Your job contains 1 sequence.
>008451
MEGVAMQDQSQQQQQQQQQLVPPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISRILE
DFDAYARTNTTPKWQDILGQYSMVNLELFNIVDEIRKVSKAFVVHPKNVNAENATILPVM
LSSKLLPEMEIDDNSKREQLLLGMQNLPIPSQIEKLKSRIDMIGAACESAEKVLADTRKA
YCFGTRQGPQILPTLDKGQALKIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDL
LPVGDGVHTFSDASGMYMKNTPPLSSNSIGNQGNLLQASGAQLIGRSAASPSAATSATSF
DNTTASPVPYANSPRSGTNMMNTPSPQQQQQQQQQQQQQQQQQRQKMMQLPHQQQLLAQQ
QFRQSQMQGLGQNQMSQLHDLQGQQKFQQLHGQHQMQFSQPMGHQQFQGRQLASGHVQHG
IGQSQLGQGNQLNRHLSQFSGAANSALFNAAQGTSNSQMIPNMSATVSSQSLLPRMQFGL
AGNNPQRSHASQMLSDQMFNMGASNPGSMMPIQQQQQQQQQQHNTQGAFGNMQPNAQNLQ
SNMVALQNAQQNHPNFAQQRQQNQQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008451
(565 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2056770 - symbol:MED8 "mediator subunit 8" spe... 900 8.9e-128 2
>TAIR|locus:2056770 [details] [associations]
symbol:MED8 "mediator subunit 8" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0016592 "mediator complex" evidence=IDA] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0050832
"defense response to fungus" evidence=IMP] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007126
"meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009888 "tissue development" evidence=RCA]
[GO:0010332 "response to gamma radiation" evidence=RCA] [GO:0010638
"positive regulation of organelle organization" evidence=RCA]
[GO:0031048 "chromatin silencing by small RNA" evidence=RCA]
[GO:0032204 "regulation of telomere maintenance" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0043247 "telomere maintenance in response to DNA
damage" evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] EMBL:AC004138 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0050832 GO:GO:0006351 GO:GO:0009909
GO:GO:0016592 EMBL:BT023435 EMBL:AK229348 IPI:IPI00525387
PIR:A84444 RefSeq:NP_178407.2 UniGene:At.43002 IntAct:Q4V3C1
PRIDE:Q4V3C1 EnsemblPlants:AT2G03070.1 GeneID:814836
KEGG:ath:AT2G03070 TAIR:At2g03070 eggNOG:NOG260298
HOGENOM:HOG000083381 InParanoid:Q4V3C1 OMA:PVMLSSK PhylomeDB:Q4V3C1
ProtClustDB:CLSN2690632 Genevestigator:Q4V3C1 Uniprot:Q4V3C1
Length = 524
Score = 900 (321.9 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 188/284 (66%), Positives = 222/284 (78%)
Query: 22 PPQPVAVERLNQAVVQQLNLEAVKTRAISLFKAISRILEDFDAYARTNTTPKWQDILGQY 81
PP PVA E+LN + ++LNLE++KTRA+SL KAI+RILEDFDAY RTNTTPKWQDILGQY
Sbjct: 9 PPPPVA-EKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQDILGQY 67
Query: 82 SMVNLELFNIVDEIRKVSKAFVVHPKNVNAENATILPVMLSSKLLPEMEIDDNSKREQLL 141
SMVNLELFNIV+E+++VS AFVV PKNVNA NA ILPVMLSSKLLPEME DDN+KREQLL
Sbjct: 68 SMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETDDNAKREQLL 127
Query: 142 LGMQNLPIPSQIEKLKSRIDMIGAACESAEKVLADTRKAYCFGTRQGPQILPTLDKGQAL 201
G+Q+LPIP QIE+LK+R+DMI AACE+AE+VLADTRKAY FGTRQGP +LPT+DKGQA
Sbjct: 128 QGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSMLPTMDKGQAA 187
Query: 202 KIQEQENLLRAAVNSGEGLRLPGDQRQMTPALPMHLVDLLPVGDGVHTFSDASGMYMKNT 261
KIQEQE +LR AVN G+G +LP DQRQ+T ALP HL D+L + D +G K
Sbjct: 188 KIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND--------AG---KIA 236
Query: 262 PPLSSNSIGNQGNLLQASGAQLIGRXXXXXXXXXXXXXFDNTTA 305
P SN+I NQG ++Q SG Q +GR FDNTT+
Sbjct: 237 LPGQSNNINNQG-MMQVSGTQFVGRSAASPSGPN----FDNTTS 275
Score = 375 (137.1 bits), Expect = 8.9e-128, Sum P(2) = 8.9e-128
Identities = 83/157 (52%), Positives = 100/157 (63%)
Query: 401 PMG-HQQFQGRQLASGHVQHXXXXXXXXXXXXXXRHLSQFSGAANSALFNAAQGTSNSQM 459
PMG HQQFQ RQL+ GH+QH RHL+QFSG ANSALF +AQG+ +SQM
Sbjct: 372 PMGAHQQFQARQLSGGHIQHSMSQGQLNPAMN--RHLNQFSGGANSALFTSAQGSPSSQM 429
Query: 460 IPNMSATVSSQSLLPRMQ-FGLAGNNPQRSHASQMLSDQMFNMGASNPGSMMPIXXXXXX 518
IPNMS+ + SQ+L+PRMQ FG++G NPQRSH+SQML DQMFN I
Sbjct: 430 IPNMSS-MQSQTLVPRMQQFGVSGTNPQRSHSSQMLGDQMFNTSGMMQTQQTQIQQSQQQ 488
Query: 519 XXXXHNTQGAFGNMQPNAQNLQSNMVALQNAQQNHPN 555
QG +GNMQ N Q+LQ N + +QNAQQ H N
Sbjct: 489 QQ--QQQQGGYGNMQTNQQSLQPNNM-MQNAQQRHQN 522
Score = 138 (53.6 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 32/64 (50%), Positives = 40/64 (62%)
Query: 263 PLSSNSIGNQGNLLQASGAQLIGRXXXXXXXXXXXXXFDNTTASPVPYANSPRSGTNMMN 322
P SN+I NQG ++Q SG Q +GR FDNTT SP+PY+NSPR+ T M+N
Sbjct: 238 PGQSNNINNQG-MMQVSGTQFVGRSAASPSGPN----FDNTT-SPLPYSNSPRA-TGMVN 290
Query: 323 TPSP 326
PSP
Sbjct: 291 VPSP 294
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.128 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 565 441 0.00089 118 3 11 23 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1
No. of states in DFA: 594 (63 KB)
Total size of DFA: 223 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.33u 0.08s 35.41t Elapsed: 00:00:21
Total cpu time: 35.33u 0.08s 35.41t Elapsed: 00:00:21
Start: Thu May 9 17:01:24 2013 End: Thu May 9 17:01:45 2013