSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 411 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~ 411 (565)
....+... ..+.... .+.+...+ .+..++..++.+++.+++.+ .+.+.+|.++..++.+.+.
T Consensus 250 ~~~~~~~~------~~g~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~r~g~----------~~~~~~g~~~~~i~~~~~~ 312 (448)
T PRK09848 250 SSLFYVRY------VLNDTGL-FTVLVLVQNLVGTVASAPLVPGMVARIGK----------KNTFLIGALLGTCGYLLFF 312 (448)
T ss_pred hheeeEee------ecCChHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhCc----------HHHHHHHHHHHHHHHHHHH
Confidence 11112111 1110000 11111222 33345556666666544333 2446778877777766554
Q ss_pred HHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCch-------hhHHHHHHHHHHHHHHH
Q 008450 412 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKG-------MKTMSTGLFLTTLSLGF 484 (565)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~-------~rg~~~gl~~~~~~lg~ 484 (565)
+.. ..+.+.+++..++.++|++...+..+++..|..|.+ .+|.++|++++.+.+|.
T Consensus 313 ~~~-----------------~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 313 WVS-----------------VWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred HcC-----------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHH
Confidence 321 123445566778899999999999999999988754 46999999999999999
Q ss_pred HHhhHHhhhhhhcc
Q 008450 485 FVSSFLVAVVKKVT 498 (565)
Q Consensus 485 ~ig~~l~~~l~~~~ 498 (565)
.+|+.+.+.+....
T Consensus 376 aig~~i~g~~l~~~ 389 (448)
T PRK09848 376 AIGGSIPAFILGLS 389 (448)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999998876543
No 102
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.73 E-value=2.3e-21 Score=209.01 Aligned_cols=140 Identities=21% Similarity=0.306 Sum_probs=119.2
Q ss_pred hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHH
Q 008450 51 ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMG 130 (565)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (565)
.+.+++.+...++..++++++|+++||+ |||++++++.++..++.++.++++.. .+++
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~ 103 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY---------------------NNFW 103 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc---------------------cccc
Confidence 3568899999999999999999999999 99999999999999999999998411 1378
Q ss_pred HHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc---ccchhhHHHH
Q 008450 131 VLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE---ISRSVGYGIC 207 (565)
Q Consensus 131 ~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~---~gw~~~f~i~ 207 (565)
.+.++|+++|+|.|+..+....++.|..|++. |++..++.+....+|.+++..++-.+.+. .+||+.+.+.
T Consensus 104 ~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~ 177 (451)
T PF00083_consen 104 MLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFG 177 (451)
T ss_pred cccccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccc
Confidence 89999999999999999999999999999999 99999999999999998887666544332 4599999887
Q ss_pred HHHHHHHHHHH
Q 008450 208 SVAMFMAIIIF 218 (565)
Q Consensus 208 ~~~~~~~~~~~ 218 (565)
.+..++.++..
T Consensus 178 ~~~~l~~~~~~ 188 (451)
T PF00083_consen 178 AIPSLLVLLLR 188 (451)
T ss_pred ccccccccccc
Confidence 77665444433
No 103
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.72 E-value=1.5e-15 Score=170.16 Aligned_cols=188 Identities=16% Similarity=0.212 Sum_probs=146.2
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~ 107 (565)
+....+......+.+.++++++..+.|++.+.+.++..++.++.|+++||+ ||||.+.++++++++|++++++.+.+..
T Consensus 45 ~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~lg~ll~alphf~~~ 123 (633)
T TIGR00805 45 GLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMGLGSFLLSLPHFLSG 123 (633)
T ss_pred HHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHHHHHHHHhChHHhcC
Confidence 334456777777888899999999999999999999999999999999999 9999999999999999999988642110
Q ss_pred ----------------cCCCCCCCCCcc---------cccCCc--chhHHHHHHHHHHHHHhccccccchhhhhhccCCC
Q 008450 108 ----------------LRPRPCKETATH---------TCEQAS--GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE 160 (565)
Q Consensus 108 ----------------~~~~~~~~~~~~---------~~~~~~--~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~ 160 (565)
...+-|.++.+- .|++.+ ...+..++++|+++|+|.+...+...+++.|++|+
T Consensus 124 ~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~ 203 (633)
T TIGR00805 124 RYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS 203 (633)
T ss_pred CccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc
Confidence 001123211000 111111 12366788999999999999999999999999999
Q ss_pred CChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccc----------------------cchhhHHHHHHHHHHHHHHH
Q 008450 161 KDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEI----------------------SRSVGYGICSVAMFMAIIIF 218 (565)
Q Consensus 161 ~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~----------------------gw~~~f~i~~~~~~~~~~~~ 218 (565)
++ |+.++++++....+|.++|+++++++.+.+ +|+..|++.+++.++..+.+
T Consensus 204 ~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l 277 (633)
T TIGR00805 204 KN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPF 277 (633)
T ss_pred cc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99 999999999999999999999999887532 27778888777666554444
Q ss_pred Hhcc
Q 008450 219 LAGT 222 (565)
Q Consensus 219 ~~~~ 222 (565)
+...
T Consensus 278 ~~~p 281 (633)
T TIGR00805 278 FFFP 281 (633)
T ss_pred HhCc
Confidence 4443
No 104
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.70 E-value=2.6e-14 Score=151.32 Aligned_cols=171 Identities=13% Similarity=0.064 Sum_probs=112.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhH--HHHHHHHHHHHHhhh-HHHhhccccchhHHHHHHHHH-HHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANI--VTDFMGTSFLLCLLG-GFLADTFLGRYKTIAIFAAVQ-TLGTGM 98 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~~~~~~~~~-~~~~~~ 98 (565)
.++.+-+.+--..+.++.|++ +.|.+..++|.+ ........++.+|+. ++.+||+ ||||.+++.+.+. .+....
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~~~~~~~ 86 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLVSACLAS 86 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHHHHHHHH
Confidence 445555554555566777765 679999999997 456678887888887 6689998 9999876665332 222222
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
.+... +. ......+.....+.++..+...+...++..|..++++ ++...+....
T Consensus 87 ~~~~~--~~------------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~~ 140 (390)
T TIGR02718 87 LALVG--PD------------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQIA 140 (390)
T ss_pred HHcCC--cc------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHHH
Confidence 22110 10 0112233344444556666666666666667666665 7777777777
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 179 FISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
+..+|.++|+...+++.+.+|||..|++.+++.++..+..++.
T Consensus 141 g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 141 GVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 7788999998888899999999999999887766555554443
No 105
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.70 E-value=2.3e-15 Score=161.54 Aligned_cols=357 Identities=15% Similarity=0.130 Sum_probs=229.7
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhh----ccccchhHH-HHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLAD----TFLGRYKTI-AIFAAVQTLGTGML 99 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~-~~~~~~~~~~~~~~ 99 (565)
+...+.+.....++..|.++.+|+++...+.+.....+..++..|+.|+++| |+ ||||.. +++.++.+++..++
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ll 89 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFLL 89 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHHh
Confidence 4444555556678899999999999999999999999999999999999999 77 766554 46777777776666
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
.... |. +.........+.+..++..++.........+++.|..++.++ |.+..++-...
T Consensus 90 f~~~--p~--------------~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~ 148 (428)
T PF13347_consen 90 FSPP--PA--------------GLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIF 148 (428)
T ss_pred hccc--cc--------------hhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHH
Confidence 5430 10 000111334456777777999999999999999999986543 89999998888
Q ss_pred HHHHHHHHHHHHHHhcccc-------cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhcccc
Q 008450 180 ISLGTLMAVTVLVYIQDEI-------SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMD 252 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~~~-------gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (565)
..+|.++...+.+.+.+.. +|++...+.+++.++..++..+..++.+++.+++++.....
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~------------- 215 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKISLR------------- 215 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccccc-------------
Confidence 8888866655555544221 68888888777766666555554443111111100000000
Q ss_pred CCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcc
Q 008450 253 LPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQ 332 (565)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (565)
.. .+...+.|.+...+.........+.....
T Consensus 216 --------------------------------------------~~-----~~~~~~nr~~~~l~~~~~~~~~~~~~~~~ 246 (428)
T PF13347_consen 216 --------------------------------------------DS-----LRSLFRNRPFRILLLAFFLQWLAFALMNT 246 (428)
T ss_pred --------------------------------------------cc-----hhhhcccchHHHHHHHHHHHHhhhhhhhh
Confidence 00 00011112222222222222222222111
Q ss_pred cchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 008450 333 MITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAAL 412 (565)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~ 412 (565)
....+.......+ . ..+.+..+..+..++..++..++.+|+.+| +.+..+.++..++.+++.+
T Consensus 247 ~~~y~~~~vl~~~-~------~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~----------~~~~~~~~~~~~~~~~~~~ 309 (428)
T PF13347_consen 247 FLPYYFTYVLGNE-G------LISIFMLIFFVASIVGSPLWGRLSKRFGKK----------KVYIIGLLLAALGFLLLFF 309 (428)
T ss_pred HHHHHHHHHhcCc-h------hhHHHHHHHHHHHHHHHHHHHHHHHHccce----------eehhhhHHHHHHHHHHHHH
Confidence 1112222111111 1 123344556677777888888886666554 2367788888888877766
Q ss_pred HHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-------hhhHHHHHHHHHHHHHHHH
Q 008450 413 VERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK-------GMKTMSTGLFLTTLSLGFF 485 (565)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~gl~~~~~~lg~~ 485 (565)
.. ..+.+++.+..++.+++.+..++..+++..|..+. +..|...|++++...++..
T Consensus 310 ~~-----------------~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~ 372 (428)
T PF13347_consen 310 LG-----------------PGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQG 372 (428)
T ss_pred HH-----------------hhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHH
Confidence 52 24677888899999999999999999999998873 4579999999999999999
Q ss_pred HhhHHhhhhhhccc
Q 008450 486 VSSFLVAVVKKVTG 499 (565)
Q Consensus 486 ig~~l~~~l~~~~~ 499 (565)
+++.+.+.+....+
T Consensus 373 la~~i~g~~l~~~G 386 (428)
T PF13347_consen 373 LAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999998765543
No 106
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.67 E-value=4.1e-14 Score=152.60 Aligned_cols=150 Identities=15% Similarity=0.076 Sum_probs=125.6
Q ss_pred cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCC
Q 008450 45 TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA 124 (565)
Q Consensus 45 ~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 124 (565)
++|+...+.+++.++|.++++++.+++|+|.||+ .-.+.+....+...+-.++.+...
T Consensus 75 dl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~~--------------------- 132 (495)
T KOG2533|consen 75 DLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAVH--------------------- 132 (495)
T ss_pred ccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 4667778999999999999999999999999999 866766666666665555555553
Q ss_pred cchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh------cccc
Q 008450 125 SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI------QDEI 198 (565)
Q Consensus 125 ~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l------~~~~ 198 (565)
+++.+.+.|++.|+..++..|....+++.++.+++ |+..+++++...++|.++|.++...+ ....
T Consensus 133 ---s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~ 203 (495)
T KOG2533|consen 133 ---SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLA 203 (495)
T ss_pred ---hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcC
Confidence 37779999999999999999999999999999999 99999999999999999999888775 3457
Q ss_pred cchhhHHHHHHHHHHHHHHHHhccccc
Q 008450 199 SRSVGYGICSVAMFMAIIIFLAGTKRY 225 (565)
Q Consensus 199 gw~~~f~i~~~~~~~~~~~~~~~~~~~ 225 (565)
||||.|++.+++.+...++.++..|..
T Consensus 204 gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 204 GWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred CceeehhHHHHHHHHHHheEEEEecCC
Confidence 999999999988776666655555543
No 107
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.67 E-value=1.9e-14 Score=144.18 Aligned_cols=424 Identities=13% Similarity=0.074 Sum_probs=234.6
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
.+.....+.+.+-+...-|.+..|..++......+..+++..+|.++|++ |||+...+..+...+...+.+.+ |
T Consensus 91 ~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s---p-- 164 (528)
T KOG0253|consen 91 AMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS---P-- 164 (528)
T ss_pred HHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC---C--
Confidence 34444555566666667788999999999999999999999999999999 99999888777766666666555 3
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
++..+.+.|.+.|.|.|+ .|...++-.|..|..+ |....-.. ....+|.+..-
T Consensus 165 -------------------nf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ea 217 (528)
T KOG0253|consen 165 -------------------NFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVFEA 217 (528)
T ss_pred -------------------CeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHHHH
Confidence 377799999999999999 8999999999999998 88777666 77789998888
Q ss_pred HHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCcccc
Q 008450 189 TVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEAS 268 (565)
Q Consensus 189 ~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (565)
.+.-.+....||||..........+.....+.....-++.--++++.+ ....+....+-++.+.|--....+..|+-+
T Consensus 218 ~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k-AletL~kiArmNg~qlplgvl~~s~~~~~e- 295 (528)
T KOG0253|consen 218 LLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYK-ALETLHKIARMNGKQLPLGVLESSAIDRQE- 295 (528)
T ss_pred HHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHH-HHHHHHHHHHhcCCCCCcceeeeehhhhhh-
Confidence 777777788999998776664333332222222211112222333322 223333333434444443222222111100
Q ss_pred ccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhh---------
Q 008450 269 RIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVE--------- 339 (565)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 339 (565)
++..-+++...-.++ |.+..- .......-+|..+.....++.....+.....+.+-..+
T Consensus 296 -----~e~~~~~~~~~~a~k-----e~rg~~--~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~ 363 (528)
T KOG0253|consen 296 -----QEESDLDDSKSSAAK-----EVRGGT--TNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYN 363 (528)
T ss_pred -----hhhhchhhhhhcccc-----ccccch--HhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccch
Confidence 011111111110001 000000 00001112233222222222222111111111110000
Q ss_pred --hhhccccccc-ccccCcchhhhhhh-HHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 008450 340 --QATTMERSIG-RFQIPAGSLTVFFV-SAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVER 415 (565)
Q Consensus 340 --~~~~~~~~~~-~~~~~~~~~~~~~~-~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~ 415 (565)
.+...+.... ...........+.. ..-.-...+.+.++++++||. .|+..+++.++..+.+..-..
T Consensus 364 r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKk----------TMal~l~~f~iflfll~~c~~ 433 (528)
T KOG0253|consen 364 RFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKK----------TMALSLILFGIFLFLLTTCKT 433 (528)
T ss_pred hcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchh----------HHHHHHHHHHHHHHHHHHhcC
Confidence 0000111000 00000011111111 111111122344556667772 277777777776665543210
Q ss_pred HHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 416 KRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
......+++.+- +.....+...+.|..|..|+..|+++.|.....+.+|+++.|.+. +..
T Consensus 434 ---------------rn~~tvllf~ar----afisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~ 493 (528)
T KOG0253|consen 434 ---------------RNAYTVLLFTAR----AFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRA 493 (528)
T ss_pred ---------------cchhHHHHHHHH----HHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHh
Confidence 012222233333 333345677899999999999999999999999999999999887 332
Q ss_pred hcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCC
Q 008450 496 KVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKP 546 (565)
Q Consensus 496 ~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~ 546 (565)
+.+ ....-.+++++++++.+...++--|+|+|+.
T Consensus 494 e~s-----------------~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 494 ELS-----------------TSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred ccc-----------------eeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 211 1223467777777777777777777776653
No 108
>PTZ00207 hypothetical protein; Provisional
Probab=99.66 E-value=1.1e-13 Score=151.84 Aligned_cols=152 Identities=15% Similarity=0.071 Sum_probs=120.6
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
...+.+.+++|++..|.+++.+... ......+++|+++||+ |||+++.++.++..+|+++++++.+- .
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~~-~--------- 115 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQE-V--------- 115 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhcc-c---------
Confidence 4556778899999999999987643 4456777899999999 99999999999999999999886210 0
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHH-HHHHHHHhc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM-AVTVLVYIQ 195 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~l-g~~i~g~l~ 195 (565)
-..+++.+++.|++.|+|.+...+.....+.++|| ++ ||.+.++.....++|+++ +++..+++.
T Consensus 116 --------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~~~~~gLGsaI~~~l~~~l~~ 180 (591)
T PTZ00207 116 --------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIMKTFTGLGSAILGSIQLAFFS 180 (591)
T ss_pred --------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01248889999999999999998999999999997 45 999999999999999875 666666654
Q ss_pred ccccchhhHHHHHHHHHHHHHH
Q 008450 196 DEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 196 ~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
.+|+..|++.++..++..++
T Consensus 181 --~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 181 --DNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred --HhHHHHHHHHHHHHHHHHHH
Confidence 35777787776665544333
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.64 E-value=9.2e-14 Score=145.50 Aligned_cols=384 Identities=11% Similarity=0.078 Sum_probs=215.8
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHH--HHHHH-H
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL--GTGML-A 100 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~--~~~~~-a 100 (565)
.++.-+.+=...++.+.+++++.|++..|+|.+.++..+...+.+|+.|.++||. |.||-++..+.+..+ +-... .
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l~~pff~~v 94 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLLFGPFFIYV 94 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHTCHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344445568899999988999999999999999999999999999999999 866655443332221 22221 2
Q ss_pred HHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH
Q 008450 101 MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI 180 (565)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (565)
+. |-+ -.-+.++-++.++..+.......+.. |.+- +|..|+.+.=+|...+..
T Consensus 95 ~~---pll--------------------~~n~~lg~iig~i~l~~~f~~~~~~~-Ea~~---er~sr~~~feYG~~R~wG 147 (412)
T PF01306_consen 95 FG---PLL--------------------QSNFWLGAIIGGIYLGLVFNAGVPLS-EAYA---ERVSRRNGFEYGRARMWG 147 (412)
T ss_dssp HH---HHH--------------------HTT-HHHHHHTTTTTTTTTTTHHHHH-HHHH---HHHHHHHSS-HHHHHHHH
T ss_pred HH---HHH--------------------HHHHHHHHHHHHHHHHHHHcccchHH-HHHH---HHHHHHhcCCcchHHHHh
Confidence 22 110 00023333333444444333333333 2221 222333555567778889
Q ss_pred HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCcc
Q 008450 181 SLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGML 260 (565)
Q Consensus 181 ~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (565)
++|.+++..++|++.+ .+-+..||+.....++.+++.+..++..+++.+..+...
T Consensus 148 Sig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~------------------------ 202 (412)
T PF01306_consen 148 SIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALG------------------------ 202 (412)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSS------------------------
T ss_pred hHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccc------------------------
Confidence 9999999999999886 566788887665555444444444432211111100000
Q ss_pred ccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhh
Q 008450 261 YEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQ 340 (565)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (565)
...++.+..+. .+..++++.....+.+......+....+|++..+...
T Consensus 203 ----------~~~~~~~~~~~----------------------~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~ 250 (412)
T PF01306_consen 203 ----------AKKDKVSLKDV----------------------LSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASF 250 (412)
T ss_dssp ----------S------HHHH----------------------HHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------cCCCCCcHHHH----------------------HHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000000 0112233333322222223333333334433332211
Q ss_pred hhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008450 341 ATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSV 420 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~ 420 (565)
.+..-.+.. -.+.++++..+.-.+...+..+++.|++.| +.+.++..++.+-....++.
T Consensus 251 ---f~~~~~g~~-~~G~l~s~~v~~E~~~m~~~p~li~rig~k----------~~Lllag~i~~iRi~~~~~~------- 309 (412)
T PF01306_consen 251 ---FQSAGQGNQ-MYGYLWSVQVFLEALMMFFSPWLINRIGAK----------NLLLLAGVIMAIRIIGSGFA------- 309 (412)
T ss_dssp ---SSSHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HH----------HHHHHHHHHHHHHHHHHHT--------
T ss_pred ---hcccccChh-HHhHHHHHHHHHHHHHHHHHHHHHHhcChH----------hHHHHHHHHHHHHHHHHhhh-------
Confidence 211100000 122334444444445555555554444443 45777777788887777653
Q ss_pred hhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHH-HHHHHHHHHHhhHHhhhhhhccc
Q 008450 421 ARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLF-LTTLSLGFFVSSFLVAVVKKVTG 499 (565)
Q Consensus 421 ~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~-~~~~~lg~~ig~~l~~~l~~~~~ 499 (565)
.+++++.+...+.++-..+......-|+.+.+|++..++...+. ++..++|..+.+.+.|.+++..
T Consensus 310 ------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~- 376 (412)
T PF01306_consen 310 ------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI- 376 (412)
T ss_dssp -------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-
T ss_pred ------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-
Confidence 46677888999999999999999999999999999999998885 6778999999999999887532
Q ss_pred CCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 500 SKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 500 ~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
++...|++++++.+...++..+..++.
T Consensus 377 ---------------G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 377 ---------------GFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred ---------------CcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 245678888888877777766665443
No 110
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.64 E-value=8.6e-14 Score=140.19 Aligned_cols=365 Identities=16% Similarity=0.217 Sum_probs=243.3
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
+.+..|...- ....+.+-+++++|+|.+++|.+++.-.+...+.+++..+|+.|+ |..+.+..++++..+|.++=...
T Consensus 20 ia~NLR~~it-svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~ 97 (395)
T COG2807 20 IAFNLRPAIT-SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG 97 (395)
T ss_pred HHhccchhhh-hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc
Confidence 4444454433 345566778899999999999999999999999999999999999 99999999999999998876543
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
+...++.+-.+.|.|.+......++++.+.||++ .+..+++|.+..++
T Consensus 98 -------------------------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~ 145 (395)
T COG2807 98 -------------------------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGA 145 (395)
T ss_pred -------------------------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHH
Confidence 2567899999999999999999999999999887 58889999999999
Q ss_pred HHHHHHHHHHHhcccc-cchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccc
Q 008450 183 GTLMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLY 261 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (565)
|+++++.+...+.++. |||....+=+...++++++++....|. +.++..... .
T Consensus 146 ~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~--~~~~~~~~~-------------------~----- 199 (395)
T COG2807 146 GAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALRE--QAASIATKL-------------------V----- 199 (395)
T ss_pred HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccc--ccccccccc-------------------c-----
Confidence 9999999999888877 799999888888888877766643221 111100000 0
Q ss_pred cCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhh
Q 008450 262 EDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQA 341 (565)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (565)
+.++-| +++......+.+-.-+..++..+.+++..+..+.
T Consensus 200 --------------------------------~~~~vw--------~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G 239 (395)
T COG2807 200 --------------------------------SVRKVW--------RSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRG 239 (395)
T ss_pred --------------------------------cccccc--------cCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcC
Confidence 000011 1111121222233444555666666666554432
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~ 421 (565)
++.. ..+++.++..+..+....+...+ .+|.+ +.+.......+++.+++.-+.+.
T Consensus 240 --~sa~------~aG~llsl~~l~~~~~~ll~P~l----a~R~~-----n~r~~~~~~~~~~l~G~~G~~~~-------- 294 (395)
T COG2807 240 --LSAA------EAGSLLSLMQLAQLPTALLIPLL----ARRSK-----NQRPLVVLALLLMLVGLVGLLLA-------- 294 (395)
T ss_pred --CCHH------HhhhHHHHHHHHHHHHHHHHHHH----HHHhc-----ccchHHHHHHHHHHHHHHHHHHh--------
Confidence 2222 23444444444444444333334 33311 23344566666666666655443
Q ss_pred hhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-hhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccC
Q 008450 422 RAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK-GMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGS 500 (565)
Q Consensus 422 ~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~ 500 (565)
+.+.+++- .++.|+|.+..+|....++...+.+ +..++-+|+.+....+=.++||.+.|.+.+.++
T Consensus 295 ----------P~~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g- 361 (395)
T COG2807 295 ----------PGQLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG- 361 (395)
T ss_pred ----------hhhHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC-
Confidence 11211111 4889999999999988888777644 556677888888888888999999999876553
Q ss_pred CCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 501 KGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 501 ~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
+| ...+..++.+.++..+..+...|
T Consensus 362 ----sw----------~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 362 ----SW----------SAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred ----Ch----------HHHHHHHHHHHHHHHHHHhhcch
Confidence 44 34455555555555555444433
No 111
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.63 E-value=4.7e-14 Score=153.40 Aligned_cols=419 Identities=15% Similarity=0.089 Sum_probs=254.6
Q ss_pred hHHHHHHHhHHHHHH---HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVN---LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 99 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~---l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 99 (565)
..|...+..+|+... +-..+.++++-+..+++|+.++......+..|+.+.+.||+ |.|++.+.|.++..+|.++.
T Consensus 50 a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~g~~ls 128 (509)
T KOG2504|consen 50 ASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAALGLLLS 128 (509)
T ss_pred hHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHHHHHHH
Confidence 455555666665543 45667788999999999999999999999999999999999 99999999999999999999
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHH-HHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLY-IALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
+++++ .+.++ ..=++.|+|.|+.+......+..+|+.+ |+.+.++-..
T Consensus 129 sF~~~------------------------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia~~ 177 (509)
T KOG2504|consen 129 SFATS------------------------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIAVS 177 (509)
T ss_pred HHHhh------------------------HHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhhhc
Confidence 99955 44444 4455579999999999999999877544 8999999888
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcC
Q 008450 179 FISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVG 258 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (565)
+..+|.++=|.+.-++.+.+|||+.+++.+.+.+-........+|...++++.++ ++. ++.....+....
T Consensus 178 GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~--~~~--------~~~~~~~~~~~~ 247 (509)
T KOG2504|consen 178 GTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEE--KDL--------RNSAASVESTPK 247 (509)
T ss_pred cCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhh--hhh--------cccccccccccc
Confidence 8899988888999999999999999999887776666666665553333222200 000 000000000000
Q ss_pred ccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCc-c---ccchhhHhHhHHHhHHHHHHHHHHHHhhhcccc
Q 008450 259 MLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWK-L---CSVTSVEEVKMVARLLPIWATTIIFWTTYAQMI 334 (565)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (565)
. .+.+..+....+.. ......... .... +..+..+-+ . ...+..+++..+...+...+....+......+
T Consensus 248 ~-~~~~~~~~~~~~~~-~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l- 321 (509)
T KOG2504|consen 248 P-VELRISERDSGLKK-LSLSNLATL-KRGP--DKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYL- 321 (509)
T ss_pred c-cccccccCCCCCCc-ccccchhhh-hhCC--ccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 00000000000000 000000000 0000 000000000 0 01222333222222111111111111111111
Q ss_pred hhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008450 335 TFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVE 414 (565)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~ 414 (565)
..+.. ....+ ....+...++..+..+++-++.+.+.|+... +......++++..+++..+..+
T Consensus 322 ~~~~~-~~g~~------~~~aa~l~Siigi~~i~gRi~~G~laD~~~~--------~~~~~~~~~ll~~gl~~~~~p~-- 384 (509)
T KOG2504|consen 322 PSYAK-SLGLS------SNDAAFLLSIIGVSDIIGRIILGLLADKPGI--------RALVLFLLTLLIAGLARLFLPF-- 384 (509)
T ss_pred HHHHh-hcCCC------hhhhHHHHHHHHHhhhhhhhhhhhhcCcccc--------chHHHHHHHHHHHHHHHHHHHH--
Confidence 11111 11111 1123344555556666666666666443331 2233455666666666655444
Q ss_pred HHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 415 RKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
..++..++...++.|+..+...........+..+.+.-..+.|+..++..++..+|+.+.+.+
T Consensus 385 -----------------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~ 447 (509)
T KOG2504|consen 385 -----------------ATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLL 447 (509)
T ss_pred -----------------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceee
Confidence 234566777888888888888777778889999999999999999999999999999999977
Q ss_pred hhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhh
Q 008450 495 KKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICA 538 (565)
Q Consensus 495 ~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~ 538 (565)
.+.++ +|...|...+++.+++.+..+...
T Consensus 448 ~d~tg---------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 448 YDITG---------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eeccC---------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 64432 245567888888888877766665
No 112
>PRK11462 putative transporter; Provisional
Probab=99.63 E-value=1.9e-13 Score=148.04 Aligned_cols=175 Identities=12% Similarity=0.115 Sum_probs=124.0
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc---ccchhHHH-HHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTIA-IFAAVQTLGTGM 98 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~-~~~~~~~~~~~~ 98 (565)
-++...+.+..+..++..|.++.+|+++..+|.+....-+.-++.-|+.|+++||. +||||..+ ++.+..+++..+
T Consensus 17 g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~l 96 (460)
T PRK11462 17 GDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVL 96 (460)
T ss_pred chhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHH
Confidence 44455566666677899999999999999999999999999999999999999973 37765555 566777777665
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
+-.. |.. ........+++.-.+..++.........++.+|..++.+| |+++.++...
T Consensus 97 lf~~---p~~---------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~s~r~~ 153 (460)
T PRK11462 97 AYST---PDL---------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQSWRFV 153 (460)
T ss_pred HHhC---CCC---------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHHHHHHH
Confidence 5433 210 1112344455666667888888888888999999876553 9999999988
Q ss_pred HHHHHHHHHHHHHHHhccc-------ccchhhHHHHHHHHHHHHHHHHh
Q 008450 179 FISLGTLMAVTVLVYIQDE-------ISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~~-------~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
..++|..+++.+...+... .+|+....+.+++.+++..+.+.
T Consensus 154 ~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 154 LATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 8888887776665444332 25666666655554444434333
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.56 E-value=8.3e-12 Score=135.06 Aligned_cols=367 Identities=17% Similarity=0.115 Sum_probs=201.4
Q ss_pred hhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHH-HHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHH
Q 008450 53 SANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAI-FAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGV 131 (565)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (565)
.+...++..+..++..|+-|-++|+- |+||-++. ...+..+.+.++.+. + | .++..
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~-~~Rk~~l~~~~~~~~~~~~~l~~v-~-~--------------------~~~~~ 128 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYG-GRRKRFLLIFTLLGVLATALLWFV-S-P--------------------GQWWL 128 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHHh-C-c--------------------chHHH
Confidence 35667888899999999999999998 66655554 444555566666665 1 1 13444
Q ss_pred HHHHHHHHHHhccccccchhhhhhccCCCCChH--------------------hhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 132 LYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK--------------------EKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 132 l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~--------------------~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
..+.-++.-++.+......++++.|..++++.. +...|++..+.-+...++|.++..++.
T Consensus 129 ~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~ 208 (477)
T PF11700_consen 129 ALVLFIIANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLIS 208 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHH
Confidence 444444555677777788899999998877620 111128888888888888888876554
Q ss_pred HHhcc--------cccchhhHHHHHHHHHHHHHH-HHhcccccc-ccCCCCCc-hHHHHHHHHHHHHhccccCCCCcCcc
Q 008450 192 VYIQD--------EISRSVGYGICSVAMFMAIII-FLAGTKRYR-YKKSSGSP-IVHIFQVIVAAIKKRKMDLPCNVGML 260 (565)
Q Consensus 192 g~l~~--------~~gw~~~f~i~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (565)
-.+.. ..+.|..+.+.++-.++..+- ++..+++-+ +..|.+.. .....+.+...+|+
T Consensus 209 l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~------------ 276 (477)
T PF11700_consen 209 LLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKE------------ 276 (477)
T ss_pred HHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHH------------
Confidence 43321 123477777776654443333 333333211 11111111 11112222222211
Q ss_pred ccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhh
Q 008450 261 YEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQ 340 (565)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (565)
.++.|.+...+..+....-.......+...+..+
T Consensus 277 ----------------------------------------------~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~ 310 (477)
T PF11700_consen 277 ----------------------------------------------IRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATE 310 (477)
T ss_pred ----------------------------------------------HHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111222211111111111111111122222222
Q ss_pred hhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008450 341 ATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSV 420 (565)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~ 420 (565)
...++.. ....+..+..+..++...+++++.+++..|.+ +.+.++.++. ....+.+++.....
T Consensus 311 ~lg~s~~------~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~--------~~l~~~l~~~-~~i~~~g~~G~~~~-- 373 (477)
T PF11700_consen 311 VLGMSTT------QLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK--------RTLLISLILW-IIIPLYGLFGFWPS-- 373 (477)
T ss_pred hcCcCHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--------HHHHHHHHHH-HHHHHHHHHHhhhc--
Confidence 2222211 11223333445555555666666444444311 2222222222 22222222210000
Q ss_pred hhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccC
Q 008450 421 ARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGS 500 (565)
Q Consensus 421 ~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~ 500 (565)
.-| ..+.+.+.+..++.|+..+...+.+-++..++.|++..+...|++.+.....+.+||.+.+.+...+++
T Consensus 374 --~~g------~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~ 445 (477)
T PF11700_consen 374 --FFG------LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS 445 (477)
T ss_pred --ccC------cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 000 223444566677889999999999999999999999999999999999999999999999998765532
Q ss_pred CCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 501 KGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVW 540 (565)
Q Consensus 501 ~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~ 540 (565)
....+..+.++.++++++.+.+..+
T Consensus 446 ---------------~r~g~~~l~~lf~~gl~ll~~v~~~ 470 (477)
T PF11700_consen 446 ---------------QRYGFLFLLVLFLIGLILLFFVDVE 470 (477)
T ss_pred ---------------chhHHHHHHHHHHHHHHHHhhccch
Confidence 2344677777888887777666444
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.56 E-value=8.3e-12 Score=128.85 Aligned_cols=379 Identities=16% Similarity=0.196 Sum_probs=224.9
Q ss_pred hhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcccc-----ch-hHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 42 LVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-----RY-KTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 42 l~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr-~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
+..|++++..-.+.+++...+.+. .++..|+.+|+. + || +-+..+..++..+..+.+++.-+-.
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~-------- 75 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA-------- 75 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 456899998888888888777776 588999999998 7 66 4455567777777777766522111
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
+.-.-.+.+.........++.++.|+|.+....+..++++|..||++ |+++.++.+.+.-+|.+++.++.|.+.
T Consensus 76 ~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL 149 (403)
T PF03209_consen 76 ESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLL 149 (403)
T ss_pred ccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 00000122222344556677778999999999999999999999999 999999999999999999999999888
Q ss_pred ccccchhhHHH----HHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccccccC
Q 008450 196 DEISRSVGYGI----CSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEASRIH 271 (565)
Q Consensus 196 ~~~gw~~~f~i----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (565)
+.++..-..-+ ..+..++.++..+-..++.++..+..++
T Consensus 150 ~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~------------------------------------- 192 (403)
T PF03209_consen 150 DPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAER------------------------------------- 192 (403)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCC-------------------------------------
Confidence 87763322222 2222222233333333332221100000
Q ss_pred CCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhccccccccc
Q 008450 272 HTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRF 351 (565)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (565)
++..+.+...... . ..+-++++.. ++.....+++.-..+ -.|--+...++..
T Consensus 193 --~~~~f~~a~~~~~-~------------------~~~a~~f~~f--l~l~t~a~~~QD~iL-EPygg~Vfgmsv~---- 244 (403)
T PF03209_consen 193 --PRPPFREAWRQVW-A------------------SPQARRFFVF--LFLGTLAFFMQDVIL-EPYGGEVFGMSVG---- 244 (403)
T ss_pred --CCccHHHHHHHHH-h------------------CCChhHHHHH--HHHHHHHHHhhHHHc-CCchhHHcCCCHH----
Confidence 0001111100000 0 0011222211 222222222211111 1121111111111
Q ss_pred ccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCc
Q 008450 352 QIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATL 431 (565)
Q Consensus 352 ~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (565)
.+..++.......++...+.+++..| | .++.+.-.+|...+.+++..+.+...
T Consensus 245 --eTT~Lta~~~~G~L~G~~~~g~~l~~---~------~~~~~~a~~G~~~~~~~f~lii~a~~---------------- 297 (403)
T PF03209_consen 245 --ETTRLTAFWGGGTLLGMLLAGFLLSR---R------LGKKRTAALGCLLGALAFALIILAGP---------------- 297 (403)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhcC---C------CCchHHHHHHHHHHHHHHHHHHHHHh----------------
Confidence 12345555566666666666666432 2 22233456677777777776655422
Q ss_pred ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccc
Q 008450 432 PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNI 511 (565)
Q Consensus 432 ~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~ 511 (565)
..+.+.+....++.|++.+.......+...+..+++..|+.+|.+...+.++..++..+++.+.+.... +.+ +-
T Consensus 298 ~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~-----~~~-~~ 371 (403)
T PF03209_consen 298 LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA-----LFG-NS 371 (403)
T ss_pred cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcc-CC
Confidence 335667778999999999999999999999999999999999999999999999999998887654431 111 10
Q ss_pred ccchhhHHHHHHHHHHHHHHHHH
Q 008450 512 NRGRLDLFYGLLAILSIINLVIY 534 (565)
Q Consensus 512 ~~~~~~~~f~~~a~l~lv~~~~~ 534 (565)
....|...|.+=+++.++++.+.
T Consensus 372 ~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 372 PALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred cchHHHHHHHHHHHHHHHHHHHH
Confidence 11235555555555555555443
No 115
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.55 E-value=5.9e-14 Score=135.95 Aligned_cols=363 Identities=14% Similarity=0.234 Sum_probs=227.5
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
+..+...+.+.+.++..++.+.|..-..+.+.++||+.||.+|-|..-++-.....+|.+.++...-.+
T Consensus 66 lq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~----------- 134 (459)
T KOG4686|consen 66 LQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISH----------- 134 (459)
T ss_pred hhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHH-----------
Confidence 578888889999999999999999999999999999999988988766666667777888777652222
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE 197 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~ 197 (565)
.++.+..+|++.|+|.--...+.+.+...+|..++ .+.+++++.....+|..+-..+-+++.+.
T Consensus 135 ----------aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR~GstvNf~lm~~ly~~ 198 (459)
T KOG4686|consen 135 ----------AFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVARLGSTVNFLLMPFLYDT 198 (459)
T ss_pred ----------HHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHHhhceeeeeecHHHHHH
Confidence 48999999999999988888899999999999999 99999999988888887776666666654
Q ss_pred ccchh--------hH--HHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCccc
Q 008450 198 ISRSV--------GY--GICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPEA 267 (565)
Q Consensus 198 ~gw~~--------~f--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (565)
.+--. .. .+....+...++....... .++ ..+.+ +.
T Consensus 199 ~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg~--~D~-----rAeri------------lh--------------- 244 (459)
T KOG4686|consen 199 MGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLGL--SDD-----RAERI------------LH--------------- 244 (459)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhh-----HHHHH------------Hh---------------
Confidence 33100 00 1111122222222111100 000 00000 00
Q ss_pred cccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHH------HHHhhhcccchhhhhhh
Q 008450 268 SRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTI------IFWTTYAQMITFSVEQA 341 (565)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 341 (565)
.. ++..+ | ..+..+++.+. .+++...+ +.|.-+......+.
T Consensus 245 ----~e-------------~g~~G--e---------~pkLtdv~~f~--ppfw~~~iicv~yyva~fPFi~lg~~fF--- 291 (459)
T KOG4686|consen 245 ----LE-------------EGFLG--E---------EPKLTDVNTFY--PPFWVLVIICVLYYVAWFPFITLGPMFF--- 291 (459)
T ss_pred ----hh-------------cCccc--C---------CcccccccccC--ccHHHHHHHHHHHHHHHHHHhhhhHHHH---
Confidence 00 00000 0 00011111111 11111111 11112222222221
Q ss_pred hcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008450 342 TTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVA 421 (565)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~ 421 (565)
..+.+-.....+-+.+.-..+..+..|+++.++|+.+++... ++.+.+....+-..+.+..
T Consensus 292 ---~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~------- 352 (459)
T KOG4686|consen 292 ---QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTF------- 352 (459)
T ss_pred ---HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhh-------
Confidence 112221122333445555566778889999999998887542 5666666666666555432
Q ss_pred hhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCC
Q 008450 422 RAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSK 501 (565)
Q Consensus 422 ~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~ 501 (565)
.++ -.+..+.|....+.....|-.+...+|++.-|++-|..+...++|-++.+.+.+.+.+..+
T Consensus 353 -----------lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-- 416 (459)
T KOG4686|consen 353 -----------LSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-- 416 (459)
T ss_pred -----------ccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC--
Confidence 222 3456677888888888889999999999999999999999999999999999998754221
Q ss_pred CCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 502 GGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 502 ~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
++ .+...+|.....+++++..+.+.+-+
T Consensus 417 ---~y-------~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 417 ---SY-------DNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred ---ch-------hhHHHHHHHHHHHHHHHHHHHhheec
Confidence 11 22456666777777776666555533
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.49 E-value=2e-11 Score=129.34 Aligned_cols=358 Identities=15% Similarity=0.156 Sum_probs=223.0
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc---ccchh-HHHHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYK-TIAIFAAVQTLGTGML 99 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~~~ 99 (565)
.+...+.+.-+..++..|.++..|+++..+|.+...--+.=++.-|+.|.+.||. .||+| -++.+.+.+++.+.++
T Consensus 21 d~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~ 100 (467)
T COG2211 21 DFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLL 100 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHH
Confidence 3445567777888999999999999999999999999999999999999999974 26554 4555667788887777
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
-.+.. .+ ...+....++.-.+.+++.....-...++.++.-++.+| |.+..++-...
T Consensus 101 F~~p~----------------~~--~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R~~l~s~R~~~ 157 (467)
T COG2211 101 FITPD----------------FS--MTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----RASLTSWRMVF 157 (467)
T ss_pred HcCCC----------------cc--cCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----HHHHHHHHHHH
Confidence 66621 00 113455566777778899999988889999998876654 99999999988
Q ss_pred HHHHHHHHHHHHHHhcc-------cccchhhHHHHHHHHHHHHHHHHhccccccc-cCCCCCchHHHHHHHHHHHHhccc
Q 008450 180 ISLGTLMAVTVLVYIQD-------EISRSVGYGICSVAMFMAIIIFLAGTKRYRY-KKSSGSPIVHIFQVIVAAIKKRKM 251 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~-------~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 251 (565)
.++|.++...+.+.+.. ..||+..-++.+++..+.++..++..++... ..+..+...
T Consensus 158 ~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~--------------- 222 (467)
T COG2211 158 ASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK--------------- 222 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc---------------
Confidence 88887766555554432 3467766666666655555554444332211 111100000
Q ss_pred cCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhc
Q 008450 252 DLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYA 331 (565)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (565)
.++.+.. ......|.+...+...+ +.+...+
T Consensus 223 ------------------------~~~~~~~----------------------~~~~~Nrp~~~~l~~~l---~~~~~~~ 253 (467)
T COG2211 223 ------------------------LKLKDSF----------------------LLIFKNRPLLLLLLMNL---LLFIAFN 253 (467)
T ss_pred ------------------------ccHHHHH----------------------HHHHccchHHHHHHHHH---HHHHHHH
Confidence 0000000 00112222222222222 2222222
Q ss_pred ccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHH
Q 008450 332 QMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAA 411 (565)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~ 411 (565)
...+.+.+. ....++.....+...........++..+++.++..++.+| +.+.+|.++..++.+.+.
T Consensus 254 i~~s~~~yy---~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk----------~~~~~~~~~~~i~~~~~~ 320 (467)
T COG2211 254 IRGSIMVYY---VTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK----------KLFLIGLLLLAVGYLLLY 320 (467)
T ss_pred HHhhhhhee---EEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH----------HHHHHHHHHHHHHHHHHH
Confidence 222221111 1111111111122233333444444456666664444443 457788888888887776
Q ss_pred HHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-------hhhHHHHHHHHHHHHHHH
Q 008450 412 LVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK-------GMKTMSTGLFLTTLSLGF 484 (565)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~-------~~rg~~~gl~~~~~~lg~ 484 (565)
+.. ..+..++++..++.++|.+...+..++++.|.+.- +..|...|.+.+..=+|.
T Consensus 321 f~~-----------------~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ 383 (467)
T COG2211 321 FTP-----------------AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGL 383 (467)
T ss_pred hhc-----------------CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 641 23566667777899999999999999999988643 567888999999999999
Q ss_pred HHhhHHhhhhhhcc
Q 008450 485 FVSSFLVAVVKKVT 498 (565)
Q Consensus 485 ~ig~~l~~~l~~~~ 498 (565)
+++..+.+++....
T Consensus 384 ala~~~~g~~L~~~ 397 (467)
T COG2211 384 ALAGFIPGWILGAI 397 (467)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999888876543
No 117
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.35 E-value=3.1e-12 Score=113.41 Aligned_cols=135 Identities=18% Similarity=0.245 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHH
Q 008450 56 IVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIA 135 (565)
Q Consensus 56 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~ 135 (565)
+.+.+.++..++.++.|+++||+ |||+.+..+..+..++.++..... +.+.+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~ 57 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALSS------------------------NITVLIIA 57 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHhc------------------------cHHHHHHH
Confidence 44567788999999999999999 999999999888888887777652 26778889
Q ss_pred HHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Q 008450 136 LYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 136 r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~ 215 (565)
+++.|++.+...+....++.|.+|+++ |++..++.+...++|..+++.+.+++.+..+|++.|++.++..+++.
T Consensus 58 ~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 58 RFLQGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 99999999999999999999999999998999999998877666655
Q ss_pred HHHHhc
Q 008450 216 IIFLAG 221 (565)
Q Consensus 216 ~~~~~~ 221 (565)
+.....
T Consensus 132 ~~~~~~ 137 (141)
T TIGR00880 132 ILLAFL 137 (141)
T ss_pred HHHhhc
Confidence 554443
No 118
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.35 E-value=6.1e-10 Score=114.96 Aligned_cols=131 Identities=16% Similarity=0.060 Sum_probs=97.5
Q ss_pred HHHHHHHHHhhhcCCC---Cc----hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 33 GIAVNLVTYLVGTMHL---PS----ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~---s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
.+...+++|+++..+- ++ +-.+...++..+..++.+|+-|.++|+.+-||+.+.+...+..+.+.++.++.+
T Consensus 33 vtt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~- 111 (438)
T COG2270 33 VTTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPP- 111 (438)
T ss_pred eeeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCC-
Confidence 3455688888886544 22 344566677788899999999999999944555666666666667777777621
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
+.+++...+...+..++.........+++.|..++++ .++..++-+....+|..
T Consensus 112 --------------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~ 165 (438)
T COG2270 112 --------------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSV 165 (438)
T ss_pred --------------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccch
Confidence 1346777778888899999999999999999999888 78888887777778776
Q ss_pred HHHHH
Q 008450 186 MAVTV 190 (565)
Q Consensus 186 lg~~i 190 (565)
+..++
T Consensus 166 i~li~ 170 (438)
T COG2270 166 ILLIF 170 (438)
T ss_pred HHHHH
Confidence 65444
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.33 E-value=1.4e-11 Score=133.84 Aligned_cols=167 Identities=14% Similarity=0.075 Sum_probs=125.7
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
+|....+++...+++.|+++.+|++..+.++..+.+.++..++.+++|+++||+ |||+.+........++..+..+..
T Consensus 268 ~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~~~~~~~~~~- 345 (467)
T PRK09556 268 IFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALIIFTLGVYQH- 345 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHHHHHHHHHHh-
Confidence 444455667778899999999999999999999999999999999999999999 998877665544444333222221
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH-H
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL-G 183 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g 183 (565)
. .+...+.+.+++.|++..+..........|.+|++. |+.+.++.+...++ |
T Consensus 346 -~--------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~g~l~g 398 (467)
T PRK09556 346 -A--------------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTFAYLFG 398 (467)
T ss_pred -c--------------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHHHHHHh
Confidence 0 124456677777776544333333456679999988 99999999999886 7
Q ss_pred HHHHHHHHHHhcc------------cccchhhHHHHHHHHHHHHHHHHh
Q 008450 184 TLMAVTVLVYIQD------------EISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 184 ~~lg~~i~g~l~~------------~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.+++|.+.|++.+ ..+|+..|++.+++.+++.+..+.
T Consensus 399 ~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 399 DSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999999 678999999887776666555443
No 120
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.32 E-value=2.3e-11 Score=128.92 Aligned_cols=163 Identities=13% Similarity=0.085 Sum_probs=132.2
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~ 107 (565)
.+++.....+++.|+. +.|. .+.++..+.+.++..++.++.|++.||+ ||||.+..+..+..++..+.++.+
T Consensus 229 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~---- 300 (399)
T PRK05122 229 SIGFGTIATFITLYYA-ARGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLAP---- 300 (399)
T ss_pred HHHHHHHHHHHHHHHH-Hccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHhc----
Confidence 3455556667777775 4465 3456777888889999999999999999 999999988888888777766652
Q ss_pred cCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHH
Q 008450 108 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMA 187 (565)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg 187 (565)
+.+.+.+.+++.|++.+...+.......|..|+++ |+++.++++...++|..++
T Consensus 301 --------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 301 --------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGIT 354 (399)
T ss_pred --------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 25567788899999999888888888889888887 9999999999999999999
Q ss_pred HHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcccc
Q 008450 188 VTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKR 224 (565)
Q Consensus 188 ~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 224 (565)
+.+.|++.+..||++.|++.+++.++++++.+...++
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999888777776666555443
No 121
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.32 E-value=5.3e-11 Score=130.12 Aligned_cols=167 Identities=12% Similarity=0.128 Sum_probs=124.9
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+....+|++..+++.|+++.+|++..+.++......++..++.+++|+++||+ |||+++.++.+...++.+.+.....
T Consensus 261 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~~~~~~~~~~~~- 338 (490)
T PRK10642 261 ATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALFVLAIPAFILIN- 338 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 34466788888999999888999988888888888899999999999999999 9999988877654444333222101
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
. .+...+++++++.|++.+...+....++.+.+|++. |+++.++.+....++..
T Consensus 339 -~-------------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~~~~~~~g~ 392 (490)
T PRK10642 339 -S-------------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAFNISVLVAG 392 (490)
T ss_pred -C-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHHHHHHHHHH
Confidence 0 125567788888888877777778888899999999 99999986555666677
Q ss_pred HHHHHHHHhcccc-cchhhHHHHHHHHHHHHHHHHh
Q 008450 186 MAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 186 lg~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
++|.+.+++.+.. +|+.++++..+..+++++..++
T Consensus 393 ~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 393 LTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 8899999887754 4676666555554444444444
No 122
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.31 E-value=4e-11 Score=127.24 Aligned_cols=160 Identities=13% Similarity=0.129 Sum_probs=125.9
Q ss_pred HhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008450 30 STMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 109 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~ 109 (565)
.++....+++.|+++++|++..+.+++.+...+...++.+++|+++||+ |||+.+..+.....+........+
T Consensus 231 ~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------ 303 (393)
T PRK15011 231 TNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAGVCFYAGMLMAH------ 303 (393)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHh------
Confidence 3344446788899999999999999998888888888999999999999 999988776655544433333331
Q ss_pred CCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHH
Q 008450 110 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 189 (565)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~ 189 (565)
+...+.+.+++.+++.|...+....+..|.+|+ + |+++.++++...++|..+|+.
T Consensus 304 ------------------~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~~~~~lg~~~g~~ 358 (393)
T PRK15011 304 ------------------SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYTNTSRVGWIIAGS 358 (393)
T ss_pred ------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHHHHHHHHHHHHHH
Confidence 255567788888777777767777888888874 4 788999998889999999999
Q ss_pred HHHHhcccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 190 VLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 190 i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
++|++.+..||+..|++.+++.+++++..+..
T Consensus 359 l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 359 LAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999998999999998877777666665543
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.30 E-value=3.1e-11 Score=129.26 Aligned_cols=163 Identities=12% Similarity=0.075 Sum_probs=129.3
Q ss_pred HHHHHHHHHhhhcCCCC--------chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 33 GIAVNLVTYLVGTMHLP--------SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
....+++.|+. +.|.+ ..+.+.+.+...+...++.++.|+++||+ |||+++.++.++..++..+......
T Consensus 226 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~~~~~~v~~~l~~~~~~ 303 (418)
T TIGR00889 226 ITNIFGNGFLH-EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLSLVAWALRFGFFAYGDP 303 (418)
T ss_pred HHHHhHHHHHH-HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCc
Confidence 34455566765 44543 36678999999999999999999999999 9999999999988888766665311
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh-HHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF-FFISLG 183 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~lg 183 (565)
+ ....+.+++.+++.|++.+...+....++.|.+|+++ |++++++.+ ...++|
T Consensus 304 --~------------------~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~~g~~~~~~~~lg 357 (418)
T TIGR00889 304 --E------------------YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASAQGLFTLMCNGFG 357 (418)
T ss_pred --c------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHhhH
Confidence 0 0124667788999999999988999999999999998 999999997 567899
Q ss_pred HHHHHHHHHHhccc------ccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 184 TLMAVTVLVYIQDE------ISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 184 ~~lg~~i~g~l~~~------~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
.++||+++|++.+. .||+.+|.+.+++.+++.++.++..+
T Consensus 358 ~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 358 SLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999887 46999999887776666555555444
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.29 E-value=2.9e-11 Score=125.92 Aligned_cols=154 Identities=14% Similarity=0.107 Sum_probs=128.1
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
.......++|. +++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..++.++..+.++
T Consensus 222 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~------- 292 (377)
T TIGR00890 222 LLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAVGMAAMLFIPM------- 292 (377)
T ss_pred HHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHHHHHHHHHccc-------
Confidence 33444555664 57899999999999999999999999999999999 9999999998888888777766521
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
.....+++..++.+++.+...+..+.++.|.+|+++ |++++++++...++|..++|.+.
T Consensus 293 ---------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~~~~~~~ 351 (377)
T TIGR00890 293 ---------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTAKAVAGIFGGLIA 351 (377)
T ss_pred ---------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHHHHHHHHHHHHHH
Confidence 112335566778888888888888899999999998 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHH
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~ 215 (565)
|++.+..||++.|.+.+++.++++
T Consensus 352 g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 352 SHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999998877666543
No 125
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.29 E-value=4.2e-10 Score=115.62 Aligned_cols=83 Identities=16% Similarity=-0.006 Sum_probs=70.9
Q ss_pred hhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc---------
Q 008450 127 FQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE--------- 197 (565)
Q Consensus 127 ~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~--------- 197 (565)
.++..++++.++.|.|.+...++.++++++..++++ +.+.+++.+....+|.++||.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 358889999999999999999999999999999888 88899999999999999999999977631
Q ss_pred -------ccchhhHHHHHHHHHHHH
Q 008450 198 -------ISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 198 -------~gw~~~f~i~~~~~~~~~ 215 (565)
.+|+++|++.+.+.++..
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~ 106 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLA 106 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 479999986655544333
No 126
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.28 E-value=5.8e-11 Score=122.14 Aligned_cols=166 Identities=22% Similarity=0.267 Sum_probs=146.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchh-HHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYK-TIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~~~~~~a~ 101 (565)
..++...........++.++.+.+|.+..+.+++.+...++..++.++.|+++||+ |||+ .+.++..+..++.++...
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 183 AFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHHH
Confidence 34556666777778888888877899999999999999999999999999999999 9999 999999999988888877
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
.. +...+.+..++.|++.+...+....++.|..|+++ |++.++......+
T Consensus 262 ~~------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 311 (352)
T cd06174 262 AP------------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNTFGS 311 (352)
T ss_pred hc------------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHHHHH
Confidence 62 26678889999999999999999999999999988 9999999999999
Q ss_pred HHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Q 008450 182 LGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
+|..+++.+.+++.+..+|+..|.+.+++.+++.+..+
T Consensus 312 ~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 312 LGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 99999999999999989999999998887776655543
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.27 E-value=1.1e-10 Score=123.99 Aligned_cols=158 Identities=16% Similarity=0.059 Sum_probs=126.7
Q ss_pred HHHHHHHHHhhhcCCCCc---hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008450 33 GIAVNLVTYLVGTMHLPS---ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 109 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~---~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~ 109 (565)
.+.+.++.|+.+..+... ...+.+.+.+.++..++.++.|+++||+ |||+++..+..+..++.+...+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~------ 309 (408)
T PRK09874 237 SIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMSFVQ------ 309 (408)
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHHHhc------
Confidence 344556777765433222 1245566667788889999999999999 999999998887777766665542
Q ss_pred CCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHH
Q 008450 110 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 189 (565)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~ 189 (565)
+.+.+++.+++.|++.+...|...+++.+..|+++ +++.++++....++|..+||.
T Consensus 310 ------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~~gp~ 365 (408)
T PRK09874 310 ------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDIGNVTGPL 365 (408)
T ss_pred ------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHHHHHhhHH
Confidence 25667888999999999999999999999888888 999999999999999999999
Q ss_pred HHHHhcccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 190 VLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 190 i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
++|++.+..||++.|++.+++.+++.+..+..
T Consensus 366 ~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 366 MGAAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888777766655443
No 128
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.26 E-value=3.7e-10 Score=117.12 Aligned_cols=391 Identities=11% Similarity=0.030 Sum_probs=221.3
Q ss_pred HHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 35 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 35 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
.+...+|.++-+| +...+.|+..+|++.+.....++-|+.|++ |=|...+++.++..+|+.+=..+. .|.+.
T Consensus 64 ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~iGa~Ir~iss-~p~v~----- 135 (480)
T KOG2563|consen 64 YAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGIGAWIRLISS-LPFVP----- 135 (480)
T ss_pred ehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHHHHHHhhhcc-Ccccc-----
Confidence 3456777777888 777788999999999999999999999999 999999999999999988876662 24321
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
+..-....+.+..+.+...-.+.....-..+-||++++ |..+..+-.+++.+|.++|.++...+
T Consensus 136 ----------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 136 ----------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred ----------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHHHhcchHHHHHHhhcccee
Confidence 11112367788888887777776666677788999999 99999998888889999998887777
Q ss_pred cccc------cchh--hHHHHHHHHHHHHHHHHhccccccccCCCCCchHHHHHHHHHHHHhccccCCCCcCccccCCcc
Q 008450 195 QDEI------SRSV--GYGICSVAMFMAIIIFLAGTKRYRYKKSSGSPIVHIFQVIVAAIKKRKMDLPCNVGMLYEDTPE 266 (565)
Q Consensus 195 ~~~~------gw~~--~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (565)
..+. +|.. .|+...+...+.+.+..+..++.++.||..+...+
T Consensus 200 V~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~----------------------------- 250 (480)
T KOG2563|consen 200 VPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL----------------------------- 250 (480)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh-----------------------------
Confidence 6543 3543 34433333333333333333322222332110000
Q ss_pred ccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHHHHHHHhhhcccchhhhhhhhcccc
Q 008450 267 ASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWATTIIFWTTYAQMITFSVEQATTMER 346 (565)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (565)
+ +.++.... ....+++..+...........+++..+..+...+.. .+.+
T Consensus 251 -~------~~~f~~si---------------------~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~--sgY~- 299 (480)
T KOG2563|consen 251 -Q------DASFPKSI---------------------KSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP--SGYE- 299 (480)
T ss_pred -h------cCcHHHHH---------------------HHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc--ccCC-
Confidence 0 00000000 011122222222222212222222221111100000 0011
Q ss_pred cccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 008450 347 SIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGL 426 (565)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~ 426 (565)
+...+....+..+..++...+.+.+.|| .++ .+. .+.+-+....++...+......
T Consensus 300 -----~~~aG~ig~l~iv~Gmlga~~~gii~Dk----tk~---fk~--~~~v~~~~~~v~~~~l~~~t~~---------- 355 (480)
T KOG2563|consen 300 -----GVFAGYIGALMIVAGMLGALASGIIADK----TKK---FKL--TTLVLYLFALVGTLMLLTCTLF---------- 355 (480)
T ss_pred -----ccccchhHHHHHHHHHHHHHHHHhhhhh----hhh---HHH--HHHHHHHHHHHHHHHHHHhhcc----------
Confidence 1234555666666666666666666553 221 112 2223333333332221111110
Q ss_pred CCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCc
Q 008450 427 TTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGW 506 (565)
Q Consensus 427 ~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w 506 (565)
.-..+++.....+.|..+....|...++..|..-+...++.+|+.++..++-+.+-..+.+...+ +.+..+|
T Consensus 356 -----~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~---~~~~~~~ 427 (480)
T KOG2563|consen 356 -----LGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAE---DLGPPGN 427 (480)
T ss_pred -----CCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhh---ccCCCCC
Confidence 23344555666777788888889999999999988899999999998777666555555444432 1111222
Q ss_pred cccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCCCccch
Q 008450 507 LADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKKPKAGI 550 (565)
Q Consensus 507 ~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~~~~~~ 550 (565)
. ...-+.+...+++.+.+..+..+++++.+.+++.
T Consensus 428 ~---------~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e~~~ 462 (480)
T KOG2563|consen 428 T---------FPANIFLTVSALLGAILVAFFRPDYRRLRAEAGN 462 (480)
T ss_pred C---------ccchhHhHHHHHHHHHHHhhhhhhHHhHhhhhcc
Confidence 1 1112444555555555666666666655554443
No 129
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.24 E-value=1.2e-10 Score=121.81 Aligned_cols=157 Identities=17% Similarity=0.151 Sum_probs=126.2
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
......++.|+.+++|.++.+.+++.+.......++.+++|+++||+ |||+++.++.+...+...+....+
T Consensus 216 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 286 (375)
T TIGR00899 216 ILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFYTGLAADN-------- 286 (375)
T ss_pred HHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHH--------
Confidence 33445678888889999999999988888777888899999999999 999998887766555444443331
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
+.+.+.+.+++.|++.|...+....+..|..|+ + +++++++++...++|..++|.++
T Consensus 287 ----------------~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~~g~~~~ 343 (375)
T TIGR00899 287 ----------------SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGRVGWIIAGSVG 343 (375)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 255677788888998888888888888898875 3 66899999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
|++.+..||+..|++.+++.+++.++...
T Consensus 344 g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 344 GILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 99999999999999888777766655443
No 130
>PRK03545 putative arabinose transporter; Provisional
Probab=99.24 E-value=2.4e-10 Score=120.96 Aligned_cols=165 Identities=8% Similarity=-0.058 Sum_probs=129.2
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHH-HHHhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML-AMVTK 104 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~-a~~~~ 104 (565)
+.....++...++++|+.+.+|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+ .+..+..++..+. ...
T Consensus 216 ~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~~~l~~~~-- 291 (390)
T PRK03545 216 VVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCLLLLLPAA-- 291 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHHHHHHHHh--
Confidence 33344555666778888888999999999999999999999999999999998 887654 4444444443333 222
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+ +.+.+.+..++.|++.+...+.....+.+..| ++ |+++++++....++|.
T Consensus 292 -~---------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~ 342 (390)
T PRK03545 292 -N---------------------SEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIFNIGI 342 (390)
T ss_pred -c---------------------hHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHHHHHH
Confidence 1 25667778888899988887888888888766 45 8899999999999999
Q ss_pred HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 185 LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
.+||.++|++.++.|++..|++.+++.+++++......+
T Consensus 343 ~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 343 GAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999999999999999988887777666555443
No 131
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.23 E-value=1.2e-10 Score=123.01 Aligned_cols=154 Identities=14% Similarity=0.219 Sum_probs=123.4
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
....+++.|++ +.|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+..+..++.++.. .
T Consensus 218 ~~~~~lp~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~---------- 284 (381)
T PRK03633 218 SLYGLMPLYLN-HQGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S---------- 284 (381)
T ss_pred HHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h----------
Confidence 34456777876 4699999999999999999999999999999999 999999888887777655442 1
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
.......+++.|++.+...|...+...|..|+++ ++...+.+....++|.++||.++|
T Consensus 285 ----------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp~~~G 342 (381)
T PRK03633 285 ----------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGPSFTA 342 (381)
T ss_pred ----------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123346677787777788999999999888876 777777777888999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
++.++++|++.|.+.+.+.+++.+..+..
T Consensus 343 ~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 343 MLMQNYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHhCccHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998877766665554444
No 132
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.23 E-value=1.6e-10 Score=123.65 Aligned_cols=154 Identities=15% Similarity=0.093 Sum_probs=126.4
Q ss_pred HHHHHHhhhc---CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 36 VNLVTYLVGT---MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 36 ~~l~~yl~~~---l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
..++.|+.+. .+.+..+.+.+.+...++..++.+++|+++||+ |||+.+.++.++..++..+.+++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~~~~~l~~~~~~-------- 314 (420)
T PRK09528 244 QQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMAVRIIGSGFATG-------- 314 (420)
T ss_pred HHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHHHHHHHHHhccc--------
Confidence 3466666543 356667889999999999999999999999999 9999999998888888888776622
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeeh-hhHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR-FFFFISLGTLMAVTVL 191 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~lg~~lg~~i~ 191 (565)
++.+.+.+++.|++.+...+....++.|.+|++. ++...+. ++...++|.++++.+.
T Consensus 315 ----------------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~~~~~~lg~~ig~~~~ 372 (420)
T PRK09528 315 ----------------PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGFQFAKQLGAVFLSTLA 372 (420)
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehHHHHHHHHHHHHHHHH
Confidence 5667788999999988888888899999999887 8888766 6677889999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
|++.+..||+..|.+.+++.++..++.++
T Consensus 373 G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 401 (420)
T PRK09528 373 GNLYDSIGFQGTYLILGGIVLLFTLISVF 401 (420)
T ss_pred HHHHHhhCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999877766555444443
No 133
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.22 E-value=2e-10 Score=120.39 Aligned_cols=162 Identities=15% Similarity=0.100 Sum_probs=125.4
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHH-HHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG-MLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~a~ 101 (565)
..++....++.+..+++.|+++++|.+..+.+.+.....++..++.+++|+++||+ |||+.+..+..+..+... +...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~ 305 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALLAVPLLMA 305 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666778899999888999999999999999999999999999999999 999988765554444332 2211
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh-HHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF-FFI 180 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~ 180 (565)
... . .+.+.+.+..++.|++.+...+...+++.|.+|+++ |+++.+..+ ...
T Consensus 306 ~~~--~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~ 358 (394)
T TIGR00883 306 LLD--S-------------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYNLAG 358 (394)
T ss_pred Hhc--C-------------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhHhHH
Confidence 100 0 125566777888899988899999999999999998 999999854 455
Q ss_pred HHHHHHHHHHHHHhccccc-chhhHHHHHHHHH
Q 008450 181 SLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMF 212 (565)
Q Consensus 181 ~lg~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~ 212 (565)
.+|..++|.++|++.+..| |++.++...++.+
T Consensus 359 ~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 359 AIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 6899999999999999888 8877776554433
No 134
>PRK03699 putative transporter; Provisional
Probab=99.22 E-value=9.7e-11 Score=124.26 Aligned_cols=162 Identities=10% Similarity=0.134 Sum_probs=127.9
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
.++.....+++..+++.|+++.+|++..+.+++.+.+.++..++.+++|+++||+ +||+++.....+..+...+....+
T Consensus 214 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~~~~ 292 (394)
T PRK03699 214 ALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALVLMYLFVNTD 292 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHHHHHHHHHcC
Confidence 3444456677788999999989999999999999999999999999999999999 999998877766665544444331
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
+...+.+..++.|++.++..+...++..+..|++ +++..+......++|
T Consensus 293 ------------------------~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~g 341 (394)
T PRK03699 293 ------------------------DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNFILTCGTIG 341 (394)
T ss_pred ------------------------CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHHHHHhhhHH
Confidence 1344556677888888888888888888876644 445567777788899
Q ss_pred HHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Q 008450 184 TLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 184 ~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
..++|.+.|++.+..||+..+++.+++.++++++
T Consensus 342 ~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~ 375 (394)
T PRK03699 342 TMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHH
Confidence 9999999999999999999998877666655443
No 135
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.22 E-value=2.1e-10 Score=125.22 Aligned_cols=149 Identities=19% Similarity=0.154 Sum_probs=117.2
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
....+++.|+++++|++..+.+++.+.+.++..++.+++|+++||+ |||+++.++.++..++.++.....+
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~-------- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAIGG-------- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhccc--------
Confidence 3557789999889999999999999999999999999999999999 9999988877666655544333211
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
...+.+.+..++.+....+..+..++++.|.+|+++ |++++++++...++|..+||.++|
T Consensus 364 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 364 --------------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred --------------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHH
Confidence 123334444444443333445677889999999888 999999999999999999999999
Q ss_pred HhcccccchhhHHHHHHH
Q 008450 193 YIQDEISRSVGYGICSVA 210 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~ 210 (565)
++.+.+||+..+.+.+..
T Consensus 424 ~l~~~~g~~~~~~~~~~~ 441 (496)
T PRK03893 424 LIAQRLDLGTALASLSFS 441 (496)
T ss_pred HHhccCChHHHHHHHHHH
Confidence 999999999888655433
No 136
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.20 E-value=3.1e-10 Score=120.49 Aligned_cols=167 Identities=13% Similarity=-0.009 Sum_probs=131.5
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
.++....++++..++++|+.+ +|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+.++..+..++.++....
T Consensus 214 ~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~~~~~~~~- 290 (393)
T PRK09705 214 FGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVGFCGFIWL- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHHHHHHHHc-
Confidence 334556777888889999975 899999999999999999999999999999998 99999999887777776655433
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCC-CChHhhhhhcceeehhhHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~~l 182 (565)
|. +...+ ..++.|++.+...|.......+.+++ ++ +++.+++.+...++
T Consensus 291 --~~--------------------~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~ 340 (393)
T PRK09705 291 --PL--------------------QLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFMQGIGFI 340 (393)
T ss_pred --cc--------------------hHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHHHHHHHH
Confidence 11 11112 22456888888888887777888764 44 89999999999999
Q ss_pred HHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHhccc
Q 008450 183 GTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
+..+||.+.|++.+..| |...|.+.+++.++++.+.....+
T Consensus 341 ~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 341 IAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999876 888888877776666655555444
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.20 E-value=3e-10 Score=120.66 Aligned_cols=160 Identities=15% Similarity=0.034 Sum_probs=125.3
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
..++....+++.|+. +.|++..+.+.+.+.+.++..++.++.|+++||+ |||+.+..+.+...++.++.....
T Consensus 234 ~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~----- 306 (406)
T PRK11551 234 IVLYFLLNWLPSLLV-GQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLAALAAAP----- 306 (406)
T ss_pred HHHHHHHHHHHHHHH-hCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 345555666777776 5799999999999999999999999999999999 999998887666666655554431
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
+.+.+.+..++.|++.++..+...++..|.+|+++ |++..++.+....+|..+||
T Consensus 307 -------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~ 361 (406)
T PRK11551 307 -------------------SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRLGSMAGP 361 (406)
T ss_pred -------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhHHHHHHh
Confidence 14456666777888888888889999999999998 99999999999999999999
Q ss_pred HHHHHhcccc-cchhhHHHHHHHHHHHHHHHHh
Q 008450 189 TVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 189 ~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.++|++.+.. +|...+++...+.+++.++.+.
T Consensus 362 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 362 LLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 9999998865 4555666555555544444433
No 138
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.20 E-value=2e-10 Score=130.06 Aligned_cols=133 Identities=11% Similarity=0.048 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHH
Q 008450 57 VTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIAL 136 (565)
Q Consensus 57 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r 136 (565)
.....++.+++.+++|+++||+ |||+++.+++++.++++++.+++.+ ...+++.+
T Consensus 601 ~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~~s------------------------~~~ll~~~ 655 (742)
T TIGR01299 601 NFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFGNS------------------------ESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHcc------------------------HHHHHHHH
Confidence 4455688899999999999999 9999999999999988888877632 44567777
Q ss_pred HHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Q 008450 137 YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAII 216 (565)
Q Consensus 137 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 216 (565)
++.+++.++..+...++++|++|.+. |++++++.+....+|.++||++++++.. .+...+|++.+++.+++.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~-~~~~~pf~i~a~~lll~~l 728 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVG-ITKAAPILFASAALACGGL 728 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999998 9999999999999999999999998776 3566788777776666555
Q ss_pred HHHhc
Q 008450 217 IFLAG 221 (565)
Q Consensus 217 ~~~~~ 221 (565)
+.+++
T Consensus 729 l~~~L 733 (742)
T TIGR01299 729 LALKL 733 (742)
T ss_pred HHHhC
Confidence 54443
No 139
>PRK09952 shikimate transporter; Provisional
Probab=99.20 E-value=4.4e-10 Score=121.14 Aligned_cols=171 Identities=16% Similarity=0.083 Sum_probs=126.4
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
.++..+.+|....+++.|+++.+|++..+...+.....+...++.++.|+++||+ ||||++..+.++..++.+.+....
T Consensus 259 ~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 337 (438)
T PRK09952 259 RLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIGTLSAFPFFMAL 337 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667888888999999999999887766666666777888899999999999 999999888766555444333321
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH-HHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF-ISL 182 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~~l 182 (565)
... .....+.+..++.+++.+...+...+++.|.+|.+. |+.+.++.+.. ..+
T Consensus 338 ~~~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~~~~~~l 391 (438)
T PRK09952 338 EAQ--------------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGYQVASVV 391 (438)
T ss_pred HcC--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHHHHHHHH
Confidence 000 123344455666788888888889999999999988 99888885544 458
Q ss_pred HHHHHHHHHHHhcccc--cchhhHHHHHHHHHHHHHHHHhc
Q 008450 183 GTLMAVTVLVYIQDEI--SRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~--gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
|+.++|.+.+++.+.. +|+..+.+.+++.+++.+..+..
T Consensus 392 gg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 392 GGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999997744 48888877766666665555443
No 140
>PRK12382 putative transporter; Provisional
Probab=99.19 E-value=2e-10 Score=121.56 Aligned_cols=158 Identities=14% Similarity=0.141 Sum_probs=129.1
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
..+..+..+.+.|+.+ .|++ +.+.....+.++..++.++.|++.||+ ||||.+..+..+..++.++..+..
T Consensus 230 ~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----- 300 (392)
T PRK12382 230 VGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLAP----- 300 (392)
T ss_pred HHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHcc-----
Confidence 4444555666777754 4654 345666777888899999999999999 999999999888888877766552
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
+.+.+.++.++.|++.+...+.......|.+|+++ |++++++++...++|..+||
T Consensus 301 -------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~ 355 (392)
T PRK12382 301 -------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSG 355 (392)
T ss_pred -------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 25567778899999999888888889999998888 99999999999999999999
Q ss_pred HHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 189 TVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 189 ~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
.+.|++.+..||+..|.+.+++.+++.++.+.
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 356 PLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988777666655443
No 141
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.19 E-value=2e-10 Score=122.68 Aligned_cols=158 Identities=9% Similarity=0.022 Sum_probs=131.0
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
.+....++.|+++.+|.+..+.+++.+.+.++..++.++.|++.||. ++++.+..+.++..++.++..+. +
T Consensus 240 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~---~----- 310 (417)
T PRK10489 240 SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM---P----- 310 (417)
T ss_pred HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc---c-----
Confidence 45556778888877999999999999999999999999999999997 88888888888777777666554 2
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
+.....++.++.|++.+...+...+++.|..|++. |++++++++...++|..+|+.++
T Consensus 311 ----------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 311 ----------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred ----------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHH
Confidence 25566778888899888877888889999999888 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
|++.+..|++..+.+.++..++..++...
T Consensus 369 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 397 (417)
T PRK10489 369 GGLGAMMTPVASASASGFGLLIIGVLLLL 397 (417)
T ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999988888776655544444333
No 142
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.17 E-value=3.5e-12 Score=139.84 Aligned_cols=190 Identities=17% Similarity=0.240 Sum_probs=3.0
Q ss_pred HHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhc
Q 008450 27 ERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLR 106 (565)
Q Consensus 27 ~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~ 106 (565)
.+....|........+.+.++++++|.|++.+.+-++..+..++..|.++|. -|-|.+-.+.+++++|++++++ |
T Consensus 14 ~q~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~l----P 88 (539)
T PF03137_consen 14 FQMMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFAL----P 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhc----c
Confidence 3366677777778889999999999999999999999999999999999997 8889999999999999999976 3
Q ss_pred ccCCCCCCCC-----------Ccccc-------------------cCCcchhHHHHHHHHHHHHHhccccccchhhhhhc
Q 008450 107 QLRPRPCKET-----------ATHTC-------------------EQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTD 156 (565)
Q Consensus 107 ~~~~~~~~~~-----------~~~~~-------------------~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~ 156 (565)
.+..++|.-. .+..| +......+..++++.++.|+|....++...+|+=|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 3333333100 01111 11112246788999999999999999999999999
Q ss_pred cCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc---------------------c-cchhhHHHHHHHHHHH
Q 008450 157 QFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE---------------------I-SRSVGYGICSVAMFMA 214 (565)
Q Consensus 157 ~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~---------------------~-gw~~~f~i~~~~~~~~ 214 (565)
..++++ -+-.+++.+.+..+|.++|.++++++... . .|...|.+.+++.++.
T Consensus 169 nv~~~~------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ 242 (539)
T PF03137_consen 169 NVSKKN------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLS 242 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999888 88889999999999999999999866531 1 3888888888776666
Q ss_pred HHHHHhccccccc
Q 008450 215 IIIFLAGTKRYRY 227 (565)
Q Consensus 215 ~~~~~~~~~~~~~ 227 (565)
.+.++..+++.+.
T Consensus 243 aipl~~FPk~lp~ 255 (539)
T PF03137_consen 243 AIPLFFFPKKLPG 255 (539)
T ss_dssp -------------
T ss_pred HHHHHcCCccCCC
Confidence 5555655555443
No 143
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.16 E-value=7e-10 Score=118.08 Aligned_cols=169 Identities=14% Similarity=0.120 Sum_probs=126.3
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHH-HHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIA-IFAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~~~~~~~a~ 101 (565)
..++....+++...+++.|++ ++|++..+.+++.+.+.+++.++.++.|+++||+ |||+.+. .+.+...++.+.+..
T Consensus 230 ~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~~~~~~l~~ 307 (402)
T TIGR00897 230 VRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCGIFTLALYY 307 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHHHHHHHHHH
Confidence 344556677888888988875 5899999999999999999999999999999999 9888764 333333443333332
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
.... ...+.+...+..++.|++.+...+. .....|..| ++ |++++++.+...+
T Consensus 308 ~~~~-------------------~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~-~~------~g~~~g~~~~~~~ 360 (402)
T TIGR00897 308 IPQH-------------------FGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAP-KH------KGAAMSVLNLSAG 360 (402)
T ss_pred HHHc-------------------cCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCc-ch------hHHHHHHHHHHHH
Confidence 2110 0013555667788888888776553 455666544 46 9999999999999
Q ss_pred HHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 182 LGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+|..++|.++|++.+..||+.+|++.+++.+++.++..+
T Consensus 361 lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 361 LSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988777666555544
No 144
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.16 E-value=3.5e-10 Score=119.53 Aligned_cols=161 Identities=6% Similarity=-0.034 Sum_probs=137.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..........+.++|++ ++|.+..+.+.+.+...++..+..+++|++.||+ |+|+++.++.+...+...+.+++
T Consensus 213 ~~~l~~~~~~~~~~~~~~~l~-~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 213 AVCLIQGAHAAYYGFSAIYWQ-AAGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHHHHHHHHhH
Confidence 345556677778888999996 5899999999999999999999999999999999 99999999999999998888876
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH-HHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF-FIS 181 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ 181 (565)
+ +.+.+++...+.|++.|...+....++.+. |+++ |++..+++.. ...
T Consensus 291 ~------------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~~~g 339 (382)
T TIGR00902 291 E------------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNALAMG 339 (382)
T ss_pred h------------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHHHHH
Confidence 3 377788899999999999999999999987 8777 8888999864 567
Q ss_pred HHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Q 008450 182 LGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
+|.++|+.++|++.+.+|+ ..|.+.+++.++++++
T Consensus 340 ~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 340 GLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999986 6677776666655544
No 145
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.14 E-value=3.4e-10 Score=118.24 Aligned_cols=169 Identities=14% Similarity=0.029 Sum_probs=122.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhH-HHHHHHHHHHHHH---H
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKT-IAIFAAVQTLGTG---M 98 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~~~~~~---~ 98 (565)
..++....+.....+++.|+.+.+|.+..+.+++.+...++..++.+++|+++||+ |||+. +........++.+ +
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 301 (399)
T TIGR00893 223 GQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAIIAGLVLSL 301 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHHHHHHHHHH
Confidence 44555666777778899999999999999999999999999999999999999999 88861 1111111112211 1
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
...... . ............+.+.+.+ ..+...++..|.+|+++ |++++++.+.
T Consensus 302 ~~~~~~--~------------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 354 (399)
T TIGR00893 302 LMFATN--Y------------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGLINS 354 (399)
T ss_pred HHHHhc--c------------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHHHHH
Confidence 111100 0 0112333333333444444 78999999999999998 9999999999
Q ss_pred HHHHHHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHH
Q 008450 179 FISLGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~ 219 (565)
..++|..++|.+.|++.+..| |+..|++.+++.+++.+..+
T Consensus 355 ~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 355 LGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888 99999888777666555443
No 146
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.12 E-value=6.1e-10 Score=118.42 Aligned_cols=162 Identities=12% Similarity=0.120 Sum_probs=121.2
Q ss_pred HHHHHHHHhhh-cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccc-hhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 34 IAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGR-YKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 34 ~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
.....-+|+++ |.+-+.+..|+++++..++..+..+..|+...|. |. |+.++.+.++.++|+++.....-.|+
T Consensus 53 ~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~Pli~s~ii~~~g~llY~~l~~~~~---- 127 (488)
T KOG2325|consen 53 YLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKPLIVSFLIAIIGNLLYLALAYVPN---- 127 (488)
T ss_pred EEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccCHHHHHHHHHHHHHHHHHHHhccc----
Confidence 33445677764 4677788899999999999999999999999998 64 77888899999999999844433343
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
...++++++|++.|+|.|.. +..-+|++|....++ |.++++....+..+|.++||.++
T Consensus 128 ---------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R~rA~a~~~~~~vlg~ilGp~~q 185 (488)
T KOG2325|consen 128 ---------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------RPRAFAATSGGFVLGIILGPTIQ 185 (488)
T ss_pred ---------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------hHHHHHHhhhHHHHHHHHhHHHH
Confidence 25889999999999998876 566799999888888 89999888887777777777766
Q ss_pred HHhcc----cc---------cchhhHHHHHHHHHHHHHHHHhcc
Q 008450 192 VYIQD----EI---------SRSVGYGICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 192 g~l~~----~~---------gw~~~f~i~~~~~~~~~~~~~~~~ 222 (565)
..+.. .+ -|..+=|+.+++.++.+++..+..
T Consensus 186 ~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f 229 (488)
T KOG2325|consen 186 LAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFF 229 (488)
T ss_pred HHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhhe
Confidence 54432 10 133455666666665555544443
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.12 E-value=8.4e-10 Score=118.77 Aligned_cols=164 Identities=16% Similarity=0.118 Sum_probs=110.9
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcccc--chhHHHHHHHHHHHHHHHHHHHhhhc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG--RYKTIAIFAAVQTLGTGMLAMVTKLR 106 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~~~~~~~~a~~~~~~ 106 (565)
..++++..+++.|+.+++|++..+.+...+.+.++..++.+++|+++||+.+ |++......+...+........ +
T Consensus 257 ~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~---~ 333 (434)
T PRK11663 257 VVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLM---P 333 (434)
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHc---c
Confidence 3444566678899988899999999999999999999999999999999822 2332222211111111111111 1
Q ss_pred ccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHH
Q 008450 107 QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 186 (565)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~l 186 (565)
. .+.....+..+..|++.............|.+|+++ |++..++.+...++|.++
T Consensus 334 ~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~ 388 (434)
T PRK11663 334 F-------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVGLFAYLGAAL 388 (434)
T ss_pred c-------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHHHHHHHHHHH
Confidence 1 012223333333443322222233456678888887 999999999999999999
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 187 AVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 187 g~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+|.+.|++.+.+||+..|++.+++.+++.+..+.
T Consensus 389 ~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~ 422 (434)
T PRK11663 389 SGYPLAKVLEIWHWTGFFVVISIAAGISALLLLP 422 (434)
T ss_pred hcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887776655444443
No 148
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.11 E-value=6.7e-10 Score=120.15 Aligned_cols=165 Identities=18% Similarity=0.115 Sum_probs=114.0
Q ss_pred HHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccc-cchhHH-HHHHHHHHHHHHHHHHHhh
Q 008450 27 ERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFL-GRYKTI-AIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 27 ~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~-~~~~~~~~~~~~~~a~~~~ 104 (565)
....+++...++|.|++++.|++..+.+++...+.++..++.+++|+++||+. |||+.. .....+..++.++..+.
T Consensus 265 ~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~-- 342 (452)
T PRK11273 265 VYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLN-- 342 (452)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHh--
Confidence 33455677788999999889999999999999999999999999999999972 333322 22223333333322221
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+. .+.....++.++.|.+..........+..|.+|++. |++++++.+...++|.
T Consensus 343 -~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~ 396 (452)
T PRK11273 343 -PA-------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTGLFGYLGG 396 (452)
T ss_pred -cc-------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHHHHHHHHHH
Confidence 10 123334445555555433322333456779999988 9999999998888886
Q ss_pred H-HHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Q 008450 185 L-MAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 185 ~-lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
. +||.++|++.+..||+..|++.++.++++.+...
T Consensus 397 ~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 397 SVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 5 4799999999999999999987776665544443
No 149
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.11 E-value=1.3e-09 Score=119.16 Aligned_cols=171 Identities=12% Similarity=0.114 Sum_probs=127.8
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHH-HHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVT-DFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
+.....+....+.++|+.+++|++..+.+++.. ...++..++.+++|+++||+ |||+.+.++.++.+++.++......
T Consensus 233 l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~~l~~~~l~~ 311 (491)
T PRK11010 233 LYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVSNAGYWLLSI 311 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444555667888888889999999999985 44679999999999999999 9999888776665655443322110
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
.+ .+...+.+..++..++.|...++..++..+..+++. +++.+++.+...++|.
T Consensus 312 ~~--------------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~~lg~ 365 (491)
T PRK11010 312 TD--------------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALSAVGR 365 (491)
T ss_pred cc--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHHHHHH
Confidence 00 123344555566555556566777888899999888 7888999999999999
Q ss_pred HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 185 LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
.+++.+.|++.+..||+..|.+.+++.+.++++....++
T Consensus 366 ~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 366 VYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888889999999999999999888887777666665543
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.11 E-value=6.2e-10 Score=117.46 Aligned_cols=146 Identities=19% Similarity=0.127 Sum_probs=117.7
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
.+....++.|+.+++|++..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++..+........ +
T Consensus 255 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~----- 325 (405)
T TIGR00891 255 HPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPVFAI---G----- 325 (405)
T ss_pred hhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHHHHh---C-----
Confidence 34455678899888999999999999999999999999999999999 99999888776553322221111 0
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
.+...+.++.++.++..++..+..++++.|.+|+++ |++++++.+...++|..++|.+.
T Consensus 326 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g~~~g~~~~ 384 (405)
T TIGR00891 326 ---------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLGGALAPIIG 384 (405)
T ss_pred ---------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHHHHHHHHHH
Confidence 124556666677777777777888899999999998 99999999999999999999999
Q ss_pred HHhccccc-chhhHHHH
Q 008450 192 VYIQDEIS-RSVGYGIC 207 (565)
Q Consensus 192 g~l~~~~g-w~~~f~i~ 207 (565)
|++.+..| |+..+...
T Consensus 385 g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 385 ALLAQRLDEYGTALASL 401 (405)
T ss_pred HHHHHhccccchhHHhh
Confidence 99999988 87766543
No 151
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=1.1e-09 Score=113.83 Aligned_cols=169 Identities=12% Similarity=0.109 Sum_probs=139.1
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
+.++...+.|...+++.+++++..|++....+++...|.++..++..++|+++|| +.|+++.....++++..+.+.+.
T Consensus 219 ~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~~~l~l~~~ 296 (394)
T COG2814 219 ATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLALALLALTFT 296 (394)
T ss_pred HHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHHHHHHHHHh
Confidence 6777778899999999999999999999999999999999999999999999999 68888888888888777776665
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.+ +.+...+..++.|+..+........-+++.. +++ ++.+.+++....|+
T Consensus 297 ~~-----------------------~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~------~~~a~sl~~aa~nl 346 (394)
T COG2814 297 GA-----------------------SPALALALLFLWGFAFSPALQGLQTRLARLA-PDA------ADLAGSLNVAAFNL 346 (394)
T ss_pred cc-----------------------hHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCc------hHHHHHHHHHHHHH
Confidence 22 2455666666677776665555555555522 444 78899999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
|..+|..+||.+.+++|+....+..+++.+.++++.+...+
T Consensus 347 gia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 347 GIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999888888777666544
No 152
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.10 E-value=1.1e-09 Score=117.79 Aligned_cols=167 Identities=13% Similarity=0.009 Sum_probs=121.1
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
+..+++.+++|++..+.++......++..++.+++|+++||+ |||+.+.+++++..++.++.++......
T Consensus 305 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 374 (481)
T TIGR00879 305 YYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--------- 374 (481)
T ss_pred HHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc---------
Confidence 344555567899998889999999999999999999999999 9999999998888887777764311000
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
++ +........+....+..+....+..+....+..|.+|+++ |+++.++.+...++|.++++.+.+++.+
T Consensus 375 -~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 375 -TG---SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred -CC---cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0000012222222222222222334677778899999988 9999999999999999999999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 197 EISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 197 ~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
..+|++.|++.+++++++.++.++..+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecc
Confidence 899999999888777766666555443
No 153
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.10 E-value=1.3e-08 Score=109.42 Aligned_cols=367 Identities=12% Similarity=0.049 Sum_probs=210.6
Q ss_pred CCCCCCchhhHHHHHHHhHHHH---HHHHHHhhhcCCCCch-hhhhHHHHH----HHHHHHHHhhhHHHhhccccchhHH
Q 008450 14 SPADPSKTGIELCERLSTMGIA---VNLVTYLVGTMHLPSA-TSANIVTDF----MGTSFLLCLLGGFLADTFLGRYKTI 85 (565)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~---~~l~~yl~~~l~~s~~-~~~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~~ 85 (565)
.+....-++..+.+.+++.... .+...+.....+.... ..+...... .+...+..+..|.++||+ |||..+
T Consensus 17 ~~~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L 95 (463)
T KOG2816|consen 17 LASMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVL 95 (463)
T ss_pred cchhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhH
Confidence 3344444557777777655544 4555555554443322 233333333 578889999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHH--HhccccccchhhhhhccCCCCCh
Q 008450 86 AIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIA--LGTGGLKSSVSGFGTDQFDEKDE 163 (565)
Q Consensus 86 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g--~g~g~~~~~~~~~~~~~~~~~~~ 163 (565)
.+.+....+......+. .+.+++ +.+ -+.+...+...++++|...+++
T Consensus 96 ~~~~~~~~l~~~~~~~~--------------------------~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~- 145 (463)
T KOG2816|consen 96 LLPLFGTILPALCLLFQ--------------------------GYWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE- 145 (463)
T ss_pred HHHHHHHHHhHHHHHHH--------------------------HHHHhh---hcccccchhhhhhhhhhheeeccchhH-
Confidence 99888887777777665 222322 333 3445567888899999998888
Q ss_pred HhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccccccCCCC-CchHHHHHHH
Q 008450 164 KEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRYRYKKSSG-SPIVHIFQVI 242 (565)
Q Consensus 164 ~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 242 (565)
|.+.+++.......+..++|.+++++....|...+|.+..+..+++.+......|+-..++.+. ++..
T Consensus 146 -----R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~------ 214 (463)
T KOG2816|consen 146 -----RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR------ 214 (463)
T ss_pred -----HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc------
Confidence 9999999999999999999999999999999999999998887777666555554432221111 0000
Q ss_pred HHHHHhccccCCCCcCccccCCccccccCCCcchhHHhHHHHhhcCCCCCCCCCCCCccccchhhHhHhHHHhHHHHHHH
Q 008450 243 VAAIKKRKMDLPCNVGMLYEDTPEASRIHHTEQFHFLDKAAIVAEGDFEAGSTPNPWKLCSVTSVEEVKMVARLLPIWAT 322 (565)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (565)
.. .+... .+.+..+.... .++ ...+++.+...+..+..
T Consensus 215 --------~~---~~~~~----------~~~~~~~~~~~-------------~~~--------~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 215 --------EL---TPGSL----------DSSHVADAFQS-------------LTK--------VGPDRLLLLLLLVAFLS 252 (463)
T ss_pred --------cc---CCCcc----------cchhhhhhhhh-------------hcc--------cCCCccchHHHHHHHHH
Confidence 00 00000 00000000000 000 00111122111111111
Q ss_pred HHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHH
Q 008450 323 TIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVL 402 (565)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l 402 (565)
...-.....-....+.......+.. ..+.+.....+...+...+. .++..+.. ...+.+.+|+..
T Consensus 253 ~~~~~~~~~~~~~~yl~~~f~w~~~------~~s~~~~~~~~~~~i~~l~~----~~~l~~~l-----~~~~~i~lGl~~ 317 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKAKFGWNKK------EFSDLLSLVSILGIISQLLL----LPLLSSIL-----GEKRLISLGLLS 317 (463)
T ss_pred HHHHhcCceeEEEEEEeeecCcCHH------HHHHHHHHHHHHHHHHHHHH----HHHHHHHH-----hhhhHhhHHHHH
Confidence 1111111010001111111111111 11112222222222222221 11122211 111257889999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHH
Q 008450 403 SIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSL 482 (565)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~l 482 (565)
-.+...+.++.+ .. |.+....+.........|...+++...+.++.+|+..++...+..+
T Consensus 318 ~~~~~~~~af~~-------------------~~-w~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l 377 (463)
T KOG2816|consen 318 EFLQLLLFAFAT-------------------ET-WMMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGL 377 (463)
T ss_pred HHHHHHHHHHhc-------------------cc-hhhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHH
Confidence 999999988753 22 3333444444455577899999999999999999999999999999
Q ss_pred HHHHhhHHhhhhhhccc
Q 008450 483 GFFVSSFLVAVVKKVTG 499 (565)
Q Consensus 483 g~~ig~~l~~~l~~~~~ 499 (565)
...+++.+.+.+...+.
T Consensus 378 ~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 378 SGVVSPALYGNIFALTL 394 (463)
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 99999999998876554
No 154
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.10 E-value=1.3e-08 Score=112.64 Aligned_cols=193 Identities=14% Similarity=0.272 Sum_probs=151.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
...+.+....+........+.+.++++.++.|++.+.+-++..+...+..|.+-|. -|-|.+-+|++++++|++++++-
T Consensus 104 ~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~lgsll~alP 182 (735)
T KOG3626|consen 104 LAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGLGSLLFALP 182 (735)
T ss_pred HHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHHHHHHHhCh
Confidence 45555556668888889999999999999999999999999999999999999998 88899999999999999999764
Q ss_pred hhhcccCCCC------------------------------CCCCCcccc-c-CCcchhHHHHHHHHHHHHHhccccccch
Q 008450 103 TKLRQLRPRP------------------------------CKETATHTC-E-QASGFQMGVLYIALYLIALGTGGLKSSV 150 (565)
Q Consensus 103 ~~~~~~~~~~------------------------------~~~~~~~~~-~-~~~~~~~~~l~i~r~l~g~g~g~~~~~~ 150 (565)
....++ |...++... + +.+..-+.+++++.++.|+|....++..
T Consensus 183 ----Hf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlG 258 (735)
T KOG3626|consen 183 ----HFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLG 258 (735)
T ss_pred ----HHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCC
Confidence 222222 222222222 1 1222245578999999999999999999
Q ss_pred hhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccc------------------c-cchhhHHHHHHHH
Q 008450 151 SGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDE------------------I-SRSVGYGICSVAM 211 (565)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~------------------~-gw~~~f~i~~~~~ 211 (565)
.+|+=|-..+++ -...+++.+.+..+|.++|.++++++... . .|+..|++.+.+.
T Consensus 259 isYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~ 332 (735)
T KOG3626|consen 259 ISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALL 332 (735)
T ss_pred CccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHH
Confidence 999999888877 78888999999999999999999876531 1 3888898888887
Q ss_pred HHHHHHHHhcccccc
Q 008450 212 FMAIIIFLAGTKRYR 226 (565)
Q Consensus 212 ~~~~~~~~~~~~~~~ 226 (565)
++..+.+++.++..+
T Consensus 333 ~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 333 LFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHhCcccCc
Confidence 777777777665543
No 155
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.09 E-value=4.9e-10 Score=121.39 Aligned_cols=160 Identities=11% Similarity=0.008 Sum_probs=125.5
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc-ccchhHHHHH--HHHHHHHHHHHHHHhh
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF-LGRYKTIAIF--AAVQTLGTGMLAMVTK 104 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~~~~~--~~~~~~~~~~~a~~~~ 104 (565)
.+.++....++++|+. ++|++..+.+++.+...++..++.+++|+++||. .++|+...++ .+...++.+++....
T Consensus 254 ~~~~~~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~- 331 (455)
T TIGR00892 254 FLGFFAPIIFLVPYAK-DKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG- 331 (455)
T ss_pred HHHccchHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 3445556677888876 5799999999999999999999999999999984 1344433333 233333334443331
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+.+.+++.+++.|++.++..+...+++.|.+|+++ +++.++++....++|.
T Consensus 332 -----------------------~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~lg~ 382 (455)
T TIGR00892 332 -----------------------DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLVTIVECCAV 382 (455)
T ss_pred -----------------------hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHHHHHHHHHH
Confidence 26678889999999999999999999999999888 9999999999999999
Q ss_pred HHHHHHHHHhcccc-cchhhHHHHHHHHHHHHHHH
Q 008450 185 LMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIF 218 (565)
Q Consensus 185 ~lg~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~ 218 (565)
++||.++|++.+.. +|++.|++.+++.+++.+..
T Consensus 383 ~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 383 LIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred HccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 99999999999877 59999999887766554443
No 156
>PRK15075 citrate-proton symporter; Provisional
Probab=99.08 E-value=3.2e-09 Score=114.25 Aligned_cols=147 Identities=15% Similarity=0.134 Sum_probs=107.4
Q ss_pred HHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHH-HHHHHhhh
Q 008450 27 ERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG-MLAMVTKL 105 (565)
Q Consensus 27 ~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~a~~~~~ 105 (565)
....++++..+++.|+++.+|++..+.+++...+.++..++.+++|+++||+ |||+++..+.++..+... .......
T Consensus 250 ~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~- 327 (434)
T PRK15075 250 TTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPALSWLVA- 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 3445667778899999988999999999988889999999999999999999 999988776544332221 1111101
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH-HHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS-LGT 184 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-lg~ 184 (565)
. .....+.+..++.+++.+...+....++.|.+|++. |+..+++.+...+ ++.
T Consensus 328 -~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~g 381 (434)
T PRK15075 328 -A-------------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIFG 381 (434)
T ss_pred -C-------------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHHh
Confidence 0 012233344455566667777777789999999999 9999998655444 457
Q ss_pred HHHHHHHHHhcccccch
Q 008450 185 LMAVTVLVYIQDEISRS 201 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~ 201 (565)
.++|.+.|++.+..|++
T Consensus 382 ~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 382 GFTPAISTWLIHVTGDK 398 (434)
T ss_pred hhHHHHHHHHHHhcCCc
Confidence 78999999999988864
No 157
>PRK10504 putative transporter; Provisional
Probab=99.06 E-value=1.6e-09 Score=117.56 Aligned_cols=150 Identities=11% Similarity=0.036 Sum_probs=120.1
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++...++.......+.|++..+|.++.+.+++.....++..++.++.|+++||+ |||+++..+..+..++..+..+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 347 (471)
T PRK10504 269 GSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLALVSLLFMLV 347 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHhc
Confidence 34555555544455667777777899999999999999999999999999999999 99999999888888776666553
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.. ......+.+..++.|++.+...+..+.+..+.+|+++ ++.++++.+....+
T Consensus 348 ~~---------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 400 (471)
T PRK10504 348 AL---------------------LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSMIMQL 400 (471)
T ss_pred cc---------------------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHHHHHH
Confidence 11 0123344556677888888888889999999999888 99999999999999
Q ss_pred HHHHHHHHHHHhcccccc
Q 008450 183 GTLMAVTVLVYIQDEISR 200 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw 200 (565)
|..+|+.++|.+.+..++
T Consensus 401 g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 401 SMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999988776655
No 158
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.06 E-value=1.5e-08 Score=108.91 Aligned_cols=162 Identities=16% Similarity=0.158 Sum_probs=116.3
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc--cc-chhH-HHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF--LG-RYKT-IAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G-rr~~-~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
...+|+.+++|++++|...+.+...+.- ..-++.|.++|.+ +| |||- ++++.++..++...++..+...
T Consensus 11 ~~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~------ 83 (433)
T PF03092_consen 11 AIYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASE------ 83 (433)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhccccc------
Confidence 3457888999999999887666555444 4467789999986 33 4444 4445555544455554432101
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
.......+..++..+|........-++..|...++.+. ++...++.+....+|.+++..++|
T Consensus 84 --------------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G 145 (433)
T PF03092_consen 84 --------------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSG 145 (433)
T ss_pred --------------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhh
Confidence 12445566777788999999999999999998766532 788899999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
.+.+..+++..|.+.+++..+..+..++..+
T Consensus 146 ~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 146 PLLDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhhhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 9999999999999887776655444444333
No 159
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.05 E-value=2.2e-09 Score=115.58 Aligned_cols=170 Identities=17% Similarity=0.048 Sum_probs=115.7
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHH---HHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG---TGMLAM 101 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~---~~~~a~ 101 (565)
++.....+++..+++.|+++..|+++.+.++....+.++..++.+++|+++||+ |+++....+.....+. .++...
T Consensus 261 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (438)
T TIGR00712 261 VFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTLVTIAVIVYWM 339 (438)
T ss_pred HHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHHHHHHHHHHHh
Confidence 344455577888899999988999999999999999999999999999999998 6544333333222211 111111
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
. +. .+.....+..++.|.+..+..........|.+|+++ |+++.++.+...+
T Consensus 340 ~---~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~ 391 (438)
T TIGR00712 340 N---PA-------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFTGLFGY 391 (438)
T ss_pred c---CC-------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhhchHHH
Confidence 1 10 012333344444554433322222345778899888 9999999998888
Q ss_pred HH-HHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 182 LG-TLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 182 lg-~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
+| .++||.+.|++.+..||...|++..+..+++.+..++..+
T Consensus 392 ~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 392 LGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred hhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 76 5789999999999999999998877666655555554433
No 160
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.01 E-value=3.9e-09 Score=111.71 Aligned_cols=168 Identities=15% Similarity=0.071 Sum_probs=124.3
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHH-HHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~ 101 (565)
..++...+......+.++|+.+ .|+++.+.+++...... ...++.+++|++.||+ |+|+++.++..+..+.......
T Consensus 216 ~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~ 293 (390)
T TIGR02718 216 LALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGSLALLWFA 293 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHH
Confidence 3455656666677778888875 79999999999888764 6677789999999999 9999998877766443332222
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCC-CChHhhhhhcceeehhhHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFFSRFFFFI 180 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~~ 180 (565)
... .. .......+.....+.+++.|...+...+...+..++ +. +++.+++.+...
T Consensus 294 ~~~-~~-----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~ 349 (390)
T TIGR02718 294 QAA-FW-----------------LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQSTR 349 (390)
T ss_pred HHH-cc-----------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHHHH
Confidence 111 00 001133344455566677787778888888887766 56 899999999999
Q ss_pred HHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHH
Q 008450 181 SLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAII 216 (565)
Q Consensus 181 ~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~ 216 (565)
++|..+||.++|++.+..||+..|.+.+++.+++.+
T Consensus 350 ~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 350 DLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887766665543
No 161
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.01 E-value=1.3e-07 Score=96.70 Aligned_cols=154 Identities=18% Similarity=0.162 Sum_probs=106.9
Q ss_pred HHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCc
Q 008450 39 VTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETAT 118 (565)
Q Consensus 39 ~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 118 (565)
...+-+++|++..|++.+..+-...+.+..++.|.++||+ |||+..++..++++++++.--. +
T Consensus 57 ~Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~~----~------------ 119 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKHS----S------------ 119 (354)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhc----c------------
Confidence 3334467899999999999999999999999999999999 9999999999999888765432 2
Q ss_pred ccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCC-hHhhhhhcceeehhh-HHHHHHHHHHHHHHHHhcc
Q 008450 119 HTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKD-EKEKTQMAYFFSRFF-FFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 119 ~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~-~~~~lg~~lg~~i~g~l~~ 196 (565)
+++.++++|++.|++++....+..+.+.....+++ |++- .+.-++... ..+.+-++++.+++-++.+
T Consensus 120 ---------~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~--L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 120 ---------NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW--LSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ---------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH--HHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 48889999999999999999888887654322211 1111 233232222 1122233444455556666
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHHh
Q 008450 197 EISR--SVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 197 ~~gw--~~~f~i~~~~~~~~~~~~~~ 220 (565)
..+. ..+|....++.+++.++...
T Consensus 189 ~~~~g~vaPF~~a~~~l~~~~~~I~~ 214 (354)
T PF05631_consen 189 WFGFGPVAPFDAAIVLLAVAAVLILK 214 (354)
T ss_pred HhCCCCcchHHHHHHHHHHHHHHHHh
Confidence 5554 77888777666665555443
No 162
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.2e-09 Score=110.81 Aligned_cols=163 Identities=21% Similarity=0.211 Sum_probs=127.4
Q ss_pred HhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccc-cchhHHHH-HHHHHHHHHHHHHHHhhhcc
Q 008450 30 STMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFL-GRYKTIAI-FAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~~~-~~~~~~~~~~~~a~~~~~~~ 107 (565)
.=||+..+.|.|+.+..|+|..++++..+.|-++...+.+++||++||.+ |||...-+ +++...++.+..-.+ |+
T Consensus 267 vR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~---~~ 343 (448)
T COG2271 267 VRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA---PN 343 (448)
T ss_pred HHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC---CC
Confidence 34677888999999999999999999999999999999999999999986 77755544 333333333333333 22
Q ss_pred cCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH-HHHH
Q 008450 108 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL-GTLM 186 (565)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~l 186 (565)
.+..+..++.++.|.-.-+..-.+-....|..|.+. -|++.+....+..+ |.++
T Consensus 344 -------------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~Glf~Yl~Ga~~ 398 (448)
T COG2271 344 -------------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFVGLFAYLIGAAL 398 (448)
T ss_pred -------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchhhhHHHHhhHHh
Confidence 246777788888887777766666677788888888 99999999999988 9999
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 187 AVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 187 g~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+-...|++.|.+||...|++..+..+++.+++..
T Consensus 399 a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 399 AGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred cCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998776666555544443
No 163
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.01 E-value=7.2e-09 Score=112.29 Aligned_cols=174 Identities=14% Similarity=0.087 Sum_probs=142.6
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccch--hHHHHHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRY--KTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~~~~~~~~a~~ 102 (565)
++.+-+.-.+......|.++++|++..+...+.....+..++++.+.|++.||+ |.| +++++++++..+..+...+.
T Consensus 291 ~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~~~i~~~g~~G 369 (477)
T PF11700_consen 291 FLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILWIIIPLYGLFG 369 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHHHHH
Confidence 444446777888899999999999999999999999999999999999999999 999 88888887775543333331
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
-.++ .....+.+.+++.-++.|+..|...+..-+++++..|+++ .+..++++....-.
T Consensus 370 -~~~~---------------~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efFgly~i~gk~ 427 (477)
T PF11700_consen 370 -FWPS---------------FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFFGLYAITGKA 427 (477)
T ss_pred -hhhc---------------ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHHHHHHHHHHH
Confidence 0010 0112346778888899999999999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHhc
Q 008450 183 GTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~ 221 (565)
.+.+||.+.|.+.+..| -|..+....++.++++++++..
T Consensus 428 ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999887 8888888877777777776554
No 164
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.99 E-value=1.3e-08 Score=108.33 Aligned_cols=156 Identities=11% Similarity=-0.075 Sum_probs=120.3
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
+......+.|+.+++|+++.+.++......++..++.++.|+++||+ |+|+.+.++.++..++..+.++....+
T Consensus 232 ~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g~~~~~~~~~~~----- 305 (406)
T PRK15402 232 LAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAGLLLAALATVIS----- 305 (406)
T ss_pred HHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHcc-----
Confidence 34444567788888999999999988888888999999999999999 999999999888888887777652111
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
..+...++++.++.|+|.+...+.......+.. +++ |++..+..++...+|..+|+.+.
T Consensus 306 --------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~-~~~------~g~~~~~~~~~~~~~~~~g~~~~ 364 (406)
T PRK15402 306 --------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSS-DVS------KGTVSAAMGMLSMLIFTVGIELS 364 (406)
T ss_pred --------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhc-ccc------ccHHHHHHHHHHHHHHHHHHHHH
Confidence 123556778888899999887777666654443 355 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHH
Q 008450 192 VYIQDEISRSVGYGICSVAMFMA 214 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~ 214 (565)
+++.+..++....+..++..++.
T Consensus 365 ~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 365 KHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HhcccCCchHHHHHHHHHHHHHH
Confidence 99988777665555544443333
No 165
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.98 E-value=1.3e-08 Score=109.31 Aligned_cols=164 Identities=16% Similarity=0.110 Sum_probs=108.5
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH-Hhhhc
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM-VTKLR 106 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~-~~~~~ 106 (565)
...+|+...+++.|+.+.+|++..+.+...+...++..++.++.|+++||+ |||+++.++.++..+....... ..+.+
T Consensus 256 ~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T PRK10406 256 SLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSALQNVS 334 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 566788889999999988999999999988888888889999999999999 9999887765544333222211 11100
Q ss_pred ccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH-HHH
Q 008450 107 QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL-GTL 185 (565)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~ 185 (565)
+....+....+...+.+...+....+..|.+|++. |+.++++.+...++ ...
T Consensus 335 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~ 387 (432)
T PRK10406 335 ---------------------SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGG 387 (432)
T ss_pred ---------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHh
Confidence 11222222222223333344556788899999999 99999998876554 344
Q ss_pred HHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHh
Q 008450 186 MAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 186 lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~ 220 (565)
..|.+.+++. ..| |...+++.++..+++.+..++
T Consensus 388 ~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 388 SAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5777778664 345 555666555555555444444
No 166
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.98 E-value=1.4e-08 Score=110.32 Aligned_cols=157 Identities=10% Similarity=-0.009 Sum_probs=114.7
Q ss_pred HHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcc
Q 008450 40 TYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATH 119 (565)
Q Consensus 40 ~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 119 (565)
+++.+++|.+..+..+......+...++.+++|+++||+ |||++++.+.++.+++.++++....-+.
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~------------ 361 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA------------ 361 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc------------
Confidence 445567888877777777778888999999999999999 9999999999999988887765421010
Q ss_pred cccCCcchhHHHHHHHHHHHHHhccc-cccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH------
Q 008450 120 TCEQASGFQMGVLYIALYLIALGTGG-LKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV------ 192 (565)
Q Consensus 120 ~~~~~~~~~~~~l~i~r~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g------ 192 (565)
.......+.++.+.+.+. ..|....++.|.+|+++ |++++++.+...++|.++++.+.+
T Consensus 362 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~ 427 (479)
T PRK10077 362 --------PGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKNS 427 (479)
T ss_pred --------ccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhcc
Confidence 011223334444444443 34778899999999888 999999999998888888865554
Q ss_pred HhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 193 YIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
++.+.++|++.|++.++..+++.++.+...+
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 428 WLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred chhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4446788999998877766666555544433
No 167
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.98 E-value=6.2e-09 Score=109.97 Aligned_cols=154 Identities=7% Similarity=0.013 Sum_probs=122.0
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~ 107 (565)
...+.+....+++|+. +.|.+..+.+.+.+...++..+...+.|++.||+ |+|+++.++.+...++.++.+..+
T Consensus 218 ~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~~~~~~~~~~---- 291 (382)
T PRK11128 218 QGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVVRWGLMGSTT---- 291 (382)
T ss_pred HHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 3444456677788885 5899999999999988899999999999999999 999999999888888777766652
Q ss_pred cCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh-HHHHHHHHH
Q 008450 108 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF-FFISLGTLM 186 (565)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~~lg~~l 186 (565)
+++.+.+..++.|++.+...+....+..+. ++++ +++..+++. ....+|..+
T Consensus 292 --------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~g~~i 344 (382)
T PRK11128 292 --------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSALAMGGSIAI 344 (382)
T ss_pred --------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHHHHHHHHHH
Confidence 367788899999999998888888887775 5555 777888775 445678899
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHHHH
Q 008450 187 AVTVLVYIQDEISRSVGYGICSVAMFMAI 215 (565)
Q Consensus 187 g~~i~g~l~~~~gw~~~f~i~~~~~~~~~ 215 (565)
||.++|++.+..|+ ..|+..+++.+.++
T Consensus 345 g~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 345 MTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999999998887 45665555544443
No 168
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.98 E-value=3.4e-09 Score=116.10 Aligned_cols=147 Identities=12% Similarity=0.021 Sum_probs=125.2
Q ss_pred hhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH
Q 008450 22 GIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 22 ~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~ 101 (565)
...++....+++...+++.|++..+|.++.+.+.....+.++..++.+++|++.||+ |||+.+..+.++..++..++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHH
Confidence 356666677888888999999999999999999999999999999999999999999 9999998888888887776654
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
... . .+.+...+..++.|+|.|...+.....+.+..|+++ ++.+.++++...+
T Consensus 345 ~~~-~--------------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~ 397 (495)
T PRK14995 345 TDF-S--------------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETMAYE 397 (495)
T ss_pred hcC-C--------------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHHHHH
Confidence 311 0 123445667888999999999989999999999888 9999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 008450 182 LGTLMAVTVLVYIQD 196 (565)
Q Consensus 182 lg~~lg~~i~g~l~~ 196 (565)
+|..+|+.+.|.+.+
T Consensus 398 lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 398 LGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 169
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.96 E-value=1.3e-08 Score=108.79 Aligned_cols=142 Identities=18% Similarity=0.091 Sum_probs=106.4
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
+...++.|+.+ .|.+..+.+.+.+.+.++..++.+++|+++||+ |||+.+..+.++..+..++.... +.
T Consensus 250 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~------ 318 (426)
T PRK12307 250 IFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ------ 318 (426)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc------
Confidence 55677888775 699999999999999999999999999999999 99999988887766655444332 11
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
.....+.+..+..+.+..+..+..+.++.|.+|++. |++++++.+...++|..+||.+.|+
T Consensus 319 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 319 -------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred -------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 012222222222333333444567788899999988 9999999999999999999999999
Q ss_pred hcccccchhhHH
Q 008450 194 IQDEISRSVGYG 205 (565)
Q Consensus 194 l~~~~gw~~~f~ 205 (565)
+.+.+|+....+
T Consensus 380 l~~~~g~~~~~~ 391 (426)
T PRK12307 380 LGITMGLGAALT 391 (426)
T ss_pred HHHcccHHHHHH
Confidence 999888765433
No 170
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.96 E-value=5.9e-09 Score=107.70 Aligned_cols=177 Identities=17% Similarity=0.111 Sum_probs=138.5
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.++..--++.++...++.|++++++.++.+++.+...+.+...+.++.+|+|+||+ |.+|+.......++++..+..+.
T Consensus 226 lY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~~~~~l~~~ 304 (417)
T COG2223 226 LYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMALAAALLSLF 304 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHHHHHHHHcc
Confidence 44445557888999999999999999999999999999999999999999999999 88888888888888877777665
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.+ . . .++.+...+++..+..++..|.-..++..++...+|++ -|...++..+..++
T Consensus 305 ~~--~-~--------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vga~G~l 360 (417)
T COG2223 305 LT--G-F--------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVGAIGGL 360 (417)
T ss_pred cc--c-c--------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHHHhccc
Confidence 21 0 0 01223444555455556666666666778888888775 68889999999999
Q ss_pred HHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHhcccc
Q 008450 183 GTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGTKR 224 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~~~~ 224 (565)
|...-|...+...+..| |...|++...+.+++..+.+....|
T Consensus 361 GGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 361 GGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred cccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98888888898888887 9999999888888887776665544
No 171
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.96 E-value=1e-08 Score=109.05 Aligned_cols=157 Identities=12% Similarity=0.177 Sum_probs=109.7
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHH-HHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFM-GTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
...++|+.+++|+++.+.+++.+... ++..++.+++|++.||+ |||+.+.++..+..+..+........++
T Consensus 230 ~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l~~l~~~~~~~~~~------- 301 (402)
T PRK11902 230 SLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAVSNLGYWVLAVTPK------- 301 (402)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHHHHhcCC-------
Confidence 34556777889999999999887665 46889999999999999 9999888777776665544432211011
Q ss_pred CCCcccccCCcchhHHHHHHHH----HHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHH
Q 008450 115 ETATHTCEQASGFQMGVLYIAL----YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV 190 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i 190 (565)
+.+.+.++. +..|++.+...+....++.+.+|.++ + +++....++|.+++..+
T Consensus 302 -------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~~~~~~~~ 358 (402)
T PRK11902 302 -------------HLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y----ALLSALASVGRVYVGPT 358 (402)
T ss_pred -------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H----HHHHHHHHHHHHHHHHH
Confidence 134444443 34556666666777777777766554 4 45555567787767778
Q ss_pred HHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 191 LVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 191 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
+|++.+..||+..|.+.+++.+++.++.+...+
T Consensus 359 ~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 359 SGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999988887776666544443
No 172
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.94 E-value=2e-07 Score=98.74 Aligned_cols=145 Identities=16% Similarity=0.299 Sum_probs=108.2
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
+...+++...-++.-.+..+++.++++- +.+..|+.+-.+-++.+.++ .++
T Consensus 409 Gv~~a~~~~gEI~~~ffs~klI~kiGHv----------~v~~lgLa~~~~Rf~~~S~L-------------------~n~ 459 (618)
T KOG3762|consen 409 GVVSALCHAGEILFYFFSFKLIEKIGHV----------NVMYLGLACNVGRFLYYSYL-------------------QNP 459 (618)
T ss_pred eehhhhhccchHHHHHHHHHHHHHhccc----------ceeeehhhHHHHHHHHHHHh-------------------cCc
Confidence 3456667777777777777776665553 23667777777777777664 467
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHH-HHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTL-SLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~-~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
|.+++.-++.++..+.++.+..+|+...+|+++|+++.|+..... .+|..+|+.+++.+-+..+
T Consensus 460 W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg--------------- 524 (618)
T KOG3762|consen 460 WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG--------------- 524 (618)
T ss_pred hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh---------------
Confidence 777778899999999999999999999999999999999998876 6888888888777643211
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 515 RLDLFYGLLAILSIINLVIYLICAVWYKPKK 545 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~ 545 (565)
....|..+++.+++.++++...-+..+++.
T Consensus 525 -~~ttf~~~giAcl~~l~~~~~iq~~l~~~~ 554 (618)
T KOG3762|consen 525 -ARTTFRIFGIACLVTLALFISIQLLLKRRG 554 (618)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhhhcccc
Confidence 245688888888888887766655444443
No 173
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.94 E-value=1.8e-08 Score=106.51 Aligned_cols=157 Identities=12% Similarity=0.020 Sum_probs=111.6
Q ss_pred hHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCC
Q 008450 31 TMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRP 110 (565)
Q Consensus 31 ~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 110 (565)
.+....++++|+.+.+|+++.+.+++.+.+.++..++.++.|++.||+ |+|+.+..+..+.+++.++.....+
T Consensus 215 ~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~~~~~~~~~------ 287 (382)
T PRK10091 215 VFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLALLMLFFFGG------ 287 (382)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHHHHHHHHHh------
Confidence 344455677888888999999999999999999999999999999999 9999999888888877765543211
Q ss_pred CCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccC-CCCChHhhhhhcceeehhhHHHHHHHHHHHH
Q 008450 111 RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQF-DEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 189 (565)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~ 189 (565)
+.+...+..++.++|.++..+.......+.. +++. ++... .+...++|..+||.
T Consensus 288 -----------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~g~~~Gp~ 342 (382)
T PRK10091 288 -----------------MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAAG--GQIAFNLGSAIGAY 342 (382)
T ss_pred -----------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHHH--HHHHHHHHHHHHHH
Confidence 1334455555566665554444444444433 3333 44432 35567899999999
Q ss_pred HHHHhccc-ccchhhHHHHHHHHHHHHHHHH
Q 008450 190 VLVYIQDE-ISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 190 i~g~l~~~-~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
++|++.+. .+|++.+.+.++.+++++....
T Consensus 343 ~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 343 CGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 99999885 6899999987766555444433
No 174
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.93 E-value=6.6e-09 Score=107.71 Aligned_cols=143 Identities=13% Similarity=0.098 Sum_probs=119.5
Q ss_pred HHHHhHHHH-HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 27 ERLSTMGIA-VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 27 ~~~~~~~~~-~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
....+.+.. ...+.|.++.+|.+..+.+++.....++..++.++.|++.||+ |||+.+..+..+.+++..+..+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~- 299 (365)
T TIGR00900 222 FNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIGLAILVVGLTPP- 299 (365)
T ss_pred HHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHHHHHHHHHhhch-
Confidence 334444444 5566666666999999999999999999999999999999999 9999998887777776666655411
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
+.+.+.+..++.|++.+...+...+++.|..|+++ |++..++.+...++|..
T Consensus 300 ----------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~~ 351 (365)
T TIGR00900 300 ----------------------NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFSLSHAAWP 351 (365)
T ss_pred ----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHH
Confidence 25667888899999999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHhccccc
Q 008450 186 MAVTVLVYIQDEIS 199 (565)
Q Consensus 186 lg~~i~g~l~~~~g 199 (565)
+++.++|++.+.+|
T Consensus 352 ~g~~~~g~l~~~~g 365 (365)
T TIGR00900 352 LGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999987653
No 175
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.93 E-value=5.5e-09 Score=112.05 Aligned_cols=140 Identities=16% Similarity=0.100 Sum_probs=110.4
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
..+.|++..++ +..+.+++.+...++..++.+++|+++||+ |||+++.++.++.+++.++..+..
T Consensus 244 ~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~------------- 308 (437)
T TIGR00792 244 VQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVLGYLIFFFAG------------- 308 (437)
T ss_pred hhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcc-------------
Confidence 34445544555 456677888888999999999999999999 999999999888888777765541
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCCh-HhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDE-KEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~-~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
.+.+.+.+..++.|++.+...+...++++|..|.++. ..++.+|.++++++....+|..+|+.+.|++.
T Consensus 309 ----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll 378 (437)
T TIGR00792 309 ----------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLIL 378 (437)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1245667778888999999999999999999875432 12233789999999999999999999999998
Q ss_pred ccccch
Q 008450 196 DEISRS 201 (565)
Q Consensus 196 ~~~gw~ 201 (565)
+..||.
T Consensus 379 ~~~G~~ 384 (437)
T TIGR00792 379 GIIGYV 384 (437)
T ss_pred HHcCCC
Confidence 877764
No 176
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.92 E-value=1e-08 Score=112.36 Aligned_cols=158 Identities=15% Similarity=0.105 Sum_probs=136.8
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
..+...+|.+..+.+|.++...|++.+++.+|..++.++.+++.+|+ ++++.+..+.+.++++.+.++++.+
T Consensus 235 ~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~~~lal~~~------- 306 (524)
T PF05977_consen 235 SAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALALLLLALSPS------- 306 (524)
T ss_pred hHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHHHHHhcchH-------
Confidence 33445567777788999999999999999999999999999999998 9999999999888888888888732
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
.+..+++.++.|++........++.+-...|++. ||+.++++.+....+..+|..+.
T Consensus 307 -----------------~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~~~g~~~lGsll~ 363 (524)
T PF05977_consen 307 -----------------FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMVFFGGMPLGSLLW 363 (524)
T ss_pred -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888899999999988888899999999998 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHHHh
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
|.+.+.+|-+..+.+.++..+++.++...
T Consensus 364 G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 364 GFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998877766555554443
No 177
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.92 E-value=8e-09 Score=110.43 Aligned_cols=157 Identities=10% Similarity=0.011 Sum_probs=109.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhh-cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhH-HHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVG-TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKT-IAIFAAVQTLGTGMLA 100 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~-~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~~~~~~~~a 100 (565)
..+|....++++..++|.|+++ ..|++..+.+.+.....++..++.+++|+++||+ +||+. +.+..+...++. +..
T Consensus 250 ~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~~~~-~~~ 327 (412)
T TIGR02332 250 AYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAAAGW-LLA 327 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHHHHH-HHH
Confidence 3556666788889999999976 3578888999999999999999999999999999 87664 333333333332 222
Q ss_pred HHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH
Q 008450 101 MVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI 180 (565)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 180 (565)
... ++ .....++..+.++|.....+.......|.+|+++ |+.++++.+...
T Consensus 328 ~~~--~~---------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~~~~ 378 (412)
T TIGR02332 328 SAT--DH---------------------NLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVINATG 378 (412)
T ss_pred Hhc--CC---------------------HHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHHHhh
Confidence 110 11 1112222223333333333334445566778777 999999999999
Q ss_pred HHHHHHHHHHHHHhccccc-chhhHHHHHHH
Q 008450 181 SLGTLMAVTVLVYIQDEIS-RSVGYGICSVA 210 (565)
Q Consensus 181 ~lg~~lg~~i~g~l~~~~g-w~~~f~i~~~~ 210 (565)
++|.+++|.+.|.+.+..| |++.|++.+++
T Consensus 379 ~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 379 NIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 9999999999999999875 99999876654
No 178
>PRK10054 putative transporter; Provisional
Probab=98.91 E-value=1.5e-08 Score=107.79 Aligned_cols=164 Identities=11% Similarity=0.003 Sum_probs=124.7
Q ss_pred HHHHHHhHHHHHHHHHHhhh--cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVG--TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~--~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
++..+.+.......+.|+.+ +.+.+....+++...+.+......++.|++.||+ ++|+.+..++.+..++..+.++.
T Consensus 216 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 294 (395)
T PRK10054 216 FLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCFVIGLVGFIFS 294 (395)
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHHHHHHHHHHHc
Confidence 33333333344556666643 3455666777888888777777888999999999 99999999988888887777654
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.+ +.+.+.++.++.++|.+...|....++.+..|++. |+++++... ...+
T Consensus 295 ~~-----------------------~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~~-~~~~ 344 (395)
T PRK10054 295 GN-----------------------SLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQS-LGWL 344 (395)
T ss_pred ch-----------------------HHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHHH-HHHH
Confidence 11 25556778889999999888999999999999888 898887654 4568
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHH
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
|..+||.++|++.++.|....|++.+.+..+++++..
T Consensus 345 G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 345 GAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888887666555555544
No 179
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.91 E-value=2.6e-08 Score=105.68 Aligned_cols=151 Identities=15% Similarity=0.112 Sum_probs=117.3
Q ss_pred HHHHHHhhhcC---CCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 36 VNLVTYLVGTM---HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 36 ~~l~~yl~~~l---~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
...+.|+.+.+ +.+..+.+.+.+...+...++.++.|++.||+ |||+.+.++.++.+++..+.+.++
T Consensus 236 ~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~~l~~~~~~~~~--------- 305 (396)
T TIGR00882 236 QQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIMSVRIIGSSFAT--------- 305 (396)
T ss_pred HHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHhcC---------
Confidence 34667776654 55666778888888888899999999999999 999999999888888777666542
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeeh-hhHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR-FFFFISLGTLMAVTVL 191 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~lg~~lg~~i~ 191 (565)
+.+.+++.+++.|++.+........+..+..+++. ++...+. ++....+|..+++.++
T Consensus 306 ---------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~~~~~~~lg~~~~~~l~ 364 (396)
T TIGR00882 306 ---------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIGFQFAKQLAMIFLSTLA 364 (396)
T ss_pred ---------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHHHHHHHHHHHHHHHHhH
Confidence 25667788888888876655555556666666665 6776766 5677899999999999
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHH
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
|++.+..||+.+|.+.+++.++..++
T Consensus 365 G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 365 GNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 99999999999999887776655444
No 180
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.89 E-value=6.7e-09 Score=112.85 Aligned_cols=148 Identities=14% Similarity=0.088 Sum_probs=123.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+.+++....++.|+++.+|.++.+.+++.....++..++.+++|++.||+ |||+++.++..+.+++..+..+.
T Consensus 263 ~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~~~~~~~~~ 341 (485)
T TIGR00711 263 YMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAVGFYWRAFT 341 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHhcc
Confidence 44555667778888899999999999999999999999999999999999999999 99999999988888887776632
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
.. ++ .+...+.+..++.|+|.+...+.......+..|+++ |+.+.++++...++
T Consensus 342 ~~-~~-------------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 395 (485)
T TIGR00711 342 FT-PD-------------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNFTRQL 395 (485)
T ss_pred CC-CC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHHHHHH
Confidence 11 11 124556667888999999888778888888888887 99999999999999
Q ss_pred HHHHHHHHHHHhccc
Q 008450 183 GTLMAVTVLVYIQDE 197 (565)
Q Consensus 183 g~~lg~~i~g~l~~~ 197 (565)
|..+|+.+.+.+.++
T Consensus 396 g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 396 GGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987664
No 181
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.89 E-value=2e-08 Score=109.46 Aligned_cols=158 Identities=12% Similarity=0.115 Sum_probs=102.8
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchh-------HHHHHHHHHHHHHHHHHHHhh
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYK-------TIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-------~~~~~~~~~~~~~~~~a~~~~ 104 (565)
++...+++.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ .+.+..++..+..++.+...
T Consensus 269 ~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~- 346 (476)
T PLN00028 269 LTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQTLGGVFCIWLGRAN- 346 (476)
T ss_pred HHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHHHHHHHHHHHhcccc-
Confidence 34455678898888999999999999999999999999999999998 8752 22222222222222222221
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+.....+..++.+++.++..+...+++.+..| ++ ++...++.....++|.
T Consensus 347 -----------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~g~lg~ 396 (476)
T PLN00028 347 -----------------------SLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISGLTGAGGNVGA 396 (476)
T ss_pred -----------------------hHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhhhhhccccHHH
Confidence 13334444555555554444445555555544 45 8888888777666777
Q ss_pred HHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhcc
Q 008450 185 LMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~ 222 (565)
.+++.+.+ ..+..+|+.+|++.+++.+++.++.++.+
T Consensus 397 ~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 397 VLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 66665544 22345699999998877777766665553
No 182
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.88 E-value=2.8e-08 Score=102.09 Aligned_cols=147 Identities=10% Similarity=0.109 Sum_probs=115.3
Q ss_pred HhHHHHHHHHHHhhhc--CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008450 30 STMGIAVNLVTYLVGT--MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~--l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~ 107 (565)
.-.++..+++.|+.+. +|+++.+.+...+.+..+..+++.++++++||+ |+||++.++..+..++.++....+ .
T Consensus 155 ~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~~~~~~l~~~~~---~ 230 (310)
T TIGR01272 155 AEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLAVLLSIGAALTH---G 230 (310)
T ss_pred HHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHcC---C
Confidence 3445667799999753 799999999999999999999999999999999 999999888877777665444331 1
Q ss_pred cCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHH
Q 008450 108 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMA 187 (565)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg 187 (565)
.. ...+.++.|++.+..+|...++..+.+|++.. ++. ++. .+..+|.+++
T Consensus 231 ---------------------~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~-----~as--ai~-~~~~~Gg~i~ 280 (310)
T TIGR01272 231 ---------------------YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTS-----QGS--GIL-CLAIVGGAIV 280 (310)
T ss_pred ---------------------HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh-----hhH--HHH-HHHHhcchHH
Confidence 11 22355578999999999999999998886531 333 443 5567999999
Q ss_pred HHHHHHhcccccchhhHHHHHHH
Q 008450 188 VTVLVYIQDEISRSVGYGICSVA 210 (565)
Q Consensus 188 ~~i~g~l~~~~gw~~~f~i~~~~ 210 (565)
|.+.|.+.|..|.+..|++..++
T Consensus 281 P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 281 PLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHhccchHHHHHHHHH
Confidence 99999999999999888865544
No 183
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.87 E-value=1.1e-08 Score=106.40 Aligned_cols=150 Identities=15% Similarity=0.101 Sum_probs=109.4
Q ss_pred HHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHH-H-HHHHHHHHHHHhh
Q 008450 27 ERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA-V-QTLGTGMLAMVTK 104 (565)
Q Consensus 27 ~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~-~-~~~~~~~~a~~~~ 104 (565)
......++..+++.|+.+.+|++..+.+.+.+.+.++..++.+++|+++||..+||+....... . ..++.......
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 305 (379)
T TIGR00881 228 VYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLN-- 305 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcC--
Confidence 3344456667788999989999999999999999999999999999999986244443322111 1 11111111111
Q ss_pred hcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHH
Q 008450 105 LRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGT 184 (565)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~ 184 (565)
+. .+.....+..++.|....+..+....+..|.+|+++ |+++.++.+...++|.
T Consensus 306 -~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~ 359 (379)
T TIGR00881 306 -PA-------------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVGFFAYLGG 359 (379)
T ss_pred -cc-------------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHHHhhhhhh
Confidence 10 123445566666776666666666788899999998 9999999999999999
Q ss_pred HHHHHHHHHhcccccchhhH
Q 008450 185 LMAVTVLVYIQDEISRSVGY 204 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw~~~f 204 (565)
.++|.+.|++.+.+||+..|
T Consensus 360 ~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 360 ILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred hhhhhhHHHHHHhhcccccC
Confidence 99999999999999998765
No 184
>PRK10133 L-fucose transporter; Provisional
Probab=98.85 E-value=2.7e-08 Score=107.33 Aligned_cols=157 Identities=17% Similarity=0.155 Sum_probs=119.8
Q ss_pred hHHHHHHHhHHHHHHHHHHh-hhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYL-VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAM 101 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl-~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~ 101 (565)
..++.....++...++++|+ ++.+|+++.+.++....+.++..++++++|++.||+ |||+++..+..+..++..+..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~ 344 (438)
T PRK10133 266 AQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMALCLISAF 344 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555667788885 567899999999999999999999999999999999 9999998887776666555444
Q ss_pred HhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 102 VTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
. +. . ....+..+.|+|.+...|...+...+.++++ .+.+.++..+ ..
T Consensus 345 ~---~~---------------------~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~~-~~ 391 (438)
T PRK10133 345 A---GG---------------------H-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIVM-TI 391 (438)
T ss_pred c---CC---------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHhH-Hh
Confidence 3 11 1 1245667789999999999999999998764 3555665543 44
Q ss_pred HHHHHHHHHHHHhccccc-chhhHHHHHHHHHH
Q 008450 182 LGTLMAVTVLVYIQDEIS-RSVGYGICSVAMFM 213 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~ 213 (565)
+|..++|.+.|++.+..| -+..|++..++.+.
T Consensus 392 ~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~ 424 (438)
T PRK10133 392 IGGGIVTPVMGFVSDAAGNIPTAELIPALCFAV 424 (438)
T ss_pred ccchHHHHHHHHHHHhccchHHHHHHHHHHHHH
Confidence 678888899999999887 68888776555443
No 185
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.83 E-value=9.9e-08 Score=101.38 Aligned_cols=154 Identities=12% Similarity=0.010 Sum_probs=114.1
Q ss_pred HHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHH-HHHHHHHhhhc
Q 008450 28 RLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG-TGMLAMVTKLR 106 (565)
Q Consensus 28 ~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~-~~~~a~~~~~~ 106 (565)
..+.++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +|+ .+..+..+..+. .++....+
T Consensus 229 ~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~-~l~~~~~~~~~~~~~l~~~~~--- 303 (394)
T PRK10213 229 FAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKL-ALAGAPLVLAVSALVLTLWGS--- 303 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chh-HHHHHHHHHHHHHHHHHHHhh---
Confidence 344455555655555668899999999999999999999999999999996 544 444443443333 33333321
Q ss_pred ccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHH
Q 008450 107 QLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 186 (565)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~l 186 (565)
+.+.+.+..++.|++.+...+..++++.+..|++ +++..+......++|..+
T Consensus 304 ---------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~lg~~~ 355 (394)
T PRK10213 304 ---------------------DKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQVAVIQLANTC 355 (394)
T ss_pred ---------------------hHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHHHHHHHHHHHH
Confidence 2556777888899999999999998999888743 455566777778999999
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHHH
Q 008450 187 AVTVLVYIQDEISRSVGYGICSVAMFMA 214 (565)
Q Consensus 187 g~~i~g~l~~~~gw~~~f~i~~~~~~~~ 214 (565)
|+.++|++.+..|++..++..+++.++.
T Consensus 356 G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 356 GAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 9999999999999998888876554433
No 186
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.83 E-value=6.1e-08 Score=101.69 Aligned_cols=151 Identities=8% Similarity=0.081 Sum_probs=112.0
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
..++......+.|+.+++|.++.+.+++.+...++..++.++.|++.||+ |||+.+..+..+..++.+++.+....+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 297 (385)
T TIGR00710 220 GGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVSAVLLEITAILGL- 297 (385)
T ss_pred HHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 34455555667788888999999999999999999999999999999999 9999999888888887777665421110
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH-HHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL-GTLMA 187 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~lg 187 (565)
.....+.+..++.|+|.+...+.......|..| ++ ++++.++.+..... |.+.+
T Consensus 298 ------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~~~g~i~~ 352 (385)
T TIGR00710 298 ------------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTLRLVLGAIVG 352 (385)
T ss_pred ------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHHHHHHHHHHH
Confidence 124455666777899999988888888888876 45 88899988877654 56555
Q ss_pred HHHHHHhcccccchhhHHHH
Q 008450 188 VTVLVYIQDEISRSVGYGIC 207 (565)
Q Consensus 188 ~~i~g~l~~~~gw~~~f~i~ 207 (565)
+. .+.+.+..+|...+...
T Consensus 353 ~~-~~~~~~~~~~~~~~~~~ 371 (385)
T TIGR00710 353 YL-VSLIHGNTAWPMSLSCL 371 (385)
T ss_pred HH-HHhccccChHHHHHHHH
Confidence 55 44555555555444433
No 187
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.81 E-value=3.8e-08 Score=102.66 Aligned_cols=143 Identities=15% Similarity=0.046 Sum_probs=111.0
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+....+++...+++.|++ +.|.+..+.+.+.+.+.++..+++++.|+++||+.+||+++.++.++.+++.+++.+..+
T Consensus 208 ~~~~~~~~~~~~lp~~~~-~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (355)
T TIGR00896 208 LQSGLYYSLIGWLPAILI-SHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM- 285 (355)
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh-
Confidence 334556677778888886 479999999999999999999999999999999845666777777778777776665521
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
.... ...++.|++.|...|...+.+.+..++++. ++...++.+...++|.+
T Consensus 286 -----------------------~~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~~~~~~~~~ 336 (355)
T TIGR00896 286 -----------------------HGLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQ-----AAALSAMAQSIGYLLAA 336 (355)
T ss_pred -----------------------hHHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHH-----HHHHHHHHHHHHHHHHH
Confidence 1111 234678999999988888887776654331 68888888888889999
Q ss_pred HHHHHHHHhccccc
Q 008450 186 MAVTVLVYIQDEIS 199 (565)
Q Consensus 186 lg~~i~g~l~~~~g 199 (565)
+||.+.|++.++.|
T Consensus 337 ~gp~~~G~l~~~~g 350 (355)
T TIGR00896 337 LGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998776
No 188
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.81 E-value=1.6e-06 Score=92.28 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHH
Q 008450 57 VTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIAL 136 (565)
Q Consensus 57 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r 136 (565)
..+......+.+++++.+.|+. |.|..+.++...+..-.+.+-+. +-+.++++-
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~~-------------------------N~y~~yfss 109 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLFP-------------------------NSYYLYFSS 109 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHhc-------------------------chHHHHHHH
Confidence 5566777888999999999998 99999999988887765555443 367899999
Q ss_pred HHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 137 YLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 137 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
.+.|+|.+..+...-.++++..+++. +.+..++.......+.++|.++...
T Consensus 110 allG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l~~ 160 (461)
T KOG3098|consen 110 ALLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIILFI 160 (461)
T ss_pred HHhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhhee
Confidence 99999999999999999999988887 8888888888888887777554443
No 189
>TIGR00895 2A0115 benzoate transport.
Probab=98.81 E-value=3.2e-08 Score=103.90 Aligned_cols=137 Identities=12% Similarity=0.015 Sum_probs=107.1
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+....+++...+++ ++.+++|.+..+.+++.+...++..++.+++|+++||+ |||+.+.. ..+..+...+.....
T Consensus 261 ~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-~~~~~~~~~~~~~~~-- 335 (398)
T TIGR00895 261 MLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALL-LLLGAVFAVLVGSTL-- 335 (398)
T ss_pred HHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHH-HHHHHHHHHHHHHHh--
Confidence 33444555555555 66678899999999999999999999999999999999 98854443 333333333332210
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
+ +...+++..++.|++.++..+...+++.|.+|+++ |++++++......+|..
T Consensus 336 ~---------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ 388 (398)
T TIGR00895 336 F---------------------SPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGIGRLGAI 388 (398)
T ss_pred h---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHHHHHHHH
Confidence 1 24556778888999999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHh
Q 008450 186 MAVTVLVYI 194 (565)
Q Consensus 186 lg~~i~g~l 194 (565)
+||.++|++
T Consensus 389 ~g~~~~G~l 397 (398)
T TIGR00895 389 IGPILAGYL 397 (398)
T ss_pred HHHHhHHhc
Confidence 999999976
No 190
>PRK09848 glucuronide transporter; Provisional
Probab=98.80 E-value=1.8e-08 Score=108.84 Aligned_cols=155 Identities=15% Similarity=0.155 Sum_probs=117.9
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++....+.......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..++.++..+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i~~~~~~~~ 314 (448)
T PRK09848 236 GALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTCGYLLFFWV 314 (448)
T ss_pred HHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHc
Confidence 34445555555555666777778888766655555555677888999999999999 99999999998888887777654
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHh-hhhhcceeehhhHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE-KTQMAYFFSRFFFFIS 181 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~ 181 (565)
+. .+.+.+++..++.|+|.+...+...++.+|..|+++.++ ++++|..++.+.....
T Consensus 315 ---~~-------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~k 372 (448)
T PRK09848 315 ---SV-------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRK 372 (448)
T ss_pred ---Cc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHH
Confidence 11 135567777888999999999999999999988654221 2235888899999999
Q ss_pred HHHHHHHHHHHHhcccccc
Q 008450 182 LGTLMAVTVLVYIQDEISR 200 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw 200 (565)
+|..+|+.+.+.+.+..||
T Consensus 373 lg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 373 CGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHcCC
Confidence 9999999999987766555
No 191
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.80 E-value=4e-08 Score=104.60 Aligned_cols=152 Identities=9% Similarity=0.027 Sum_probs=111.8
Q ss_pred HHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 35 AVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 35 ~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
...++.|+++..+ ++.+.+++.+...++......+.+++.||..+.++.+..+.++..++..+.+.+++
T Consensus 228 ~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~---------- 296 (400)
T PRK11646 228 MLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSN---------- 296 (400)
T ss_pred HHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhh----------
Confidence 3456777766555 67888888888777666555555666654327677777787778877777766522
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
.+.+.+...+.++|.+...|...+++.|..|+++ |++.+++++...++|..+||.++|++
T Consensus 297 --------------~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 297 --------------LQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHH
Confidence 4456666778888888888999999999999998 99999999999999999999999999
Q ss_pred cccc---c-chhhHHHHHHHHHHHHHH
Q 008450 195 QDEI---S-RSVGYGICSVAMFMAIII 217 (565)
Q Consensus 195 ~~~~---g-w~~~f~i~~~~~~~~~~~ 217 (565)
.+.. + ....+++.++..++..+.
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 357 FDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 8764 2 345555555554444433
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.79 E-value=7.3e-08 Score=116.17 Aligned_cols=150 Identities=12% Similarity=0.131 Sum_probs=124.0
Q ss_pred HhHHHHHHHHHHhhhcCCCCch-hhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 30 STMGIAVNLVTYLVGTMHLPSA-TSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
..+....+++.|+.+.+|++.. +.+++.+.+.++.+++.+++|+++||+ ++++++.++.++.+++.++..+..
T Consensus 247 ~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~----- 320 (1146)
T PRK08633 247 ISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLALSLFLLPTAP----- 320 (1146)
T ss_pred HHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHHHHHHHHHHhh-----
Confidence 3445566788899989999999 999999999999999999999999999 999999888888887777776652
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
+.+.++++.++.|++.++..+...+++.+..|++. |++++++.++..++|.++++
T Consensus 321 -------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~~~~lg~~~~~ 375 (1146)
T PRK08633 321 -------------------SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNFLQNVGMLLFL 375 (1146)
T ss_pred -------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHHHHHHHHHHHH
Confidence 25667788899999999999999999999999998 99999999999999998888
Q ss_pred HHHHHhcc-cccchhhHHHHHHH
Q 008450 189 TVLVYIQD-EISRSVGYGICSVA 210 (565)
Q Consensus 189 ~i~g~l~~-~~gw~~~f~i~~~~ 210 (565)
.+++.+.. .+++...|.+.+.+
T Consensus 376 ~~~~~l~~~~~~~~~~~~~~~~~ 398 (1146)
T PRK08633 376 ALTTLFSGLGLSPAGLFYLIALV 398 (1146)
T ss_pred HHHHHHHHhccCHHHHHHHHHHH
Confidence 88776654 23455556554443
No 193
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.78 E-value=8.7e-08 Score=99.22 Aligned_cols=159 Identities=14% Similarity=0.178 Sum_probs=131.7
Q ss_pred HhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccC
Q 008450 30 STMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLR 109 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~ 109 (565)
+.-.+......|-..++|++..+...+.....+..+++++++|+|.||+ |-|+++.+++++..+.++..-+..
T Consensus 267 Gv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~~~~~~~~~~------ 339 (438)
T COG2270 267 GVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSIAALYLIFLE------ 339 (438)
T ss_pred hHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHHHHHHHHHcc------
Confidence 3445566677787889999999999999999999999999999999999 999999999999888777766551
Q ss_pred CCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHH
Q 008450 110 PRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVT 189 (565)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~ 189 (565)
+...+.+.-++.|...|+..++.-++.++..|+++ -+++++++......+..+||.
T Consensus 340 ------------------~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyaltgra~S~~gp~ 395 (438)
T COG2270 340 ------------------GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYALTGRAASFLGPF 395 (438)
T ss_pred ------------------ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhhhhhHHHHHHHH
Confidence 24557777788999999999999999999999999 899999999999999999999
Q ss_pred HHHHhccccc-chhhHHHHHHHHHHHHHHHH
Q 008450 190 VLVYIQDEIS-RSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 190 i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~ 219 (565)
..+.+.+..| -|..+....++..+.++++.
T Consensus 396 lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 396 LVAVITQITGSSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHHHHHhcchhhHHHHHHHHHHhhHhhEE
Confidence 9999887655 55565555445444444433
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.77 E-value=1.4e-07 Score=100.24 Aligned_cols=155 Identities=10% Similarity=-0.017 Sum_probs=116.3
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
......++.|+++.+|.++.+.|.+.+.+.++..++.++.+++.||+ ++|+++..++. ..+..++.++.+
T Consensus 222 ~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~~-------- 291 (393)
T PRK11195 222 ATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQH-------- 291 (393)
T ss_pred HHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHHh--------
Confidence 34445566788888999999999999999999999999999999998 99988877753 333333333331
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
+.+...+..++.|++.+...+...+.+.+..|++. .+|++++..+...++|..++..+.
T Consensus 292 ----------------~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 292 ----------------SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred ----------------HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHHHHHHH
Confidence 24556677778899999988888888877644432 168999999999999999999888
Q ss_pred HHhcccccchhhHHHHHHHHHHHHHHH
Q 008450 192 VYIQDEISRSVGYGICSVAMFMAIIIF 218 (565)
Q Consensus 192 g~l~~~~gw~~~f~i~~~~~~~~~~~~ 218 (565)
+.+ +.+|-+..+++.++..++...+.
T Consensus 351 ~~~-~~~~~~~~~~~~~~~~~~~~~~~ 376 (393)
T PRK11195 351 SLL-VKLGVPVVAVIVGFGLLVALAMA 376 (393)
T ss_pred HHH-HHcCCCHHHHHHHHHHHHHHHHH
Confidence 865 55777777776655555444443
No 195
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.74 E-value=1.1e-07 Score=114.55 Aligned_cols=172 Identities=13% Similarity=-0.072 Sum_probs=125.3
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+..+.+.++...++.|+.+.+|.+..+.+++.+.+.++..++.++.|+++|+. ++++.+..+.++..++.+.+++...
T Consensus 236 ~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~- 313 (1140)
T PRK06814 236 WFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGLFGLDLAFASS- 313 (1140)
T ss_pred HHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHHHHHHHHhccc-
Confidence 33344556677899999999999999999999999999999999999999988 7777666666666555544443200
Q ss_pred cccCCCCCCCCCccccc--CCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 106 RQLRPRPCKETATHTCE--QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~--~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
..... ......- -....+.+.+.++.++.|++.+...+...+++.+..|++. ||++++..+...++|
T Consensus 314 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~~~~~~~~~ 382 (1140)
T PRK06814 314 SVPAE-----PAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAANNVLNAAF 382 (1140)
T ss_pred ccccc-----cccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHHHHHHHHHH
Confidence 00000 0000000 0000134567788888999999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHhcc-cccchhhHHHHHHH
Q 008450 184 TLMAVTVLVYIQD-EISRSVGYGICSVA 210 (565)
Q Consensus 184 ~~lg~~i~g~l~~-~~gw~~~f~i~~~~ 210 (565)
..+|+++++.+.+ ..++...|.+.+++
T Consensus 383 ~~ig~~~~g~l~~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 383 MVAGTIILALLQALGFSIPWIILFIALA 410 (1140)
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 9999999998863 45666666655443
No 196
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.74 E-value=9.7e-08 Score=102.52 Aligned_cols=155 Identities=19% Similarity=0.164 Sum_probs=129.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..++..+++.......+.|+++.+|.+ ...+++...+.+++.++.+++++++||+ |+|+++..+.++.+++.++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~ 310 (428)
T PF13347_consen 233 AFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAALGFLLLFFL 310 (428)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHHHHHHHHHH
Confidence 666776777766777888888888887 5678888899999999999999999999 99999999999999999988887
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChH-hhhhhcceeehhhHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK-EKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~ 181 (565)
.. .+.+.+++..++.|++.+...+...++++|..+.++.+ .|++.|..++.+.....
T Consensus 311 ~~----------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k 368 (428)
T PF13347_consen 311 GP----------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIK 368 (428)
T ss_pred Hh----------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhH
Confidence 31 24788999999999999999999999999999876533 23346788888888899
Q ss_pred HHHHHHHHHHHHhcccccch
Q 008450 182 LGTLMAVTVLVYIQDEISRS 201 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~ 201 (565)
+|..+++.+.+.+.+..||.
T Consensus 369 ~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 369 IGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHHHHHHHHHhCcC
Confidence 99999999999887665554
No 197
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.74 E-value=1.3e-07 Score=102.62 Aligned_cols=169 Identities=15% Similarity=0.045 Sum_probs=114.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHH--------HHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTI--------AIFAAVQTL 94 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~--------~~~~~~~~~ 94 (565)
..++....++....++|.|+.+.+|++..+.+++.+...++..++.+++|+++||+ ++|+.. ..+......
T Consensus 269 ~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~ 347 (465)
T TIGR00894 269 AIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIFNGIGGLGP 347 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHHHHHHHHHH
Confidence 45666677788889999999999999999999999999999999999999999997 544321 111111111
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceee
Q 008450 95 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 174 (565)
Q Consensus 95 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (565)
+..+...... . .+....++...+.+.+.++..+.......|..|. . +|.+.+
T Consensus 348 ~~~~~~~~~~-~--------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g 399 (465)
T TIGR00894 348 GIFAYALPYL-S--------------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LGFIKG 399 (465)
T ss_pred HHHHHHHHHc-C--------------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HHHHHH
Confidence 1111111100 0 1133344444555555555555555555565554 5 899999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcccc---cchhhHHHHHHHHHHHHHHHHh
Q 008450 175 RFFFFISLGTLMAVTVLVYIQDEI---SRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 175 ~~~~~~~lg~~lg~~i~g~l~~~~---gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
+.+...++|..++|.+.|++.+.. +|+.+|.+.++..+++.++...
T Consensus 400 ~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 400 ITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred HHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 999999999999999999887643 4888888887776666555443
No 198
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.73 E-value=2.5e-07 Score=99.39 Aligned_cols=178 Identities=11% Similarity=0.050 Sum_probs=122.5
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
..+|.--+|.+...+++.|+++.++ ............+...+.+|++|+|+||+ |+||++.++.+...++.......
T Consensus 260 ly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~~~~~~l~ 336 (462)
T PRK15034 260 LYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIFSALLFLT 336 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHHHHHHHHH
Confidence 5666655667777789999887653 33222233445677889999999999999 99999999888777766443332
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCC------------C---hHhhh
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEK------------D---EKEKT 167 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~------------~---~~~~~ 167 (565)
+|. .+..+++.+.+..++..++.|.-..+...++.+.+|++ + ...|+
T Consensus 337 --lp~----------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~ 398 (462)
T PRK15034 337 --LPG----------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVT 398 (462)
T ss_pred --hcc----------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHH
Confidence 121 01134666666666666777777777888888888741 0 11233
Q ss_pred hhcceeehhhHHHHHHHHHHHHHHHHhcccc-cchhhHHHHHHHHHHHHHHHHhc
Q 008450 168 QMAYFFSRFFFFISLGTLMAVTVLVYIQDEI-SRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 168 ~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~-gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
+-|...++..+...+|..+-|.+.|...+.. ++...|+...+..+++..+.+..
T Consensus 399 ~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 399 ETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 4677888888888888888887777766654 48888888887777776665553
No 199
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1e-07 Score=93.17 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=120.5
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHH-HHHHHHHHHHHh
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV-QTLGTGMLAMVT 103 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~-~~~~~~~~a~~~ 103 (565)
.|.-..++=....-+.++++.+|+|+.+++.+.+.....+.+.+++.|.++||+ |++-..+.+..+ ..++..+..++
T Consensus 274 v~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a~~~tl~~H~~l~Ft- 351 (459)
T KOG4686|consen 274 VLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASACILTLLGHSGLFFT- 351 (459)
T ss_pred HHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHHHHHHHHHhhhHHhh-
Confidence 333344444455567889999999999999999999999999999999999999 999877766554 44466666665
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
++.-+++..+.|+..+....+.-++++...|+++ .|++++..+...|+|
T Consensus 352 -------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTaygf~qsIqNLg 400 (459)
T KOG4686|consen 352 -------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAYGFIQSIQNLG 400 (459)
T ss_pred -------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchHHHHHHHHhhh
Confidence 3445667778899988887788899999999999 999999999999999
Q ss_pred HHHHHHHHHHhccccc---chhhHHH
Q 008450 184 TLMAVTVLVYIQDEIS---RSVGYGI 206 (565)
Q Consensus 184 ~~lg~~i~g~l~~~~g---w~~~f~i 206 (565)
-++.|++.|.+.++-| |--+|.+
T Consensus 401 la~i~Iiag~i~d~~g~y~~le~ffl 426 (459)
T KOG4686|consen 401 LAFIPIIAGFIADGDGSYDNLEAFFL 426 (459)
T ss_pred hhHHhhhhheeecCCCchhhHHHHHH
Confidence 9999999999998765 4344443
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.69 E-value=2e-07 Score=102.32 Aligned_cols=160 Identities=14% Similarity=0.098 Sum_probs=101.6
Q ss_pred HhHHHHHHHHHHhhhcCCCCchhhhh------------HHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHH
Q 008450 30 STMGIAVNLVTYLVGTMHLPSATSAN------------IVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 97 (565)
Q Consensus 30 ~~~~~~~~l~~yl~~~l~~s~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 97 (565)
.+|++..+++.++ ++.|++..+.+. ......++..++.+++++++||+ |||++++++..+.+++..
T Consensus 303 ~~y~~~~~~p~i~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~~~~~~~~ 380 (502)
T TIGR00887 303 AFYGVNLNQKVIL-SAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFFILTVLFF 380 (502)
T ss_pred HHHccccccHHHH-HHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHHHHHHHHH
Confidence 3444444455555 466776543221 12233445566788899999999 999999988888777766
Q ss_pred HHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh
Q 008450 98 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 177 (565)
Q Consensus 98 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (565)
+.++.....+ ....+....+....+..+..+....+.+|.+|.+. |+++.++.+
T Consensus 381 ~l~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g~~~ 434 (502)
T TIGR00887 381 VLGFAYNHLS--------------------THGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHGISA 434 (502)
T ss_pred HHHHHHHhcc--------------------hhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHHHHH
Confidence 6655421000 00111111111222222334566677899999999 999999999
Q ss_pred HHHHHHHHHHHHHHHHhccc----------ccchhhHHHHHHHHHHHHHH
Q 008450 178 FFISLGTLMAVTVLVYIQDE----------ISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 178 ~~~~lg~~lg~~i~g~l~~~----------~gw~~~f~i~~~~~~~~~~~ 217 (565)
....+|.+++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 435 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 435 ASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999988773 34455677666665555443
No 201
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.68 E-value=5.5e-08 Score=106.12 Aligned_cols=166 Identities=16% Similarity=0.206 Sum_probs=138.0
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcccc--chhHHHHHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG--RYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.+..++++.....++.|.. +.+++..+++.++++..+...+++++.|+++|+. . ++.+..++++..++....+++.
T Consensus 308 ~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~gl~~~~~p~~ 385 (509)
T KOG2504|consen 308 LFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIAGLARLFLPFA 385 (509)
T ss_pred HHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHHHHHHHHHHHh
Confidence 3444566666667777765 8999999999999999999999999999999998 6 3444555555566666556555
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
+ ++..+.+.-.+.|++.|.+.+..+..+.|..+.++ ...++++......+
T Consensus 386 ~------------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l~~~gi 435 (509)
T KOG2504|consen 386 T------------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLLLFQGI 435 (509)
T ss_pred c------------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHHHHhHH
Confidence 2 27789999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHHHHHHhccccc-chhhHHHHHHHHHHHHHHHHhcc
Q 008450 183 GTLMAVTVLVYIQDEIS-RSVGYGICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~~~~~~ 222 (565)
+.++||++.|++.+..+ |...|+..++..+++..+.++..
T Consensus 436 ~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 436 GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999888 99999999988887776655544
No 202
>PRK11043 putative transporter; Provisional
Probab=98.63 E-value=6.4e-07 Score=95.07 Aligned_cols=148 Identities=9% Similarity=-0.039 Sum_probs=108.0
Q ss_pred HHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhccc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQL 108 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~ 108 (565)
..++.....++.|++ ++|++..+.++....+.++..++..+++++.||+ |+|+.+.......+++.+.+......+.
T Consensus 217 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 293 (401)
T PRK11043 217 AAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIWLASLLSH- 293 (401)
T ss_pred HHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 344555566677765 5899999999988888889999999999999999 9999877766666555444333211111
Q ss_pred CCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHH
Q 008450 109 RPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAV 188 (565)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~ 188 (565)
.....+.+...+.|++.+...|.......+..|+ + ++++.++++.....+...++
T Consensus 294 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~~~~~~~~~~~~ 348 (401)
T PRK11043 294 ------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQNTLQLGLCFLAS 348 (401)
T ss_pred ------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHHHHHHHHHHHHH
Confidence 1244555667778889999889888888887764 5 89999999988888888888
Q ss_pred HHHHHhcccccchhhH
Q 008450 189 TVLVYIQDEISRSVGY 204 (565)
Q Consensus 189 ~i~g~l~~~~gw~~~f 204 (565)
.+.|.+.+.......+
T Consensus 349 ~~~g~l~~~~~~~~~~ 364 (401)
T PRK11043 349 LLVSALISTPLLTTGS 364 (401)
T ss_pred HHHHHccCCChhHHHH
Confidence 8888887654444433
No 203
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.62 E-value=7e-07 Score=94.48 Aligned_cols=138 Identities=12% Similarity=0.023 Sum_probs=92.5
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
...+.|+.+++|++..+.+.+.+...+...++.++.|++.||+ |||+++.++..+..++.++..+...
T Consensus 224 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~----------- 291 (392)
T PRK10473 224 NTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSPS----------- 291 (392)
T ss_pred HhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 3345677788999999999999999999999999999999999 9999999999888888777776522
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
.........+.+.|.+...+.. +..+..|.++ |+ +.......++..+|+.+++++.
T Consensus 292 -------------~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~------~~---g~~~~~~~~~~~~g~~~~~~l~ 347 (392)
T PRK10473 292 -------------HAVSLFGITLICAGFSVGFGVA--MSQALGPFSL------RA---GVASSTLGIAQVCGSSLWIWLA 347 (392)
T ss_pred -------------HHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcc------cc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 2223333333333333322222 2233334433 33 3334455677777888888888
Q ss_pred ccccchhhHHHHHH
Q 008450 196 DEISRSVGYGICSV 209 (565)
Q Consensus 196 ~~~gw~~~f~i~~~ 209 (565)
+..|+.....+.+.
T Consensus 348 ~~~g~~~~~~~~~~ 361 (392)
T PRK10473 348 AVLGISAWNMLIGI 361 (392)
T ss_pred HHhccchhHHHHHH
Confidence 77777654444443
No 204
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.61 E-value=4.1e-08 Score=102.43 Aligned_cols=145 Identities=17% Similarity=0.224 Sum_probs=119.2
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
.++++....+..+++.|+.+.+.|++.||+. +.+|..+..++.+.-++. ..
T Consensus 70 ~Gll~~vf~v~~~i~sPl~gyLadryNR~~v----------~~vG~~iW~~Av~~~~fs-------------------~~ 120 (493)
T KOG1330|consen 70 LGLLQTVFIVVFMIASPLFGYLADRYNRKRV----------IAVGIFIWTLAVFASGFS-------------------NH 120 (493)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhcCcceE----------EeeHHHHHHHHHHHHHHH-------------------HH
Confidence 4566777788889999999999888887744 788888888888877764 25
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
+|.+.+.-.+.|+||+...|..+.++.|.+|++.|++..++++++..+|+.+|-..++.+...+. .|
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W-------- 187 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW-------- 187 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce--------
Confidence 66678888999999999999999999999999999999999999999999998888877754321 13
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 008450 515 RLDLFYGLLAILSIINLVIYLICAVWYKP 543 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~~~~~~ 543 (565)
.+.|.+.+++.++..++.+++.++-.+
T Consensus 188 --r~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 188 --RWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred --EEEEEeehHHHHHHHHHHHhhccCccc
Confidence 456788999999988888887766543
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.60 E-value=2.4e-07 Score=96.65 Aligned_cols=137 Identities=15% Similarity=0.110 Sum_probs=106.3
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHH-HHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFM-GTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
.++....++.....+++|+.+ +|+++.+.+.+.+.+. ++..++.+++|+++||+ |||+.+.++.++..++..+..+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~~~~~~~~ 295 (356)
T TIGR00901 218 IVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALTNAGFVWL 295 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456667778889999886 9999999998888776 57889999999999999 99999998888887776655543
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
.+ + . ||.++. ..+.+.+..+.++.+++.+...+...+++.+.+|+++ |++.+++++...+
T Consensus 296 ~~--~--------~-~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~ 355 (356)
T TIGR00901 296 AS--N--------G-HHDGIT--FPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSLSA 355 (356)
T ss_pred Hh--c--------C-cccccc--cchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHHHh
Confidence 11 0 0 000011 1235667778888999999999999999999999999 9999998877655
No 206
>TIGR00898 2A0119 cation transport protein.
Probab=98.58 E-value=7e-07 Score=97.87 Aligned_cols=132 Identities=13% Similarity=-0.017 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHH
Q 008450 58 TDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALY 137 (565)
Q Consensus 58 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~ 137 (565)
....+....+.+++++++||+ |||+++.++.++.+++.++..+..+ .......+..+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~~~----------------------~~~~~~~~~~~ 418 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFVPV----------------------DLYFLRTALAV 418 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHcCC----------------------CchHHHHHHHH
Confidence 344566778888999999999 9999999998888888777766521 11233445555
Q ss_pred HHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Q 008450 138 LIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 138 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
+.+++.++..+....+..|.+|++. |+.++++.+....+|.+++|.+.+ + ...++..++.+.+++.+++.++
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHH
Confidence 6667777777888899999999998 999999999999999999999988 4 3456777887777666655554
Q ss_pred HHh
Q 008450 218 FLA 220 (565)
Q Consensus 218 ~~~ 220 (565)
.++
T Consensus 491 ~~~ 493 (505)
T TIGR00898 491 TLF 493 (505)
T ss_pred HHc
Confidence 444
No 207
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.57 E-value=1.6e-07 Score=96.93 Aligned_cols=132 Identities=23% Similarity=0.239 Sum_probs=112.6
Q ss_pred HHhHHHHHHHHHHhhhcCCCC-chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc
Q 008450 29 LSTMGIAVNLVTYLVGTMHLP-SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ 107 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~~l~~s-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~ 107 (565)
+.+.....+++.|+.+.+|.+ ..+.+++.+...+...++.++.|+++||+ |+|+...+......++.+...+....
T Consensus 220 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-- 296 (352)
T PF07690_consen 220 FVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLILGALGLLLLPFS-- 296 (352)
T ss_dssp HHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHHCCSHHH--
T ss_pred HHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 456667788888889999999 79999999999999999999999999998 99888888777777776666554221
Q ss_pred cCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHH
Q 008450 108 LRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMA 187 (565)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg 187 (565)
.+.....+..++.|++.+...+....++.|..|+++ |+++.++.+...++|..+|
T Consensus 297 -------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 297 -------------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNSIGSLGGIIG 351 (352)
T ss_dssp -------------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHHHHHHHHHHH
T ss_pred -------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHC
Confidence 135566678888999999999999999999999988 9999999999999999998
Q ss_pred H
Q 008450 188 V 188 (565)
Q Consensus 188 ~ 188 (565)
|
T Consensus 352 P 352 (352)
T PF07690_consen 352 P 352 (352)
T ss_dssp H
T ss_pred C
Confidence 7
No 208
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.57 E-value=1.8e-06 Score=90.93 Aligned_cols=158 Identities=11% Similarity=-0.049 Sum_probs=106.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccch---hHHH-HHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRY---KTIA-IFAAVQTLGTGM 98 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~~~-~~~~~~~~~~~~ 98 (565)
..+|....+|++..+++.|+.+ .|++.. .+.......+...++ .++++||. .|| +... ...+..++...+
T Consensus 200 ~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~~~a~~~~~ 273 (368)
T TIGR00903 200 ILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAALLIAAFFLA 273 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHHHHHHHHHH
Confidence 5777888999999999999964 677754 555555544444444 57888876 543 3322 233333333333
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
.+... +.....+...+.+++.....+...++.+|.+|++. |+++.++.+.
T Consensus 274 ~~~~~------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G~~~~ 323 (368)
T TIGR00903 274 LAFEL------------------------NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAGAIGF 323 (368)
T ss_pred HHHcc------------------------ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccchhhH
Confidence 33221 12233445556667777777778899999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Q 008450 179 FISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIF 218 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~ 218 (565)
..++|.+++|.+.+.+.. +.+..|.+.++..+++.+..
T Consensus 324 ~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 324 TSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 999999999998887763 66677777666655554443
No 209
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.56 E-value=1.2e-06 Score=89.00 Aligned_cols=161 Identities=15% Similarity=0.093 Sum_probs=127.8
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
..++.+|.++.++|.++. +.|+|..+.|++.+...+.+....+..-++++|...+|+........+.+|...+.+.
T Consensus 219 lqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~--- 294 (395)
T COG2807 219 LQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLA--- 294 (395)
T ss_pred hhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHh---
Confidence 456788999999999987 6799999999999999999999999999999988788888888888899998888877
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTL 185 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 185 (565)
|. +-..+. -+++|+|.|+.+|....++.+..++.++ -++..+.-+-...+=+.
T Consensus 295 P~--------------------~~~~lw--~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSgmaQg~GYllAa 347 (395)
T COG2807 295 PG--------------------QLPILW--ALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSGMAQGVGYLLAA 347 (395)
T ss_pred hh--------------------hHHHHH--HHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHHHhhhhhHHHHh
Confidence 32 122222 4889999999999999999999887662 45555555555556677
Q ss_pred HHHHHHHHhccccc-chhhHHHHHHHHHHHHHH
Q 008450 186 MAVTVLVYIQDEIS-RSVGYGICSVAMFMAIII 217 (565)
Q Consensus 186 lg~~i~g~l~~~~g-w~~~f~i~~~~~~~~~~~ 217 (565)
.||.+.|++-|..| |+...+......+...+.
T Consensus 348 ~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 348 FGPWLFGFLHDATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred hhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 88999999998765 887777665554444333
No 210
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.56 E-value=1.7e-06 Score=90.68 Aligned_cols=134 Identities=8% Similarity=-0.007 Sum_probs=91.5
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPR 111 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 111 (565)
+......+.++.+.+|+++.+.+++.+...++..++.+++|+++||+ |||+++.++..+..+..+........+
T Consensus 211 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~~~~----- 284 (377)
T PRK11102 211 FSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMGIWLVVSALLD----- 284 (377)
T ss_pred HHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 33344455677778899999999999999999999999999999999 999999988876555433332221101
Q ss_pred CCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH-HHHHHHHHHH
Q 008450 112 PCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI-SLGTLMAVTV 190 (565)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~lg~~lg~~i 190 (565)
...+.+.++..+.+.+.+...+.....+.|..| ++ ++++.+...... .+|..+|+.+
T Consensus 285 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 285 ---------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred ---------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 123444455555555566666666677777766 45 788887765543 4667777665
Q ss_pred HHH
Q 008450 191 LVY 193 (565)
Q Consensus 191 ~g~ 193 (565)
++.
T Consensus 343 ~~~ 345 (377)
T PRK11102 343 SLA 345 (377)
T ss_pred Hhc
Confidence 543
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=98.50 E-value=7.4e-07 Score=96.17 Aligned_cols=128 Identities=13% Similarity=0.123 Sum_probs=96.0
Q ss_pred hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHH
Q 008450 51 ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMG 130 (565)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (565)
...+.+.....+...++.+++++++||+ |+|+.+..+.+..+++.+...+. +. .+.+
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~ 320 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVILSALIFFI---PP-------------------SNVW 320 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh---Cc-------------------chHH
Confidence 3344555666778888899999999999 99999998877666544433332 11 2466
Q ss_pred HHHHHHHHHHHhccccccchhhhhhccCCCCChH-hhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccch
Q 008450 131 VLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK-EKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRS 201 (565)
Q Consensus 131 ~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~ 201 (565)
.+++..++.|++.++..+...++++|..+.++.+ -++..|..++.+.....+|..+|+.++|++.+..||.
T Consensus 321 ~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 321 LIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6788888999999999999999999999855422 1222456677888888999999999999988877763
No 212
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.47 E-value=3.1e-06 Score=74.48 Aligned_cols=132 Identities=22% Similarity=0.296 Sum_probs=95.0
Q ss_pred hhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHH
Q 008450 362 FVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQ 441 (565)
Q Consensus 362 ~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~ 441 (565)
..+..++..++.+++.|+..+| +.+..+..+..++....... .+.+...+.
T Consensus 7 ~~~~~~~~~~~~g~~~d~~g~~----------~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 57 (141)
T TIGR00880 7 YALGQLIYSPLSGLLTDRFGRK----------PVLLVGLFIFVLSTAMFALS-------------------SNITVLIIA 57 (141)
T ss_pred ehhHHHHHHhhHHHHHhhcchh----------HHHHHHHHHHHHHHHHHHHh-------------------ccHHHHHHH
Confidence 3455566777777776665544 23555666666665554432 244556677
Q ss_pred HHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHH
Q 008450 442 FFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYG 521 (565)
Q Consensus 442 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~ 521 (565)
.++.+++.....+..+.++.|..|++.|++.+++.+....+|..+++.+.+.+.+. .+ +...|+
T Consensus 58 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~----------~~~~~~ 121 (141)
T TIGR00880 58 RFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF------LG----------WRAPFL 121 (141)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc------cc----------hHHHHH
Confidence 88899999988999999999999999999999999999999999999999887521 12 245667
Q ss_pred HHHHHHHHHHHHHhhhh
Q 008450 522 LLAILSIINLVIYLICA 538 (565)
Q Consensus 522 ~~a~l~lv~~~~~~~~~ 538 (565)
+.+++.++..+..+...
T Consensus 122 ~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 122 FLAILALAAFILLAFLL 138 (141)
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 77777777666655543
No 213
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.43 E-value=2.9e-06 Score=91.13 Aligned_cols=180 Identities=12% Similarity=0.086 Sum_probs=127.4
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
+.++.+++-......-...+-++-|++..++.+.+........++.+++.++.||+ |||+.++++.....+..+++...
T Consensus 277 v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~~~~~~~~ 355 (485)
T KOG0569|consen 277 VSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVALLLMSIA 355 (485)
T ss_pred HHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHH
Confidence 44444554444444455556667899999999999999999999999999999999 99999999999999988887776
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccc-cccchhhhhhccCCCCChHhhhhhcceeehhhHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGG-LKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS 181 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 181 (565)
..+.+ ..+++-.+...++.++..++.+. ..|...-+.+|.+|++. |..++++-.....
T Consensus 356 ~~l~~---------------~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~~~~~~w 414 (485)
T KOG0569|consen 356 LFLSN---------------SFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSVATAVNW 414 (485)
T ss_pred HHHHH---------------HhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHHHHHHHH
Confidence 43322 01111122233444443333222 34788889999999999 9999999888888
Q ss_pred HHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccccc
Q 008450 182 LGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKRY 225 (565)
Q Consensus 182 lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~ 225 (565)
+...+-......+.+..|- ..|.+..+.+++..+..++..|+.
T Consensus 415 ~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 415 LSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred HHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 7777766677777777774 566666666666666666655544
No 214
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.41 E-value=1.1e-05 Score=78.46 Aligned_cols=92 Identities=21% Similarity=0.248 Sum_probs=70.3
Q ss_pred HHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcc
Q 008450 40 TYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATH 119 (565)
Q Consensus 40 ~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 119 (565)
.|+-.++|+...|+|.+.-+-...+++...+.|-|+|+- |||+..+.-.+.++ ++.+..
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycitYi----LsCiTK---------------- 119 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCITYI----LSCITK---------------- 119 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHHHH----HHHHhh----------------
Confidence 455567899999999999988889999999999999998 99997665444444 443332
Q ss_pred cccCCcchhHHHHHHHHHHHHHhccccccchhhh-hhcc
Q 008450 120 TCEQASGFQMGVLYIALYLIALGTGGLKSSVSGF-GTDQ 157 (565)
Q Consensus 120 ~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~-~~~~ 157 (565)
+..++-.+.++|.+-|+.++..+.+..+. ++|+
T Consensus 120 -----hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEH 153 (454)
T KOG4332|consen 120 -----HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEH 153 (454)
T ss_pred -----cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHh
Confidence 22347779999999999999988777664 3444
No 215
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.38 E-value=1.5e-06 Score=89.12 Aligned_cols=147 Identities=21% Similarity=0.205 Sum_probs=123.9
Q ss_pred CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcce
Q 008450 354 PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV 433 (565)
Q Consensus 354 ~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (565)
..+++.+...+.-++..|+++.++++++.|. .+.+|+.++..+.+++++. .
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~i----------pm~~Gl~vmf~sTilFafg-------------------~ 157 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKI----------PMVAGLFVMFLSTILFAFG-------------------N 157 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhcccc----------HHHHHHHHHHHHHHHHHHc-------------------c
Confidence 4556667777888888899888888777763 3899999999999999884 4
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchh-hHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccc
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGM-KTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNIN 512 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~-rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~ 512 (565)
+++.++++-.+.|+|.+...+...+++.+.+|++. ||+++|+.....++|..+||.+++.++...+
T Consensus 158 sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G------------- 224 (464)
T KOG3764|consen 158 SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG------------- 224 (464)
T ss_pred hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-------------
Confidence 66688999999999999999999999999999886 6999999999999999999999999986543
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 513 RGRLDLFYGLLAILSIINLVIYLICAVWYKPKK 545 (565)
Q Consensus 513 ~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~ 545 (565)
+...|.++++++++..++-+++.+.++...
T Consensus 225 ---k~aPFlVL~~v~Lld~~L~l~vi~p~~~~~ 254 (464)
T KOG3764|consen 225 ---KSAPFLVLAIVLLLDGALQLLVIEPTEMDP 254 (464)
T ss_pred ---CcCcHHHHHHHHHHHHHHHHheeCccccCc
Confidence 345699999999999988888776654443
No 216
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.38 E-value=4.8e-06 Score=88.51 Aligned_cols=161 Identities=11% Similarity=0.067 Sum_probs=120.8
Q ss_pred HHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 34 IAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 34 ~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
...+...|+++.-|.+....+.+.+.-.+.-...-.+.+++..|+ |.|+++.++.+..++=..+.+...+ |.
T Consensus 226 ~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~~l~a~~~~-~~------ 297 (400)
T PF03825_consen 226 YYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRWLLYAYFSD-PW------ 297 (400)
T ss_pred HHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHhcC-Cc------
Confidence 345567787644447777778777777778888888999999999 9999999999999988777777622 11
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH-HHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI-SLGTLMAVTVLV 192 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~lg~~lg~~i~g 192 (565)
.........+..+.|+..|.+..+...++.+..|++. |+++.+++.... .+|.++|..++|
T Consensus 298 ------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 298 ------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred ------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 0012223444567999999999999999999999999 999999988875 699999999999
Q ss_pred Hhcccccchhh------HHHHHHHHHHHHHHHHh
Q 008450 193 YIQDEISRSVG------YGICSVAMFMAIIIFLA 220 (565)
Q Consensus 193 ~l~~~~gw~~~------f~i~~~~~~~~~~~~~~ 220 (565)
++.+.+|-+.. +.+.++..++..+++..
T Consensus 360 ~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 360 WLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99998775543 34444444444444333
No 217
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.36 E-value=2e-05 Score=84.36 Aligned_cols=140 Identities=11% Similarity=0.155 Sum_probs=103.0
Q ss_pred hhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeeh
Q 008450 357 SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVF 436 (565)
Q Consensus 357 ~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 436 (565)
+...+..+...+..++.+.+.|++.|| +.+..+.++..++.+...+ ..+..
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr----------~~l~~~~~~~~~~~~~~~~-------------------a~~~~ 105 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRR----------PVLITGALIFTLACAATLF-------------------TTSMT 105 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCch----------HHHHHHHHHHHHHHHHHHH-------------------cCCHH
Confidence 344445566667777888888877766 2366677777776665554 33566
Q ss_pred hhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchh
Q 008450 437 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 516 (565)
Q Consensus 437 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~ 516 (565)
.+++.-++.|++++...+..+.++.|..|++.+++.+++.+....+|..+|+.+++.+... .+|
T Consensus 106 ~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~------~gw---------- 169 (413)
T PRK15403 106 QFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF------VHW---------- 169 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCH----------
Confidence 7778889999998877777788888999999999999999999999999999998876531 233
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 517 DLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 517 ~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
.+.|++.+++.++..+..+...++.
T Consensus 170 ~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 170 KVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 5678888888777766555545554
No 218
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.34 E-value=7.2e-06 Score=81.22 Aligned_cols=141 Identities=23% Similarity=0.275 Sum_probs=111.8
Q ss_pred hhhcCCCCc--hhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcc
Q 008450 42 LVGTMHLPS--ATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATH 119 (565)
Q Consensus 42 l~~~l~~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 119 (565)
...+++.+. .+.++..+.+.+...+..++.|+++||+ |||+.+..+.....++.+++++..+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~--------------- 91 (338)
T COG0477 28 LLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN--------------- 91 (338)
T ss_pred HHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc---------------
Confidence 344555555 4789999999999999999999999999 9998888888776666566665522
Q ss_pred cccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCC-CChHhhhhhcceeehhhH-HHHHHHHHHHHHHHHhccc
Q 008450 120 TCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDE-KDEKEKTQMAYFFSRFFF-FISLGTLMAVTVLVYIQDE 197 (565)
Q Consensus 120 ~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~lg~~lg~~i~g~l~~~ 197 (565)
.....+.+.|+.+|++.+...+...+++.|.+|+ ++ |+...+.... ...+|..+++.+++.+...
T Consensus 92 -------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 92 -------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred -------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2378899999999999999999999999999988 44 8888888888 5788889998887776654
Q ss_pred --ccchhhHHHHHHHH
Q 008450 198 --ISRSVGYGICSVAM 211 (565)
Q Consensus 198 --~gw~~~f~i~~~~~ 211 (565)
.+|++.|.+.....
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 159 LLWGWRAAFLLAALLG 174 (338)
T ss_pred HhcchHHHHHHHHHHH
Confidence 57888666655443
No 219
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.33 E-value=0.00079 Score=70.84 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=86.7
Q ss_pred hhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHH
Q 008450 54 ANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLY 133 (565)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (565)
+.+..+-.+-+.+.-+.+-|..+|+ --+.=+.++.++..+|.++.+++.+ .+.=+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~~~------------------------v~~~l 116 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFSPS------------------------VWVRL 116 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeeccc------------------------hhHHH
Confidence 4466666677888888888999987 5454455566778888888888732 56677
Q ss_pred HHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc-cccchhhHHHHHHHHH
Q 008450 134 IALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD-EISRSVGYGICSVAMF 212 (565)
Q Consensus 134 i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~-~~gw~~~f~i~~~~~~ 212 (565)
++-.+.+++.|.-..+..++.. .+++.. .+.+..+...++++|...--.+.. ..+.|..+.+..++.+
T Consensus 117 ~Gv~las~ssg~GE~tfL~lt~-~y~~~~----------l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~ 185 (402)
T PF02487_consen 117 LGVVLASLSSGLGEVTFLSLTH-FYGKSS----------LSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPA 185 (402)
T ss_pred HHHHHHhhhhhhhHHHHHHHHH-hcCccc----------cccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHH
Confidence 8888899999998888888755 454332 455555666667777654444444 2334666666555544
Q ss_pred HHHHHHHhcc
Q 008450 213 MAIIIFLAGT 222 (565)
Q Consensus 213 ~~~~~~~~~~ 222 (565)
+-++.+++..
T Consensus 186 ~~~~~~f~~L 195 (402)
T PF02487_consen 186 IFLLSYFFLL 195 (402)
T ss_pred HHHHHHHHhh
Confidence 4444444443
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.33 E-value=1.2e-05 Score=85.22 Aligned_cols=137 Identities=12% Similarity=0.006 Sum_probs=98.4
Q ss_pred HHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCC
Q 008450 37 NLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKET 116 (565)
Q Consensus 37 ~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 116 (565)
..+.|+++.+|.+..+.+++......+..++.++.+++.||+ +++... ......++.+.........
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~---------- 295 (394)
T PRK11652 229 CSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFG---------- 295 (394)
T ss_pred hChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhc----------
Confidence 345677777999999999998888888999999999999998 743332 2222222222221110000
Q ss_pred CcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 117 ATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 117 ~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
..+.+.+.++.++.++|.+...|....+..|.+|+ + ++...++.....++|..+++.+++++..
T Consensus 296 ---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 296 ---------VMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred ---------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 01245677778889999999999999999998874 4 7888899998899999999999998876
Q ss_pred cccchh
Q 008450 197 EISRSV 202 (565)
Q Consensus 197 ~~gw~~ 202 (565)
...+..
T Consensus 360 ~~~~~~ 365 (394)
T PRK11652 360 TGQFSL 365 (394)
T ss_pred CchHHH
Confidence 544433
No 221
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.31 E-value=6.9e-06 Score=87.80 Aligned_cols=154 Identities=12% Similarity=0.057 Sum_probs=110.8
Q ss_pred HHHHHHhHHHHHHHHHHhhhc-CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 25 LCERLSTMGIAVNLVTYLVGT-MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~-l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
++.-....+..++++.|+.+. .+.+....+...+.+.....++++++|+++||+ ++||++.++.+...+..++..+.+
T Consensus 242 f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~~~ll~~~~~ 320 (410)
T TIGR00885 242 FFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMALCLGSIFAG 320 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333333335556678887643 255555556677777888999999999999999 999999888888777777766641
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLG 183 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg 183 (565)
. . ...++..+.|+..+..+|+..++..+..+++. . .+.+...+ ..+|
T Consensus 321 ~------------------------~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~-~~s~~l~~-~~~G 367 (410)
T TIGR00885 321 G------------------------H-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------K-YGAAGLVM-AIIG 367 (410)
T ss_pred C------------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------h-hhHHHHHH-HHhc
Confidence 1 1 23566777888999999999999999987654 2 22333333 3499
Q ss_pred HHHHHHHHHHhcccc------cchhhHHHHHHHHH
Q 008450 184 TLMAVTVLVYIQDEI------SRSVGYGICSVAMF 212 (565)
Q Consensus 184 ~~lg~~i~g~l~~~~------gw~~~f~i~~~~~~ 212 (565)
.++.|.+.|++.|.. +.+..|+++.++.+
T Consensus 368 ga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 368 GGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred cchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 999999999999954 58888887765544
No 222
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.30 E-value=0.00021 Score=75.22 Aligned_cols=155 Identities=15% Similarity=0.066 Sum_probs=108.9
Q ss_pred HHHHHHhhhc-CCCCchhhhh-HHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 36 VNLVTYLVGT-MHLPSATSAN-IVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 36 ~~l~~yl~~~-l~~s~~~~~~-~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
+++.+|+.+. .|++..|... +.-...-.....-++...+.|.. |.|++++++.+...+...++.+.++
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~~s--------- 93 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFGTS--------- 93 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHCc---------
Confidence 4578899886 8999988763 34445556667778889999998 9999999999988888888888744
Q ss_pred CCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 114 KETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
...+-+.-+..|++.+.. .+..+++=...|+++ =-++.+......-+|-.++.++|-.
T Consensus 94 ---------------v~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQl 151 (412)
T PF01770_consen 94 ---------------VLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQL 151 (412)
T ss_pred ---------------HHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556777888888887764 555566666666655 3344555666666676776665554
Q ss_pred hcc--cccchhhHHHHHHHHHHHHHHHHhcc
Q 008450 194 IQD--EISRSVGYGICSVAMFMAIIIFLAGT 222 (565)
Q Consensus 194 l~~--~~gw~~~f~i~~~~~~~~~~~~~~~~ 222 (565)
+.. ..++...+++......+++++.++++
T Consensus 152 lvs~~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 152 LVSFGGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 443 44577777777666666666655543
No 223
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.29 E-value=2.2e-05 Score=81.85 Aligned_cols=112 Identities=17% Similarity=0.149 Sum_probs=84.4
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
.++......+...+..++.+++.|++.+| +.+.++.++..++.+...+.. .+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r----------~~~~~~~~~~~i~~~~~~~~~------------------~~ 90 (366)
T TIGR00886 39 LGNLVAVPVLAGAVLRIILGFLVDKFGPR----------YTTTLSLLLLAIPCLWAGLAV------------------QS 90 (366)
T ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHhCch----------HHHHHHHHHHHHHHHHHHHHh------------------hh
Confidence 45566667777788888889888877766 236778888888877766531 14
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
++.+++..++.|++... .+....++.+..|++.|++.+++......+|..+++.+.+.+.
T Consensus 91 ~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 91 YSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 55566677888887554 4566788999999999999999999888888888888776654
No 224
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.27 E-value=3.7e-06 Score=91.60 Aligned_cols=142 Identities=14% Similarity=0.053 Sum_probs=102.8
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
.+.|++..++ +....+++.+...++..++.++.++++||+ |+|+++.++..+.+++.+...+..-.+
T Consensus 254 ~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~~~~~----------- 320 (473)
T PRK10429 254 AIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVLSCGVLLLMGLAA----------- 320 (473)
T ss_pred eeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHHhccC-----------
Confidence 3333333333 455666777766788899999999999999 999999988887776665554321001
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChH-hhhhhcceeehhhHHHHHHHHHHHHHHHHhcc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEK-EKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~ 196 (565)
..+.+.+++.-++.|++.+...+...++++|..+..+.+ -++.-|..++...+...+|..+|+.+.|++.+
T Consensus 321 --------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 321 --------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred --------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123566677778889999999999999999998865422 22234557888888889999999999998877
Q ss_pred cccc
Q 008450 197 EISR 200 (565)
Q Consensus 197 ~~gw 200 (565)
..||
T Consensus 393 ~~Gy 396 (473)
T PRK10429 393 LIGY 396 (473)
T ss_pred HcCC
Confidence 6665
No 225
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.23 E-value=4.9e-06 Score=89.89 Aligned_cols=170 Identities=15% Similarity=0.073 Sum_probs=115.4
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcccc-------c-hhHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLG-------R-YKTIAIFAAVQTL 94 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-------r-r~~~~~~~~~~~~ 94 (565)
..+|+..+++-+..++|.|+.+.+|++..+.|++.+.-.+.+.+...++|+++||... + |-.-.++....++
T Consensus 266 ~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai 345 (466)
T KOG2532|consen 266 SAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAV 345 (466)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999822 1 1111223333333
Q ss_pred HHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceee
Q 008450 95 GTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 174 (565)
Q Consensus 95 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (565)
..+.+++. +. . ........+.++..+.|+..++ ...-..|+.| +. -+..++
T Consensus 346 ~l~~l~~~---~~------~---------~~~~a~~~l~~~~~~~g~~~~G----f~~~~~~~ap-q~------a~~l~g 396 (466)
T KOG2532|consen 346 FLLVLAFT---SD------E---------HRLLAVILLTIAIGLSGFNISG----FYKNHQDIAP-QH------AGFVMG 396 (466)
T ss_pred HHHeeeec---CC------C---------cchHHHHHHHHHHHHcccchhh----hHhhhhhccc-hH------HHHHHH
Confidence 33333333 11 0 0001122222222223333333 2233333333 33 688899
Q ss_pred hhhHHHHHHHHHHHHHHHHhccc---ccchhhHHHHHHHHHHHHHHHHhc
Q 008450 175 RFFFFISLGTLMAVTVLVYIQDE---ISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 175 ~~~~~~~lg~~lg~~i~g~l~~~---~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
+.+...++..+++|.+.|.+..+ ..|+.+|.+.+++.++.-+++.+.
T Consensus 397 ~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 397 IINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999999998842 369999999988877766555444
No 226
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.21 E-value=1.8e-05 Score=80.56 Aligned_cols=166 Identities=14% Similarity=0.082 Sum_probs=111.5
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhc--CCCC----chhhhh------------H-HHHHHHHHHHHHhhhHHHhhccccchh
Q 008450 23 IELCERLSTMGIAVNLVTYLVGT--MHLP----SATSAN------------I-VTDFMGTSFLLCLLGGFLADTFLGRYK 83 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~--l~~s----~~~~~~------------~-~~~~~~~~~~~~~~~G~laDr~~Grr~ 83 (565)
+-|-+++++||++-......+.. .|.. +.+.-. . ...-.+.-+-+.++.+++.||+ |||+
T Consensus 334 iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverl-GRKk 412 (528)
T KOG0253|consen 334 IWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERL-GRKK 412 (528)
T ss_pred HHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHh-cchh
Confidence 56677889999886655544432 1111 111111 0 1122455667889999999998 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCCh
Q 008450 84 TIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDE 163 (565)
Q Consensus 84 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~ 163 (565)
++..+++++.+..++.....+ ++ ....+++++|+.. ++.+.+++.|-.|++|.+.
T Consensus 413 TMal~l~~f~iflfll~~c~~-rn-------------------~~tvllf~arafi----sg~fqvaYvYtPEVyPTav- 467 (528)
T KOG0253|consen 413 TMALSLILFGIFLFLLTTCKT-RN-------------------AYTVLLFTARAFI----SGAFQVAYVYTPEVYPTAV- 467 (528)
T ss_pred HHHHHHHHHHHHHHHHHHhcC-cc-------------------hhHHHHHHHHHHH----hchheEEEEecCcccchhh-
Confidence 999999999988777655422 11 1245566777665 4555678899999999999
Q ss_pred HhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhc
Q 008450 164 KEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAG 221 (565)
Q Consensus 164 ~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~ 221 (565)
|+...|....+..+|+++.|.+. ...+ .+=..+..+.+.+++++.+...++
T Consensus 468 -----RatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 468 -----RATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred -----hhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheee
Confidence 99999999999999999999888 3333 332334445555555555554443
No 227
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.17 E-value=2.2e-05 Score=85.57 Aligned_cols=170 Identities=8% Similarity=-0.036 Sum_probs=120.4
Q ss_pred HHHHHHHHHhhhcCCCCch----hhhhHHHHHHHHHHHHHhhhH----HHhhccccchhHH--HHHHHHHHHHHHHHHHH
Q 008450 33 GIAVNLVTYLVGTMHLPSA----TSANIVTDFMGTSFLLCLLGG----FLADTFLGRYKTI--AIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~----~~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~~--~~~~~~~~~~~~~~a~~ 102 (565)
-..+.++.|..++.+.+.. ..+++.+.-.+...+..++.. ++.||..+.+... .+|+++.+++.+.++++
T Consensus 290 Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~ 369 (475)
T TIGR00924 290 QMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAAS 369 (475)
T ss_pred HhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 3344466776665554322 256666666666666666644 5666521344444 67888888887777664
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHH
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISL 182 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 182 (565)
... -++....+++.+.+..++.++|.....|...+++.+..|++. |++.++.+.....+
T Consensus 370 ~~~---------------~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 370 IWF---------------ADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQMLGMWFLAQAM 428 (475)
T ss_pred Hhh---------------cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHHHHHHHHHHHHH
Confidence 211 011123468889999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
|..+++.+.....+..+|...|...++..++..++++...|
T Consensus 429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (475)
T TIGR00924 429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVP 469 (475)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888887777678888887777666655555554443
No 228
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.16 E-value=6e-05 Score=78.50 Aligned_cols=164 Identities=15% Similarity=0.223 Sum_probs=133.3
Q ss_pred HHhHHHHHHHHHHhhh---------cCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHH
Q 008450 29 LSTMGIAVNLVTYLVG---------TMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGML 99 (565)
Q Consensus 29 ~~~~~~~~~l~~yl~~---------~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 99 (565)
+..|-....+..++++ .+|++..|...++.....+..++-...|++..|..+.+++-.+++...+++..+.
T Consensus 213 f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~li 292 (403)
T PF03209_consen 213 FFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALI 292 (403)
T ss_pred HHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 3445555555555554 4899999999999999999999999999998866589999889999888888887
Q ss_pred HHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHH
Q 008450 100 AMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFF 179 (565)
Q Consensus 100 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 179 (565)
.++.... +.+.+..+.++.|+|.|.+.....+.+.|..++++ -|.+++.....
T Consensus 293 i~a~~~~---------------------~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaa 345 (403)
T PF03209_consen 293 ILAGPLG---------------------SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAA 345 (403)
T ss_pred HHHHhcc---------------------cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHH
Confidence 7764322 47889999999999999999999999999999888 89999999999
Q ss_pred HHHHHHHHHHHHHHhcc----------cccchhhHHHHHHHHHHHHHHHH
Q 008450 180 ISLGTLMAVTVLVYIQD----------EISRSVGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 180 ~~lg~~lg~~i~g~l~~----------~~gw~~~f~i~~~~~~~~~~~~~ 219 (565)
..++..+|..++|.+.| ..+|..+|.+-++..+.++.+..
T Consensus 346 QA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 346 QAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888887654 23577788877776666655543
No 229
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.14 E-value=2.4e-05 Score=88.18 Aligned_cols=134 Identities=14% Similarity=0.141 Sum_probs=93.3
Q ss_pred CcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH--hhh----------h
Q 008450 354 PAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKR--LSV----------A 421 (565)
Q Consensus 354 ~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~--~~~----------~ 421 (565)
..+++.+...+..++..++++.+.++..|| +.+.+|.++++++.++.++..... +.. +
T Consensus 69 ~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~----------~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~ 138 (633)
T TIGR00805 69 SSGLINGSYEIGNLLLIIFVSYFGTKLHRP----------IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLS 138 (633)
T ss_pred cceeeeehhhHHHHHHHHHHHHhhcccCcc----------eEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccc
Confidence 345566667777777777777775554443 236778888888887776543110 000 0
Q ss_pred ------hhcCCC-----C-------CCc--ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHH
Q 008450 422 ------RAVGLT-----T-------ATL--PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLS 481 (565)
Q Consensus 422 ------~~~~~~-----~-------~~~--~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~ 481 (565)
+..+.+ + ... ...+..++++.++.|+|.+..++...+++.|.+|++.|+.+.|+++....
T Consensus 139 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~ 218 (633)
T TIGR00805 139 SANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAV 218 (633)
T ss_pred ccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHH
Confidence 000000 0 000 12355667899999999999999999999999999999999999999999
Q ss_pred HHHHHhhHHhhhhhhc
Q 008450 482 LGFFVSSFLVAVVKKV 497 (565)
Q Consensus 482 lg~~ig~~l~~~l~~~ 497 (565)
+|..+|+.+++.+...
T Consensus 219 iG~~lG~llgg~l~~~ 234 (633)
T TIGR00805 219 FGPAFGYLLGSFCLQI 234 (633)
T ss_pred hhhHHHHHHHHHHHhc
Confidence 9999999999987643
No 230
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.13 E-value=6.1e-05 Score=81.60 Aligned_cols=178 Identities=12% Similarity=0.080 Sum_probs=109.0
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
.+.+.....+..++..|+.+.+.|+-..|+.+|+ ..+..|.+...+++.++++.........+ ..+++.....
T Consensus 41 ~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr-----p~il~g~~~~~~~l~ll~~~~~~~~~~~~--~~~~~~~~~~ 113 (477)
T TIGR01301 41 ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR-----PFIAAGAALVAFAVILIGFAADIGHLFGD--NLDKKTKPRA 113 (477)
T ss_pred HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH-----HHHHHHHHHHHHHHHHHHhCchhhhhccc--cccccchhHH
Confidence 3455666778888899999999987655554321 22444666666776666553211000000 0000000111
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhh--HHHHHHHHHHHHHHHHHhhHHhhhhh--hcccCCCCCCccccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMK--TMSTGLFLTTLSLGFFVSSFLVAVVK--KVTGSKGGGGWLADN 510 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~r--g~~~gl~~~~~~lg~~ig~~l~~~l~--~~~~~~~~~~w~~~~ 510 (565)
.+..++.+.+..++.....++..+++.|..|++.| +.+.++.+....+|+.+|+.+.++.. ...+-.+. . .+.
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~-~--~~~ 190 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKT-E--ACG 190 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccc-c--ccc
Confidence 23344555566677888888889999999998866 57899999999999999999887641 11000000 0 011
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 511 INRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 511 ~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
....++...|++.+++.+++.++..+..+|+.
T Consensus 191 ~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 191 VSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 11124677888888888888888888877754
No 231
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.12 E-value=0.00014 Score=71.91 Aligned_cols=131 Identities=15% Similarity=0.174 Sum_probs=100.2
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCC
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKE 115 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~ 115 (565)
+.-.+.+++.+|+|..|.+.+-.+-.++..+ .++.|.+.|++ |.+.++.+|.+...+|..++..+-+
T Consensus 22 s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~----------- 88 (250)
T PF06813_consen 22 SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS----------- 88 (250)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 3445667889999999999999999999886 58899999999 9999999999999999888766522
Q ss_pred CCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 116 TATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
+.......+.+.+..++.|.|.+.+..+....-.+.||+ + ||++.++.-....+++.+=..+-.
T Consensus 89 ------~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~ 152 (250)
T PF06813_consen 89 ------GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYS 152 (250)
T ss_pred ------CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHH
Confidence 011113467777777888887776666666666688875 6 999999988888776555433333
No 232
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.11 E-value=4.4e-05 Score=83.52 Aligned_cols=134 Identities=16% Similarity=0.253 Sum_probs=94.2
Q ss_pred hhhhHHHHHHHHHhhhhhhh-ccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhh
Q 008450 360 VFFVSAILITLAVYDRLIMP-LWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLL 438 (565)
Q Consensus 360 ~~~~~~~li~~~l~~~l~~~-l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 438 (565)
........+..++.+++.|+ +++| +.+.+|.++..++...+++. ......+
T Consensus 57 ~~~~~~~~~~~~~~G~laDr~~G~r----------~~~~~g~~~~~~g~~~~~~~------------------~~~~~ll 108 (489)
T PRK10207 57 GAFAALVYGLISIGGYVGDHLLGTK----------RTIVLGAIVLAIGYFMTGMS------------------LLKPDLI 108 (489)
T ss_pred HHHHHHHHHHHhhHHHhhhhccchH----------HHHHHHHHHHHHHHHHHHHh------------------ccchhHH
Confidence 33344445555677788776 5555 44788999998888877653 1112234
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhccCCch--hhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchh
Q 008450 439 IPQFFLVGAGEAFIYTGQLDFFITKSPKG--MKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 516 (565)
Q Consensus 439 i~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~ 516 (565)
.+..++.++|.++..|...+++.|.+|++ .|+.+.+++.+..++|.++|+.+.+++... -+|
T Consensus 109 ~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~------~gw---------- 172 (489)
T PRK10207 109 FIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADK------FGY---------- 172 (489)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHh------hCh----------
Confidence 46788889999999999999999999887 457789999999999999999999988532 123
Q ss_pred hHHHHHHHHHHHHHHHHHhhh
Q 008450 517 DLFYGLLAILSIINLVIYLIC 537 (565)
Q Consensus 517 ~~~f~~~a~l~lv~~~~~~~~ 537 (565)
.+.|++.++..+++.+.++..
T Consensus 173 ~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 173 SVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHc
Confidence 456666555444444444443
No 233
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.08 E-value=7.7e-05 Score=81.90 Aligned_cols=127 Identities=15% Similarity=0.225 Sum_probs=88.2
Q ss_pred HHHHhhhhhhhc-cccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHH
Q 008450 369 TLAVYDRLIMPL-WKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGA 447 (565)
Q Consensus 369 ~~~l~~~l~~~l-~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~ 447 (565)
..++.+++.|++ .+| +.+.+|.++..++...+.+. ......+.+..++.++
T Consensus 73 ~~~~~G~LaDr~~G~r----------~~~~~g~~~~~ig~~l~~~~------------------~~~~~~l~~~~~l~gi 124 (500)
T PRK09584 73 LVAIGGWLGDKVLGTK----------RVIMLGAIVLAIGYALVAWS------------------GHDAGIVYMGMATIAV 124 (500)
T ss_pred HHHHHHHHHHhccchH----------HHHHHHHHHHHHHHHHHHHh------------------cccHHHHHHHHHHHHH
Confidence 335667776763 544 34777888888777666542 1223445567788889
Q ss_pred HHHHhhhhhHhhhhccCCchh--hHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHH
Q 008450 448 GEAFIYTGQLDFFITKSPKGM--KTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAI 525 (565)
Q Consensus 448 g~~~~~~~~~~~~~~~~P~~~--rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~ 525 (565)
|.++..+...+++.+.+|++. |+.+.+++++..++|..+|+.+.+++.+. .+| .+.|.+.++
T Consensus 125 g~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~------~g~----------~~~F~i~~i 188 (500)
T PRK09584 125 GNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK------YGW----------SVAFALSVV 188 (500)
T ss_pred hhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh------hCH----------HHHHHHHHH
Confidence 998888888899999998653 45678888999999999999999987532 123 566777776
Q ss_pred HHHHHHHHHhhhhh
Q 008450 526 LSIINLVIYLICAV 539 (565)
Q Consensus 526 l~lv~~~~~~~~~~ 539 (565)
..+++.+.++...+
T Consensus 189 ~~~i~~i~~~~~~~ 202 (500)
T PRK09584 189 GMLITVVNFAFCQR 202 (500)
T ss_pred HHHHHHHHHHHhHH
Confidence 66666655555443
No 234
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.07 E-value=2.6e-05 Score=83.28 Aligned_cols=154 Identities=18% Similarity=0.134 Sum_probs=119.3
Q ss_pred HHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHh
Q 008450 24 ELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVT 103 (565)
Q Consensus 24 ~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~ 103 (565)
.+|.-.++.-..+.+..|.+..+|.+..+..+.......+..++.++..+|.+|+ |+|+++.++.++.+++.++..+..
T Consensus 245 ~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i~~~~~~f~~ 323 (467)
T COG2211 245 NLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAVGYLLLYFTP 323 (467)
T ss_pred HHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444444444445566777777888888888888888999999999999999999 999999999999999999998873
Q ss_pred hhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHh-hhhhcceeehhhHHHHH
Q 008450 104 KLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKE-KTQMAYFFSRFFFFISL 182 (565)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~l 182 (565)
. .+..++++...+.++|.+...+...++++|..+..+-++ +|+-|-.++.+....=+
T Consensus 324 ---~-------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~ 381 (467)
T COG2211 324 ---A-------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL 381 (467)
T ss_pred ---C-------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH
Confidence 1 358889999999999999999999999999988665322 22234555555555667
Q ss_pred HHHHHHHHHHHhcccccc
Q 008450 183 GTLMAVTVLVYIQDEISR 200 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw 200 (565)
|.+++..+.|++....||
T Consensus 382 g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 382 GLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 888888777777655443
No 235
>PRK11462 putative transporter; Provisional
Probab=98.05 E-value=6.3e-05 Score=81.71 Aligned_cols=151 Identities=10% Similarity=0.047 Sum_probs=95.7
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhh
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKL 105 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~ 105 (565)
+..+...........|.+..+|. ....+++.+.+.++.+++.+++++++||+ |+|+++..+..+..+..++..+.
T Consensus 239 ~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~~~~~~~--- 313 (460)
T PRK11462 239 FNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVISLAMFFV--- 313 (460)
T ss_pred HHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHh---
Confidence 33333333334445555555554 33456677788889999999999999999 99888775555444433333332
Q ss_pred cccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhh-cceeehhhHHHHHHH
Q 008450 106 RQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQM-AYFFSRFFFFISLGT 184 (565)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~~~~~~lg~ 184 (565)
|. .+...+++..++.|++.++..+...++++|..+..+-++.++| |..++.......+|.
T Consensus 314 ~~-------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~ 374 (460)
T PRK11462 314 PM-------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGL 374 (460)
T ss_pred ch-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHH
Confidence 11 1122344555667888888777778899998875532222122 344566667788999
Q ss_pred HHHHHHHHHhcccccc
Q 008450 185 LMAVTVLVYIQDEISR 200 (565)
Q Consensus 185 ~lg~~i~g~l~~~~gw 200 (565)
.+|+.++|++.+..||
T Consensus 375 alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 375 AFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999988887665555
No 236
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.02 E-value=9.6e-05 Score=80.43 Aligned_cols=137 Identities=15% Similarity=0.181 Sum_probs=91.5
Q ss_pred hhhhhhHHHHHHHHHhhhhhhhc-cccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeeh
Q 008450 358 LTVFFVSAILITLAVYDRLIMPL-WKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVF 436 (565)
Q Consensus 358 ~~~~~~~~~li~~~l~~~l~~~l-~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 436 (565)
+.........+...+.+++.||+ ++| +.+.+|.++..++..++... ..+..
T Consensus 50 i~~~~~~~~~l~~ligG~LaDRilGrr----------r~iliG~il~~lg~lll~~~------------------~~~~~ 101 (493)
T PRK15462 50 LFSAYCSLVYVTPILGGFLADKVLGNR----------MAVMLGALLMAIGHVVLGAS------------------EIHPS 101 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCcH----------HHHHHHHHHHHHHHHHHHHh------------------hcchh
Confidence 33334445455666778887776 544 34678888888887655431 11112
Q ss_pred hhHHHHHHHHHHHHHhhhhhHhhhhccCCch--hhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 437 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKG--MKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 437 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
.+.+...+..+|.++..+...+++.|.+|++ .|.++.++++...++|+.++|.+.+.+.+. .+|
T Consensus 102 ~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~------~Gw-------- 167 (493)
T PRK15462 102 FLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE------YSW-------- 167 (493)
T ss_pred HHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh------hCh--------
Confidence 2344445555666666677788999999876 799999999999999999999999987532 123
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhh
Q 008450 515 RLDLFYGLLAILSIINLVIYLICA 538 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~ 538 (565)
...|.+.++..+++++.++...
T Consensus 168 --~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 168 --AMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhh
Confidence 5567776666666666655443
No 237
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.99 E-value=4.7e-05 Score=80.39 Aligned_cols=155 Identities=15% Similarity=0.140 Sum_probs=124.0
Q ss_pred HHHHhhhcC---CCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 008450 38 LVTYLVGTM---HLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 38 l~~yl~~~l---~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 114 (565)
.+.|.+.-+ +.+....|.+.+.-.+.-++.-.+..++.+|+ |.|+.++++..++.+=-++++++++
T Consensus 243 f~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i~~iRi~~~~~~~~---------- 311 (412)
T PF01306_consen 243 FPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVIMAIRIIGSGFATN---------- 311 (412)
T ss_dssp HHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT--S----------
T ss_pred HHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHHHHHHHHHHhhhcc----------
Confidence 455555432 23345577788888888888899999999999 9999999999999998888888843
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeeh-hhHHHHHHHHHHHHHHHH
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR-FFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~lg~~lg~~i~g~ 193 (565)
++.+.+.+.+.|+-.+....+..-|+++.+|++- ..+...+ ++....+|.++.+.+.|+
T Consensus 312 --------------~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v~~~~~~~~~~~i~s~~~G~ 371 (412)
T PF01306_consen 312 --------------PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLVGFQFAKQIGIIILSPLAGY 371 (412)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHHHHTTTHHHHHHHHHHHHHH
T ss_pred --------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHHHHHHHHHHHHHHHhhhHHh
Confidence 7889999999999999999999999999999887 6777777 456778999999999999
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHhccc
Q 008450 194 IQDEISRSVGYGICSVAMFMAIIIFLAGTK 223 (565)
Q Consensus 194 l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 223 (565)
+.|+.|++..|++.+.+.+...++..+..+
T Consensus 372 lyd~~G~~~tylimg~iv~~~~li~~f~l~ 401 (412)
T PF01306_consen 372 LYDRIGFQHTYLIMGLIVLPFTLISAFTLK 401 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred hHhhcCcHHHHHHHHHHHHHHHHHheeeec
Confidence 999999999998887776666555555443
No 238
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.97 E-value=2e-05 Score=85.75 Aligned_cols=144 Identities=8% Similarity=-0.156 Sum_probs=113.5
Q ss_pred hcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccC
Q 008450 44 GTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQ 123 (565)
Q Consensus 44 ~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 123 (565)
+.+|+++.+.|.+.....++..++....+++.+|+ +.|+++.++.++.+++.+...+..+.-+ ..
T Consensus 281 ~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~--------------~~ 345 (468)
T TIGR00788 281 QCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWN--------------LA 345 (468)
T ss_pred ccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccc--------------cc
Confidence 35899999999999999999999999999999998 9999999999988887766532210000 00
Q ss_pred CcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccccc----
Q 008450 124 ASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS---- 199 (565)
Q Consensus 124 ~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~g---- 199 (565)
....+...+...-++.+++.+........++.+..|++. ++..++++....++|..+++.+++++.+..|
T Consensus 346 ~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~ 419 (468)
T TIGR00788 346 FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIGITCD 419 (468)
T ss_pred cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 000112345556677888888888889999999999999 9999999999999999999999999998877
Q ss_pred -chhhHHHHH
Q 008450 200 -RSVGYGICS 208 (565)
Q Consensus 200 -w~~~f~i~~ 208 (565)
++..+....
T Consensus 420 ~~~~~~~~i~ 429 (468)
T TIGR00788 420 NSNNLWLLIL 429 (468)
T ss_pred cccchHHHHH
Confidence 665555433
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.97 E-value=1.4e-05 Score=84.99 Aligned_cols=151 Identities=7% Similarity=0.016 Sum_probs=128.9
Q ss_pred hhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCccccc
Q 008450 43 VGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCE 122 (565)
Q Consensus 43 ~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 122 (565)
.++++-.+.-.|........+-.+.-++.++|..++ |+-+++.+++....+=.+..++.
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~~~S~L-------------------- 456 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFLYYSYL-------------------- 456 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHHHHHHh--------------------
Confidence 356776666667666667777888889999999999 99999999999998888888777
Q ss_pred CCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHH-HHHHHHHHHHHHHhcccccch
Q 008450 123 QASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFI-SLGTLMAVTVLVYIQDEISRS 201 (565)
Q Consensus 123 ~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~lg~~lg~~i~g~l~~~~gw~ 201 (565)
+++|+.+..-+++|+..+..+.++.+|+++..|++- +.++.++.+..- .+|--+|.+|||.+.+.+|-|
T Consensus 457 ----~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ 526 (618)
T KOG3762|consen 457 ----QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFHGLGKGLGSLIGGFVVERFGAR 526 (618)
T ss_pred ----cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhcccCcchhhhhhhhhheeehhH
Confidence 348999999999999999999999999999999999 888988877664 689999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhcccc
Q 008450 202 VGYGICSVAMFMAIIIFLAGTKR 224 (565)
Q Consensus 202 ~~f~i~~~~~~~~~~~~~~~~~~ 224 (565)
..|.+.++.+++.++.+....+.
T Consensus 527 ttf~~~giAcl~~l~~~~~iq~~ 549 (618)
T KOG3762|consen 527 TTFRIFGIACLVTLALFISIQLL 549 (618)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999998888777666655443
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.93 E-value=0.00011 Score=76.02 Aligned_cols=147 Identities=18% Similarity=0.199 Sum_probs=114.0
Q ss_pred HHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCC
Q 008450 33 GIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRP 112 (565)
Q Consensus 33 ~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 112 (565)
.+-++++.|+.+..|++..|.+..++.+..+.++++.++-++-.|+ ...|.+.+...+-.+-++..+++++
T Consensus 254 a~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~ill~~~~~l~~g-------- 324 (422)
T COG0738 254 AIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAILLLLAVALIGG-------- 324 (422)
T ss_pred HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHhcC--------
Confidence 3446788998888999999999999999999999999999999998 8888888777666666666666522
Q ss_pred CCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHH
Q 008450 113 CKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
..-+.+.++.|+..+..+|++.++..+..|++. +..+..-.+..+|+++-|.+-|
T Consensus 325 -----------------~v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~~l~maivGGAiiP~l~G 379 (422)
T COG0738 325 -----------------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSGLLVMAIVGGAIIPPLQG 379 (422)
T ss_pred -----------------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccceeeeeheecchHHHHHHH
Confidence 224455677899999999999999999999443 2333444455678888899999
Q ss_pred HhcccccchhhHHHHHHHHHH
Q 008450 193 YIQDEISRSVGYGICSVAMFM 213 (565)
Q Consensus 193 ~l~~~~gw~~~f~i~~~~~~~ 213 (565)
++.|..|-...+.+...+|.+
T Consensus 380 ~i~d~~g~~~~~~~~pllc~l 400 (422)
T COG0738 380 VIADMFGIQLTFLIVPLLCYL 400 (422)
T ss_pred HHHHhhhhHHHHHHHHHHHHH
Confidence 999999987777643333333
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.85 E-value=0.027 Score=60.29 Aligned_cols=61 Identities=18% Similarity=0.144 Sum_probs=48.8
Q ss_pred ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhh
Q 008450 432 PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 492 (565)
Q Consensus 432 ~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~ 492 (565)
..+...++.+.++.-+|.-..-....-++.|.+|++.||+.+|+-+..+++-..+.-.+.-
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666677788888887777888889999999999999999999988877777655543
No 242
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.79 E-value=0.00092 Score=73.97 Aligned_cols=139 Identities=16% Similarity=0.245 Sum_probs=101.1
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
..++...+.+...+..|+++++.|.++||+. +.+|.++..++.++.+- ..+
T Consensus 80 ~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~----------~i~g~~l~vvG~Iv~at-------------------A~~ 130 (599)
T PF06609_consen 80 WSWFSTAWTLASAVSFPFVGRLSDLFGRRYF----------FIIGSLLGVVGSIVCAT-------------------AQN 130 (599)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHHhcchHH----------HHHHHHHHHhHHHHhhc-------------------CCc
Confidence 4566777888888999999999999998854 78899999999988764 235
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
...++....+.|+|.+..... ...+.|.+|.+.|+.+.++.....-....+++.+...+.. ..+|
T Consensus 131 ~~~~iag~~l~GvgaG~~~~~-~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~------~~~W-------- 195 (599)
T PF06609_consen 131 MNTFIAGMVLYGVGAGVQELA-ALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA------HSGW-------- 195 (599)
T ss_pred HHHHHHHHHHHHHhhHHHHHH-HHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc------CCCc--------
Confidence 556788999999987776644 5568999999999988877776555555566666655431 1345
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 515 RLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
.+.|++..++..+++++.++++.
T Consensus 196 --Rw~~~~~~i~~~i~~vl~~~fY~ 218 (599)
T PF06609_consen 196 --RWIFYIFIIWSGIALVLIFFFYF 218 (599)
T ss_pred --chHHHHHHHHHHHHHHHHHHHhC
Confidence 45677777777777766555443
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.78 E-value=0.0001 Score=58.96 Aligned_cols=65 Identities=25% Similarity=0.158 Sum_probs=52.9
Q ss_pred HHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHH
Q 008450 26 CERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQ 92 (565)
Q Consensus 26 ~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 92 (565)
..-.+.-.+.++++.|+. +.|+|+.|+|.+.++..+...++++++|+++||+ ||++.++....++
T Consensus 11 ~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 11 FYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHHH
Confidence 333344456677888876 5899999999999999999999999999999999 8888777665543
No 244
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.74 E-value=0.00059 Score=73.05 Aligned_cols=109 Identities=15% Similarity=0.054 Sum_probs=87.6
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
+.+.......-++.....+.+.|+++.| +.+.++.+...+..++.++. .+.
T Consensus 65 G~I~s~F~ysYal~qIp~GlLaDrlG~K----------~vL~l~~l~Wsl~t~L~~fa-------------------~Sl 115 (511)
T TIGR00806 65 NEIIPVLPYSHLAVLVPVFLLTDYLRYK----------PVLVLQALSFVCVWLLLLLG-------------------TSV 115 (511)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHhCch----------HHHHHHHHHHHHHHHHHHHH-------------------HHH
Confidence 3444555556666666667777766766 33677777777777777663 256
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
..+.+.-++.|++++... +...++.+.+|++.|++++|+.+....+|.++++.+.+.+
T Consensus 116 ~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 116 WHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678889999999999999 9999999999999999999999999999999999999984
No 245
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.72 E-value=0.00012 Score=79.60 Aligned_cols=156 Identities=12% Similarity=0.071 Sum_probs=103.7
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhc----cccchhHHHHHHHHHHHHH-H
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADT----FLGRYKTIAIFAAVQTLGT-G 97 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~~~~~~~~~~~~~-~ 97 (565)
.++|.....++...+++.|+.+..|++..+++.+...+.++.+++.+++|+++|| + .+|....+.+.++.+.. +
T Consensus 281 ~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~~~~~~g~~ 359 (495)
T KOG2533|consen 281 CYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLCLYAIIGAI 359 (495)
T ss_pred HHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHHHHHHHHH
Confidence 7888888999999999999998778999999999999999999999999999999 5 77777777666655533 4
Q ss_pred HHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhh
Q 008450 98 MLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFF 177 (565)
Q Consensus 98 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 177 (565)
....... ......+.+....+.+...++......+...++.. +-...+.+.
T Consensus 360 ~l~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~~~~~~i 410 (495)
T KOG2533|consen 360 SLLAAAV------------------------LPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALTTVSAII 410 (495)
T ss_pred HHHhhcc------------------------chHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHHHHhhhh
Confidence 4433311 12222222333334444445555555555544431 444444444
Q ss_pred HHHH-HHHHHHHHHHHHhcccccchhhHHHHH
Q 008450 178 FFIS-LGTLMAVTVLVYIQDEISRSVGYGICS 208 (565)
Q Consensus 178 ~~~~-lg~~lg~~i~g~l~~~~gw~~~f~i~~ 208 (565)
...+ .|.+.+++.-+.....++|...|....
T Consensus 411 ~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 411 DGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred cchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 4444 445555555566666678888885443
No 246
>PTZ00207 hypothetical protein; Provisional
Probab=97.66 E-value=0.0012 Score=73.45 Aligned_cols=131 Identities=13% Similarity=0.099 Sum_probs=91.7
Q ss_pred HHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHH
Q 008450 369 TLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAG 448 (565)
Q Consensus 369 ~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g 448 (565)
.....+.+.|++++| +.+.+|.++..++.++.++.... ....+.+.+++..++.|+|
T Consensus 77 ~~lp~G~L~Dr~G~R----------~vllig~ll~~iG~ll~ala~~~-------------~i~~s~~~l~l~r~l~G~G 133 (591)
T PTZ00207 77 FLLPYSFIYDYLGPR----------PIFVLSMTVFCLGTLLFALTFQE-------------VIEGSVVRLSVYNGLMTLG 133 (591)
T ss_pred HHHHHHHHHHHhCcH----------HHHHHHHHHHHHHHHHHHHHhcc-------------cccCcHHHHHHHHHHHHHH
Confidence 333457777766665 34788999999998877764210 0013566677788899999
Q ss_pred HHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHH
Q 008450 449 EAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSI 528 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~l 528 (565)
.+..++.....+.+.+| +.||++.|+......+|+++.+.+...+.. .+ ....|++.+++.+
T Consensus 134 ~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-------~~----------~~~~fl~l~vl~~ 195 (591)
T PTZ00207 134 CMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-------DN----------TSAYFFFLMSFAL 195 (591)
T ss_pred HHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-------Hh----------HHHHHHHHHHHHH
Confidence 99998888888898887 569999999999999999875555444321 01 2456677777777
Q ss_pred HHHHHHhhhhhh
Q 008450 529 INLVIYLICAVW 540 (565)
Q Consensus 529 v~~~~~~~~~~~ 540 (565)
+..++.+.+.+.
T Consensus 196 vv~ll~~~~vr~ 207 (591)
T PTZ00207 196 VVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHhheeC
Confidence 766666555443
No 247
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.63 E-value=0.00016 Score=74.14 Aligned_cols=112 Identities=16% Similarity=0.117 Sum_probs=87.6
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
.+.+++...+.-.+..++++++.|+.+||- .+.+|.+...++.++.+.- .+
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRkp----------vll~c~~~va~s~ll~~~S-------------------~~ 120 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRKP----------VLLACLIGVALSYLLWALS-------------------RN 120 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCchH----------HHHHHHHHHHHHHHHHHHH-------------------HH
Confidence 455666677778889999999999998883 3677777777777776652 23
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
...++++-++.|+.-+... ..-+++.|.++++.|+.+++...+..++|..+||++++++.-
T Consensus 121 F~afv~aR~l~Gi~kgnl~-v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 121 FAAFVLARFLGGIFKGNLS-VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHHhhhhccCchH-HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 4344555677777665554 446899999999999999999999999999999999999864
No 248
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.60 E-value=0.00083 Score=70.62 Aligned_cols=155 Identities=15% Similarity=0.177 Sum_probs=110.3
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhcc---ccchhHHHH-HHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTF---LGRYKTIAI-FAAVQTLGTGM 98 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~-~~~~~~~~~~~ 98 (565)
+.+--++++-.=.+++++|++ ++|.+.+-.+.+-.+--+...+.+|+.|..+||+ +||||.++. +....+++..+
T Consensus 40 ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~L 118 (498)
T KOG0637|consen 40 IAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFL 118 (498)
T ss_pred HHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhh
Confidence 333344444555677888876 8899988888888888999999999999999986 477766555 44556667777
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCc----chhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceee
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQAS----GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFS 174 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 174 (565)
..++..+-... +.++. ......+.++.-+.=+..-......-++++|....+++ +.++.+
T Consensus 119 ig~aaDig~~l-----------gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~-----~~~Ans 182 (498)
T KOG0637|consen 119 IGYAADIGLLL-----------GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAK-----KTRANS 182 (498)
T ss_pred hhhHhhhhHHh-----------cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhh-----hhccch
Confidence 77775543211 11122 23455566666666677777778888999999877662 222999
Q ss_pred hhhHHHHHHHHHHHHHHHHh
Q 008450 175 RFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 175 ~~~~~~~lg~~lg~~i~g~l 194 (565)
++..++.+|..+|...+++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 99999999999998888754
No 249
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.35 E-value=0.0031 Score=67.79 Aligned_cols=162 Identities=15% Similarity=0.086 Sum_probs=103.4
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcce-e
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPV-S 434 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s 434 (565)
++..+...++.++..+.++.+. .|.. +-.+.+..|.+++.++-+++...+.. +. .
T Consensus 74 G~viaa~slg~~i~~liF~~Ws----~k~~-----~~k~Pli~s~ii~~~g~llY~~l~~~---------------~~~~ 129 (488)
T KOG2325|consen 74 GLVIAASSLGHAIFSLIFGIWS----NKTG-----SVKKPLIVSFLIAIIGNLLYLALAYV---------------PNGV 129 (488)
T ss_pred hHHHHHHHHHHHhcchhhcccc----cccC-----CcccCHHHHHHHHHHHHHHHHHHHhc---------------ccch
Confidence 4455557778888888887663 3322 12344899999999999988655432 23 6
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRG 514 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~ 514 (565)
-++++++.++.|+|.+.. ...=.|+++..-.+.|.++++..+....+|..+||.+...+....+ ++..|.+. +.-+
T Consensus 130 ~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~--~G~~i~~~-~~~n 205 (488)
T KOG2325|consen 130 KYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGE--KGFMILPG-LIFN 205 (488)
T ss_pred HHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcC--CceEEcCc-ceEE
Confidence 677888999999986553 3445677775555556666666666555666666655544432211 12233331 2223
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 515 RLDLFYGLLAILSIINLVIYLICAVWYKPKK 545 (565)
Q Consensus 515 ~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~ 545 (565)
-+...-|+.+++.++..++.+.+.+|..++.
T Consensus 206 ~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 206 MYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred ecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 3566678899999999988888887765444
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.34 E-value=0.0031 Score=57.73 Aligned_cols=137 Identities=11% Similarity=0.118 Sum_probs=99.0
Q ss_pred HHHHHHhHHHHHHHHHHhhhcCCCC------chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHH
Q 008450 25 LCERLSTMGIAVNLVTYLVGTMHLP------SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGM 98 (565)
Q Consensus 25 ~~~~~~~~~~~~~l~~yl~~~l~~s------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 98 (565)
++..++-|....++...+.++.+-+ ....-.-.++......+.++++..+.+++ |.|+.++++.+.+.+-.+.
T Consensus 5 f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~ 83 (156)
T PF05978_consen 5 FMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIAS 83 (156)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHH
Confidence 4444555666666666665554432 22223334555666777888888999998 9999999998887754444
Q ss_pred HHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 99 LAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 99 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
... | +.+.++++-++.|+|.+..+.+...++.+..++++ +++-.+++..
T Consensus 84 ~~~----~---------------------~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~ 132 (156)
T PF05978_consen 84 FFY----P---------------------NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWA 132 (156)
T ss_pred HHh----h---------------------hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHH
Confidence 322 2 36789999999999999999999999999887776 8888888888
Q ss_pred HHHHHHHHHHHHHHH
Q 008450 179 FISLGTLMAVTVLVY 193 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~ 193 (565)
..+.+.++|.++.-.
T Consensus 133 i~~~s~i~G~~~~~~ 147 (156)
T PF05978_consen 133 IFQSSLIFGNLFLFF 147 (156)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887777655443
No 251
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.31 E-value=4.5e-06 Score=89.96 Aligned_cols=169 Identities=14% Similarity=0.086 Sum_probs=104.2
Q ss_pred HHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHH-HHhhhcccCC
Q 008450 32 MGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLA-MVTKLRQLRP 110 (565)
Q Consensus 32 ~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a-~~~~~~~~~~ 110 (565)
+....+..+++.+..+.+.. -.......+...++.+++.++.||+ |||++++++..+.+++.+.++ .....++
T Consensus 269 ~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~~~~~~~~~~~~~~--- 342 (451)
T PF00083_consen 269 INFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAICSLILGIIFFLGVS--- 342 (451)
T ss_pred cccccccccccccccccccc--ccccccccccccccccccccccccc-ccccccccccccccccccccccccccccc---
Confidence 33444455555666677666 2222334455667777788999999 999999999888888777765 1100010
Q ss_pred CCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHH
Q 008450 111 RPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTV 190 (565)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i 190 (565)
.+...+...+............+..+....+..|.+|.+. |+++.++.+....++.++++.+
T Consensus 343 ------------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~~~~~i~~~i~~~~ 404 (451)
T PF00083_consen 343 ------------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSYAVGRIGGFIIPFL 404 (451)
T ss_pred ------------cccccccccceeeeeccccccccccccccccccccccccc------cccccccccccccccccccccc
Confidence 0000111111111111112222344666688899999999 9999999999999999999888
Q ss_pred HHHhcccccchhhHHHHHHHHHHHHHHHHhcccc
Q 008450 191 LVYIQDEISRSVGYGICSVAMFMAIIIFLAGTKR 224 (565)
Q Consensus 191 ~g~l~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 224 (565)
..++.+..+-...|.+.+.++++..+..++..|+
T Consensus 405 ~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 405 FPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred cccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 8888776663445555555555555554444443
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.30 E-value=0.0021 Score=70.91 Aligned_cols=134 Identities=20% Similarity=0.256 Sum_probs=103.8
Q ss_pred chhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceee
Q 008450 356 GSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSV 435 (565)
Q Consensus 356 ~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 435 (565)
+++.+...+...+..++.+++.|+++||. .+.++.++..++.++.++. .+.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk~----------~l~~~~~~~~iG~ii~~~a-------------------~~~ 142 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRKK----------TLLLAVVLFLIGAIIIALA-------------------PSW 142 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHHh-------------------hhH
Confidence 57788888888999999999999888883 3778888888888877763 377
Q ss_pred hhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccch
Q 008450 436 FLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGR 515 (565)
Q Consensus 436 ~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~ 515 (565)
..++++-++.|+|.++.......++.|.+|++.||...++.+....+|..++ ++.+... ++.. .+|
T Consensus 143 ~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~---~~~~-~~W--------- 208 (513)
T KOG0254|consen 143 YQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGT---SKVY-AGW--------- 208 (513)
T ss_pred HHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhh---ccCC-ccH---------
Confidence 7889999999999999999999999999999999999999999999888888 3333322 1110 234
Q ss_pred hhHHHHHHHHHHHHHHHH
Q 008450 516 LDLFYGLLAILSIINLVI 533 (565)
Q Consensus 516 ~~~~f~~~a~l~lv~~~~ 533 (565)
...+++..+.+++-.+.
T Consensus 209 -r~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 209 -RIPLGLALIPAVILALG 225 (513)
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 34556666666665555
No 253
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.15 E-value=0.0032 Score=69.43 Aligned_cols=129 Identities=15% Similarity=0.158 Sum_probs=99.4
Q ss_pred hhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeeh
Q 008450 357 SLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVF 436 (565)
Q Consensus 357 ~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 436 (565)
....+..++.++...+++.+.|+++|| ..+..++++..++-...++ ..+++
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk----------~~~~~~~~~~~i~~~~~a~-------------------a~~~~ 172 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK----------PVLLVSLLLFIIFGILTAF-------------------APNYW 172 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH----------HHHHHHHHHHHHHHHHHHH-------------------hCcHH
Confidence 345556666667777777777776666 3366677776666655554 45777
Q ss_pred hhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchh
Q 008450 437 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRL 516 (565)
Q Consensus 437 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~ 516 (565)
..++.-++.|++........+.+..|..+++.|+.+..+ ....+.++.+++.+.+++.. +|
T Consensus 173 ~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W---------- 233 (521)
T KOG0255|consen 173 MFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW---------- 233 (521)
T ss_pred HHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------
Confidence 888899999999999999999999999999999999999 88888888888888887642 44
Q ss_pred hHHHHHHHHHHHHHHHH
Q 008450 517 DLFYGLLAILSIINLVI 533 (565)
Q Consensus 517 ~~~f~~~a~l~lv~~~~ 533 (565)
.+.+++.++..++.++.
T Consensus 234 r~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 234 RWLFWIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 56677777777776666
No 254
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.09 E-value=0.62 Score=50.61 Aligned_cols=142 Identities=12% Similarity=0.081 Sum_probs=88.8
Q ss_pred HHhhhcCCC-----CchhhhhHHHHHHHHHHHH-HhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc---cCC
Q 008450 40 TYLVGTMHL-----PSATSANIVTDFMGTSFLL-CLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ---LRP 110 (565)
Q Consensus 40 ~yl~~~l~~-----s~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~---~~~ 110 (565)
--+.+.+.. +..+..++.+...+.+.+. .++-+++++|+ +|++++.+....+..-.+++++.- .|. +.+
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~~~~F~~~f~lF~~vl-~p~~~~~~p 104 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTVISPFLGFFALFAFVI-YPLSDLLHP 104 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHHHHHHHHHHHHHHHHH-hcchhhcCC
Confidence 334555655 3356788888776666555 88889999999 999999988888887777766651 121 000
Q ss_pred CCCCCCCcccccCCc-----------chhHHHHHHHHHHHHHhcccccc-chhhhhhccCCCCChHhhhhhcceeehhhH
Q 008450 111 RPCKETATHTCEQAS-----------GFQMGVLYIALYLIALGTGGLKS-SVSGFGTDQFDEKDEKEKTQMAYFFSRFFF 178 (565)
Q Consensus 111 ~~~~~~~~~~~~~~~-----------~~~~~~l~i~r~l~g~g~g~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 178 (565)
. +++....+..+ .+....+++.-=+. .....+ ..-++..|.+..+| -.|.++++..
T Consensus 105 ~---~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw---~~~vvS~lFW~fandi~t~~q------akRfy~l~~~ 172 (472)
T TIGR00769 105 T---ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELW---GSVVLSLLFWGFANQITTIDE------AKRFYALFGL 172 (472)
T ss_pred c---HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHH---HHHHHHHHHHHHHHhcCCHHH------HHHHHHHHHH
Confidence 0 00000001111 11122222222222 122222 55678899998888 7889999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 008450 179 FISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 179 ~~~lg~~lg~~i~g~l~ 195 (565)
+.|+|.++|+.+..++.
T Consensus 173 ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 173 GANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999998888876
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.86 E-value=0.0065 Score=49.34 Aligned_cols=68 Identities=12% Similarity=0.056 Sum_probs=61.3
Q ss_pred HHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhh
Q 008450 36 VNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTK 104 (565)
Q Consensus 36 ~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~ 104 (565)
..+.|.++++.++|..+.+++.+.-.+++.++++...++.++. .+++.+..++++..+..+.+++.++
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~~~ 79 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALTHS 79 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455677889999999999999999999999999999999997 8899999999999999999998844
No 256
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=96.76 E-value=0.28 Score=50.93 Aligned_cols=63 Identities=14% Similarity=0.139 Sum_probs=47.9
Q ss_pred ceeehh-hHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 432 PVSVFL-LIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 432 ~~s~~~-li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
+...++ .+..+.+........+.+..++.++++|+...|++|.+.|+...+|+.-=..+...+
T Consensus 365 ~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l 428 (510)
T KOG3574|consen 365 PRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWL 428 (510)
T ss_pred eechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHh
Confidence 444333 344677777777777888899999999999999999999999998876555554444
No 257
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.71 E-value=0.0063 Score=65.82 Aligned_cols=125 Identities=14% Similarity=0.145 Sum_probs=106.1
Q ss_pred HHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhH-HHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCC
Q 008450 39 VTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGG-FLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETA 117 (565)
Q Consensus 39 ~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 117 (565)
..|+...++++..+.+.+.+.......++..+.. .+...+ |-|+++.+|++...+...+.++++
T Consensus 265 ~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~~~~~~~~~~af~~-------------- 329 (463)
T KOG2816|consen 265 LLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLLSEFLQLLLFAFAT-------------- 329 (463)
T ss_pred EEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHHHHHHHHHHHHHhc--------------
Confidence 3566667999999999999999999999999888 556555 999999999999999999999983
Q ss_pred cccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhc
Q 008450 118 THTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQ 195 (565)
Q Consensus 118 ~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~ 195 (565)
+.++++....+.++. +...|+..++++.+.++++ +|+.+++......+...++|.+-+.+.
T Consensus 330 ----------~~w~~~~~~v~~~~~-~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 330 ----------ETWMMFAAGVVVALA-GIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred ----------cchhhhHHHHHHHhh-cchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 366677777776555 5666999999999999999 999999999999999999988887653
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.54 E-value=0.0021 Score=67.75 Aligned_cols=128 Identities=13% Similarity=0.055 Sum_probs=92.4
Q ss_pred HHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhcccc
Q 008450 67 LCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGL 146 (565)
Q Consensus 67 ~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~ 146 (565)
+-.++.++.|+. |||+.-+-+.+++.+-.+..+..-+ |+. |.... .....+. +-++.-+-
T Consensus 364 Gyw~tv~~id~i-GRk~iq~~GF~~~~i~~~~~~~~y~-------------~~~-~~~Gf--~v~y~l~---~ff~NFGP 423 (538)
T KOG0252|consen 364 GYWFTVYFIDII-GRKYIQLMGFFIMTIFFFVIAGPYN-------------QLE-NTIGF--VVLYSLT---FFFGNFGP 423 (538)
T ss_pred ceeEEEEEeehh-hhHHHHHhhHHHHHHHHHHHcCCcc-------------ccc-ccCce--eehHHHH---HHHHhcCC
Confidence 555677889998 9999999999999887777766411 111 22221 1112222 22333444
Q ss_pred ccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcc-----cccchhhHHHHHHHHHHHHHHHHh
Q 008450 147 KSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQD-----EISRSVGYGICSVAMFMAIIIFLA 220 (565)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~-----~~gw~~~f~i~~~~~~~~~~~~~~ 220 (565)
..+...+-+|.||.+- |+...++.-+..-.|+++|.....++.+ ..+.+.+|++.+.++++..+.-++
T Consensus 424 n~ttfivpaE~FParv------R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l 496 (538)
T KOG0252|consen 424 NATTFIVPAEIFPARV------RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL 496 (538)
T ss_pred CceeEEeehhhchHHH------hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE
Confidence 4455667789999999 9999999999989999999999999998 889999999988887776655444
No 259
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.91 E-value=0.017 Score=61.81 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCch--hhHH
Q 008450 394 QRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKG--MKTM 471 (565)
Q Consensus 394 ~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~--~rg~ 471 (565)
+.+.+|.+++.++.++++.-. ..+...+.++++++++|.++.=|...++..|+.|++ .|-.
T Consensus 93 ~tI~lGail~~iGh~~L~~~~-----------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~ 155 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISS-----------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDG 155 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccc-----------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCC
Confidence 448999999999999987631 135667888999999999999898889999988764 2566
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCCC
Q 008450 472 STGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPKK 545 (565)
Q Consensus 472 ~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~~ 545 (565)
+.+++.+.-++|+.++|.+.+++.... +++..|...++-+.++++.++...++.+...
T Consensus 156 gFt~fY~~iNiGsl~~p~i~~~~~~~~----------------g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 156 GFTLFYMGINIGSLIAPIITGLLAINY----------------GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred CccEEEEEeehHHHHHHHHHHHHHHhh----------------CHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 777888888899999999999885321 2467788999999999999888877665443
No 260
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.79 E-value=0.084 Score=59.50 Aligned_cols=102 Identities=17% Similarity=0.204 Sum_probs=77.3
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCC---------CCC
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKG---------GGG 505 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~---------~~~ 505 (565)
+..++++.++.|+|....++...+|+-|-+-++.-..+.|+..+...+|.++|-++++...+.+-+-+ .+.
T Consensus 237 ~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPr 316 (735)
T KOG3626|consen 237 FLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPR 316 (735)
T ss_pred HHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcc
Confidence 33566799999999999999999999999999999999999999999999999999998876554321 223
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcC
Q 008450 506 WLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYK 542 (565)
Q Consensus 506 w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~ 542 (565)
|++ .+-.-|.+.+.+.++..+.++++-++..
T Consensus 317 WIG------AWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 317 WIG------AWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred hhh------HHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 321 1222356677777777777666655543
No 261
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.79 E-value=0.09 Score=55.33 Aligned_cols=124 Identities=17% Similarity=0.215 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCch---hhHH
Q 008450 395 RMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKG---MKTM 471 (565)
Q Consensus 395 ~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~---~rg~ 471 (565)
.+.+|.++..+|.+++.+..... ...+..+...+.+++++.++|.++.=|....+..|+.+++ .|.+
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~----------~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~ 72 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPP----------SLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDS 72 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSS----------SC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcc----------hhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhh
Confidence 46788999999998866542110 0011334577888999999999999999999999999876 4666
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhcCCC
Q 008450 472 STGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWYKPK 544 (565)
Q Consensus 472 ~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~~~~ 544 (565)
+...+..+.++|+.++..+.+++.+. .+ +...|++.++..+++.+.++...+.++..
T Consensus 73 ~F~~fY~~in~G~~~~~~~~~~i~~~------~~----------~~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 73 FFNWFYWGINIGSLFSPTLVPYIQQN------YG----------WFLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCHHHHC------S-----------HHHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hHHHHHHHHhhhhHhhcccchhhccc------cc----------hhhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 77778888899999999888877521 22 46778899999999988887776666554
No 262
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.75 E-value=0.083 Score=56.61 Aligned_cols=159 Identities=11% Similarity=0.010 Sum_probs=118.7
Q ss_pred cccCCCCCCCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHH
Q 008450 10 DYKGSPADPSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFA 89 (565)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 89 (565)
+|++||.++.+-...+.. ++..+.-..+..|+... |+++.+.|..=+...+....+.....++.+|+ |--|.=..++
T Consensus 254 ~Y~~q~vflas~alalLY-~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l 330 (432)
T PF06963_consen 254 TYFRQPVFLASFALALLY-FTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSL 330 (432)
T ss_pred HHHhCHHHHHHHHHHHHH-HHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHH
Confidence 355566665555444433 22334445567787755 99999999999999999999999999999999 9999999998
Q ss_pred HHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCC-cchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhh
Q 008450 90 AVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQA-SGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQ 168 (565)
Q Consensus 90 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 168 (565)
..+.....++..+-..|. .+ .......++.+..+.-+|.=++--+...++-|..|+++
T Consensus 331 ~~q~~~L~~~v~~~~~~~---------------~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------ 389 (432)
T PF06963_consen 331 WWQWVCLALCVVSFWAPG---------------SPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------ 389 (432)
T ss_pred HHHHHHHHHHHHHHhcCC---------------CCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------
Confidence 888776666555422222 11 22456777778888888888888889999999999988
Q ss_pred hcceeehhhHHHHHHHHHHHHHHH
Q 008450 169 MAYFFSRFFFFISLGTLMAVTVLV 192 (565)
Q Consensus 169 r~~~~~~~~~~~~lg~~lg~~i~g 192 (565)
||...+......++--++-.+++-
T Consensus 390 Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 390 RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999988877755544
No 263
>PRK03612 spermidine synthase; Provisional
Probab=95.75 E-value=0.23 Score=54.72 Aligned_cols=154 Identities=13% Similarity=0.046 Sum_probs=88.6
Q ss_pred HHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHH--HHHHHH-HHHHHhhhcccCCCCCC
Q 008450 38 LVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV--QTLGTG-MLAMVTKLRQLRPRPCK 114 (565)
Q Consensus 38 l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~--~~~~~~-~~a~~~~~~~~~~~~~~ 114 (565)
..-.+..-+|-+..+.+.++++|.++..+++.++|+++++- -|+ ...+-+.+ ....+. +..... +.
T Consensus 37 ~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~-~~~~e~~i~l~~~~~~~ll~~~~--~~------- 105 (521)
T PRK03612 37 LGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAG-FVAVELLLALLGGLSALILYAAF--AF------- 105 (521)
T ss_pred HHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHH-HHHHHHHHHHHHHHHHHHHHHHH--HH-------
Confidence 44444556788899999999999999999999999887553 222 22221111 111111 111110 00
Q ss_pred CCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 115 ETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 115 ~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
.......++...++.++..|+..|....+..+... ++ -++..+..|....+|+++|.++.+++
T Consensus 106 ----------~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ntlGa~~G~l~~~~v 168 (521)
T PRK03612 106 ----------QGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAADYLGALVGGLAFPFL 168 (521)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhHHhHHHHHHHHHHHHH
Confidence 00011223444556677788877777666655322 12 45667888889999999999998865
Q ss_pred cc-cccch-hhHHHHHHHHHHHHHHHH
Q 008450 195 QD-EISRS-VGYGICSVAMFMAIIIFL 219 (565)
Q Consensus 195 ~~-~~gw~-~~f~i~~~~~~~~~~~~~ 219 (565)
.- ..|-. ..+.+..+..+++++.++
T Consensus 169 Llp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 169 LLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 43 56643 344433333334433333
No 264
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.71 E-value=0.13 Score=50.88 Aligned_cols=91 Identities=20% Similarity=0.260 Sum_probs=66.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHH
Q 008450 392 NLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTM 471 (565)
Q Consensus 392 ~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~ 471 (565)
+...+.+|.++..+++........++ -...+.+.+.+...+.+.+....+++......+.+|+ .||+
T Consensus 65 p~~~l~iG~~~~~~GY~~~~l~~~~~------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~ 131 (250)
T PF06813_consen 65 PWVVLLIGAVLGFVGYGLLWLAVSGR------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGT 131 (250)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCc------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCc
Confidence 34457889999999997765543211 1124555566666777777777777777777788985 6999
Q ss_pred HHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 472 STGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 472 ~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
+.|+......+++++-+.+...+.
T Consensus 132 vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 132 VVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred eehhhhHHHHhHHHHHHHHHHHHc
Confidence 999999999999988888776653
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.59 E-value=0.073 Score=60.25 Aligned_cols=95 Identities=24% Similarity=0.419 Sum_probs=76.2
Q ss_pred CCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcc
Q 008450 428 TATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWL 507 (565)
Q Consensus 428 ~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~ 507 (565)
+..+..+.+|.++++++.++||.+...+...+..+.+|+++|+...+++.....+|..+...+...=. .
T Consensus 558 ~~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~-----------~ 626 (654)
T TIGR00926 558 VSVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAEFEN-----------F 626 (654)
T ss_pred cCCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------C
Confidence 44667899999999999999999999999999999999999999999999999999998887765411 0
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHhhhhh
Q 008450 508 ADNINRGRLDLFYGLLAILSIINLVIYLICAV 539 (565)
Q Consensus 508 ~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~ 539 (565)
.....-|..++.+.++-.+++.++.+
T Consensus 627 ------~~~~~~~~~~~~~~~~~~~~f~~~a~ 652 (654)
T TIGR00926 627 ------SVQAAEFFLFASLMLVVMAIFSILAY 652 (654)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11234567777777777777666553
No 266
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.31 E-value=0.16 Score=54.78 Aligned_cols=135 Identities=20% Similarity=0.219 Sum_probs=87.4
Q ss_pred HHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHH
Q 008450 369 TLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAG 448 (565)
Q Consensus 369 ~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g 448 (565)
.-|+++.+.|-+--. ...++..+++|.++..++...++..... ..+.....+.+++..+|
T Consensus 40 ~Kp~~g~lsD~~pi~-----G~rr~~Y~~i~~~~~~~~~~~~~~~~~~---------------~~s~~~~~~~l~la~~g 99 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIF-----GYRRKPYMIIGWLLGAVSALVLALLPAS---------------ESSAAIAVVLLFLASFG 99 (433)
T ss_pred HhhhHHhhccccccc-----CCcchHHHHHHHHHHHHHHHHHHhcccc---------------cchhhhHHHHHHHHHHH
Confidence 345555555543211 1122345777888777666666554210 23444556677788889
Q ss_pred HHHhhhhhHhhhhccC---CchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHH
Q 008450 449 EAFIYTGQLDFFITKS---PKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAI 525 (565)
Q Consensus 449 ~~~~~~~~~~~~~~~~---P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~ 525 (565)
..+.....-+...|.. |.+ +|...+....+..+|+.++..+++.+....+ ....|.+.+.
T Consensus 100 ~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------------~~~~f~i~~~ 162 (433)
T PF03092_consen 100 YAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------------PQGVFLISAA 162 (433)
T ss_pred HHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC----------------CeEEehHHHH
Confidence 9888888888888776 444 8888999999999999999999888753221 1234666677
Q ss_pred HHHHHHHHHhhhhhh
Q 008450 526 LSIINLVIYLICAVW 540 (565)
Q Consensus 526 l~lv~~~~~~~~~~~ 540 (565)
+.++..+..+....|
T Consensus 163 ~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 163 LPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHhhhh
Confidence 766666666666555
No 267
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.17 E-value=0.23 Score=45.50 Aligned_cols=61 Identities=20% Similarity=0.397 Sum_probs=54.3
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
+.+.++++-++.|++.+..+++.-.++.+...++.+++.++++......+.++|..+.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888999999999999999999999999999999999999999998888888765544
No 268
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.07 E-value=0.24 Score=52.57 Aligned_cols=153 Identities=11% Similarity=0.072 Sum_probs=93.3
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCc
Q 008450 46 MHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQAS 125 (565)
Q Consensus 46 l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (565)
-|.+...+|++.....++.++++.++|.++||...-|++.++......++. ++........
T Consensus 296 sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~-~~l~~~t~~~------------------ 356 (480)
T KOG2563|consen 296 SGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGT-LMLLTCTLFL------------------ 356 (480)
T ss_pred ccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHH-HHHHHhhccC------------------
Confidence 466667889999999999999999999999998455566665555544443 2222211111
Q ss_pred chhHHHHHHHHHHHHHhccccccchhhhhhccC-CCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhccccc---ch
Q 008450 126 GFQMGVLYIALYLIALGTGGLKSSVSGFGTDQF-DEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEIS---RS 201 (565)
Q Consensus 126 ~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~g---w~ 201 (565)
.....++.-..+.|.+..+..|.-.-+..|.. |..+ +.-.|+.....++=.++=..+-+.+.+..+ |.
T Consensus 357 -~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E-------~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~ 428 (480)
T KOG2563|consen 357 -GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAE-------GTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNT 428 (480)
T ss_pred -CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCC-------cccceeEEeehhHHHHHHHHHHHHHhhccCCCCCC
Confidence 12344666667778888888898888888765 5554 333455555554433344455666666555 33
Q ss_pred hh-HHHHHHHHHHHHHHHHhccccc
Q 008450 202 VG-YGICSVAMFMAIIIFLAGTKRY 225 (565)
Q Consensus 202 ~~-f~i~~~~~~~~~~~~~~~~~~~ 225 (565)
.. -+......++..++..+.++.+
T Consensus 429 ~~~~i~~~~~~~l~~~lva~~r~~y 453 (480)
T KOG2563|consen 429 FPANIFLTVSALLGAILVAFFRPDY 453 (480)
T ss_pred ccchhHhHHHHHHHHHHHhhhhhhH
Confidence 32 2333334444455555555544
No 269
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.02 E-value=0.0064 Score=67.25 Aligned_cols=168 Identities=15% Similarity=0.178 Sum_probs=0.0
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHH-HHHHHHhhhHHHhhcc-ccchhHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMG-TSFLLCLLGGFLADTF-LGRYKTIAIFAAVQTLGTGMLA 100 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~~~~~~~~a 100 (565)
...++.+..-|+..+++-|+...+++++++++.+.+...+ +..++.+++|++..|+ ++.|+++....+...++.++..
T Consensus 313 a~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~ 392 (539)
T PF03137_consen 313 AGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYS 392 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHH
Confidence 5566667788999999999999999999999999987755 6788999999999997 4456666665555554443311
Q ss_pred ---H-H-hhhcccCC--CCC----------------CCC--------CcccccCCcchhHHHHHHHHHHHHHhccccccc
Q 008450 101 ---M-V-TKLRQLRP--RPC----------------KET--------ATHTCEQASGFQMGVLYIALYLIALGTGGLKSS 149 (565)
Q Consensus 101 ---~-~-~~~~~~~~--~~~----------------~~~--------~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~ 149 (565)
+ . .+.| +.. .+| ..+ ..-.|+..=..++..+++..++..+..+.....
T Consensus 393 ~~~~~~C~~~~-~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p 471 (539)
T PF03137_consen 393 PLFFLGCPNPP-IAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVP 471 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHeecCCCCc-eeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccc
Confidence 1 0 0100 000 011 110 011122221124556666666665666665566
Q ss_pred hhhhhhccCCCCChHhhhhhcceeehhhHHHH-HHHHHHHHHHHHhccc
Q 008450 150 VSGFGTDQFDEKDEKEKTQMAYFFSRFFFFIS-LGTLMAVTVLVYIQDE 197 (565)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-lg~~lg~~i~g~l~~~ 197 (565)
.....-+.+|+++ |+.+.++...... +|.+=||++.|.+.|.
T Consensus 472 ~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~ 514 (539)
T PF03137_consen 472 STLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDS 514 (539)
T ss_dssp -------------------------------------------------
T ss_pred hheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhh
Confidence 6667778899999 9999999887764 7899999999998874
No 270
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=93.98 E-value=0.39 Score=47.59 Aligned_cols=142 Identities=17% Similarity=0.113 Sum_probs=94.1
Q ss_pred hhhhHHHHHHHHHHHHHhhhHHHhhccccch--hHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhH
Q 008450 52 TSANIVTDFMGTSFLLCLLGGFLADTFLGRY--KTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQM 129 (565)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (565)
--|.+.+.|++++++++-+..++..|- ..| ..+.+.+++.+....+.... +..+ |+.+.+
T Consensus 283 PhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt-~~vs----------------P~kes~ 344 (454)
T KOG4332|consen 283 PHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILT-SSVS----------------PSKESP 344 (454)
T ss_pred CchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHH-hccC----------------CCcCCc
Confidence 358999999999999999998888775 333 34444444444433333332 2111 334556
Q ss_pred HHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHH
Q 008450 130 GVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSV 209 (565)
Q Consensus 130 ~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~ 209 (565)
..-+++..+.-.+.|.++|+..-+=.++.|++. |...++++..-.|+=.-++...--.-..-.+=|..|.++.+
T Consensus 345 ~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~ 418 (454)
T KOG4332|consen 345 SESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSA 418 (454)
T ss_pred hHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHH
Confidence 666788888888999999999999999999998 99999998877765444431110000112356778888877
Q ss_pred HHHHHHHH
Q 008450 210 AMFMAIII 217 (565)
Q Consensus 210 ~~~~~~~~ 217 (565)
...++.+.
T Consensus 419 ~~~~a~i~ 426 (454)
T KOG4332|consen 419 FLFVASIL 426 (454)
T ss_pred HHHHHHHH
Confidence 76666444
No 271
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.96 E-value=0.5 Score=50.29 Aligned_cols=167 Identities=11% Similarity=0.079 Sum_probs=107.8
Q ss_pred HHhHHHHHHHHHHHHhhhcccchhhhhhhhcccccccccccCcchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCc
Q 008450 313 VARLLPIWATTIIFWTTYAQMITFSVEQATTMERSIGRFQIPAGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTN 392 (565)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~ 392 (565)
++....+.+...+.|+.-.++.+.+.++. ..+.. -.+.......+..++..|+.+...|+-..|+.+||
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~l-Gvphk------~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR---- 102 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSL-GVPHK------WSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR---- 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHc-CCCcc------cccccccccccccceeccccccccccccccccccc----
Confidence 33333344444555565555555554432 11111 12334455566777888999999888777776643
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHH-
Q 008450 393 LQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTM- 471 (565)
Q Consensus 393 ~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~- 471 (565)
.-+.++.+++.+++.++++.......-.+. + +..+...+....++.+.+.-+....+..+.-++..+..-++.+-+
T Consensus 103 -PfI~~~s~~i~~~l~Lig~aaDig~~lgd~-~-~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~ 179 (498)
T KOG0637|consen 103 -PFILAGSLLIAVSLFLIGYAADIGLLLGDN-E-RKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR 179 (498)
T ss_pred -chHHHhhHHHHHHHhhhhhHhhhhHHhcCC-c-ccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc
Confidence 336788888888888887764332211110 0 011233556667778888888888888788888888886666766
Q ss_pred HHHHHHHHHHHHHHHhhHHhhh
Q 008450 472 STGLFLTTLSLGFFVSSFLVAV 493 (565)
Q Consensus 472 ~~gl~~~~~~lg~~ig~~l~~~ 493 (565)
+.+.+.+.-.+|+.+|-.+.++
T Consensus 180 Ans~f~~f~avGnvLGY~~g~y 201 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGSY 201 (498)
T ss_pred cchhHHHHHHhcceeeeecccc
Confidence 9999999999999998887764
No 272
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.40 E-value=1.3 Score=47.74 Aligned_cols=117 Identities=18% Similarity=0.138 Sum_probs=80.5
Q ss_pred HHHHHHHHhhhHHHh---hccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcc--hhHHHHHHH
Q 008450 61 MGTSFLLCLLGGFLA---DTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASG--FQMGVLYIA 135 (565)
Q Consensus 61 ~~~~~~~~~~~G~la---Dr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~i~ 135 (565)
..+..++..+.+.+. +++ ||++++.++..+..++.++.-.. .|. +-+-++|-+.+.. .......+.
T Consensus 289 g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~--~p~------dap~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLS--FPN------DAPLRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhcc--ccc------cCCCCCCcccccccccchhHHHHH
Confidence 444555556666665 456 99999999999999888877654 233 2222333333333 345566677
Q ss_pred HHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHH
Q 008450 136 LYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVY 193 (565)
Q Consensus 136 r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~ 193 (565)
-+++|++-+......+.++++.+ +++ |..+++++..-..++..++......
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~-~~~------~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLY-PDD------RAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHh-cCc------hHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 78899999999999999999999 444 7788888777777777665444443
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=92.22 E-value=19 Score=38.79 Aligned_cols=59 Identities=12% Similarity=0.158 Sum_probs=50.5
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhh
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVA 492 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~ 492 (565)
+-++.++..++.|+..+........+..+.++++.|..+..+..++..+|-.+|+.++-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777889999888888888889999999999999999999998999888887754
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=91.65 E-value=0.81 Score=48.47 Aligned_cols=113 Identities=9% Similarity=-0.016 Sum_probs=77.1
Q ss_pred chhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHH--HHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcch
Q 008450 50 SATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAA--VQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGF 127 (565)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (565)
..+..+...+|.+|.++++--.-++ --|++.+.+++ +..+-.++.++-..+|+
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~-----rir~lwils~LQ~~nl~~~~l~s~~~fips-------------------- 334 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF-----RIRRLWILSLLQVINLVFLLLQSWYRFIPS-------------------- 334 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee-----ehhhHHHHHHHHHHHHHHHHHHHHHHHhhH--------------------
Confidence 3556677778888777775433221 23444443322 22223334444433343
Q ss_pred hHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 128 QMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 128 ~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
.+.+++..+..|+..|+.+.+....+.|..|+++ |..+++...++-++|..++..++-++
T Consensus 335 -i~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 335 -IWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred -HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 7778888889999999999999999999888777 99999998888888888887666544
No 275
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=91.05 E-value=5.9 Score=39.28 Aligned_cols=61 Identities=10% Similarity=0.117 Sum_probs=41.4
Q ss_pred hhhcceeehhhHHHHHHHHHHHHHHHHh---cc--cccchhhHHHHHHHHHHHHHHHHhccccccc
Q 008450 167 TQMAYFFSRFFFFISLGTLMAVTVLVYI---QD--EISRSVGYGICSVAMFMAIIIFLAGTKRYRY 227 (565)
Q Consensus 167 ~~r~~~~~~~~~~~~lg~~lg~~i~g~l---~~--~~gw~~~f~i~~~~~~~~~~~~~~~~~~~~~ 227 (565)
|+|+.......++.|+|+++.-+..-.. .+ ...|++++.+.+.+.++-++++....++.+.
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~ 67 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDI 67 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3478888888888899988774332211 11 2349999998888877777777776666543
No 276
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.58 E-value=29 Score=37.80 Aligned_cols=54 Identities=19% Similarity=0.146 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHH
Q 008450 437 LLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 490 (565)
Q Consensus 437 ~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l 490 (565)
.++...++..+.....+.+..++.++++.+..-|++|.+.|+.+++|+---..+
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~ 460 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTF 460 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHH
Confidence 345577888888888889999999999999999999999999999998654443
No 277
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=90.47 E-value=4.7 Score=41.73 Aligned_cols=101 Identities=11% Similarity=0.041 Sum_probs=60.7
Q ss_pred ceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccc
Q 008450 432 PVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNI 511 (565)
Q Consensus 432 ~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~ 511 (565)
...++++-.++++...-..+..+.+..-+.+....+.-|...|+++++.- ++-+.+.-.+-+..+ --++-..
T Consensus 323 t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g-----~~L~ir~ 394 (433)
T KOG3810|consen 323 TQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL---ILQSILTLIVVDDRG-----LGLDIRT 394 (433)
T ss_pred ccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH---HHHHhheEEEEcccc-----cCCCcce
Confidence 45688888999999888888877777777767777778888888876443 333333333322110 0011111
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHhhhhhh
Q 008450 512 NRGRLDLFYGLLAILSIINLVIYLICAVW 540 (565)
Q Consensus 512 ~~~~~~~~f~~~a~l~lv~~~~~~~~~~~ 540 (565)
.-.-+...|.+++++-+++....+...++
T Consensus 395 Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~~ 423 (433)
T KOG3810|consen 395 QFVVYSSYFIVLGVIFLIGFGIEYLMCRR 423 (433)
T ss_pred eEEEEeehHHHHHHHHHHHHHHHHHHhhc
Confidence 11124455788888888887665555443
No 278
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=88.44 E-value=34 Score=35.59 Aligned_cols=143 Identities=13% Similarity=0.028 Sum_probs=79.6
Q ss_pred cchhhhhhhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCccee
Q 008450 355 AGSLTVFFVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVS 434 (565)
Q Consensus 355 ~~~~~~~~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 434 (565)
...+........++.+++.+.+.|+++||.. ++..+.+-...+ +... ..+
T Consensus 71 Ia~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~---------cl~~cily~~sc-----l~k~----------------~~~ 120 (354)
T PF05631_consen 71 IAILFVAGFASSAIFGTFVGSLADRYGRKKA---------CLLFCILYSLSC-----LTKH----------------SSN 120 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHH---------HHHHHHHHHHHH-----HHHh----------------ccc
Confidence 3445566677888999999999998888721 122222222222 1111 346
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhh-----hccCCchhhHHHHHHHH-HHHHHHHHHhhHHhhhhhhcccCCCCCCccc
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFF-----ITKSPKGMKTMSTGLFL-TTLSLGFFVSSFLVAVVKKVTGSKGGGGWLA 508 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~-----~~~~P~~~rg~~~gl~~-~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~ 508 (565)
...+++.-++.|++..+.+..--+.. .+-.|++..+...+... ..+.+-.++++.+...+.+..+.
T Consensus 121 ~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~-------- 192 (354)
T PF05631_consen 121 YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGF-------- 192 (354)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCC--------
Confidence 77888899999999999887655533 23456665555555444 33444445555555444321110
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 509 DNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 509 ~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
+ ....|.....+.+++.++.....+|.
T Consensus 193 -----g-~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 193 -----G-PVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred -----C-CcchHHHHHHHHHHHHHHHHhccccc
Confidence 0 12345566666666665544444443
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=86.26 E-value=29 Score=37.79 Aligned_cols=58 Identities=9% Similarity=-0.012 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHhhh-hhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 439 IPQFFLVGAGEAFIYT-GQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 439 i~~~~l~g~g~~~~~~-~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
.+.++...+-...+.. ..|.++.|....++..+..+++....++|..+|+.+...+.+
T Consensus 132 ~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 132 ALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555554455554 889999999999999999999999999999999998887653
No 280
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=85.66 E-value=53 Score=34.89 Aligned_cols=59 Identities=17% Similarity=0.132 Sum_probs=45.0
Q ss_pred eeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHh
Q 008450 433 VSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLV 491 (565)
Q Consensus 433 ~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~ 491 (565)
.+-+|.+....+.|+..+-.......+..+.+|++.+..+..+..+....|-+.|+.++
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 34566777777888877777778888888999999888888887777777777766653
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.88 E-value=26 Score=35.87 Aligned_cols=42 Identities=12% Similarity=0.290 Sum_probs=30.9
Q ss_pred hhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 453 YTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 453 ~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
+...+--+.+..+++.|--+++...+..++|..+++.++--+
T Consensus 360 YVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 360 YVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 333344455667778899999999998899888888776443
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=83.86 E-value=17 Score=35.10 Aligned_cols=61 Identities=18% Similarity=0.244 Sum_probs=48.1
Q ss_pred ehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-hhhHHHHHHHHH-HHHHHHHHhhHHhhhhh
Q 008450 435 VFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK-GMKTMSTGLFLT-TLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 435 ~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~-~~rg~~~gl~~~-~~~lg~~ig~~l~~~l~ 495 (565)
...++...++.+++.+...+....+..+..|+ +.|+...+.... ...+|..+++.+.+.+.
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLL 156 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566668888888889999999999998 678998888888 57788888887666654
No 283
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=81.69 E-value=55 Score=34.94 Aligned_cols=62 Identities=19% Similarity=0.175 Sum_probs=50.5
Q ss_pred eeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 433 VSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 433 ~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
.+..++-+..++.|++.+. ..+.++++...+|++.--++++....+.-+|..+++.++..+.
T Consensus 92 ~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllv 153 (412)
T PF01770_consen 92 TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLV 153 (412)
T ss_pred CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666777888888887765 6677899999999998889998888888888888888877664
No 284
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=73.53 E-value=1e+02 Score=33.75 Aligned_cols=42 Identities=14% Similarity=0.015 Sum_probs=38.3
Q ss_pred hhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhh
Q 008450 455 GQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKK 496 (565)
Q Consensus 455 ~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~ 496 (565)
.-|.++.|..+.++..+.-+++....++|..+++.+...+..
T Consensus 164 LFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 164 LFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999998888765
No 285
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=73.19 E-value=36 Score=35.12 Aligned_cols=107 Identities=13% Similarity=0.020 Sum_probs=69.6
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
+.++..+.-|.=..++......++|. ... +...+.-..+.++.+.+..++ |-|.++.++....... .+
T Consensus 36 ~~fl~~f~a~~gl~nlq~~vn~~lg~--~sl----~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~Y~ly-----iA 103 (390)
T KOG3097|consen 36 IAFLLTFTAYLGLQNLQTSVNYDLGT--VSL----GALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVFPYALY-----IA 103 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCccc--chh----hhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHH-----HH
Confidence 56666667777777777776664443 222 223344445555555777776 9999998876655432 22
Q ss_pred hhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCC
Q 008450 103 TKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEK 161 (565)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~ 161 (565)
.+ ++ ..+..++.+-.+.|+|.+...++-.+++++.-+..
T Consensus 104 ~N---l~-----------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 104 AN---LE-----------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred hh---cc-----------------hhHHhhccHHHhhccccccccccCcceecHHHHHH
Confidence 11 11 13556778888999999999999999988876543
No 286
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.48 E-value=12 Score=31.58 Aligned_cols=49 Identities=22% Similarity=0.228 Sum_probs=36.0
Q ss_pred hhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHH
Q 008450 54 ANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMV 102 (565)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~ 102 (565)
+.-++.=++...+.....|||.|||.|-++.-+|.+++..++....-+.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG~lnv~ 93 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLNVL 93 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 4445555777777788889999999999998887777766665554443
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=71.82 E-value=1.6e+02 Score=32.30 Aligned_cols=134 Identities=16% Similarity=0.169 Sum_probs=74.5
Q ss_pred chhhhhHHHHHHH-HHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcc---cCCC-CCCCCCcccccCC
Q 008450 50 SATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQ---LRPR-PCKETATHTCEQA 124 (565)
Q Consensus 50 ~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~---~~~~-~~~~~~~~~~~~~ 124 (565)
+..+..+-....+ ...+...+-.+++|++ +|.+++.+....+..-..++++.- +|. +.+. .+++ +.-..+
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~---~~~~~~ 131 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIIIIPFLGFFALFAFVL-YPNRDILHPDAFADK---LLAILP 131 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHHHHH-hhchhhcCCCHHHHH---hhhhcc
Confidence 3444444443333 4556677789999999 999999988887777666666641 122 1100 0000 000001
Q ss_pred cchh----------HHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHHHHh
Q 008450 125 SGFQ----------MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVLVYI 194 (565)
Q Consensus 125 ~~~~----------~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~g~l 194 (565)
.+.. ..++++.-=+.| .-...-.--++.-|....+| -.+.++++..+.|+|.+++..+..++
T Consensus 132 ~~~~~~i~~~~~Wt~slfYv~aElwg--svvlSlLFW~fAN~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~ 203 (491)
T PF03219_consen 132 PGFKGFIAMFRNWTFSLFYVMAELWG--SVVLSLLFWGFANEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYF 203 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 111111111111 11111123456667777777 78899999999999999998888877
Q ss_pred cc
Q 008450 195 QD 196 (565)
Q Consensus 195 ~~ 196 (565)
.+
T Consensus 204 ~~ 205 (491)
T PF03219_consen 204 SS 205 (491)
T ss_pred HH
Confidence 76
No 288
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=68.11 E-value=47 Score=35.81 Aligned_cols=52 Identities=10% Similarity=0.125 Sum_probs=33.3
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHH
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 490 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l 490 (565)
..+..++..++.+++.++.......+.. ..|++ .++.......+++.+++.+
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHH
Confidence 4555666777888888888888888887 56654 3444444444555554443
No 289
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=67.59 E-value=52 Score=32.65 Aligned_cols=66 Identities=11% Similarity=0.022 Sum_probs=34.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 466 KGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 466 ~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
+-+|..+.|+.....+..+.+.+...+-. ||...+-........=++..++.+++..++.++..+.
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grf----------GlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRF----------GLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhc----------eeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 44566666666666655555555554432 2221111111123344667777778877777765554
No 290
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=66.35 E-value=1.8e+02 Score=30.80 Aligned_cols=57 Identities=16% Similarity=0.118 Sum_probs=40.9
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHH
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFL 490 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l 490 (565)
+...++++....-+|.-+.-++..-...|..|++.|....|+.|..+..-..+--.+
T Consensus 385 sv~ll~agVaaaR~GLW~fDlAVtqimQe~VpEseR~vv~gvqnsL~~~ldll~~il 441 (503)
T KOG2601|consen 385 SVYLLFAGVAAARLGLWMFDLAVTQIMQETVPESERCVVFGVQNSLNSALDLLKDIL 441 (503)
T ss_pred HHHHHHHHHHHHHhhHHhccHHHHHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhE
Confidence 344455555555566666667777788899999999999999998887665554443
No 291
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=62.22 E-value=1.1e+02 Score=32.48 Aligned_cols=114 Identities=13% Similarity=0.115 Sum_probs=56.6
Q ss_pred hhHHHHHHHHHhhhhhhhccccccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCcceeehhhHHH
Q 008450 362 FVSAILITLAVYDRLIMPLWKKWKGKPGFTNLQRMAIGLVLSIVGMAAAALVERKRLSVARAVGLTTATLPVSVFLLIPQ 441 (565)
Q Consensus 362 ~~~~~li~~~l~~~l~~~l~~r~~~~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~li~~ 441 (565)
+...-++-.|++|.+..+...| |+.+-......+|..+..++..+-. +..+++...+...+...
T Consensus 76 P~sLKllWaPiVDs~y~k~~Gr---rksWvvp~q~llG~~mllLs~~v~~-------------~~g~ng~~p~v~~lt~~ 139 (510)
T KOG3574|consen 76 PFSLKLLWAPIVDSVYSKRFGR---RKSWVVPCQYLLGLFMLLLSYLVDR-------------GLGGNGGLPNVVALTLL 139 (510)
T ss_pred HHHHHHHHHhhhHHHHHHhhcc---ccceeeehHHHHHHHHHHHhhCCCc-------------ccccCCCCcchHHHHHH
Confidence 4556677788888664332222 1122222234445544444332211 11111122333344445
Q ss_pred HHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHh
Q 008450 442 FFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLV 491 (565)
Q Consensus 442 ~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~ 491 (565)
+++.-+..+.--.+.-....+...++.-|-++.........|-++|..+.
T Consensus 140 f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 140 FLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred HHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 55555555555555555666666667677666666655566666555444
No 292
>PRK03612 spermidine synthase; Provisional
Probab=61.31 E-value=99 Score=34.21 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=34.9
Q ss_pred HHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhh
Q 008450 443 FLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVK 495 (565)
Q Consensus 443 ~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~ 495 (565)
++.++-.++..|....+..+... +.-|...|-....+.+|+.+|+.+.+.+.
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 44455556666776665554322 22456677778888999999999888765
No 293
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=59.02 E-value=35 Score=30.96 Aligned_cols=90 Identities=14% Similarity=0.239 Sum_probs=48.6
Q ss_pred HHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhh
Q 008450 73 FLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSG 152 (565)
Q Consensus 73 ~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~ 152 (565)
.++||. .|++.+.+.+-.++|...+...--+-. .+..+.|. +..+++..+..|+|.-+ ..+.
T Consensus 56 ~Vs~RM--~rRm~~~~GiP~~lG~~~f~~~y~l~~----------~~~~dvP~---~~~~~~S~~~Fg~gllG---isYG 117 (153)
T PF11947_consen 56 VVSNRM--LRRMAVFVGIPTALGVAVFVVFYYLKS----------RQIVDVPP---WAVLLVSLVFFGLGLLG---ISYG 117 (153)
T ss_pred HHHHHH--HHHHHHHhchHHHHHHHHHHHHHHHHh----------ccccccCc---hHHHHHHHHHHHHHHHh---hhhh
Confidence 468998 555555555555555444433211110 11122222 33344444444444333 2455
Q ss_pred hhhccCCCCChHhhhhhcceeehhhHHHHHHHHH
Q 008450 153 FGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLM 186 (565)
Q Consensus 153 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~l 186 (565)
.++...++++ -|+++|+-.+-.|++-+.
T Consensus 118 ilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 5666677777 799999998888887654
No 294
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=45.47 E-value=4.5e+02 Score=28.85 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=84.9
Q ss_pred HHHHhhhcCCC---CchhhhhHHHHHHH-HHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCC
Q 008450 38 LVTYLVGTMHL---PSATSANIVTDFMG-TSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPC 113 (565)
Q Consensus 38 l~~yl~~~l~~---s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~ 113 (565)
+.--+.+.+.. .+..+.++-+.+.+ .+.+..++-+++.++. -|.+++.+....+....+++++.-- | |
T Consensus 45 ~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~~~F~~fF~LFa~Vi~-P------~ 116 (509)
T COG3202 45 LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIILGFFLGFFALFAFVIY-P------Y 116 (509)
T ss_pred HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHHHHHh-c------c
Confidence 33334444433 34556666677766 6788888999999998 9999999988888888888888621 2 2
Q ss_pred CCCCccc-------ccCCc-c----------hhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeeh
Q 008450 114 KETATHT-------CEQAS-G----------FQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSR 175 (565)
Q Consensus 114 ~~~~~~~-------~~~~~-~----------~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 175 (565)
.+--|.. .++-+ + +....+++.-=+-| .=...-.-..+.-|....+| -.|.+++
T Consensus 117 ~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWg--slV~S~lFw~faNeitt~~e------akRFy~l 188 (509)
T COG3202 117 KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWG--SLVLSLLFWQFANEITTIEE------AKRFYPL 188 (509)
T ss_pred ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhHHH------hhhhHHH
Confidence 2211111 11111 1 12222222211111 00000012234445554555 7889999
Q ss_pred hhHHHHHHHHHHHHHHHHhcc
Q 008450 176 FFFFISLGTLMAVTVLVYIQD 196 (565)
Q Consensus 176 ~~~~~~lg~~lg~~i~g~l~~ 196 (565)
++...|++..++..+..++..
T Consensus 189 f~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 189 FGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999999888888887765
No 295
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=45.17 E-value=78 Score=23.07 Aligned_cols=38 Identities=13% Similarity=0.266 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHH
Q 008450 58 TDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLG 95 (565)
Q Consensus 58 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 95 (565)
+....+..+.....|+..|+.++.++...+..++..+.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 44556667777888999999878877666555544443
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=41.35 E-value=92 Score=34.90 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=82.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhh-h----hcC-CCCCCcceeehhhHHHHHHHHHHHHHhhhhhHhhhhccCCc-
Q 008450 394 QRMAIGLVLSIVGMAAAALVERKRLSVA-R----AVG-LTTATLPVSVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPK- 466 (565)
Q Consensus 394 ~~l~~G~~l~~~~~~~~~~~~~~~~~~~-~----~~~-~~~~~~~~s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~- 466 (565)
+.+.++.++..+++..+........-.. . ..+ ..+.++......+...+.+.++|.+..-|...++-.|.+++
T Consensus 105 ~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~ 184 (571)
T KOG1237|consen 105 FTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDEL 184 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCcc
Confidence 3477788888888766655432221100 0 000 00111222234455677777788888889999999999982
Q ss_pred ---hh--hHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCccccccccchhhHHHHHHHHHHHHHHHHHhhhhhhc
Q 008450 467 ---GM--KTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINRGRLDLFYGLLAILSIINLVIYLICAVWY 541 (565)
Q Consensus 467 ---~~--rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~~~~~~~f~~~a~l~lv~~~~~~~~~~~~ 541 (565)
+. +......+.+..++|..++..+.-++-+ +.+| ..-|.+.+++.+++.++++.-.+-+
T Consensus 185 ~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~------~~~w----------~lgf~i~~~~~~lai~iF~~g~~~y 248 (571)
T KOG1237|consen 185 DPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD------NVGW----------KLGFGIPTVLNALAILIFLPGFPFY 248 (571)
T ss_pred CcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh------cccc----------eeeccHHHHHHHHHHHHHHcCceeE
Confidence 22 2356677777777888777766655421 2345 3457888888888888887766655
Q ss_pred CCCC
Q 008450 542 KPKK 545 (565)
Q Consensus 542 ~~~~ 545 (565)
+.++
T Consensus 249 ~~~~ 252 (571)
T KOG1237|consen 249 RYKK 252 (571)
T ss_pred EeeC
Confidence 5443
No 297
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=37.19 E-value=62 Score=32.34 Aligned_cols=62 Identities=15% Similarity=0.144 Sum_probs=46.8
Q ss_pred hHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHH---------hhccccchhHHH
Q 008450 23 IELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFL---------ADTFLGRYKTIA 86 (565)
Q Consensus 23 ~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Grr~~~~ 86 (565)
-++.++++---...++..|++ ..|+++...+.++..-.+.-++..++.|-. .||+ |||+...
T Consensus 25 GHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~wh 95 (412)
T KOG4830|consen 25 GHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSWH 95 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeeee
Confidence 455566555556678888887 568888888888888888889988888743 6898 9998654
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=34.38 E-value=3.5e+02 Score=29.81 Aligned_cols=36 Identities=11% Similarity=0.103 Sum_probs=23.3
Q ss_pred hhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhh
Q 008450 459 FFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVV 494 (565)
Q Consensus 459 ~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l 494 (565)
.+.....++.++-++.......+.|-+++-.+.-.+
T Consensus 142 WALT~Ls~~n~~~ASTcqtvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 142 WALTMLSPENVGYASTCQTVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred hhhhhcChhhcchHHHHHHhHhhhhHHHHHHHHHhh
Confidence 444455667788877777766677777766555444
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=31.64 E-value=6.4e+02 Score=26.63 Aligned_cols=133 Identities=8% Similarity=-0.030 Sum_probs=77.4
Q ss_pred CCCCCCchhhHHHHHHHhHHHHHHHHHHhhhcCCC--CchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHH
Q 008450 14 SPADPSKTGIELCERLSTMGIAVNLVTYLVGTMHL--PSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAV 91 (565)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~--s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 91 (565)
.|....=+.+-...+.++|-+..+...-= ++..- ...-.|..=....+..+++.+..|++--++ .|..-++++...
T Consensus 233 np~ll~WSlWwAl~scg~~QV~nY~Q~LW-~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s 310 (433)
T KOG3810|consen 233 NPRLLKWSLWWALASCGYYQVTNYTQILW-KEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGS 310 (433)
T ss_pred CchhhhhHHHHHHhhchhHHHHHHHHHHH-HhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHH
Confidence 34444434444445555555553333221 23321 122345555667888899999999998777 666555554443
Q ss_pred HHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcc
Q 008450 92 QTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAY 171 (565)
Q Consensus 92 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 171 (565)
...+.+++-.+.+ .+.+..+++-++.+.-.....+.+..-++.-.+++. -|-
T Consensus 311 ~~~agllf~m~~t----------------------~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~------~gL 362 (433)
T KOG3810|consen 311 AVQAGLLFIMAQT----------------------QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSEL------FGL 362 (433)
T ss_pred HHhhhhhhhhhcc----------------------cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhh------hee
Confidence 3333333333311 236677777777777777777888888888777776 666
Q ss_pred eeehh
Q 008450 172 FFSRF 176 (565)
Q Consensus 172 ~~~~~ 176 (565)
.+|+.
T Consensus 363 vFGiN 367 (433)
T KOG3810|consen 363 VFGIN 367 (433)
T ss_pred eeehH
Confidence 66653
No 300
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=30.76 E-value=6.9e+02 Score=26.69 Aligned_cols=86 Identities=13% Similarity=0.174 Sum_probs=43.7
Q ss_pred eehhhHHHHHHHHHHHHHhhhhhHhhhhccCCchhhHHHHHHHHHHHHHHHHHhhHHhhhhhhcccCCCCCCcccccccc
Q 008450 434 SVFLLIPQFFLVGAGEAFIYTGQLDFFITKSPKGMKTMSTGLFLTTLSLGFFVSSFLVAVVKKVTGSKGGGGWLADNINR 513 (565)
Q Consensus 434 s~~~li~~~~l~g~g~~~~~~~~~~~~~~~~P~~~rg~~~gl~~~~~~lg~~ig~~l~~~l~~~~~~~~~~~w~~~~~~~ 513 (565)
.....+...++.+.+.+......+.... ..|.+. +.-.....++++.+.+.+.-.......+. ..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~-~~P~~y----tqavm~G~a~aG~l~Sl~~i~tka~~~~~----------~~ 180 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAG-LFPSEY----TQAVMSGQALAGTLTSLLRILTKAAFSDS----------RT 180 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhh-cCCHHH----HHHHHhcchhHhHHHHHHHHHHHHhcCCC----------Cc
Confidence 3444556677777788777777777666 456542 22233333333333333322222211111 11
Q ss_pred chhhHHHHHHHHHHHHHHHHHh
Q 008450 514 GRLDLFYGLLAILSIINLVIYL 535 (565)
Q Consensus 514 ~~~~~~f~~~a~l~lv~~~~~~ 535 (565)
+ -..+|.+..++.+++.+.+.
T Consensus 181 s-A~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 181 S-ALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred e-eehhHHHHHHHHHHHHHHHH
Confidence 1 12356667777777777766
No 301
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=30.08 E-value=50 Score=33.88 Aligned_cols=57 Identities=11% Similarity=0.051 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhccccccchhhhhhccCCCCChHhhhhhcceeehhhHHHHHHHHHHHHHH
Q 008450 129 MGVLYIALYLIALGTGGLKSSVSGFGTDQFDEKDEKEKTQMAYFFSRFFFFISLGTLMAVTVL 191 (565)
Q Consensus 129 ~~~l~i~r~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~lg~~i~ 191 (565)
.+..++..+.-|+-.|..+.+..--+.+..++++ |..+++.....-++|..++..++
T Consensus 342 i~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~------rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 342 IWIVFALILFEGLLGGASYVNTFHNIHKETEPDV------REFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchH------HHHhHhhheecchhhHHHHHHHh
Confidence 6667777777898888888887777777777776 88888887777777766664443
No 302
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=28.87 E-value=98 Score=24.53 Aligned_cols=43 Identities=9% Similarity=0.317 Sum_probs=25.4
Q ss_pred eeehhhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHH
Q 008450 172 FFSRFFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIII 217 (565)
Q Consensus 172 ~~~~~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~ 217 (565)
+--+......++++++ .+.|++.+++ +..+++.++..++++++
T Consensus 9 ae~l~~~il~~~~iis-fi~Gy~~q~~--~~~~~~~~~g~~~~~lv 51 (76)
T PF06645_consen 9 AEKLMQYILIISAIIS-FIVGYITQSF--SYTFYIYGAGVVLTLLV 51 (76)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHH--HHHHHHHHHHHHHHHhh
Confidence 3345556677788887 5566666644 45666665555544444
No 303
>COG3619 Predicted membrane protein [Function unknown]
Probab=28.42 E-value=5.6e+02 Score=24.94 Aligned_cols=42 Identities=2% Similarity=0.059 Sum_probs=23.0
Q ss_pred hhHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHH
Q 008450 176 FFFFISLGTLMAVTVLVYIQDEISRSVGYGICSVAMFMAIIIF 218 (565)
Q Consensus 176 ~~~~~~lg~~lg~~i~g~l~~~~gw~~~f~i~~~~~~~~~~~~ 218 (565)
.+...-++.+.|.+.++++...+| ....|.+.+..+.....+
T Consensus 173 ~~~~~il~f~~GAi~g~ll~~~~g-~~al~~~~~~i~~~~~~~ 214 (226)
T COG3619 173 IYLSLILSFIVGAICGALLTLFFG-LKALWVVAALILAVYLLA 214 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 444556777777777777766555 234444444433333333
No 304
>PRK10263 DNA translocase FtsK; Provisional
Probab=28.09 E-value=2.8e+02 Score=34.18 Aligned_cols=24 Identities=17% Similarity=0.120 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHhcccccchhhHHH
Q 008450 183 GTLMAVTVLVYIQDEISRSVGYGI 206 (565)
Q Consensus 183 g~~lg~~i~g~l~~~~gw~~~f~i 206 (565)
|+++|..+..++...+|.....++
T Consensus 143 GGIIG~lLs~lL~~LfG~vGa~LI 166 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLHSSGGTIA 166 (1355)
T ss_pred cchHHHHHHHHHHHHHhHHHHHHH
Confidence 566666655555555554333333
No 305
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=26.23 E-value=1e+02 Score=27.55 Aligned_cols=25 Identities=16% Similarity=0.006 Sum_probs=19.0
Q ss_pred hhccCCchhhHHHHHHHHHHHHHHH
Q 008450 460 FITKSPKGMKTMSTGLFLTTLSLGF 484 (565)
Q Consensus 460 ~~~~~P~~~rg~~~gl~~~~~~lg~ 484 (565)
..+++|+..|....+.++...+...
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~~k 84 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSAVK 84 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999888886554333
No 306
>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=23.99 E-value=5.4e+02 Score=24.82 Aligned_cols=74 Identities=18% Similarity=0.169 Sum_probs=34.0
Q ss_pred CCchhhHHHHHHHhHHHHHHHHHHhhhcCCCCchhhhhHHHHHHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHHHHH
Q 008450 18 PSKTGIELCERLSTMGIAVNLVTYLVGTMHLPSATSANIVTDFMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTLGTG 97 (565)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~l~~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 97 (565)
|-+.....+-.+...++.+.+|..+.. .....+.+ .+...+.-.+.|++.-|+ ++++...-++=...+|.+
T Consensus 136 p~~aal~s~~sf~lg~liPllpy~~~~------~~~~~~~s--~~~~~~aL~~~G~~~a~~-~~~~~~~~~l~~~~iG~~ 206 (218)
T cd02432 136 PWQAALASAISFSVGALLPLLAILLAP------AAWKVPVT--IIATLLALALTGYVSARL-GGASVLRAILRNVIWGAL 206 (218)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc------chHHHHHH--HHHHHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHH
Confidence 334445555556656666655544321 11222222 233444555556666666 555554444333344444
Q ss_pred HHH
Q 008450 98 MLA 100 (565)
Q Consensus 98 ~~a 100 (565)
..+
T Consensus 207 aa~ 209 (218)
T cd02432 207 AMA 209 (218)
T ss_pred HHH
Confidence 333
No 307
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=22.71 E-value=2.8e+02 Score=23.34 Aligned_cols=35 Identities=11% Similarity=0.035 Sum_probs=20.2
Q ss_pred HHHHHHHHHhhhHHHhhccccchhHHHHHHHHHHH
Q 008450 60 FMGTSFLLCLLGGFLADTFLGRYKTIAIFAAVQTL 94 (565)
Q Consensus 60 ~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 94 (565)
..++..+...+.|+..|+.++-++.+.+.+++..+
T Consensus 51 ~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv 85 (100)
T TIGR02230 51 SVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGV 85 (100)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHH
Confidence 34455556666677777765766655544444333
No 308
>PF07099 DUF1361: Protein of unknown function (DUF1361); InterPro: IPR009793 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although some members are annotated as being putative integral membrane proteins.
Probab=21.80 E-value=4.1e+02 Score=24.49 Aligned_cols=54 Identities=20% Similarity=0.045 Sum_probs=33.3
Q ss_pred hhhHHHHHHHhHHHHHHHHHHhhhcCCCC------chhhhhHHHHHHHHHHHHHhhhHHH
Q 008450 21 TGIELCERLSTMGIAVNLVTYLVGTMHLP------SATSANIVTDFMGTSFLLCLLGGFL 74 (565)
Q Consensus 21 ~~~~~~~~~~~~~~~~~l~~yl~~~l~~s------~~~~~~~~~~~~~~~~~~~~~~G~l 74 (565)
.......-..+--..+|.+.-+++-.|++ .....|.-....+..+..+++.|..
T Consensus 25 ~~l~~~~~~~WLlF~PNApY~lTDliHL~~~~~~~~~~~~W~~~~~l~~~~~~gll~G~~ 84 (168)
T PF07099_consen 25 SLLFWLLFLLWLLFLPNAPYMLTDLIHLSFNGIYRQNPPIWFDFLLLLSFALFGLLLGFL 84 (168)
T ss_pred hHHHHHHHHHHHHHcCCchHHHHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444455556678877777777776 3344566666666666666666654
No 309
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=20.20 E-value=6.9e+02 Score=28.83 Aligned_cols=54 Identities=19% Similarity=0.231 Sum_probs=35.5
Q ss_pred hhHHHhh---ccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCCCCCCCcccccCCcchhHHHHHHHHHHHHHhcccc
Q 008450 70 LGGFLAD---TFLGRYKTIAIFAAVQTLGTGMLAMVTKLRQLRPRPCKETATHTCEQASGFQMGVLYIALYLIALGTGGL 146 (565)
Q Consensus 70 ~~G~laD---r~~Grr~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~r~l~g~g~g~~ 146 (565)
+++-++| ++-||.|-++++...++++++...+.. |. ++.+..+.++.+++.++.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~--~~---------------------p~~~~~~l~~~tf~~~ml 98 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLF--PK---------------------PWLFPFLLTLLTFGFILL 98 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHh--cc---------------------hHHHHHHHHHHHHHHHHH
Confidence 3344444 445678888889888888888777652 22 556666666666665554
Done!