BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008454
         (565 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/533 (67%), Positives = 440/533 (82%), Gaps = 10/533 (1%)

Query: 30  PFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHL 89
           PFR  ST++    K P ++           + NPIP+PHRT+PEP+GQDLDFVN+A+SHL
Sbjct: 91  PFRGFSTLLNGAAKTPNYMR----------SWNPIPVPHRTIPEPRGQDLDFVNVAHSHL 140

Query: 90  IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           I+SDW KL ++ST LTP+R+KH++LK++KD+VLS EFF WV+   P+  TLET+SI+LHI
Sbjct: 141 INSDWAKLNSMSTGLTPYRMKHIMLKIKKDHVLSFEFFNWVKAQNPNCQTLETYSIILHI 200

Query: 150 LTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF 209
           LTKN KFKS+ES+L+GIL S S D PSKLF++ILYSYR+CDSSP VFD LFKTYA  KK 
Sbjct: 201 LTKNHKFKSAESVLKGILGSGSIDHPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKL 260

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           RNA D FCQM+DYGFLP +ESCN ++S+ +  +R DIAL FY+EM+R RISPNVYTLNMV
Sbjct: 261 RNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMV 320

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           M AFCK G +E+A+EVFK ME+MGF P++T+YNTLI+G+CNKGLL+  MK K LMEKNG+
Sbjct: 321 MCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGV 380

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +TFNTLI GFC+ GKLHEAN+IFSEMKA +V PN +TYNTLINGY QVGNSEMG  
Sbjct: 381 RPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGR 440

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L++EMLRNGIK DILTYNALILGLC EG+TKKAAYLVK+LD+ +LVPN+ST+SALITGQC
Sbjct: 441 LHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC 500

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           VRKNSERAFQLYKSMIRSGC PN H F+ML+STFC+NEDFD A EV+ EM E+ +APDS 
Sbjct: 501 VRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSD 560

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            LSEL  GL   GK+ELA+KL ++ME++ L+P+GFDK +TIN   E+ EKE+G
Sbjct: 561 TLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTINFRAESEEKENG 613



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 4/216 (1%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL EA  I    +  + SP V  +++L   Y Q+        ++ +M   G    + + N
Sbjct: 228 KLFEA--ILYSYRICDSSPCV--FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCN 283

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           A I       +   A    +++ +  + PN  T + ++   C     E+A +++K M   
Sbjct: 284 AYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETM 343

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P    +  L++ +C     +   ++ + M +  + PD +  + L +G    GK   A
Sbjct: 344 GFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEA 403

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
            K+F +M+   ++P        IN   + G  E GG
Sbjct: 404 NKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 439


>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
 gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  728 bits (1879), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/478 (71%), Positives = 398/478 (83%)

Query: 65  PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSL 124
           PIPHRT+PEPKGQDLDFVN+ +SHLIHSDW KL  LSTH TPFRV H+LLK+QKD+VLSL
Sbjct: 1   PIPHRTIPEPKGQDLDFVNVVHSHLIHSDWDKLNKLSTHFTPFRVNHILLKIQKDHVLSL 60

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           EFF  ++T  P SLTLETHSI+LHILTK  KFKS++SILR +L S S DLP KLFD++L+
Sbjct: 61  EFFNSLKTLNPISLTLETHSIILHILTKKSKFKSAQSILRTLLASRSIDLPGKLFDTLLF 120

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           SYRMCDSSP VFD LFKTYAH  KFRNATD F +M+DYGFLP +ESCN +LSSLLD  RV
Sbjct: 121 SYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRV 180

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           DIAL FY+EMRR RISPN YT N+V+ A CK G +E+AVEV + MES+G  P+V +YNTL
Sbjct: 181 DIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTL 240

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+GHCNKGLLS+A K KNLM KNG++PNV+TFN+LI GFCK+GKLHEANR FSEMK  NV
Sbjct: 241 IAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNV 300

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +PN VTYNTLINGYGQVGNS M   +YEEM+RNG+K DILTYNALILGLCKEGKTKKAA+
Sbjct: 301 TPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAF 360

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           LVK+LDK +LVPNASTYSALI+GQC RKNS+RAFQLYKSM+RSGC PN+  F+ML S F 
Sbjct: 361 LVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFV 420

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +NEDF+ A  VL++M  + MA DS  L E+Y GL  CGK+ LAMKL  +ME R L+P+
Sbjct: 421 KNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARRLIPE 478



 Score = 45.8 bits (107), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 2/199 (1%)

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           SP V  +++L   Y  +        ++  M   G    + + NA +  L    +   A  
Sbjct: 128 SPRV--FDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALT 185

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
             +++ +  + PN+ T++ +++  C     E+A ++ + M   G  PN   +  L++  C
Sbjct: 186 FYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHC 245

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                  A ++   M +  + P+ +  + L  G    GK   A + F +M++  + P   
Sbjct: 246 NKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTV 305

Query: 545 DKLRTINCAPENGEKESGG 563
                IN   + G     G
Sbjct: 306 TYNTLINGYGQVGNSNMAG 324


>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  723 bits (1865), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/490 (69%), Positives = 405/490 (82%)

Query: 72  PEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQ 131
           P  KGQDLDFVN+A+SHLIHSDWKKLT+LSTHLTPFRVKH+LLK+QKD+VLSLEFF WVQ
Sbjct: 25  PXTKGQDLDFVNVAHSHLIHSDWKKLTSLSTHLTPFRVKHILLKIQKDHVLSLEFFNWVQ 84

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           T  PSS TLETHS++LHILTKNRKFKS+E IL+ +L     DLP KLF++ILYSYRMCDS
Sbjct: 85  TENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDS 144

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP VFD LFKT AH KKFRNATDTF QM+ YGFLP +ESCN +LSSLLD  RVDIAL FY
Sbjct: 145 SPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFY 204

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           KEMRR RISPNVYT NMVM AFCK G +E+AV+VF+ MES+G  P+ T+YNTLI G+C K
Sbjct: 205 KEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRK 264

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           GLL+ A+K KN M   G++ NV+TFN+LI GFCK+GKLHEA+++FSEMK  NV+PN +TY
Sbjct: 265 GLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITY 324

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NTLING+ Q+GNSEMG  LYEEM RNG+K DILTYNALILGLCKEGKTKKAAY+VK+LDK
Sbjct: 325 NTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDK 384

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            +LVPNAST+SALI+GQC+R NS+RAFQLYKSM+R GC PN+  F ML+S FC+NEDF+ 
Sbjct: 385 ENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEG 444

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A  VL+EM E+C  P S +LSE+Y GL  CGK+ LAMKL  +++ R ++ KGF+K + IN
Sbjct: 445 AFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKARHMMTKGFEKAKPIN 504

Query: 552 CAPENGEKES 561
              E  +K S
Sbjct: 505 AGAERDDKTS 514



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 4/215 (1%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL EA  I    +  + SP V  +++L      +         + +M   G    + + N
Sbjct: 130 KLFEA--ILYSYRMCDSSPRV--FDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCN 185

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           A +  L    +   A    K++ +  + PN  T + ++   C     E+A Q+++ M   
Sbjct: 186 AYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESV 245

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   +  L+  +C+    + A ++   M  K +  + +  + L  G    GK   A
Sbjct: 246 GISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEA 305

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            K+F +M++  + P        IN   + G  E G
Sbjct: 306 SKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMG 340


>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
 gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/533 (63%), Positives = 417/533 (78%)

Query: 26  INIFPFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIA 85
           +   PFRR ST++ ++ +    ++P    +  K NR+ IPIPHR++PEP+G DLDFVN+ 
Sbjct: 1   MRFLPFRRFSTLLGSVPRTYASISPKFDLSLGKRNRDSIPIPHRSIPEPRGPDLDFVNVV 60

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           +SHLIHSDW KL  LS  LT FRVKH+LLK QKDYVLSLEFF WV T  PSS TLETH I
Sbjct: 61  HSHLIHSDWSKLDCLSMGLTAFRVKHILLKTQKDYVLSLEFFNWVATQNPSSHTLETHCI 120

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           +LHILTK RKFKS+ESILR I++S S D PSKLF+S+LYSYR+CDSSP VFDLLFKT+AH
Sbjct: 121 ILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESLLYSYRLCDSSPHVFDLLFKTFAH 180

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            KKFRNA+DTFC+M+DYGFLP +ESCN +LSSLL+  R DIAL FY+EMRR+RI PN YT
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           LN+V+ A CKLG +++A  VF+ M +MGF P+V +YNTLI+G+CNKGLLS AMK +++ME
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           KNG+ P+V+TFNTL+ GFCK GKL EA+++F EMK  ++SP  VTYN LINGY + GN E
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           MG  L+EEM R  +K DILTYNALILGLCKEGKTKKAAYLV++LD+  LVPNAST+SALI
Sbjct: 361 MGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALI 420

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            GQCV+K SERAFQ+YKSMI+S   P    F ML+STFC+NED+D A ++L EML +  A
Sbjct: 421 YGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKA 480

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           PD   L EL +GL  CGK + AM L  ++E + LLP+GFDKL+     P+N +
Sbjct: 481 PDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPEGFDKLKAFGLLPDNKD 533



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 35/228 (15%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ L   F    K   A+  F  MK     P V + N  ++        ++  + Y EM
Sbjct: 170 VFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREM 229

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            R+ I  +  T N +I   CK G+  KA  + +++      PN ++Y+ LI G C +   
Sbjct: 230 RRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLL 289

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A +L   M ++G                                   + PD +  + L
Sbjct: 290 SSAMKLRSVMEKNG-----------------------------------VPPDVVTFNTL 314

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            +G    GK + A KLF +M+   L P        IN   + G  E G
Sbjct: 315 VNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMG 362


>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 521

 Score =  676 bits (1744), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/499 (63%), Positives = 400/499 (80%), Gaps = 6/499 (1%)

Query: 64  IPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLS 123
           +PIPHRTLP+PKGQDLDF+NI +SH IHS W+KLT  S  LTPF+++H+LLK+Q D VLS
Sbjct: 26  LPIPHRTLPQPKGQDLDFINIFHSHFIHSQWEKLTPFSKTLTPFKIQHILLKLQNDAVLS 85

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L+FF WVQTH P+S TL THS +LHILTKNR FK+++SI   I+ ++S      LF+S+L
Sbjct: 86  LKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNS-----NLFESLL 140

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           +SY +C+SSPLVFD LFKT+AH  K RNATDTF +M++YGF P +ESCN FLSS+L  +R
Sbjct: 141 HSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKR 200

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            ++ + FY++MRRNRISPNVYT+NMV+ A+CKLG + +A EV + M+ MG  P+V T+N+
Sbjct: 201 PELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNS 260

Query: 304 LISGHCNKGLLSLAMKFKNLM-EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           LISG+C+KGLL LA+K ++LM  KNG+ PNV+TFNTLI GFCK+GKLHEANR+FSEMK  
Sbjct: 261 LISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLA 320

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           NV+PNVVTYNTLING+GQ GNSEMG  L+EEM RN +K DILTYN LILGLCKEGKTKKA
Sbjct: 321 NVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKA 380

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           AY+VK+LDK +LVPNAST+SALI GQCVR NSERAF +Y+SM+RSG  PN++ F ML S 
Sbjct: 381 AYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASA 440

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           FC+NEDFD A +VL +MLE+ M PDS ILSE+YSGL  CG+ + A+ L  ++E + LLP+
Sbjct: 441 FCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAKRLLPQ 500

Query: 543 GFDKLRTINCAPENGEKES 561
           GFD+ + +    E+    S
Sbjct: 501 GFDREKIVITGSEHDTSNS 519


>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
          Length = 483

 Score =  675 bits (1742), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/533 (61%), Positives = 402/533 (75%), Gaps = 57/533 (10%)

Query: 30  PFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHL 89
           PFR  ST++    K P ++           + NPIP+PHRT+PEP+GQDLDFVN+A+SHL
Sbjct: 5   PFRGFSTLLNGAAKTPNYMR----------SWNPIPVPHRTIPEPRGQDLDFVNVAHSHL 54

Query: 90  IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           I+SDW KL ++ST LTP+R+KH++LK++KD+                             
Sbjct: 55  INSDWAKLNSMSTGLTPYRMKHIMLKIKKDH----------------------------- 85

Query: 150 LTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF 209
                             D  S DLPSKLF++ILYSYR+CDSSP VFD LFKTYA  KK 
Sbjct: 86  ------------------DRVSIDLPSKLFEAILYSYRICDSSPCVFDSLFKTYAQMKKL 127

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           RNA D FCQM+DYGFLP +ESCN ++S+ +  +R DIAL FY+EM+R RISPNVYTLNMV
Sbjct: 128 RNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALTFYREMQRYRISPNVYTLNMV 187

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           M AFCK G +E+A+EVFK ME+MGF P++T+YNTLI+G+CNKGLL+  MK K LMEKNG+
Sbjct: 188 MCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGV 247

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +TFNTLI GFC+ GKLHEAN+IFSEMKA +V PN +TYNTLINGY QVGNSEMG  
Sbjct: 248 RPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGR 307

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L++EMLRNGIK DILTYNALILGLC EG+TKKAAYLVK+LD+ +LVPN+ST+SALITGQC
Sbjct: 308 LHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQC 367

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           VRKNSERAFQLYKSMIRSGC PN H F+ML+STFC+NEDFD A EV+ EM E+ +APDS 
Sbjct: 368 VRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSD 427

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            LSEL  GL   GK+ELA+KL ++ME++ L+P+GFDK +TIN   E+ EKE+G
Sbjct: 428 TLSELCRGLWLSGKEELALKLCKEMEMKHLMPEGFDKXKTINXRAESEEKENG 480



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 4/216 (1%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL EA  I    +  + SP V  +++L   Y Q+        ++ +M   G    + + N
Sbjct: 95  KLFEA--ILYSYRICDSSPCV--FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCN 150

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           A I       +   A    +++ +  + PN  T + ++   C     E+A +++K M   
Sbjct: 151 AYISASISLQRGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETM 210

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P    +  L++ +C     +   ++ + M +  + PD +  + L +G    GK   A
Sbjct: 211 GFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEA 270

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
            K+F +M+   ++P        IN   + G  E GG
Sbjct: 271 NKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGG 306


>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 538

 Score =  665 bits (1715), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/524 (60%), Positives = 400/524 (76%), Gaps = 8/524 (1%)

Query: 32  RRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIH 91
           RRL    ++        NP +S+N    N   IPIPHR+ PEPKGQDLDFVN+A+SHLI 
Sbjct: 10  RRLCYQYSSFAGYGRSENPRLSKNPPAAN---IPIPHRSNPEPKGQDLDFVNVAHSHLIQ 66

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           SDW KL  LS HL  FRVK+VLLK+QKDY+LS EFF W +T  P+S +LETH+IVLH LT
Sbjct: 67  SDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLT 126

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           KNRKFKS+ESILR +L +   DLP+K+FD++LYSYR CDS+P VFD LFKT+AH KKFRN
Sbjct: 127 KNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRN 186

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           ATDTF QM+DYGFLP +ESCN ++SSLL   RVDIAL FY+EMRR +ISPN YTLNMVM 
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMS 246

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +C+ G +++ +E+ ++ME +GF  +  +YNTLI+GHC KGLLS A+K KN+M KNG+QP
Sbjct: 247 GYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQP 306

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+TFNTLI GFC+  KL EA+++F EMKA N+ PN VTYNTLINGY Q G+ EM    Y
Sbjct: 307 NVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFY 366

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+ NGI+ DILTYN LILGLCK+ KT+KAA  VK+LDK +LVPN+ST+SALI GQCVR
Sbjct: 367 EDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVR 426

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           +N++R F+LYKSMIRSGC PN+  F +L+S FC+NEDFD AA+VL EM+ + +  DS  +
Sbjct: 427 RNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTV 486

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
            ++ +GL+H GKD+L  +L ++ME +  L +  D     NC  E
Sbjct: 487 HQVCNGLNHQGKDQLVKELLQEMEGKKFLQEPLD-----NCEAE 525



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 36/191 (18%), Positives = 78/191 (40%)

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            +++L   +  +         + +M   G    + + NA +  L  +G+   A    +++
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  + PN  T + +++G C     ++  +L + M R G R     +  L++  C+    
Sbjct: 230 RRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLL 289

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
             A ++   M +  + P+ +  + L  G     K + A K+F +M+   L P        
Sbjct: 290 SSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTL 349

Query: 550 INCAPENGEKE 560
           IN   + G+ E
Sbjct: 350 INGYSQQGDHE 360


>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
 gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
 gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
 gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  662 bits (1709), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/481 (63%), Positives = 384/481 (79%)

Query: 65  PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSL 124
           PIPHR  PEPKGQDLDFVN+A+SHLI SDW KL  LS HL  FRVK+VLLK+QKDY+LSL
Sbjct: 40  PIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSL 99

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           EFF W +T  P S +LETH+IVLH LTKNRKFKS+ESILR +L +   DLP+K+FD++LY
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           SYR CDS+P VFD LFKT+AH KKFRNATDTF QM+DYGFLP +ESCN ++SSLL   RV
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           DIAL FY+EMRR +ISPN YTLNMVM  +C+ G +++ +E+ ++ME +GF  +  +YNTL
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+GHC KGLLS A+K KN+M K+G+QPNV+TFNTLI GFC+  KL EA+++F EMKA NV
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +PN VTYNTLINGY Q G+ EM    YE+M+ NGI+ DILTYNALI GLCK+ KT+KAA 
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            VK+LDK +LVPN+ST+SALI GQCVRKN++R F+LYKSMIRSGC PN+  F ML+S FC
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +NEDFD A++VL EM+ + +  DS  + ++ +GL H GKD+L  KL ++ME +  L + F
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519

Query: 545 D 545
           +
Sbjct: 520 N 520


>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 1 [Glycine max]
 gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 522

 Score =  641 bits (1654), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 313/534 (58%), Positives = 402/534 (75%), Gaps = 22/534 (4%)

Query: 27  NIFPFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNP--IPIPHRTLPEPKGQDLDFVNI 84
           NI P  R ST++   +K PT                P  +PIPHRT+PEP+GQDLDF+ +
Sbjct: 3   NIQP-HRFSTLIEPPNKTPT--------------SKPFFLPIPHRTIPEPRGQDLDFICV 47

Query: 85  AYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           A+ H+I+S W+KL  LST LTPFR+KH+LL +Q D+V SL+  TWV  H PSS TL+THS
Sbjct: 48  AHRHVINSHWEKLLPLSTSLTPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHS 107

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS-PLVFDLLFKTY 203
           I+LH L+K+R+FK+++  L   L S     P  LFD++L+SYR+C+SS PLVFD LFKT 
Sbjct: 108 ILLHTLSKHRQFKTTQKFLTQTLSSHP---PHTLFDALLFSYRLCNSSSPLVFDSLFKTL 164

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPN 262
           AH  KFR+AT  +  M+++GF P ++SCN FLSSLL   R DIAL FY+E+RR   +SPN
Sbjct: 165 AHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPN 224

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           VYTLNM++ A+C LG +++  ++ + M  MG  P+V ++NTLISG+CNKGL  LA+K K+
Sbjct: 225 VYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKS 284

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
           LM +NG+QPNV+TFNTLI GFCK+ KLHEANR+F+EMK  NV P+VVTYNTL+NGYGQVG
Sbjct: 285 LMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVG 344

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +SEMG  +YEEM+RNG+K DILTYNALILGLCK+GKTKKAA  V++LDK +LVPNAST+S
Sbjct: 345 DSEMGVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFS 404

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ALITGQCVR NSERAF +Y+SM+RSGC PN   F+ML+S FC+NEDFD A +VL +ML +
Sbjct: 405 ALITGQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGR 464

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPEN 556
            M+PD   +SEL  GL  CGK++LA+ L  +ME+R LLP GFDK +     PEN
Sbjct: 465 LMSPDLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPDGFDKEKIAITHPEN 518



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 159/351 (45%), Gaps = 9/351 (2%)

Query: 143 HSIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF-- 196
           H+  ++ L K   F    +S  + L  +L     D+    +  I    R C  SP V+  
Sbjct: 172 HATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREI--RRRSC-VSPNVYTL 228

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +++ + Y    + +   D   +M D G  P + S N  +S   +     +AL     M  
Sbjct: 229 NMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVE 288

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           N + PNV T N +++ FCK   +  A  VF  M+     PSV TYNTL++G+   G   +
Sbjct: 289 NGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEM 348

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            ++    M +NG++ +++T+N LI G CK GK  +A     E+   N+ PN  T++ LI 
Sbjct: 349 GVRVYEEMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALIT 408

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G     NSE    +Y  M+R+G   +  T+  LI   CK      A  +++D+    + P
Sbjct: 409 GQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSP 468

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           + ST S L  G C    ++ A  L   M      P+    E +  T  +NE
Sbjct: 469 DLSTMSELCDGLCRCGKNQLALALCSEMEVRRLLPDGFDKEKIAITHPENE 519



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 88/209 (42%), Gaps = 3/209 (1%)

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +FS     + SP  + +++L               +Y  M  +G    + + NA +  L 
Sbjct: 143 LFSYRLCNSSSP--LVFDSLFKTLAHTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLL 200

Query: 415 KEGKTKKAAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           +  +   A    +++ + S V PN  T + +I   C+    ++ F + + M+  G  PN 
Sbjct: 201 RLRRADIALAFYREIRRRSCVSPNVYTLNMIIRAYCMLGEVQKGFDMLEKMMDMGLSPNV 260

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             F  L+S +C    F  A +V   M+E  + P+ +  + L +G     K   A ++F +
Sbjct: 261 VSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNE 320

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKESG 562
           M++  + P        +N   + G+ E G
Sbjct: 321 MKVANVDPSVVTYNTLLNGYGQVGDSEMG 349


>gi|356522220|ref|XP_003529745.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g26680, mitochondrial-like, partial [Glycine
           max]
          Length = 437

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 253/470 (53%), Positives = 322/470 (68%), Gaps = 42/470 (8%)

Query: 70  TLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTW 129
           ++ EP+GQDLD + +A+ H+  S W+KL  LST LTPFR+KH+LL ++ D V SL+   W
Sbjct: 1   SVTEPRGQDLDLITVAHRHVXESHWEKLHTLSTSLTPFRLKHLLLALRNDLVSSLKLSNW 60

Query: 130 VQT--HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR 187
             T   KP                KN   K S                  LF+S L+SYR
Sbjct: 61  PNTAYSKPP---------------KNSSRKPS---------------LHTLFESSLFSYR 90

Query: 188 MC-DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           +C  SSPLVFD LF T AH  KFR+AT  +  M+++GF P +ESCN F+SSLL   R DI
Sbjct: 91  LCSSSSPLVFDALFNTLAHTNKFRHATLAYTLMKEHGFSPTVESCNAFMSSLLHLRRADI 150

Query: 247 ALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           AL FY+EMRR   +SPNVYTLNM + A+C LG +++  E+   M  M   P+V ++NTLI
Sbjct: 151 ALAFYREMRRRSCVSPNVYTLNMAIRAYCMLGEVQKGFEMSXKMMGMVLSPNVVSFNTLI 210

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG+CNKGL  LA+K K+LM +NG+QPNV+TFNTLI GFCK+ K HEANR+F+EMK  +V+
Sbjct: 211 SGYCNKGLFGLALKVKSLMGENGVQPNVVTFNTLINGFCKERKRHEANRVFNEMKVXHVA 270

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNVVTYNTL+NGYGQVG+         EM+RNG+K DILT NALILGLCK+GKTKKAA  
Sbjct: 271 PNVVTYNTLLNGYGQVGD--------REMVRNGVKADILTINALILGLCKDGKTKKAAGF 322

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           V++LDK +LV N ST+SALITG CVR NSER F +Y+SM+RSG  PN+HIF+ML+S F +
Sbjct: 323 VRELDKENLVSNXSTFSALITGLCVRNNSERPFLIYRSMVRSGYSPNEHIFQMLISAFYK 382

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           NEDFD   +VL +ML + M+PD   LSEL  GL  CGK++LA+ L   +E
Sbjct: 383 NEDFDGDVQVLRDMLGRLMSPDLSTLSELCDGLCRCGKNQLALALCSVVE 432



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 124/255 (48%), Gaps = 11/255 (4%)

Query: 289 MESMGFIPSVTTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           M+  GF P+V + N  +S   H  +  ++LA  ++ +  ++ + PNV T N  I  +C  
Sbjct: 123 MKEHGFSPTVESCNAFMSSLLHLRRADIALAF-YREMRRRSCVSPNVYTLNMAIRAYCML 181

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G++ +   +  +M    +SPNVV++NTLI+GY   G   +   +   M  NG++ +++T+
Sbjct: 182 GEVQKGFEMSXKMMGMVLSPNVVSFNTLISGYCNKGLFGLALKVKSLMGENGVQPNVVTF 241

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N LI G CKE K  +A  +  ++    + PN  TY+ L+ G     + E        M+R
Sbjct: 242 NTLINGFCKERKRHEANRVFNEMKVXHVAPNVVTYNTLLNGYGQVGDRE--------MVR 293

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           +G + +      L+   C++    +AA  + E+ ++ +  +    S L +GL      E 
Sbjct: 294 NGVKADILTINALILGLCKDGKTKKAAGFVRELDKENLVSNXSTFSALITGLCVRNNSER 353

Query: 527 AMKLFRKMEIRGLLP 541
              ++R M   G  P
Sbjct: 354 PFLIYRSMVRSGYSP 368



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 5/219 (2%)

Query: 345 KKGKLHE--ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           +K  LH    + +FS    ++ SP  + ++ L N              Y  M  +G    
Sbjct: 74  RKPSLHTLFESSLFSYRLCSSSSP--LVFDALFNTLAHTNKFRHATLAYTLMKEHGFSPT 131

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLY 461
           + + NA +  L    +   A    +++ + S V PN  T +  I   C+    ++ F++ 
Sbjct: 132 VESCNAFMSSLLHLRRADIALAFYREMRRRSCVSPNVYTLNMAIRAYCMLGEVQKGFEMS 191

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+     PN   F  L+S +C    F  A +V   M E  + P+ +  + L +G    
Sbjct: 192 XKMMGMVLSPNVVSFNTLISGYCNKGLFGLALKVKSLMGENGVQPNVVTFNTLINGFCKE 251

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            K   A ++F +M++  + P        +N   + G++E
Sbjct: 252 RKRHEANRVFNEMKVXHVAPNVVTYNTLLNGYGQVGDRE 290


>gi|414868297|tpg|DAA46854.1| TPA: hypothetical protein ZEAMMB73_384018 [Zea mays]
          Length = 504

 Score =  348 bits (893), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 188/476 (39%), Positives = 280/476 (58%), Gaps = 16/476 (3%)

Query: 64  IPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHL---TPFRVKHVLLKVQKDY 120
           +P+PH TLP   GQD  FV    SHL  S    + +LS  L   TP R  H+++ +    
Sbjct: 11  LPLPHFTLPPLTGQDHLFVAALRSHLSASPPPAVASLSRFLPGITPLRFSHLVVLLAGRV 70

Query: 121 VLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFD 180
                  T +     S       +I+LH L   R       +L  +L S S      L  
Sbjct: 71  RPPHNLLTALLP---SPPPSLPLAILLHSLPPRR----CAELLTSVLPSVSPRAFPDLLH 123

Query: 181 SILYSYRMCDSSPLV-----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
            ++ + R+   +         D+LF + A  KK   AT T+  MR +G  P +ESCN F+
Sbjct: 124 HVILTARLAAGTQRAAVVPAIDVLFSSCARDKKLSWATLTYRAMRAHGMFPTVESCNVFI 183

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S  L   R +IA+ F++EMRR R+SPNVYT+NMVM A C LG +  A ++   M   GF 
Sbjct: 184 SGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGRVVDAAQLLDEMPCWGFS 243

Query: 296 PSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            +  ++NTLI+ +C + G +   ++ K  ME+ G+ PN +T+NT++ G CK+G++H+A R
Sbjct: 244 RTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYNTIVHGLCKEGRMHQARR 303

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           I +EM+   V+PN +T+NTLI+ Y  +G++E+   ++EEM++ G+  D++TYNALILGLC
Sbjct: 304 IVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKAGLSADLVTYNALILGLC 363

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            EGKT KA+ LV++L    L PNAST+SALI GQC ++N ERA  L  +M ++G +PN +
Sbjct: 364 NEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERALDLLNAMKKAGFQPNYY 423

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            + +L+STF +N+DF+ A +VL +ML +C+APD  +L E + GL    K  LA  L
Sbjct: 424 TYSILISTFSKNKDFEGAIDVLKDMLMRCIAPDKALLHEFFEGLSKAKKLHLAADL 479



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 125/263 (47%), Gaps = 5/263 (1%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A   ++ M + G  P+V + N  ISG        +A+ F   M +  + PNV T N ++ 
Sbjct: 160 ATLTYRAMRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMR 219

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ-VGNSEMGASLYEEMLRNGIK 400
             C  G++ +A ++  EM     S    ++NTLI  Y    G  E    L E M R G+ 
Sbjct: 220 AKCALGRVVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLV 279

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN ++ GLCKEG+  +A  +V ++    + PN  T++ LI       ++E A ++
Sbjct: 280 PNEVTYNTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKM 339

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ M+++G   +   +  L+   C      +A++++ E+    + P++   S L  G   
Sbjct: 340 HEEMMKAGLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIG--Q 397

Query: 521 CGKD--ELAMKLFRKMEIRGLLP 541
           C K   E A+ L   M+  G  P
Sbjct: 398 CKKQNPERALDLLNAMKKAGFQP 420


>gi|20279450|gb|AAM18730.1|AC092548_8 hypothetical protein [Oryza sativa Japonica Group]
          Length = 729

 Score =  342 bits (878), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 191/475 (40%), Positives = 278/475 (58%), Gaps = 16/475 (3%)

Query: 68  HRTLPEPKGQDLDFVNIAYSHL------IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYV 121
           H TLP   G+DL FV    +HL        +    L+    HLTP R+ H++L       
Sbjct: 230 HFTLPPLAGEDLLFVTALRAHLSTAPPPPTTTAASLSRFLPHLTPLRLSHLILAPPPPPR 289

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
                   + +  PS       +++LH L   R    S ++L  +L S        L   
Sbjct: 290 HDDSGHLLLASLLPSPPPPLPFALLLHSLRPRR----SSALLASLLPSIPHHAFPDLLHH 345

Query: 182 ILYSYRMCDSSP-----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           +L + R+  + P        D+LF   A  KK   AT  F  MR +G LP + SCN F+S
Sbjct: 346 VLLTARLTAARPDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFIS 405

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           + L   R +IAL F++EMRR RISPN+YT NMV+ AFC LG    A EV   M   G   
Sbjct: 406 AALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGR 465

Query: 297 SVTTYNTLISGHCNKGL-LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           +  ++NTLI+ +C  G+    A++ K  ME+ G+ P+V+T++T+I G CK+G++ +AN++
Sbjct: 466 TTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQV 525

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            SEM+   V PN VTYNTLI+GY  +G++ M   ++EEM++N +++DI+TYNALILGLC 
Sbjct: 526 LSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCN 585

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EGK KK  +L+++LD+  L PNAST+SALI G C  +NSERA QL   M +SG  PN   
Sbjct: 586 EGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTT 645

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           ++M++S+FC+N+D + A +V+ +ML +C+APD  +L+E + GL    K  LA  L
Sbjct: 646 YKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENL 700



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 54/119 (45%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             +E+ R ++ PN  T + ++  +CK+   ERA+++   M+  GF P+ TTY  +IS  C
Sbjct: 595 LLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFC 654

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
               L  A+     M    I P+    N    G  K  KLH A  + S        P+V
Sbjct: 655 KNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDV 713


>gi|297610360|ref|NP_001064440.2| Os10g0363500 [Oryza sativa Japonica Group]
 gi|110288965|gb|AAP53322.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679339|dbj|BAF26354.2| Os10g0363500 [Oryza sativa Japonica Group]
          Length = 512

 Score =  340 bits (873), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 191/475 (40%), Positives = 278/475 (58%), Gaps = 16/475 (3%)

Query: 68  HRTLPEPKGQDLDFVNIAYSHL------IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYV 121
           H TLP   G+DL FV    +HL        +    L+    HLTP R+ H++L       
Sbjct: 13  HFTLPPLAGEDLLFVTALRAHLSTAPPPPTTTAASLSRFLPHLTPLRLSHLILAPPPPPR 72

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
                   + +  PS       +++LH L   R    S ++L  +L S        L   
Sbjct: 73  HDDSGHLLLASLLPSPPPPLPFALLLHSLRPRR----SSALLASLLPSIPHHAFPDLLHH 128

Query: 182 ILYSYRMCDSSP-----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           +L + R+  + P        D+LF   A  KK   AT  F  MR +G LP + SCN F+S
Sbjct: 129 VLLTARLTAARPDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFIS 188

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           + L   R +IAL F++EMRR RISPN+YT NMV+ AFC LG    A EV   M   G   
Sbjct: 189 AALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGR 248

Query: 297 SVTTYNTLISGHCNKGL-LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           +  ++NTLI+ +C  G+    A++ K  ME+ G+ P+V+T++T+I G CK+G++ +AN++
Sbjct: 249 TTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQV 308

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            SEM+   V PN VTYNTLI+GY  +G++ M   ++EEM++N +++DI+TYNALILGLC 
Sbjct: 309 LSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCN 368

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EGK KK  +L+++LD+  L PNAST+SALI G C  +NSERA QL   M +SG  PN   
Sbjct: 369 EGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTT 428

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           ++M++S+FC+N+D + A +V+ +ML +C+APD  +L+E + GL    K  LA  L
Sbjct: 429 YKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENL 483



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 129/275 (46%), Gaps = 2/275 (0%)

Query: 269 VMHAFCKLGI-IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           V+ + C  G  +  A   F+ M + G +P V + N  IS         +A+ F   M + 
Sbjct: 150 VLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRC 209

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG-NSEM 386
            I PN+ T N ++  FC  G+  +A  +  +M    V    V++NTLI  Y + G ++  
Sbjct: 210 RISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTTVSFNTLIAAYCRDGVDAGP 269

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  +M + G+  D++TY+ +I GLCKEG+  KA  ++ ++    ++PN  TY+ LI 
Sbjct: 270 ALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRVKGVMPNTVTYNTLIH 329

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G     ++  A ++++ M+++    +   +  L+   C      +   +L E+    + P
Sbjct: 330 GYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLCNEGKMKKVEHLLRELDRAKLEP 389

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++   S L  G       E A++L   M+  G  P
Sbjct: 390 NASTFSALIVGWCKMQNSERALQLLNVMKKSGFHP 424



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I + N  +  L +  ++       +E+ R ++ PN  T + ++  +CK+   ERA+++  
Sbjct: 356 IVTYNALILGLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLN 415

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M+  GF P+ TTY  +IS  C    L  A+     M    I P+    N    G  K  
Sbjct: 416 VMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 475

Query: 348 KLHEANRIFSEMKATNVSPNV 368
           KLH A  + S        P+V
Sbjct: 476 KLHLAENLRSLNNGLKFIPDV 496


>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 489

 Score =  330 bits (847), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 193/484 (39%), Positives = 279/484 (57%), Gaps = 40/484 (8%)

Query: 67  PHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHL-------------TPFRVKHVL 113
           PH TLP   G+DL FV    +HL  +     ++LS  L             +P RV H  
Sbjct: 1   PHFTLPPLAGEDLAFVTALRAHLSSAPELAPSSLSRFLPQLNHLRLSHLLLSPPRVPH-- 58

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
                           + +  PS       S++LH LT  R    S  +L  +L S S  
Sbjct: 59  --------------DLLGSLLPSPPPPLPFSLLLHALTPRR----SSELLASLLPSVSHQ 100

Query: 174 LPSKLFDSILYSYRMC------DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
              +L   ++ + R+        ++    D+LF   A   K   AT TF  MR +G LP 
Sbjct: 101 AFPELLHHLILTARLAAGIRGTGAAAPAIDVLFSACARGNKLSQATLTFRAMRAHGLLPR 160

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           +ESCN F+S+ L  +R +IA+ F++EMRR RISPN+YT NM++ AFC LG +  A  V  
Sbjct: 161 VESCNVFISAALCLKRPEIAVSFFREMRRCRISPNMYTANMLLRAFCALGRVADAAMVLD 220

Query: 288 NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            M   G   +V ++NTLI+ +C + G L  A++ K  ME  G+ P+ +T+NT+I G CK+
Sbjct: 221 EMPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRMELEGLTPSELTYNTIIHGLCKE 280

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G++ +ANR+ SEM+A  V PN VT+NTLI GY   G++   + ++EEM++ G+++DI+TY
Sbjct: 281 GRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTY 340

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           NALILGLC++GK KKA +L + LD+  L PNAST+SALI G C  +NSERA QL   M +
Sbjct: 341 NALILGLCRDGKIKKAEHLFQQLDRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKK 400

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SG  PN   +++++STFC+N+DF+ A +V+ E+LE  MAPD ++L E +  L    K  L
Sbjct: 401 SGFHPNYDTYKIVISTFCKNKDFEGAVDVMKELLEMRMAPDKVLLHEFFEALSKAKKLHL 460

Query: 527 AMKL 530
           A  L
Sbjct: 461 AEDL 464



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 2/142 (1%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I + N  +  L    ++  A   ++++ R ++ PN  T + ++   CK    ERA+++  
Sbjct: 337 IVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEPNASTFSALILGHCKTQNSERALQLLN 396

Query: 288 NMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            M+  GF P+  TY  +IS  C NK         K L+E   + P+ +  +       K 
Sbjct: 397 VMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVMKELLEMR-MAPDKVLLHEFFEALSKA 455

Query: 347 GKLHEANRIFSEMKATNVSPNV 368
            KLH A  + S  K+    P++
Sbjct: 456 KKLHLAEDLQSADKSGKFIPSI 477


>gi|222612695|gb|EEE50827.1| hypothetical protein OsJ_31237 [Oryza sativa Japonica Group]
          Length = 550

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 234/359 (65%), Gaps = 6/359 (1%)

Query: 178 LFDSILYSYRMCDSSP-----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           L   +L + R+  + P        D+LF   A  KK   AT  F  MR +G LP + SCN
Sbjct: 163 LLHHVLLTARLTAARPDGGAVPALDVLFSVCARGKKLSLATLAFRAMRAHGLLPRVVSCN 222

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            F+S+ L   R +IAL F++EMRR RISPN+YT NMV+ AFC LG    A EV   M   
Sbjct: 223 VFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEW 282

Query: 293 GFIPSVTTYNTLISGHCNKGL-LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           G   +  ++NTLI+ +C  G+    A++ K  ME+ G+ P+V+T++T+I G CK+G++ +
Sbjct: 283 GVGRTTVSFNTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGK 342

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN++ SEM+   V PN VTYNTLI+GY  +G++ M   ++EEM++N +++DI+TYNALIL
Sbjct: 343 ANQVLSEMRVKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALIL 402

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC EGK KK  +L+++LD+  L PNAST+SALI G C  +NSERA QL   M +SG  P
Sbjct: 403 GLCNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHP 462

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           N   ++M++S+FC+N+D + A +V+ +ML +C+APD  +L+E + GL    K  LA  L
Sbjct: 463 NYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENL 521



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 54/117 (46%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +E+ R ++ PN  T + ++  +CK+   ERA+++   M+  GF P+ TTY  +IS  C  
Sbjct: 418 RELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKN 477

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             L  A+     M    I P+    N    G  K  KLH A  + S        P+V
Sbjct: 478 KDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKKLHLAENLRSLNNGLKFIPDV 534


>gi|357138636|ref|XP_003570896.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Brachypodium distachyon]
          Length = 500

 Score =  315 bits (807), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 225/336 (66%), Gaps = 1/336 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            D+LF   A   K   AT  F  MR +G LP +ESCN F+S+ L  +R +IA+ F+++MR
Sbjct: 136 IDVLFSACARANKLSQATLAFRAMRAHGLLPRVESCNTFISAALRLKRPEIAVAFFRQMR 195

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLL 314
           R  ISP+ YT NM++ AFC LG +  A ++   M   G   +V ++NTLI+ +C   G L
Sbjct: 196 RCCISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGL 255

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++ K  MEK G  P+ +T+NT+I G CK+ ++ +AN++  EM+   V+PN VTYN L
Sbjct: 256 ENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNML 315

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+  +G+++  + + EEM++NG+++DI+TYN LILGLC+EGK K++ +L+++LDK  L
Sbjct: 316 IHGHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGL 375

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PNAST++ALITG    +NSERA QL   M +SG  PN   F++++STFC+N+DF+ A +
Sbjct: 376 EPNASTFAALITGHWKTQNSERALQLLNVMKKSGFHPNYDTFKIVVSTFCKNKDFEGAVD 435

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           V+ ++L +CMAPD  +L E + GL    K  LA  L
Sbjct: 436 VMKDILGRCMAPDKALLHEFFDGLSKAKKLHLAEDL 471



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 2/286 (0%)

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           ++++  A  +   + +A   F+ M + G +P V + NT IS         +A+ F   M 
Sbjct: 136 IDVLFSACARANKLSQATLAFRAMRAHGLLPRVESCNTFISAALRLKRPEIAVAFFRQMR 195

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV-GNS 384
           +  I P+  T N ++  FC  G++ +A ++  EM    V   VV++NTLI  Y +  G  
Sbjct: 196 RCCISPDTYTANMMLAAFCALGRVADAAKMLDEMPEWGVYRTVVSFNTLIAAYCRGHGGL 255

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E    L   M + G   D +TYN +I GLCKE + ++A  L+ ++    + PN  TY+ L
Sbjct: 256 ENALELKRRMEKEGCAPDAVTYNTIIHGLCKERQMRQANQLLIEMRVMRVAPNTVTYNML 315

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G  +  +++ A ++ + M+++G + +   +  L+   C+      +  +L E+ ++ +
Sbjct: 316 IHGHVMLGDNKTASRVREEMVKNGLQLDIVTYNTLILGLCREGKVKESEHLLQELDKRGL 375

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            P++   + L +G       E A++L   M+  G  P  +D  + +
Sbjct: 376 EPNASTFAALITGHWKTQNSERALQLLNVMKKSGFHP-NYDTFKIV 420


>gi|219363531|ref|NP_001137052.1| uncharacterized protein LOC100217224 [Zea mays]
 gi|194698168|gb|ACF83168.1| unknown [Zea mays]
          Length = 338

 Score =  311 bits (797), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 144/313 (46%), Positives = 215/313 (68%), Gaps = 1/313 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR +G  P +ESCN F+S  L   R +IA+ F++EMRR R+SPNVYT+NMVM A C LG 
Sbjct: 1   MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           +  A ++   M   GF  +  ++NTLI+ +C + G +   ++ K  ME+ G+ PN +T+N
Sbjct: 61  VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYN 120

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T++ G CK+G++H+A RI +EM+   V+PN +T+NTLI+ Y  +G++E+   ++EEM++ 
Sbjct: 121 TIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKA 180

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  D++TYNALILGLC EGKT KA+ LV++L    L PNAST+SALI GQC ++N ERA
Sbjct: 181 GLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIGQCKKQNPERA 240

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L  +M ++G +PN + + +L+STF +N+DF+ A +VL +ML +C+APD  +L E + G
Sbjct: 241 LDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMRCIAPDKALLHEFFEG 300

Query: 518 LHHCGKDELAMKL 530
           L    K  LA  L
Sbjct: 301 LSKAKKLHLAADL 313



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 5/256 (1%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M + G  P+V + N  ISG        +A+ F   M +  + PNV T N ++   C  G+
Sbjct: 1   MRAHGMFPTVESCNVFISGALRLRRPEIAISFFREMRRCRVSPNVYTVNMVMRAKCALGR 60

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQ-VGNSEMGASLYEEMLRNGIKVDILTYN 407
           + +A ++  EM     S    ++NTLI  Y    G  E    L E M R G+  + +TYN
Sbjct: 61  VVDAAQLLDEMPCWGFSRTAASFNTLIAAYCHDSGGMETVLRLKERMEREGLVPNEVTYN 120

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            ++ GLCKEG+  +A  +V ++    + PN  T++ LI       ++E A ++++ M+++
Sbjct: 121 TIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLGDNEVAMKMHEEMMKA 180

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD--E 525
           G   +   +  L+   C      +A++++ E+    + P++   S L  G   C K   E
Sbjct: 181 GLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFSALIIG--QCKKQNPE 238

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ L   M+  G  P
Sbjct: 239 RALDLLNAMKKAGFQP 254



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 95/208 (45%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P   + N  +  L    R+  A     EMR   ++PN  T N ++H++  LG
Sbjct: 106 RMEREGLVPNEVTYNTIVHGLCKEGRMHQARRIVNEMRVKGVTPNTITFNTLIHSYVTLG 165

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             E A+++ + M   G    + TYN LI G CN+G    A +    +    ++PN  TF+
Sbjct: 166 DNEVAMKMHEEMMKAGLSADLVTYNALILGLCNEGKTWKASQLVQELCAAKLEPNASTFS 225

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CKK     A  + + MK     PN  TY+ LI+ + +  + E    + ++ML  
Sbjct: 226 ALIIGQCKKQNPERALDLLNAMKKAGFQPNYYTYSILISTFSKNKDFEGAIDVLKDMLMR 285

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYL 425
            I  D    +    GL K  K   AA L
Sbjct: 286 CIAPDKALLHEFFEGLSKAKKLHLAADL 313


>gi|125531614|gb|EAY78179.1| hypothetical protein OsI_33227 [Oryza sativa Indica Group]
          Length = 342

 Score =  308 bits (788), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 148/313 (47%), Positives = 216/313 (69%), Gaps = 1/313 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR +G LP + SCN F+S+ L   R +IAL F++EMRR RISPN+YT NMV+ AFC LG 
Sbjct: 1   MRAHGLLPRVVSCNVFISAALGLRRPEIALSFFREMRRCRISPNIYTANMVLRAFCDLGR 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL-LSLAMKFKNLMEKNGIQPNVITFN 337
              A EV   M   G   +  +++TLI+ +C  G+    A++ K  ME+ G+ P+V+T++
Sbjct: 61  TADAAEVLDKMPEWGVGRTPVSFHTLIAAYCRDGVDAGPALQLKMKMEQEGLVPDVVTYD 120

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I G CK+G++ +AN++ SEM+A  V PN VTYNTLI+GY  +G++ M   ++EEM++N
Sbjct: 121 TIIHGLCKEGRMGKANQVLSEMRAKGVMPNTVTYNTLIHGYVALGDNAMAGRVHEEMVKN 180

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +++DI+TYNALILGL  EGK KK  +L+++LD+  L PNAST+SALI G C  +NSERA
Sbjct: 181 RVELDIVTYNALILGLFNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERA 240

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            QL   M +SG  PN   ++M++S+FC+N+D + A +V+ +ML +C+APD  +L+E + G
Sbjct: 241 LQLLNVMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDG 300

Query: 518 LHHCGKDELAMKL 530
           L    K  LA  L
Sbjct: 301 LWKAKKLHLAENL 313



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 38/276 (13%)

Query: 181 SILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           S     R C  SP ++  +++ + +    +  +A +   +M ++G      S +  +++ 
Sbjct: 31  SFFREMRRCRISPNIYTANMVLRAFCDLGRTADAAEVLDKMPEWGVGRTPVSFHTLIAAY 90

Query: 239 L-DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
             D      AL    +M +  + P+V T + ++H  CK G + +A +V   M + G +P+
Sbjct: 91  CRDGVDAGPALQLKMKMEQEGLVPDVVTYDTIIHGLCKEGRMGKANQVLSEMRAKGVMPN 150

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------------------- 330
             TYNTLI G+   G  ++A +    M KN ++                           
Sbjct: 151 TVTYNTLIHGYVALGDNAMAGRVHEEMVKNRVELDIVTYNALILGLFNEGKMKKVEHLLR 210

Query: 331 --------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
                   PN  TF+ LI G+CK      A ++ + MK +   PN  TY  +I+ + +  
Sbjct: 211 ELDRAKLEPNASTFSALIVGWCKMQNSERALQLLNVMKKSGFHPNYTTYKMVISSFCKNK 270

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           + E    +  +ML   I  D    N    GL K  K
Sbjct: 271 DLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAKK 306



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 62/141 (43%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I + N  +  L +  ++       +E+ R ++ PN  T + ++  +CK+   ERA+++  
Sbjct: 186 IVTYNALILGLFNEGKMKKVEHLLRELDRAKLEPNASTFSALIVGWCKMQNSERALQLLN 245

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M+  GF P+ TTY  +IS  C    L  A+     M    I P+    N    G  K  
Sbjct: 246 VMKKSGFHPNYTTYKMVISSFCKNKDLEGAVDVMGDMLGRCIAPDKALLNEFFDGLWKAK 305

Query: 348 KLHEANRIFSEMKATNVSPNV 368
           KLH A  + S        P+V
Sbjct: 306 KLHLAENLRSLNNGLKFIPDV 326


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 160/502 (31%), Positives = 259/502 (51%), Gaps = 45/502 (8%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHS--IVLHILTKNR 154
           L +LS+  TP    + LLK Q D  L+L+F TW + H       ++H   + LHILT+ +
Sbjct: 48  LDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHP----FFDSHCKCLSLHILTRFK 103

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
            +K+++++ + +  S S    S +F  +  SY + +SS  VFDL+ K+Y+H      A +
Sbjct: 104 LYKTAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVN 163

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG---FYKEMRRNRISPNVYTLNMVMH 271
           T    +  GF+P + S N  L +++ S R  + L     Y+EM R+R+SPNVYT N+++ 
Sbjct: 164 TINLAKSSGFMPGVLSYNSVLDAIVRS-RGSVKLSAEEVYREMIRSRVSPNVYTYNILIR 222

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC +G +++ +  F  ME  G +P+V TYNTLI  +C  G +  A      M   G+QP
Sbjct: 223 GFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQP 282

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+I++N +I G C++G + EA  I  EM     +P+ VTYNTL+NGY + GN      ++
Sbjct: 283 NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIH 342

Query: 392 EEMLRNGIKVDILTYNALILGLCK-----------------------------------E 416
            EM+RNG+   ++TY ALI  +CK                                   +
Sbjct: 343 AEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQ 402

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A  ++ ++ ++   P+  TY+A I G CV +  E A  + + M+  G  P+   +
Sbjct: 403 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSY 462

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             ++S FC+  + DRA ++  EM+EK ++PD++  S L  GL    +   A  L ++M  
Sbjct: 463 STIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 522

Query: 537 RGLLPKGFDKLRTINCAPENGE 558
            GL P  F     IN     G+
Sbjct: 523 MGLPPDEFTYTTLINAYCVEGD 544



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 35/374 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L + +    + +     F +M   G LP + + N  + +     R+D A G  K M 
Sbjct: 217 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 276

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              + PN+ + N++++  C+ G ++ A E+ + M   GF P   TYNTL++G+C +G   
Sbjct: 277 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 336

Query: 313 --------------------------------LLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                            L+ AM+F + M   G++PN  T+ TLI
Sbjct: 337 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 396

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GF ++G L+EA RI +EM  +  SP+VVTYN  I+G+  +   E    + +EM+  G+ 
Sbjct: 397 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 456

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+++Y+ +I G C++G+  +A  + +++ +  + P+A TYS+LI G C  +    A  L
Sbjct: 457 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M+  G  P++  +  L++ +C   D ++A  +  EM+ K   PD++  S L +GL+ 
Sbjct: 517 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNK 576

Query: 521 CGKDELAMKLFRKM 534
             +   A +L  K+
Sbjct: 577 QARTREAKRLLFKL 590



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 172/347 (49%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++          + A +   +M   GF P   + N  L+          AL  + EM 
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           RN +SP+V T   ++++ CK   + RA+E F  M   G  P+  TY TLI G   +GLL+
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  N M ++G  P+V+T+N  I G C   ++ EA  +  EM    ++P+VV+Y+T+I
Sbjct: 407 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 466

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ + G  +    + +EM+  G+  D +TY++LI GLC+  +  +A  L +++    L 
Sbjct: 467 SGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP 526

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI   CV  +  +A  L+  MI  G  P+   + +L++   +      A  +
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
           L +++ +   P  +    L   + +C   E    + L +   ++GL+
Sbjct: 587 LFKLIYEESVPSDVTYDTL---IENCSNIEFKSVVALIKGFCMKGLM 630



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 177/397 (44%), Gaps = 21/397 (5%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+    S     ++ + +   Y+      + ++ L   Y     F  A     +M  
Sbjct: 290 IINGLCREGSMKEAWEILEEM--GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 347

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++S+  +  ++ A+ F+ +MR   + PN  T   ++  F + G++  
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M   GF PSV TYN  I GHC    +  A+     M + G+ P+V++++T+I 
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 467

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC+KG+L  A ++  EM    VSP+ VTY++LI G  ++        L +EML  G+  
Sbjct: 468 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 527

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY  LI   C EG   KA +L  ++     +P+A TYS LI G   +  +  A +L 
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587

Query: 462 KSMIRSGCRPNKHIFEMLMST---------------FCQNEDFDRAAEVLLEMLEKCMAP 506
             +I     P+   ++ L+                 FC       A  V   M+E+   P
Sbjct: 588 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 647

Query: 507 DSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
              + + +  G  HC    L  A  L+++M   G +P
Sbjct: 648 GEAVYNVIIHG--HCRGGNLPKAFNLYKEMIHSGFVP 682



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 169/400 (42%), Gaps = 50/400 (12%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + +  L  +    +    A + F QMR  G  P   +    +        ++ A    
Sbjct: 353 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM  +  SP+V T N  +H  C L  +E A+ V + M   G  P V +Y+T+ISG C K
Sbjct: 413 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 472

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A + K  M + G+ P+ +T+++LI G C+  +L EA  +  EM    + P+  TY
Sbjct: 473 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 532

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV----- 426
            TLIN Y   G+      L++EM+  G   D +TY+ LI GL K+ +T++A  L+     
Sbjct: 533 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 592

Query: 427 -----KDLDKNSLV----------------------------------------PNASTY 441
                 D+  ++L+                                        P  + Y
Sbjct: 593 EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 652

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I G C   N  +AF LYK MI SG  P+      L+    +    +  +EV+ + L 
Sbjct: 653 NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 712

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C   ++ +   L    H  G  E  + +   M   GLLP
Sbjct: 713 SCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLP 752



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 152/364 (41%), Gaps = 52/364 (14%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L   ++ +     A     +M + GF P + + N F+      ER++ ALG  +EM 
Sbjct: 392 YTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMV 451

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+V + + ++  FC+ G ++RA ++ + M   G  P   TY++LI G C    L+
Sbjct: 452 EKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLT 511

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   G+ P+  T+ TLI  +C +G L++A  +  EM      P+ VTY+ LI
Sbjct: 512 EACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLI 571

Query: 376 NGYGQVGNSEMGASL-----YEEMLRNGIKVDIL-------------------------- 404
           NG  +   +     L     YEE + + +  D L                          
Sbjct: 572 NGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMH 631

Query: 405 -------------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                               YN +I G C+ G   KA  L K++  +  VP+  T   LI
Sbjct: 632 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLI 691

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNK-HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
                   +E   ++    +RS CR N+  + ++L+    +  + +    VL +M +  +
Sbjct: 692 KALFKEGMNEEMSEVIGDTLRS-CRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGL 750

Query: 505 APDS 508
            P+S
Sbjct: 751 LPNS 754


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 252/485 (51%), Gaps = 42/485 (8%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           ++LT LS+H TP    ++LLK Q D  L L+F  W ++ +    + +   + LHILT+ +
Sbjct: 36  EQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQ--FFSFQCKCLALHILTRYK 93

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
            +K+++S+   ++ +   +    LF  +  SY  C SS  VFDL+ K+ A       A  
Sbjct: 94  LYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALS 153

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
                + YGF+P + S N  L +++ +++ V IA G +KEM  + +SPNVYT N+++  F
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C  G +E  +  F  ME  G +P+V TYNT+I  +C    +  A K   LM   G+ PN+
Sbjct: 214 CTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           I++N +I G C++G++ E + I  EM      P+ VT+NTLINGY  VGN      L+ E
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 394 MLRNGIKVDILTYNALILGLCKEGK----------------------------------- 418
           M++NG+  +++TY  LI  +CK G                                    
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A  ++K++ +N   P   TY+ALI G C+    E A  L + MI  G  P+   +  
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA--MKLFRKMEI 536
           ++S FC+N++ ++A ++ +EM+ K ++PD    S L  GL  C +  L     LF++M  
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL--CKQRRLGEVCDLFQEMLS 511

Query: 537 RGLLP 541
            GL P
Sbjct: 512 LGLPP 516



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 188/373 (50%), Gaps = 2/373 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG   + + ++    F  +      C  + + ++ +   Y   +K   A      M  
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEM--ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMAL 266

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + S N  ++ L    ++       +EM + R  P+  T N +++ +C +G   +
Sbjct: 267 KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQ 326

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +   M   G  P+V TY TLI+  C  G L+ AM+F + M   G+ PN  T+ TLI 
Sbjct: 327 ALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID 386

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF ++G L +A +I  EM     +P ++TYN LING+  +G  E  + L +EM+  G   
Sbjct: 387 GFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIP 446

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ +I G C+  + +KA  L  ++    + P+ +TYS+LI G C ++       L+
Sbjct: 447 DVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLF 506

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+  G  P++  +  L++ +C   D D+A  +  EM++K  +PD +  + L +G +  
Sbjct: 507 QEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQ 566

Query: 522 GKDELAMKLFRKM 534
            + + A +L  K+
Sbjct: 567 SRTKEAKRLLLKL 579



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 165/322 (51%), Gaps = 15/322 (4%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QMRD G  P   +    +        +  A    KEM  N  +P + T N +++  C LG
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A  + + M   GFIP V +Y+T+ISG C    L  A + K  M   GI P+V T++
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G CK+ +L E   +F EM +  + P+ VTY +LIN Y   G+ +    L++EM++ 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS--------------- 442
           G   DI+TYN LI G  K+ +TK+A  L+  L     VPN  TY+               
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           AL+ G C++     A ++ +SM++ G + N+ ++ +++    +  + ++A  +  EML  
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 503 CMAPDSIILSELYSGLHHCGKD 524
             AP S+ +  L   L+H GK+
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKE 689



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 178/347 (51%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        + +  ++   +M    ++P   + N  ++   +      AL  + EM 
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +N +SPNV T   ++++ CK G + RA+E    M   G  P+  TY TLI G   +G L 
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M +NG  P +IT+N LI G C  G++ +A+ +  EM      P+VV+Y+T+I
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ +    E    L  EM+  GI  D+ TY++LI GLCK+ +  +   L +++    L 
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++LI   C+  + ++A +L+  MI+ G  P+   + +L++ F +      A  +
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
           LL++L +   P+ I  + L   + +C   E   A+ L +   ++GL+
Sbjct: 576 LLKLLYEESVPNEITYNTL---IDNCNNLEFKSALALMKGFCMKGLM 619



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 20/355 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    +  +A+    +M + GF+P + S +  +S    ++ ++ A     E
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ISP+V T + ++   CK   +    ++F+ M S+G  P   TY +LI+ +C +G 
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++  + M + G  P+++T+N LI GF K+ +  EA R+  ++      PN +TYNT
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+      N E  ++L                 AL+ G C +G   +A  +++ + +  
Sbjct: 594 LID---NCNNLEFKSAL-----------------ALMKGFCMKGLMNEADRVLESMLQKG 633

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              N   Y+ +I G     N E+A+ LYK M+ SG  P+      L  +           
Sbjct: 634 YKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN 693

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
           ++L   L+ C   ++ +   L       G  +    + + M + GLLP     LR
Sbjct: 694 QLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSANLR 748


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/485 (32%), Positives = 252/485 (51%), Gaps = 42/485 (8%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           ++LT LS+H TP    ++LLK Q D  L L+F  W ++ +    + +   + LHILT+ +
Sbjct: 36  EQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQ--FFSFQCKCLALHILTRYK 93

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
            +K+++S+   ++ +   +    LF  +  SY  C SS  VFDL+ K+ A       A  
Sbjct: 94  LYKTAQSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVNLINKALS 153

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
                + YGF+P + S N  L +++ +++ V IA G +KEM  + +SPNVYT N+++  F
Sbjct: 154 IVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGF 213

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C  G +E  +  F  ME  G +P+V TYNT+I  +C    +  A K   LM   G+ PN+
Sbjct: 214 CTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNL 273

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           I++N +I G C++G++ E + I  EM      P+ VT+NTLINGY  VGN      L+ E
Sbjct: 274 ISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAE 333

Query: 394 MLRNGIKVDILTYNALILGLCKEGK----------------------------------- 418
           M++NG+  +++TY  LI  +CK G                                    
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGF 393

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A  ++K++ +N   P   TY+ALI G C+    E A  L + MI  G  P+   +  
Sbjct: 394 LKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYST 453

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA--MKLFRKMEI 536
           ++S FC+N++ ++A ++ +EM+ K ++PD    S L  GL  C +  L     LF++M  
Sbjct: 454 IISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGL--CKQRRLGEVCDLFQEMLS 511

Query: 537 RGLLP 541
            GL P
Sbjct: 512 LGLPP 516



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 178/346 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ +   Y   +K   A      M   G  P + S N  ++ L    ++    
Sbjct: 234 CLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETS 293

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM + R  P+  T N +++ +C +G   +A+ +   M   G  P+V TY TLI+  
Sbjct: 294 EILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSM 353

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L+ AM+F + M   G+ PN  T+ TLI GF ++G L +A +I  EM     +P +
Sbjct: 354 CKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTI 413

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN LING+  +G  E  + L +EM+  G   D+++Y+ +I G C+  + +KA  L  +
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+ +TYS+LI G C ++       L++ M+  G  P++  +  L++ +C   D
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D+A  +  EM++K  +PD +  + L +G +   + + A +L  K+
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 165/322 (51%), Gaps = 15/322 (4%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QMRD G  P   +    +        +  A    KEM  N  +P + T N +++  C LG
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG 427

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A  + + M   GFIP V +Y+T+ISG C    L  A + K  M   GI P+V T++
Sbjct: 428 RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYS 487

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G CK+ +L E   +F EM +  + P+ VTY +LIN Y   G+ +    L++EM++ 
Sbjct: 488 SLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQK 547

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS--------------- 442
           G   DI+TYN LI G  K+ +TK+A  L+  L     VPN  TY+               
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSAL 607

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           AL+ G C++     A ++ +SM++ G + N+ ++ +++    +  + ++A  +  EML  
Sbjct: 608 ALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHS 667

Query: 503 CMAPDSIILSELYSGLHHCGKD 524
             AP S+ +  L   L+H GK+
Sbjct: 668 GFAPHSVTIMALAKSLYHEGKE 689



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 178/347 (51%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        + +  ++   +M    ++P   + N  ++   +      AL  + EM 
Sbjct: 276 YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMV 335

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +N +SPNV T   ++++ CK G + RA+E    M   G  P+  TY TLI G   +G L 
Sbjct: 336 KNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLK 395

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M +NG  P +IT+N LI G C  G++ +A+ +  EM      P+VV+Y+T+I
Sbjct: 396 QAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTII 455

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ +    E    L  EM+  GI  D+ TY++LI GLCK+ +  +   L +++    L 
Sbjct: 456 SGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLP 515

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++LI   C+  + ++A +L+  MI+ G  P+   + +L++ F +      A  +
Sbjct: 516 PDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRL 575

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
           LL++L +   P+ I  + L   + +C   E   A+ L +   ++GL+
Sbjct: 576 LLKLLYEESVPNEITYNTL---IDNCNNLEFKSALALMKGFCMKGLM 619



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 160/355 (45%), Gaps = 20/355 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    +  +A+    +M + GF+P + S +  +S    ++ ++ A     E
Sbjct: 414 ITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVE 473

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ISP+V T + ++   CK   +    ++F+ M S+G  P   TY +LI+ +C +G 
Sbjct: 474 MVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGD 533

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++  + M + G  P+++T+N LI GF K+ +  EA R+  ++      PN +TYNT
Sbjct: 534 LDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNT 593

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+      N E  ++L                 AL+ G C +G   +A  +++ + +  
Sbjct: 594 LID---NCNNLEFKSAL-----------------ALMKGFCMKGLMNEADRVLESMLQKG 633

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              N   Y+ +I G     N E+A+ LYK M+ SG  P+      L  +           
Sbjct: 634 YKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELN 693

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
           ++L   L+ C   ++ +   L       G  +    + + M + GLLP     LR
Sbjct: 694 QLLDYTLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSANLR 748


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 163/505 (32%), Positives = 255/505 (50%), Gaps = 41/505 (8%)

Query: 96  KLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
           +L  LS + TP    ++LLK Q D  L L+F  W   H+    TL    I LHILTK + 
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQ--FFTLRCKCITLHILTKFKL 95

Query: 156 FKSSESILRGILDSDSFD--LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           +K+++ IL   + + + D    S +F S+  +Y +C S+  VFDL+ K+Y+       A 
Sbjct: 96  YKTAQ-ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 154

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHA 272
                 + +GF+P + S N  L + + S+R +  A   +KEM  +++SPNV+T N+++  
Sbjct: 155 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           FC  G I+ A+ +F  ME+ G +P+V TYNTLI G+C    +    K    M   G++PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           +I++N +I G C++G++ E + + +EM     S + VTYNTLI GY + GN      ++ 
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKA------------------------------ 422
           EMLR+G+   ++TY +LI  +CK G   +A                              
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394

Query: 423 ----AYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               AY V ++++ N   P+  TY+ALI G CV    E A  + + M   G  P+   + 
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            ++S FC++ D D A  V  EM+EK + PD+I  S L  G     + + A  L+ +M   
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P  F     IN     G+ E  
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKA 539



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 192/373 (51%), Gaps = 2/373 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG   + + D+   LFD +    + C  + + ++ L   Y   +K  +       M  
Sbjct: 211 LIRGFCFAGNIDVALTLFDKM--ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + S N  ++ L    R+        EM R   S +  T N ++  +CK G   +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +   M   G  PSV TY +LI   C  G ++ AM+F + M   G+ PN  T+ TL+ 
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF +KG ++EA R+  EM     SP+VVTYN LING+   G  E   ++ E+M   G+  
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ ++ G C+     +A  + +++ +  + P+  TYS+LI G C ++ ++ A  LY
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+R G  P++  +  L++ +C   D ++A ++  EM+EK + PD +  S L +GL+  
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 522 GKDELAMKLFRKM 534
            +   A +L  K+
Sbjct: 569 SRTREAKRLLLKL 581



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 149/263 (56%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  + EM R+ ++P+V T   ++H+ CK G + RA+E    M   G  P+  TY TL+ 
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G   KG ++ A +    M  NG  P+V+T+N LI G C  GK+ +A  +  +MK   +SP
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VV+Y+T+++G+ +  + +    +  EM+  GIK D +TY++LI G C++ +TK+A  L 
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ +  L P+  TY+ALI   C+  + E+A QL+  M+  G  P+   + +L++   + 
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 487 EDFDRAAEVLLEMLEKCMAPDSI 509
                A  +LL++  +   P  +
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDV 591



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 15/362 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L K Y     F  A     +M  +G  P + +    + S+  +  ++ A+ F  +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + PN  T   ++  F + G +  A  V + M   GF PSV TYN LI+GHC  G 
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+     M++ G+ P+V++++T++ GFC+   + EA R+  EM    + P+ +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ +   ++    LYEEMLR G+  D  TY ALI   C EG  +KA  L  ++ +  
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST----------- 482
           ++P+  TYS LI G   +  +  A +L   +      P+   +  L+             
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610

Query: 483 ----FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
               FC       A +V   ML K   PD    + +  G    G    A  L+++M   G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670

Query: 539 LL 540
            L
Sbjct: 671 FL 672



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 15/321 (4%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QMR  G  P   +    +        ++ A    +EM  N  SP+V T N +++  C  G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+ V ++M+  G  P V +Y+T++SG C    +  A++ K  M + GI+P+ IT++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI GFC++ +  EA  ++ EM    + P+  TY  LIN Y   G+ E    L+ EM+  
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS--------------- 442
           G+  D++TY+ LI GL K+ +T++A  L+  L     VP+  TY                
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +LI G C++     A Q+++SM+    +P+   + +++   C+  D  +A  +  EM++ 
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669

Query: 503 CMAPDSIILSELYSGLHHCGK 523
                ++ +  L   LH  GK
Sbjct: 670 GFLLHTVTVIALVKALHKEGK 690



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 140/331 (42%), Gaps = 50/331 (15%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   +    K  +A      M++ G  P + S +  LS    S  VD AL   
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +EM    I P+  T + ++  FC+    + A ++++ M  +G  P   TY  LI+ +C +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFN---------------------------------- 337
           G L  A++  N M + G+ P+V+T++                                  
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593

Query: 338 ----------------TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
                           +LI GFC KG + EA+++F  M   N  P+   YN +I+G+ + 
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+     +LY+EM+++G  +  +T  AL+  L KEGK  +   ++  + ++  +  A   
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             L+       N +    +   M + G  PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 158/476 (33%), Positives = 237/476 (49%), Gaps = 5/476 (1%)

Query: 69  RTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFT 128
           R++  P  Q L    I+   L    W +L        P      LL    D  L L FF 
Sbjct: 8   RSIQGPILQSLSIPTIS-ELLSKQHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFK 66

Query: 129 WVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
           W Q     S  LE  S VLH L  ++++    S L   + ++   + S +F S+L     
Sbjct: 67  WSQKEYRLSYGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSS-VFHSLLLDGGR 125

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
             ++ L+ D+L   Y    +   A + F + +DYGF   + SCN  LS+L+   ++    
Sbjct: 126 PGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVE 185

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             YKEM + RI  N+ T N+ ++  C+ G + +A +  ++M++ G  P+V TYNTL+ G+
Sbjct: 186 YVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGY 245

Query: 309 CNKGLLSLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           C +G      K +  M++   N I PN +TFNTLI GFCK   +  A + F EM+   + 
Sbjct: 246 CKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLK 305

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN+VTYN+LING    G  E    L+++M+  G+K +I+TYNALI G CK+   K+A  +
Sbjct: 306 PNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKV 365

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             D+ K  LVPN  T++ +I   C     E  F L  SM+  G  PN   +  L++  C+
Sbjct: 366 FDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCR 425

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +D   A E+L EM  K +  D +  + L  GL    K   A KL  +M   GL P
Sbjct: 426 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKP 481



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 173/349 (49%), Gaps = 3/349 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL---DSERVDIALGFYK 252
           F++         K   A D    M+ +G  P + + N  +        + ++  A  F K
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM  N+I PN  T N ++  FCK   +  A + F+ M+  G  P++ TYN+LI+G CN G
Sbjct: 263 EMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNG 322

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A+   + M   G++PN++T+N LI GFCKK  + EA ++F ++    + PNV+T+N
Sbjct: 323 KLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFN 382

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T+I+ Y + G  E G SL   ML  GI  ++ TYN LI GLC++   + A  L+ +++  
Sbjct: 383 TMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENK 442

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L  +  TY+ LI G C    S  A +L   M   G +PN   +  LM  +C       A
Sbjct: 443 GLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             V   M ++   P+ +  + L  G     K E A  L  +M  +GL P
Sbjct: 503 LNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNP 551



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 149/276 (53%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +      E V  A   ++EM++  + PN+ T N +++  C  G +E A++++  M  
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG 336

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G  P++ TYN LI+G C K ++  A K  + + K  + PNVITFNT+I  +CK+G + E
Sbjct: 337 LGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEE 396

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              + S M    + PNV TYN LI G  +  + +    L  EM   G+K D++TYN LI 
Sbjct: 397 GFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILID 456

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK  K++ A  L+ ++    L PN  TY+ L+ G C+    + A  +   M +   +P
Sbjct: 457 GLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQP 516

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           N   + +L+  +C+    + A  +L EMLEK + P+
Sbjct: 517 NVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPN 552



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 157/314 (50%), Gaps = 16/314 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +   +    A   F +M+  G  P I + N  ++ L ++ +++ A+  + +
Sbjct: 274 VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN+ T N +++ FCK  +++ A +VF ++     +P+V T+NT+I  +C +G+
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGM 393

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +       + M   GI PNV T+N LI G C+K  L  A  + +EM+   +  +VVTYN 
Sbjct: 394 MEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNI 453

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  +   S     L  EM   G+K + +TYN L+ G C EGK K A  +   ++K  
Sbjct: 454 LIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKER 513

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  TY+ LI G C     E A  L   M+  G  PN+  +++               
Sbjct: 514 KQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI--------------- 558

Query: 494 EVLLEMLEKCMAPD 507
            V LEMLEK  +PD
Sbjct: 559 -VRLEMLEKGFSPD 571


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 253/455 (55%), Gaps = 6/455 (1%)

Query: 89  LIHSDWKKLTA--LSTHLTPFRVKHVLLKVQKD-YVLSLEFFTWVQTHKPSSLTLETHSI 145
           ++   W  L    + ++LT   +  VLL +  D   +S  FF WV+++     +L++   
Sbjct: 21  VVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWT 80

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           ++H L K+++FK+++++L  I   D    PS L ++++  +   DS+  +   L   YA+
Sbjct: 81  MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVL-NAVVRIHDDPDSNSQILSWLVIFYAN 139

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            +  ++A   F  MR +GF P + +C   L+SL  +   ++    YK+M R  + PN++ 
Sbjct: 140 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 199

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+++HA CK G +E+A ++   MES    P + TYNTLIS +C KG+   A+  ++ ME
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 259

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           + G+ P+++T+N+LI+GFC++G++ EA R+F E+     +PN VTY TLI+GY +V + E
Sbjct: 260 RGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLE 317

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L E M   G+   ++TYN+++  LC+EGK K A  L+ ++ +  + P+  T + LI
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C   +   A ++ K M+ +G +P++  F+ L+  FC+  + D A E L EML+   +
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           P     S L    +     E  ++L  ++  +GL 
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 472



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 11/285 (3%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A++VF++M   GF P +     L++      L ++  K    M + G+ PN+  FN L
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   CK G + +A ++ +EM++  + P++ TYNTLI+ Y + G       + + M R G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI+TYN+LI G C+EG+ ++A  L +++  N   PN  TY+ LI G C   + E A +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M   G  P    +  ++   C+      A  +L EM E+ + PD++  + L +   
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381

Query: 520 HCGKDELAMKLFRKMEIRGLLPK---------GFDKLRTINCAPE 555
             G    AMK+ +KM   GL P          GF KL  ++ A E
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 100/224 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + +      K ++A     +M +    P   +CN  +++      +  A+   K+
Sbjct: 336 VTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKK 395

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H FCKL  ++ A E    M   GF PS +TY+ L+  + ++  
Sbjct: 396 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 455

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
               ++  + + + G+  ++  +  LI   CK  K+  A RIF+ M+   +  + V Y +
Sbjct: 456 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 515

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           L   Y + G +   + + +EM +  + + +  Y         +G
Sbjct: 516 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDG 559



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 2/238 (0%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+  + N  +   A++    M  +G +P++     L+    K    +   +++ +M    
Sbjct: 133 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG 192

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN+  +N LI+   + G+ E    L  EM    I  D+ TYN LI   CK+G   +A 
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   +++  + P+  TY++LI G C       A +L++ +  +G  PN   +  L+  +
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGY 310

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  D + A  +   M  + + P  +  + +   L   GK + A +L  +M  R + P
Sbjct: 311 CRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + N  L  L +  ++  A     EM   ++ P+  T N +++A+CK+G +  A
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++V K M   G  P   T+  LI G C    +  A +F   M   G  P+  T++ L+  
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS 449

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           +  +       R+  E+    +  ++  Y  LI    ++   E    ++  M   G+K D
Sbjct: 450 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            + Y +L     K GK   A+ ++ ++DK  L+     Y
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 253/455 (55%), Gaps = 6/455 (1%)

Query: 89  LIHSDWKKLTA--LSTHLTPFRVKHVLLKVQKD-YVLSLEFFTWVQTHKPSSLTLETHSI 145
           ++   W  L    + ++LT   +  VLL +  D   +S  FF WV+++     +L++   
Sbjct: 21  VVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWT 80

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           ++H L K+++FK+++++L  I   D    PS L ++++  +   DS+  +   L   YA+
Sbjct: 81  MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVL-NAVVRIHDDPDSNSQILSWLVIFYAN 139

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            +  ++A   F  MR +GF P + +C   L+SL  +   ++    YK+M R  + PN++ 
Sbjct: 140 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 199

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+++HA CK G +E+A ++   MES    P + TYNTLIS +C KG+   A+  ++ ME
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 259

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           + G+ P+++T+N+LI+GFC++G++ EA R+F E+     +PN VTY TLI+GY +V + E
Sbjct: 260 RGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGA--TPNHVTYTTLIDGYCRVNDLE 317

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L E M   G+   ++TYN+++  LC+EGK K A  L+ ++ +  + P+  T + LI
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C   +   A ++ K M+ +G +P++  F+ L+  FC+  + D A E L EML+   +
Sbjct: 378 NAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFS 437

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           P     S L    +     E  ++L  ++  +GL 
Sbjct: 438 PSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLF 472



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 11/285 (3%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A++VF++M   GF P +     L++      L ++  K    M + G+ PN+  FN L
Sbjct: 144 QDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVL 203

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   CK G + +A ++ +EM++  + P++ TYNTLI+ Y + G       + + M R G+
Sbjct: 204 IHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGV 263

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI+TYN+LI G C+EG+ ++A  L +++  N   PN  TY+ LI G C   + E A +
Sbjct: 264 SPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALR 321

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M   G  P    +  ++   C+      A  +L EM E+ + PD++  + L +   
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381

Query: 520 HCGKDELAMKLFRKMEIRGLLPK---------GFDKLRTINCAPE 555
             G    AMK+ +KM   GL P          GF KL  ++ A E
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 100/224 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + +      K ++A     +M +    P   +CN  +++      +  A+   K+
Sbjct: 336 VTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKK 395

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H FCKL  ++ A E    M   GF PS +TY+ L+  + ++  
Sbjct: 396 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 455

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
               ++  + + + G+  ++  +  LI   CK  K+  A RIF+ M+   +  + V Y +
Sbjct: 456 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 515

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           L   Y + G +   + + +EM +  + + +  Y         +G
Sbjct: 516 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDG 559



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 2/238 (0%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+  + N  +   A++    M  +G +P++     L+    K    +   +++ +M    
Sbjct: 133 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG 192

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN+  +N LI+   + G+ E    L  EM    I  D+ TYN LI   CK+G   +A 
Sbjct: 193 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 252

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   +++  + P+  TY++LI G C       A +L++ +  +G  PN   +  L+  +
Sbjct: 253 GIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGY 310

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  D + A  +   M  + + P  +  + +   L   GK + A +L  +M  R + P
Sbjct: 311 CRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEP 368



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + N  L  L +  ++  A     EM   ++ P+  T N +++A+CK+G +  A
Sbjct: 330 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 389

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++V K M   G  P   T+  LI G C    +  A +F   M   G  P+  T++ L+  
Sbjct: 390 MKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS 449

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           +  +       R+  E+    +  ++  Y  LI    ++   E    ++  M   G+K D
Sbjct: 450 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 509

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            + Y +L     K GK   A+ ++ ++DK  L+     Y
Sbjct: 510 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 235/456 (51%), Gaps = 4/456 (0%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           L +  W +L        P      L     D  L L FF W Q     S  LET   VLH
Sbjct: 27  LSNQHWSELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLH 86

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           +L  ++K+    S L  ++ ++   + S     +L   R C ++ L+ D+L   Y    +
Sbjct: 87  LLANSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPC-ANALITDMLVLAYVTNLE 145

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
             +A + F +++DYGF   + SCN  LS+L+           YKEM + RI PN+ T N+
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK-- 326
            ++  CK G + +A +V +++++ GF P++ TYNTLI GHC KG      +   ++++  
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265

Query: 327 -NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
            N I PN ITFNTLI GFCK   +  A   F EM+   + PN+VTYN+LING    G  +
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
              +L+++M+  G+K +I+T+NALI G CK+   K+A  L  D+ +  LVPNA T++ +I
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMI 385

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C     E  F L+ SM+  G  PN   +  L++  C+N++   A ++L EM    + 
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK 445

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D +  + L  G    G+   A KL  +M   G+ P
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKP 481



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 176/352 (50%), Gaps = 9/352 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL------SSLLDSERVDIALG 249
           F++         K   A D    ++ +GF P I + N  +       S     R D  L 
Sbjct: 203 FNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAIL- 261

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             KEM  N+I PN  T N ++  FCK   +  A   F+ M+  G  P++ TYN+LI+G  
Sbjct: 262 --KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLS 319

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N G L  A+   + M   G++PN++TFN LI GFCKK  + EA ++F ++   ++ PN +
Sbjct: 320 NNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAI 379

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NT+I+ + + G  E G +L+  ML  GI  ++ TYN LI GLC+    + A  L+ ++
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           +   L  +  TY+ LI G C      +A +L   M+  G +PN   +  LM  +C   + 
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A +V  +M ++    + +  + L  G    GK E A +L  +M  +GL P
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNP 551



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/331 (29%), Positives = 163/331 (49%), Gaps = 20/331 (6%)

Query: 180 DSIL---YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           D+IL    + ++C  + + F+ L   +   +    A + F +M+  G  P I + N  ++
Sbjct: 258 DAILKEMLANKIC-PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLIN 316

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L ++ ++D A+  + +M    + PN+ T N +++ FCK  +I+ A ++F ++     +P
Sbjct: 317 GLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVP 376

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+NT+I   C  G++       N M   GI PNV T+N LI G C+   +  A ++ 
Sbjct: 377 NAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLL 436

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +EM+   +  +VVTYN LI G+ + G       L  EML  G+K + +TYN L+ G C E
Sbjct: 437 NEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCME 496

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  K A  +   ++K     N  TY+ LI G C     E A +L   M+  G  PN+  +
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           ++                V LEMLEK   PD
Sbjct: 557 DV----------------VRLEMLEKGFIPD 571



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 142/335 (42%), Gaps = 43/335 (12%)

Query: 234 FLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           FL  L+ +E+  ++  F+  +   +R   N    +M++ A+     I  A EVF+ ++  
Sbjct: 100 FLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDY 159

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           GF  S+ + N L+S                                      K  +  E 
Sbjct: 160 GFKLSLNSCNPLLSA-----------------------------------LVKGNETGEM 184

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             ++ EM    + PN+ T+N  ING  + G       + E++   G   +I+TYN LI G
Sbjct: 185 QYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDG 244

Query: 413 LCKEG---KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
            CK+G   K  +A  ++K++  N + PN  T++ LI G C  +N   A   ++ M R G 
Sbjct: 245 HCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL 304

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--A 527
           +PN   +  L++    N   D A  +  +M+   + P+ +  + L +G   C K  +  A
Sbjct: 305 KPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGF--CKKKMIKEA 362

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            KLF  +  + L+P        I+   + G  E G
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEG 397


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 144/452 (31%), Positives = 232/452 (51%), Gaps = 9/452 (1%)

Query: 99  ALSTHLTPFRVKH---VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
            L  + + FR  H   VL+ ++ DY L L FF W    +  SL  E   IV  I T ++ 
Sbjct: 84  VLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSL--EARCIVAQIATASKD 141

Query: 156 FKSSESILRGILDSDSFDLP---SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
            K +  +++    + + D+        + ++Y+Y+   S P VFD+ F+          A
Sbjct: 142 LKMARKLIQDFWVNPNLDVGVSFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEA 201

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLL-DSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
              F +M +YG L  ++SCN F+S L  D + + IAL  + E     +  N  + N++ H
Sbjct: 202 RKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITH 261

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           + C+LG +  A ++   ME  G IP V +Y+T+I+G+C  G L   +K    M+  G++P
Sbjct: 262 SLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKP 321

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N  T+N +I   CK GK+ EA R+  EM +  ++P+ V Y TLI+G+ ++GN      L+
Sbjct: 322 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 381

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM +  I  D +TY A+I GLC+ G+  +A  L  ++    L P+  TY+ALI G C  
Sbjct: 382 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 441

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + AF L+  M++ G  PN   +  L    C+  + D A E+L EM  K +  +    
Sbjct: 442 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 501

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           + L +GL   G  + A+KL + ME+ G  P  
Sbjct: 502 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/326 (32%), Positives = 172/326 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM   G +P + S +  ++       +   L   +EM+   + PN YT N V+   CK G
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  V + M S G  P    Y TLI G C  G +S A +  + M+K  I P+ IT+ 
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYT 397

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G C+ G++ EA+++F EM    + P+ VTY  LI+GY + G  +   SL+ +ML+ 
Sbjct: 398 AVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQM 457

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  +I+TY AL  GLCK G+   A  L+ ++ +  L  N  TY++L+ G C   N ++A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L K M  +G  P+   +  LM  +C++ +  RA E+L +ML++ + P  +  + L +G
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNG 577

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKG 543
               G  E   KL + M  +G++P  
Sbjct: 578 FCMSGMLEDGEKLLKWMLEKGIMPNA 603



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 2/352 (0%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  +++ G+  +       KLF  ++   +  +   + +  L   Y    K + A   
Sbjct: 393 FITYTAVICGLCQTGRVMEADKLFHEMVC--KRLEPDEVTYTALIDGYCKEGKMKEAFSL 450

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             QM   G  P I +       L     VD A     EM R  +  N+YT N +++  CK
Sbjct: 451 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 510

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G I++AV++ K+ME  GF P   TY TL+  +C    +  A +    M    +QP V+T
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           FN L+ GFC  G L +  ++   M    + PN  TYN+LI  Y    N      +Y  M 
Sbjct: 571 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 630

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+  D  TYN LI G CK    K+A +L +D+         S+Y+ALI G   RK   
Sbjct: 631 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 690

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            A +L++ M R G   ++ I+ +           +   E+  E +EKC+  D
Sbjct: 691 EARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGD 742



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 140/302 (46%), Gaps = 5/302 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V  A   + EM++ +ISP+  T   V+   C+ G +  A ++F  M      P   TY  
Sbjct: 374 VSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTA 433

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G+C +G +  A    N M + G+ PN++T+  L  G CK G++  AN +  EM    
Sbjct: 434 LIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +  N+ TYN+L+NG  + GN +    L ++M   G   D +TY  L+   CK  +  +A 
Sbjct: 494 LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAH 553

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++ +    L P   T++ L+ G C+    E   +L K M+  G  PN   +  L+  +
Sbjct: 554 ELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C   +     E+   M  K + PD    + L  G  HC    +    F     R ++ KG
Sbjct: 614 CIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKG--HCKARNMKEAWFLH---RDMVGKG 668

Query: 544 FD 545
           F+
Sbjct: 669 FN 670



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 181/399 (45%), Gaps = 18/399 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ V+ +L K  K   +E +LR ++            D ++Y+             L  
Sbjct: 325 TYNGVILLLCKTGKVAEAERVLREMISEGIAP------DGVIYT------------TLID 366

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +       +A   F +M+     P   +    +  L  + RV  A   + EM   R+ P
Sbjct: 367 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 426

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T   ++  +CK G ++ A  +   M  MG  P++ TY  L  G C  G +  A +  
Sbjct: 427 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 486

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++ N+ T+N+L+ G CK G + +A ++  +M+     P+ VTY TL++ Y + 
Sbjct: 487 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
                   L  +ML   ++  ++T+N L+ G C  G  +    L+K + +  ++PNA+TY
Sbjct: 547 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 606

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++LI   C+R N     ++Y+ M   G  P+ + + +L+   C+  +   A  +  +M+ 
Sbjct: 607 NSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 666

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           K         + L  G +   K   A +LF +M   GL+
Sbjct: 667 KGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLV 705



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 140/284 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + +M +  ++PN+ T   +    CK G ++ A E+   M   G   ++ TYN+L++
Sbjct: 447 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 506

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G +  A+K    ME  G  P+ +T+ TL+  +CK  ++  A+ +  +M    + P
Sbjct: 507 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 566

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            VVT+N L+NG+   G  E G  L + ML  GI  +  TYN+LI   C     +    + 
Sbjct: 567 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 626

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +    +VP+ +TY+ LI G C  +N + A+ L++ M+  G       +  L+  F + 
Sbjct: 627 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 686

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           + F  A E+  +M  + +  D  I +      +  GK EL ++L
Sbjct: 687 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 730



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 2/247 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  + + D   KL   +  +    D+  + +  L   Y   ++   A +   QM 
Sbjct: 503 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA--VTYTTLMDAYCKSREMVRAHELLRQML 560

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D    P + + N  ++    S  ++      K M    I PN  T N ++  +C    + 
Sbjct: 561 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 620

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              E+++ M + G +P   TYN LI GHC    +  A      M   G    V ++N LI
Sbjct: 621 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 680

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GF K+ K  EA  +F +M+   +  +   YN   +     G  E+   L +E +   + 
Sbjct: 681 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLV 740

Query: 401 VDILTYN 407
            DI T N
Sbjct: 741 GDIQTKN 747


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 151/498 (30%), Positives = 257/498 (51%), Gaps = 38/498 (7%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L ++S+ +TP    ++LL+ Q D  L+L+F  + + H+          I LHILTK + +
Sbjct: 38  LNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPHQ--FFNPHCKCIALHILTKFKLY 95

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+++++ + + ++   +  +  F  +  +Y MC+SS  VFDL+ K+ ++      A +  
Sbjct: 96  KTAQNLAQDLAENSVDEKGNYFFQCLKDTYFMCNSSSAVFDLVVKSCSYLNFIEKALNIV 155

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
              +  GF+P + S N  L S++   + V  A   Y+EM  + +S NV++ N+++  FC 
Sbjct: 156 DLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCA 215

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +E  +  F+ ME    +P+V TYNT+I  +C    +  A K    M   G++PN++T
Sbjct: 216 AGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLT 275

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N +I G C+ G++ E + + +EM     +P+ VTYNTL+NGY +VGN      L+ EML
Sbjct: 276 YNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEML 335

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           RNG+  D++TY +LI  +CK G   +A      +    L PN  TY++LI G   +   +
Sbjct: 336 RNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMD 395

Query: 456 RAFQLYKSMIRSGCRP---------NKHI--------------------------FEMLM 480
            A++++  MIRSG  P         N H                           +  ++
Sbjct: 396 EAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTII 455

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + FC+ ++ DRA ++  EM+EK ++PD+I  S L  GL    +   A  LF++M  + LL
Sbjct: 456 AGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLL 515

Query: 541 PKGFDKLRTINCAPENGE 558
           P  F     IN   + G+
Sbjct: 516 PDEFTYTSLINGYCKEGD 533



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 193/382 (50%), Gaps = 2/382 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG   + + ++  + F+ +      C  + + ++ +   Y   K+   A      M  
Sbjct: 209 LIRGFCAAGNLEMGLRFFEEM--ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGL 266

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  ++ L    R++   G   EM R   +P+  T N +++ +CK+G   +
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +   M   G  P V TY +LI+  C  G L+ AM+F + M   G++PN +T+ +LI 
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF +KG + EA RI+ EM  +   P +VTYN L+NG+   G  E    L   M   G+  
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ +I G C+  +  +A  +  ++ +  + P+A TYS+LI G C ++    A  L+
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+     P++  +  L++ +C+  D + A  +  EM++K   PD++  + L +GL+  
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566

Query: 522 GKDELAMKLFRKMEIRGLLPKG 543
            +   A +L  K+     +P G
Sbjct: 567 ARTREAKRLLLKLFYDESIPNG 588



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 174/342 (50%), Gaps = 15/342 (4%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L  T         A + F QM   G  P   +    ++       +D A   + EM R+ 
Sbjct: 349 LINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG 408

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P + T N +++  C  G +E A+ + + ME  G  P V +Y+T+I+G C    L  A 
Sbjct: 409 FPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAF 468

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M + G+ P+ IT+++LI G C++ +L+EA  +F EM   ++ P+  TY +LINGY
Sbjct: 469 QMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGY 528

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+     +L++EM++ G   D +TYN LI GL K+ +T++A  L+  L  +  +PN 
Sbjct: 529 CKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNG 588

Query: 439 STYS---------------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            TY                ALI G C++     A Q+++SMI+   +PN+ ++ +++   
Sbjct: 589 ITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGH 648

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           C++ +  +A ++  EM++    P ++ +  L   L+  G DE
Sbjct: 649 CRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDE 690



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 171/349 (48%), Gaps = 5/349 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++++        +    +    +M   GF P   + N  ++          AL  + E
Sbjct: 274 LTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSE 333

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M RN + P+V T   +++  CK G + RA+E F  M   G  P+  TY +LI+G   KG 
Sbjct: 334 MLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGF 393

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M ++G  P ++T+N L+ G C  G++ EA  +   M+   +SP+VV+Y+T
Sbjct: 394 MDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYST 453

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I G+ +    +    +  EM+  G+  D +TY++LI GLC++ +  +A  L +++   S
Sbjct: 454 IIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TY++LI G C   +   A  L+  MI+ G  P+   + +L++   +      A 
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
            +LL++      P+ I    L   +  C   E    + L +   ++GL+
Sbjct: 574 RLLLKLFYDESIPNGITYDTL---IESCSDIEFKSVVALIKGFCMKGLM 619



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 146/358 (40%), Gaps = 50/358 (13%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   ++ +     A   + +M   GF P I + N  L+    S R++ A+G  + M    
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +SP+V + + ++  FC+   ++RA ++   M   G  P   TY++LI G C +  L+ A 
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M    + P+  T+ +LI G+CK+G L+EA  +  EM      P+ VTYN LING 
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563

Query: 379 GQVGNSEMGASL-----YEEMLRNGIKVDIL----------------------------- 404
            +   +     L     Y+E + NGI  D L                             
Sbjct: 564 NKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEAD 623

Query: 405 ----------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
                            YN +I G C++G   KA  L K++     +P+  T  AL+   
Sbjct: 624 QVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL 683

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                 E+   + + ++RS    +  + + L+    +  + D    +L EM +    P
Sbjct: 684 YSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 15/292 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +   +   ++   A     +M + G  P   + +  +  L +  R++ A   ++EM 
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ +T   +++ +CK G +  A+ +   M   GF+P   TYN LI+G   +    
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIF---------------GFCKKGKLHEANRIFSEMK 360
            A +    +  +   PN IT++TLI                GFC KG ++EA+++F  M 
Sbjct: 571 EAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMI 630

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
             N  PN   YN +I+G+ + GN      LY+EM+  G     +T  AL+  L  EG  +
Sbjct: 631 KRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDE 690

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +   +++D+ ++  + +A    AL+       N +  F L   M + G  P+
Sbjct: 691 QLNLVIRDILRSCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPS 742


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 148/493 (30%), Positives = 251/493 (50%), Gaps = 20/493 (4%)

Query: 62  NPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTA------LSTHLTPFRVKH---V 112
           N  P P  +  +P   D DFV     H I +  K+  A      L    + FR  H   V
Sbjct: 45  NARPFPDYSPRKPSVTDTDFV-----HHISTTIKQRRAEPFRRILKPFESKFRPDHLIWV 99

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           L+ ++ DY L L+FF W +  +  SL  E+  IV+ I   ++  + +  ++    +    
Sbjct: 100 LMSIRDDYKLVLDFFDWARLRRDPSL--ESLCIVVQIAVASKDLRMAHRLVFEFWEKPHL 157

Query: 173 DLPS---KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D+ +   +  + ++Y+Y+   + PLVFD+ F+          A   F ++ +YG L  ++
Sbjct: 158 DVGNSFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVD 217

Query: 230 SCNKFLSSLLDS-ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           SCN FL+ L +S + +  A   ++E     +  N  + N+++H  C+LG ++ A  +   
Sbjct: 218 SCNLFLARLSNSFDGIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQ 277

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ME  G +P V +Y+ ++ G+C    L   +K    +++ G++PN  T+N++I   CK G+
Sbjct: 278 MEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGR 337

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA ++   MK   + P+ V Y TLI+G+G+ GN  +   L++EM R  I  D +TY +
Sbjct: 338 VVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTS 397

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I GLC+ GK  +A  L  ++    L P+  TY+ALI G C     + AF L+  M+  G
Sbjct: 398 MIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKG 457

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             PN   +  L+   C+  + D A E+L EM EK + P+    + L +GL   G  E A+
Sbjct: 458 LTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAV 517

Query: 529 KLFRKMEIRGLLP 541
           KL  +M++ G  P
Sbjct: 518 KLMEEMDLAGFFP 530



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 188/363 (51%), Gaps = 2/363 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        K + A     QM   G +P + S +  +      E++   L   +E++
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ 314

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + PN YT N ++   CK G +  A +V + M++    P    Y TLISG    G +S
Sbjct: 315 RKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS 374

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +  K  + M++  I P+ +T+ ++I G C+ GK+ EA ++FSEM +  + P+ VTY  LI
Sbjct: 375 VEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALI 434

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY + G  +   SL+ +M+  G+  +++TY AL+ GLCK G+   A  L+ ++ +  L 
Sbjct: 435 DGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQ 494

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ALI G C   N E+A +L + M  +G  P+   +  +M  +C+  +  +A E+
Sbjct: 495 PNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHEL 554

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCA 553
           L  ML+K + P  +  + L +G    G  E   +L + M  +G++P    F+ L    C 
Sbjct: 555 LRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCI 614

Query: 554 PEN 556
             N
Sbjct: 615 RNN 617



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 165/362 (45%), Gaps = 37/362 (10%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S    S  V +    + EM+R +I P+  T   ++H  C+ G +  A ++F  M S G
Sbjct: 363 LISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG 422

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY  LI G+C  G +  A    N M + G+ PNV+T+  L+ G CK G++  AN
Sbjct: 423 LKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIAN 482

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE-------------------- 393
            +  EM    + PNV TYN LING  +VGN E    L EE                    
Sbjct: 483 ELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAY 542

Query: 394 ---------------MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                          ML  G++  I+T+N L+ G C  G  +    L+K +    ++PNA
Sbjct: 543 CKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNA 602

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +T+++L+   C+R N     ++YK M   G  P+ + + +L+   C+  +   A  +  E
Sbjct: 603 TTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKE 662

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCAPEN 556
           M+EK  +  +   + L  G +   K E A KLF +M   G + +   +D    +N    N
Sbjct: 663 MVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGN 722

Query: 557 GE 558
            E
Sbjct: 723 WE 724



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 168/350 (48%), Gaps = 2/350 (0%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  S++ G+  +       KLF  +L      D   + +  L   Y    + + A   
Sbjct: 392 FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE--VTYTALIDGYCKAGEMKEAFSL 449

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             QM + G  P + +    +  L     VDIA     EM    + PNV T N +++  CK
Sbjct: 450 HNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCK 509

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           +G IE+AV++ + M+  GF P   TY T++  +C  G ++ A +   +M   G+QP ++T
Sbjct: 510 VGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           FN L+ GFC  G L +  R+   M    + PN  T+N+L+  Y    N      +Y+ M 
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+  D  TYN LI G CK    K+A +L K++ +      A++Y++LI G   RK  E
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            A +L++ M   G    K I+++ +    +  +++   E+  E +EKC+ 
Sbjct: 690 EARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLV 739


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/451 (32%), Positives = 243/451 (53%), Gaps = 10/451 (2%)

Query: 96  KLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
           +L  LS + TP    ++LLK Q +  L L+F TW   H+    TL    I LHILT+ + 
Sbjct: 38  QLHHLSANFTPEAASNLLLKSQNNQELILKFLTWANPHQ--FFTLRCKCITLHILTRFKL 95

Query: 156 FKSSESILRGI----LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           +K+++++   +    LD +   L   +F S+  +Y +C+S+  VFDL+ K+Y+       
Sbjct: 96  YKTAQTLAEDVAAKTLDDEDASL---VFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDK 152

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVM 270
           A       + +GF+P + S N  L + + S+R +  A   +KEM ++++SPNV+T N+++
Sbjct: 153 ALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILI 212

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             FC  G ++ A+  F  ME  G +P+V TYNTLI G+C    +    +    M   G++
Sbjct: 213 RGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLE 272

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+I++N +I G C++G++ E + + +EM     S + VTYNTLI GY + GN      +
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           + EMLR+G+   ++TY +LI  +CK G   +A   +  +    L PN  TY+ L+ G   
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           +     A+++ K MI +G  P+   +  L++  C       A  VL +M EK + PD + 
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            S + SG       + A+++ RKM  +G+ P
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 187/373 (50%), Gaps = 2/373 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG   + + D+  + FD +    + C  + + ++ L   Y   +K  +  +    M  
Sbjct: 211 LIRGFCLAGNLDVALRFFDRM--EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMAL 268

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + S N  ++ L    R+        EM +   S +  T N ++  +CK G   +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQ 328

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +   M   G  PSV TY +LI   C  G ++ A +F + M   G+ PN  T+ TL+ 
Sbjct: 329 ALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVD 388

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF +KG ++EA R+  EM     SP+VVTYN LING+   G      ++ E+M   G+  
Sbjct: 389 GFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTP 448

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ ++ G C+     +A  + + +    + P+  TYS+LI G C ++ ++ A  L+
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLF 508

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R G  P++  +  L++ +C   D  +A ++  EM+EK + PD +  S L +GL+  
Sbjct: 509 DEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568

Query: 522 GKDELAMKLFRKM 534
            +   A +L  K+
Sbjct: 569 ARTREAKRLLLKL 581



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 171/364 (46%), Gaps = 19/364 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L K Y     F  A     +M  +G  P + +    + S+  +  ++ A  F  +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQ 370

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + PN  T   ++  F + G +  A  V K M   GF PSV TYN LI+GHC  G 
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGK 430

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+     M++ G+ P+V++++T++ GFC+   + EA R+  +M A  + P+ +TY++
Sbjct: 431 MVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSS 490

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ +   ++    L++EMLR G+  D  TY ALI   C EG  +KA  L  ++ +  
Sbjct: 491 LIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKG 550

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST----------- 482
           ++P+  TYS LI G   +  +  A +L   +      P+   +  L+             
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610

Query: 483 ----FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEI 536
               FC       A +V   MLEK   PD    + +  G  HC  G    A  L+++M  
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHG--HCRGGDIRKAYSLYKEMVK 668

Query: 537 RGLL 540
            G L
Sbjct: 669 SGFL 672



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 162/327 (49%), Gaps = 15/327 (4%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           AT+   QMR  G  P   +    +        ++ A    KEM  N  SP+V T N +++
Sbjct: 364 ATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALIN 423

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G +  A+ V ++M+  G  P V +Y+T++SG C    +  A++ K  M   GI+P
Sbjct: 424 GHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKP 483

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + IT+++LI GFC++ +  EA  +F EM    + P+  TY  LIN Y   G+ +    L+
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLH 543

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS--------- 442
            EM+  G+  D++TY+ LI GL K+ +T++A  L+  L     VP+  TY          
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603

Query: 443 ------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
                 +LI G C++     A Q+++SM+    +P+   + +++   C+  D  +A  + 
Sbjct: 604 EFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLY 663

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGK 523
            EM++      ++ +  L   LH  GK
Sbjct: 664 KEMVKSGFLLHTVTVIALVKTLHKEGK 690



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 140/331 (42%), Gaps = 50/331 (15%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   +    K  +A      M++ G  P + S +  LS    S  VD AL   
Sbjct: 414 SVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVK 473

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           ++M    I P+  T + ++  FC+    + A ++F  M  +G  P   TY  LI+ +C +
Sbjct: 474 RKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCME 533

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFN---------------------------------- 337
           G L  A++  N M + G+ P+V+T++                                  
Sbjct: 534 GDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTY 593

Query: 338 ----------------TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
                           +LI GFC KG + EA+++F  M   N  P+   YN +I+G+ + 
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRG 653

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+     SLY+EM+++G  +  +T  AL+  L KEGK  +   ++ ++ ++  +  A   
Sbjct: 654 GDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQA 713

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             L+       N +    +   M + G  PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 145/454 (31%), Positives = 233/454 (51%), Gaps = 4/454 (0%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           L+H++   + AL  HL    +  VLL+ Q D   +L FF WV+       + + + IV+H
Sbjct: 86  LLHTE---VNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVH 142

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
            L  +R F  +   L  +++    DLPS+ +F +++     C+  P+VFD+L K Y    
Sbjct: 143 TLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMG 202

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R    +F +M   GF+P + + N  L+ LL     D     Y+EM R  I+PN+YT N
Sbjct: 203 RVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFN 262

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++ H  CK G   +  +  + ME  GF P + TYNTLI+ +C KG L  A     +M + 
Sbjct: 263 ILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRR 322

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ P+++++  L+ G CK+G++ EA+++F  M    +SP++VTYNTLI+GY + G  +  
Sbjct: 323 GVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQES 382

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            SL  +M+ NGI  D  T   L+ G  KEGK   A  LV +L +  +  +   YS LI  
Sbjct: 383 RSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVA 442

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C       A  L + M + G +P   I+  L+ +FCQ +    A  + +EM++K + P+
Sbjct: 443 LCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 502

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 +   L    +      L  +M   G+LP
Sbjct: 503 LATYRAVIGCLSRLSRSMEGESLVGEMVASGMLP 536



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 136/278 (48%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             +M++ A+ ++G +   +  F+ M  +GF+P+V T N L++G           +    M
Sbjct: 190 VFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEM 249

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           E+ GI PN+ TFN L    CK G   + N+   +M+     P++VTYNTLIN Y + G  
Sbjct: 250 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRL 309

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    LY+ M R G+  D+++Y AL+ GLCKEG+ ++A  L   +    L P+  TY+ L
Sbjct: 310 DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTL 369

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C     + +  L   MI +G  P+     +L+  + +   F  A  +++E+    +
Sbjct: 370 IHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGV 429

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +    I S L   L    +   A  L  +M   G  P+
Sbjct: 430 SISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPE 467



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 5/228 (2%)

Query: 320 FKNLM---EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           FKNL+   E     P  + F+ L+  + + G++ E  R F  M      P V+T N L+N
Sbjct: 174 FKNLILCTEDCNWDP--VVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLN 231

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  ++  ++    +YEEM R GI  ++ T+N L   LCK+G T K    ++ +++    P
Sbjct: 232 GLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDP 291

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY+ LI   C +   + AF LYK M R G  P+   +  LM+  C+      A ++ 
Sbjct: 292 DIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLF 351

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             M+ + ++PD +  + L  G    GK + +  L   M   G+ P  F
Sbjct: 352 HRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 399



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 35/318 (11%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + ++ L  +Y  + +  +A   +  M   G +P + S    ++ L    RV  A  
Sbjct: 290 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 349

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    +SP++ T N ++H +CK G ++ +  +  +M   G  P   T   L+ G+ 
Sbjct: 350 LFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 409

Query: 310 NKG----LLSLAMKF----------------------------KNLME---KNGIQPNVI 334
            +G     L+L ++                             KNL+E   K+G +P + 
Sbjct: 410 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELE 469

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI  FC+   + EA  +  EM    + PN+ TY  +I    ++  S  G SL  EM
Sbjct: 470 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEM 529

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +G+  D+    AL  G C+E    KA  L+    K   + +  +++ALI     + + 
Sbjct: 530 VASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDI 589

Query: 455 ERAFQLYKSMIRSGCRPN 472
            R+ ++   M++ G  PN
Sbjct: 590 ARSLEIQDMMLKMGLLPN 607



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 109/302 (36%), Gaps = 40/302 (13%)

Query: 179 FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
            D   Y Y++     +V DL     L        + R A   F +M   G  P I + N 
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYT-----------------LNMVMH----- 271
            +       ++  +     +M  N ISP+ +T                 LN+V+      
Sbjct: 369 LIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFG 428

Query: 272 -------------AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
                        A C+      A  + + M   G  P +  YN LI   C    ++ A+
Sbjct: 429 VSISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEAL 488

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
             K  M    I+PN+ T+  +I    +  +  E   +  EM A+ + P++     L  GY
Sbjct: 489 LLKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASGMLPDLEICRALFYGY 548

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  + +   SL     +     D  ++NALI     +G   ++  +   + K  L+PN 
Sbjct: 549 CRENDIDKAESLLSFFAKEFQIHDTESFNALIRITSAKGDIARSLEIQDMMLKMGLLPNP 608

Query: 439 ST 440
            T
Sbjct: 609 LT 610



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 59/155 (38%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P +E  N+ + S    + +  AL    EM    I PN+ T   V+    +L 
Sbjct: 458 RMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLS 517

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
                  +   M + G +P +     L  G+C +  +  A    +   K     +  +FN
Sbjct: 518 RSMEGESLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQIHDTESFN 577

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            LI     KG +  +  I   M    + PN +T N
Sbjct: 578 ALIRITSAKGDIARSLEIQDMMLKMGLLPNPLTCN 612


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
           thaliana]
          Length = 1184

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 256/489 (52%), Gaps = 22/489 (4%)

Query: 65  PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-------HVLLKVQ 117
           P P  +  +   +D +FV+   +++I    ++   L   L P+  K        VL+K++
Sbjct: 485 PFPDYSPKKASVRDTEFVH-QITNVIKL--RRAEPLRRSLKPYECKFKTDHLIWVLMKIK 541

Query: 118 KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD------SDS 171
            DY L L+FF W ++ + S+L  E+  IV+H+   ++  K ++S++    +      +DS
Sbjct: 542 CDYRLVLDFFDWARSRRDSNL--ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS 599

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F    + FD ++Y+Y+   S P VFD+ F+        R A   F +M +YG +  ++SC
Sbjct: 600 F---VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 656

Query: 232 NKFLSSL-LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N +L+ L  D  +   A+  ++E     +  NV + N+V+H  C+LG I+ A  +   ME
Sbjct: 657 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 716

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G+ P V +Y+T+++G+C  G L    K   +M++ G++PN   + ++I   C+  KL 
Sbjct: 717 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 776

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA   FSEM    + P+ V Y TLI+G+ + G+    +  + EM    I  D+LTY A+I
Sbjct: 777 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 836

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G C+ G   +A  L  ++    L P++ T++ LI G C   + + AF+++  MI++GC 
Sbjct: 837 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 896

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   +  L+   C+  D D A E+L EM +  + P+    + + +GL   G  E A+KL
Sbjct: 897 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956

Query: 531 FRKMEIRGL 539
             + E  GL
Sbjct: 957 VGEFEAAGL 965



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 5/337 (1%)

Query: 208  KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
            K   A + F +M   G LP        +        +  A  F+ EM    I+P+V T  
Sbjct: 774  KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833

Query: 268  MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             ++  FC++G +  A ++F  M   G  P   T+  LI+G+C  G +  A +  N M + 
Sbjct: 834  AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893

Query: 328  GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            G  PNV+T+ TLI G CK+G L  AN +  EM    + PN+ TYN+++NG  + GN E  
Sbjct: 894  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953

Query: 388  ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
              L  E    G+  D +TY  L+   CK G+  KA  ++K++    L P   T++ L+ G
Sbjct: 954  VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 1013

Query: 448  QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
             C+    E   +L   M+  G  PN   F  L+  +C   +   A  +  +M  + + PD
Sbjct: 1014 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 1073

Query: 508  SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                  L  G  HC    +    F   E++G   KGF
Sbjct: 1074 GKTYENLVKG--HCKARNMKEAWFLFQEMKG---KGF 1105



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 167/346 (48%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            +V+  L   +  R   R A+  F +M      P + +    +S       +  A   + E
Sbjct: 795  VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 854

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M    + P+  T   +++ +CK G ++ A  V  +M   G  P+V TY TLI G C +G 
Sbjct: 855  MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 914

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A +  + M K G+QPN+ T+N+++ G CK G + EA ++  E +A  ++ + VTY T
Sbjct: 915  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 974

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L++ Y + G  +    + +EML  G++  I+T+N L+ G C  G  +    L+  +    
Sbjct: 975  LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1034

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            + PNA+T+++L+   C+R N + A  +YK M   G  P+   +E L+   C+  +   A 
Sbjct: 1035 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 1094

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             +  EM  K  +      S L  G     K   A ++F +M   GL
Sbjct: 1095 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 1140



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 148/316 (46%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + F  L   Y      ++A      M   G  P + +    +  L     +D A     E
Sbjct: 865  VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 924

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M +  + PN++T N +++  CK G IE AV++    E+ G      TY TL+  +C  G 
Sbjct: 925  MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 984

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A +    M   G+QP ++TFN L+ GFC  G L +  ++ + M A  ++PN  T+N+
Sbjct: 985  MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 1044

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L+  Y    N +   ++Y++M   G+  D  TY  L+ G CK    K+A +L +++    
Sbjct: 1045 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
               + STYS LI G   RK    A +++  M R G   +K IF+    T  + +  D   
Sbjct: 1105 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 1164

Query: 494  EVLLEMLEKCMAPDSI 509
            + + E++E  +  + +
Sbjct: 1165 DPIDEIIENYLVDEQL 1180



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            A   +  M +   SPNV T   ++   CK G ++ A E+   M  +G  P++ TYN++++
Sbjct: 883  AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 942

Query: 307  GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            G C  G +  A+K     E  G+  + +T+ TL+  +CK G++ +A  I  EM    + P
Sbjct: 943  GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 1002

Query: 367  NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
             +VT+N L+NG+   G  E G  L   ML  GI  +  T+N+L+   C     K A  + 
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062

Query: 427  KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            KD+    + P+  TY  L+ G C  +N + A+ L++ M   G   +   + +L+  F + 
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122

Query: 487  EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
            + F  A EV  +M  + +A D  I  + +S   + GK
Sbjct: 1123 KKFLEAREVFDQMRREGLAADKEIF-DFFSDTKYKGK 1158


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 256/489 (52%), Gaps = 22/489 (4%)

Query: 65  PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-------HVLLKVQ 117
           P P  +  +   +D +FV+   +++I    ++   L   L P+  K        VL+K++
Sbjct: 42  PFPDYSPKKASVRDTEFVH-QITNVIK--LRRAEPLRRSLKPYECKFKTDHLIWVLMKIK 98

Query: 118 KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD------SDS 171
            DY L L+FF W ++ + S+L  E+  IV+H+   ++  K ++S++    +      +DS
Sbjct: 99  CDYRLVLDFFDWARSRRDSNL--ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS 156

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F    + FD ++Y+Y+   S P VFD+ F+        R A   F +M +YG +  ++SC
Sbjct: 157 F---VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213

Query: 232 NKFLSSL-LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N +L+ L  D  +   A+  ++E     +  NV + N+V+H  C+LG I+ A  +   ME
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G+ P V +Y+T+++G+C  G L    K   +M++ G++PN   + ++I   C+  KL 
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA   FSEM    + P+ V Y TLI+G+ + G+    +  + EM    I  D+LTY A+I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G C+ G   +A  L  ++    L P++ T++ LI G C   + + AF+++  MI++GC 
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   +  L+   C+  D D A E+L EM +  + P+    + + +GL   G  E A+KL
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513

Query: 531 FRKMEIRGL 539
             + E  GL
Sbjct: 514 VGEFEAAGL 522



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 5/337 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A + F +M   G LP        +        +  A  F+ EM    I+P+V T  
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  FC++G +  A ++F  M   G  P   T+  LI+G+C  G +  A +  N M + 
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G  PNV+T+ TLI G CK+G L  AN +  EM    + PN+ TYN+++NG  + GN E  
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L  E    G+  D +TY  L+   CK G+  KA  ++K++    L P   T++ L+ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C+    E   +L   M+  G  PN   F  L+  +C   +   A  +  +M  + + PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                 L  G  HC    +    F   E++G   KGF
Sbjct: 631 GKTYENLVKG--HCKARNMKEAWFLFQEMKG---KGF 662



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 167/346 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+  L   +  R   R A+  F +M      P + +    +S       +  A   + E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+  T   +++ +CK G ++ A  V  +M   G  P+V TY TLI G C +G 
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +  + M K G+QPN+ T+N+++ G CK G + EA ++  E +A  ++ + VTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++ Y + G  +    + +EML  G++  I+T+N L+ G C  G  +    L+  +    
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PNA+T+++L+   C+R N + A  +YK M   G  P+   +E L+   C+  +   A 
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  EM  K  +      S L  G     K   A ++F +M   GL
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 148/316 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   Y      ++A      M   G  P + +    +  L     +D A     E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + PN++T N +++  CK G IE AV++    E+ G      TY TL+  +C  G 
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M   G+QP ++TFN L+ GFC  G L +  ++ + M A  ++PN  T+N+
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+  Y    N +   ++Y++M   G+  D  TY  L+ G CK    K+A +L +++    
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              + STYS LI G   RK    A +++  M R G   +K IF+    T  + +  D   
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721

Query: 494 EVLLEMLEKCMAPDSI 509
           + + E++E  +  + +
Sbjct: 722 DPIDEIIENYLVDEQL 737



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 1/277 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +  M +   SPNV T   ++   CK G ++ A E+   M  +G  P++ TYN++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G +  A+K     E  G+  + +T+ TL+  +CK G++ +A  I  EM    + P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +VT+N L+NG+   G  E G  L   ML  GI  +  T+N+L+   C     K A  + 
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           KD+    + P+  TY  L+ G C  +N + A+ L++ M   G   +   + +L+  F + 
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           + F  A EV  +M  + +A D  I  + +S   + GK
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF-DFFSDTKYKGK 715


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 216/418 (51%), Gaps = 1/418 (0%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L FF W+ T     L++ ++  + H L  ++    ++S+L+ ++     +  S +F S+L
Sbjct: 87  LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            + R    S LVF +L   Y     F +A   F  +R +       SC      L+    
Sbjct: 147 EA-RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A  FY+E+      P+V   N++MH  CK   I  A  +F  +   G  P+V ++NT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G+C  G L    + K  M +N + P+V T++ LI G CK+G+L +AN++F EM    
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLING+   G +++G  +Y++MLR G+K D++TYN LI GLCK G  ++A 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            LV ++ +  L P+  TY+ LI G C   + E A ++ K M++ G   +   F  L+S F
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGF 445

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+      A   L EMLE  + PD    + +  G    G  +   KL ++M+  G +P
Sbjct: 446 CREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 174/335 (51%), Gaps = 4/335 (1%)

Query: 189 CDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           C   P V  F++L        K   A   F ++   G  P + S N  ++    S  +D 
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                + M  NR+ P+V+T +++++  CK G ++ A ++F  M   G +P+  T+ TLI+
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           GHC  G   L M+    M + G++P+VIT+NTLI G CK G L EA ++  EM    + P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TY  LI+G  + G+ E    + +EM++ GI++D + + ALI G C+EG+  +A   +
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ +  + P+ +TY+ +I G C + + +  F+L K M   G  P    + +L++  C+ 
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
                A  +L  ML   + PD I  + L  G  HC
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLEG--HC 551



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 135/262 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             + +L        +  +A   F +M D G +P   +    ++    + R D+ +  Y++
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + P+V T N +++  CK+G +  A ++   M   G  P   TY  LI G C +G 
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGD 415

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++ +  M K GI+ + + F  LI GFC++G++ EA R   EM    + P+  TY  
Sbjct: 416 LESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTM 475

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G+ + G+ + G  L +EM  +G    ++TYN L+ GLCK+G+ K A  L+  +    
Sbjct: 476 VIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535

Query: 434 LVPNASTYSALITGQCVRKNSE 455
           +VP+  TY+ L+ G C   N E
Sbjct: 536 VVPDDITYNILLEGHCKHGNRE 557



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 60/107 (56%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +EM    I P+  T  MV+H FCK G ++   ++ K M+  G +P V TYN L++G C +
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           G +  A    + M   G+ P+ IT+N L+ G CK G   + +++ SE
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG  S +  F +++E  G   + + F+ L+  +   G   +A + F  ++  N+     +
Sbjct: 133 KGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS 192

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
              L +   ++  +    + YEE+L  G   D+  +N L+  LCKE K  +A  L  ++ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K                                    G RP    F  L++ +C++ + D
Sbjct: 253 KR-----------------------------------GLRPTVVSFNTLINGYCKSGNLD 277

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
           +   +   M+E  + PD    S L +GL   G+ + A KLF +M  RGL+P        I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 551 NCAPENGEKESG 562
           N     G  + G
Sbjct: 338 NGHCVTGRADLG 349


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 216/418 (51%), Gaps = 1/418 (0%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L FF W+ T     L++ ++  + H L  ++    ++S+L+ ++     +  S +F S+L
Sbjct: 87  LSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVL 146

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            + R    S LVF +L   Y     F +A   F  +R +       SC      L+    
Sbjct: 147 EA-RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A  FY+E+      P+V   N++MH  CK   I  A  +F  +   G  P+V ++NT
Sbjct: 206 TSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNT 265

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G+C  G L    + K  M +N + P+V T++ LI G CK+G+L +AN++F EM    
Sbjct: 266 LINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRG 325

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLING+   G +++G  +Y++MLR G+K D++TYN LI GLCK G  ++A 
Sbjct: 326 LVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAK 385

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            LV ++ +  L P+  TY+ LI G C   + E A ++ K M++ G   +   F  L+S F
Sbjct: 386 KLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGF 445

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+      A   L EMLE  + PD    + +  G    G  +   KL ++M+  G +P
Sbjct: 446 CREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVP 503



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 169/323 (52%), Gaps = 2/323 (0%)

Query: 189 CDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           C   P V  F++L        K   A   F ++   G  P + S N  ++    S  +D 
Sbjct: 219 CGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQ 278

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                + M  NR+ P+V+T +++++  CK G ++ A ++F  M   G +P+  T+ TLI+
Sbjct: 279 GFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLIN 338

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           GHC  G   L M+    M + G++P+VIT+NTLI G CK G L EA ++  EM    + P
Sbjct: 339 GHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TY  LI+G  + G+ E    + +EM++ GI++D + + ALI G C+EG+  +A   +
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ +  + P+ +TY+ +I G C + + +  F+L K M   G  P    + +L++  C+ 
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518

Query: 487 EDFDRAAEVLLEMLEKCMAPDSI 509
                A  +L  ML   + PD I
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDI 541



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 136/268 (50%), Gaps = 9/268 (3%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        +  +A   F +M D G +P   +    ++    + R D+ +  Y++M 
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + P+V T N +++  CK+G +  A ++   M   G  P   TY  LI G C +G L 
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++ +  M K GI+ + + F  LI GFC++G++ EA R   EM    + P+  TY  +I
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ + G+ + G  L +EM  +G    ++TYN L+ GLCK+G+ K A  L+  +    +V
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKS 463
           P+  TY+ L+         ER  Q +K 
Sbjct: 538 PDDITYNILL---------ERTLQAWKQ 556



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 35/252 (13%)

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG  S +  F +++E  G   + + F+ L+  +   G   +A + F  ++  N+     +
Sbjct: 133 KGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHS 192

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
              L +   ++  +    + YEE+L  G   D+  +N L+  LCKE K  +A  L  ++ 
Sbjct: 193 CGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIG 252

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K                                    G RP    F  L++ +C++ + D
Sbjct: 253 KR-----------------------------------GLRPTVVSFNTLINGYCKSGNLD 277

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
           +   +   M+E  + PD    S L +GL   G+ + A KLF +M  RGL+P        I
Sbjct: 278 QGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLI 337

Query: 551 NCAPENGEKESG 562
           N     G  + G
Sbjct: 338 NGHCVTGRADLG 349


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/536 (29%), Positives = 265/536 (49%), Gaps = 45/536 (8%)

Query: 48  VNPSVSENSMKMNRNPIPIP---HRTLPEPKGQDLDFVNIAYSHLIHS----DWKKLTAL 100
           + PS+  +    +  PIPI    H     P       + I +  L+ S     W  +  L
Sbjct: 17  LKPSILISYAHFSSTPIPIIDHLHAETLHPNASTDSPLVITHQSLLDSIQSSQWHLIKHL 76

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           + +L+P  +   LL + K   L+L+F T +       L ++T  + + +++++   KS+ 
Sbjct: 77  APNLSPSLISATLLSLHKKSDLALQFVTHIGF---KGLDIKTKCLAVAVVSRSPSPKSTL 133

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +L+  ++S    +     +  +   R+   S +VFD+L +     K+  +A + F  M+
Sbjct: 134 HLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMK 193

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P IE+ N  LS  L   + +     Y EM R +I   VYT N++++  CK G ++
Sbjct: 194 EKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLK 253

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A +   +ME++G  P+V TYNT+I G+C++G +  A    ++M+  G++P+  T+ +LI
Sbjct: 254 KAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLI 313

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK GKL EA+ I  +MK   + P  VTYNTLI+GY   G+        +EM+R  I 
Sbjct: 314 SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL 373

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             + TYN LI  L  EGK  +A  ++KD+  + +VP++ TY+ LI G C   N+++AF L
Sbjct: 374 PTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNL 433

Query: 461 YKSM-----------------------------------IRSGCRPNKHIFEMLMSTFCQ 485
           +  M                                   IR G  P+  +F  L+   C 
Sbjct: 434 HDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCA 493

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           N + DRA  +L EM ++ + PD +  + L  G    GK E A +L ++M+ RG+ P
Sbjct: 494 NGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRP 549



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 187/386 (48%), Gaps = 35/386 (9%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+   F+++        K + A D    M + G  P + + N  +       RV+ A   
Sbjct: 234 STVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMV 293

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+   + P+ YT   ++   CK G +E A  + + M+ +G +P+  TYNTLI G+CN
Sbjct: 294 LDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCN 353

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L  A  +++ M +  I P V T+N LI     +GK+ EA+ +  +M  + + P+ +T
Sbjct: 354 KGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSIT 413

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY------------------------ 406
           YN LINGY + GN++   +L++EM+  GI+  ++TY                        
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473

Query: 407 -----------NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
                      NALI G C  G   +A  L+K++DK ++VP+  TY+ L+ G+C     E
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A +L K M R G RP+   +  L+S + +  D + A  +  EML     P  +  + L 
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL    + +LA +L ++M  +G+ P
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITP 619



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 162/311 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A+    +M++ G LP   + N  +    +   +  A G+  EM R  I P V T N
Sbjct: 321 KLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYN 380

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++HA    G ++ A  + K+M   G +P   TYN LI+G+C  G    A    + M   
Sbjct: 381 LLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK 440

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GIQP ++T+ +LI+   K+ ++  A+ +F ++     SP+++ +N LI+G+   GN +  
Sbjct: 441 GIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRA 500

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +L +EM +  I  D +TYN L+ G C+EGK ++A  L+K++ +  + P+  +Y+ LI+G
Sbjct: 501 FALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISG 560

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
              R +   AF +   M+  G  P    +  L+   C+N+  D A E+L EM+ K + PD
Sbjct: 561 YSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPD 620

Query: 508 SIILSELYSGL 518
                 L  G+
Sbjct: 621 DSTYFSLIEGI 631


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1164

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 262/529 (49%), Gaps = 23/529 (4%)

Query: 32  RRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIP--------IPHRTLPEPKGQDLDFVN 83
           +R+ + V    +    V+  + ++ +  NR P P           R  P+   +     +
Sbjct: 419 KRIVSFVKMTVRKYDVVSTKIPKSIVVFNRTPCPSFSDFSTLTDTRPFPDYSPKKASVRD 478

Query: 84  IAYSHLIHS--DWKKLTALSTHLTPFRVK-------HVLLKVQKDYVLSLEFFTWVQTHK 134
             + H I +    ++   L   L P+  K        VL+K++ DY L L+FF W ++ +
Sbjct: 479 TEFVHQITNVIKLRRAEPLRRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRR 538

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS---KLFDSILYSYRMCDS 191
            S+L  E+  IV+H+   ++  K ++S++    +    ++     + FD ++Y+Y+   S
Sbjct: 539 DSNL--ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTESFVQFFDLLVYTYKDWGS 596

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL-DSERVDIALGF 250
            P VFD+ F+          A   F +M +YG +  ++SCN +L+ L  D  +   A+  
Sbjct: 597 DPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIV 656

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++E     +  NV + N+V+H  C+LG I  A  +   ME  G+ P V +Y+T+I+G+C 
Sbjct: 657 FREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCR 716

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L    K    M++ G++PN  T+ ++I   C+  KL EA   FSEM    + P+ + 
Sbjct: 717 FGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIV 776

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TL++G+ + G+    +  + EM    I  D+LTY A+I G C+ G   +A  L  ++ 
Sbjct: 777 YTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEML 836

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L P+  T++ L+ G C   + + AF+++  MI++GC PN   +  L+   C+  D D
Sbjct: 837 CRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 896

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            A E+L EM +  + P+    + + +GL   G  E A+KL  + E  GL
Sbjct: 897 SANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 165/346 (47%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            +V+  L   +  R   R A+  F +M      P + +    +S       +  A   + E
Sbjct: 775  IVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M    + P++ T   +M+ +CK G I+ A  V  +M   G  P+V TY TLI G C +G 
Sbjct: 835  MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A +  + M K G+QPN+ T+N+++ G CK G + EA ++  E +A  ++ + VTY T
Sbjct: 895  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L++ Y + G  +    +  EML  G++  I+T+N L+ G C  G  +    L+  +    
Sbjct: 955  LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            + PNA+T++ L+   C+R N + A  +YK M   G  P+   +E L+   C   +   A 
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             +  EM  K  +      S L  G     K   A ++F +M   GL
Sbjct: 1075 FLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGL 1120



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 158/349 (45%), Gaps = 2/349 (0%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +I+ G           KLF  +L   R  +   + F  L   Y      ++A      M 
Sbjct: 814  AIISGFCQIGDMVEAGKLFHEMLC--RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMI 871

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
              G  P + +    +  L     +D A     EM +  + PN++T N +++  CK G IE
Sbjct: 872  QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 931

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             AV++    E+ G      TY TL+  +C  G +  A +    M   G+QP ++TFN L+
Sbjct: 932  EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLM 991

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             GFC  G L +  ++ + M A  ++PN  T+N L+  Y    N +   ++Y++M   G++
Sbjct: 992  NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE 1051

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             D  TY  L+ G C     K+A +L +++       + STYS LI G   RK    A ++
Sbjct: 1052 PDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREI 1111

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +  M R G   +K IF+    T  + +  D   + + E++E  +  + +
Sbjct: 1112 FDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIENYLVDEQL 1160



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 165/365 (45%), Gaps = 7/365 (1%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQ 218
            +++ G          SK F    Y     D +P  L +  +   +        A   F +
Sbjct: 779  TLVDGFCKRGDIRAASKFF----YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 834

Query: 219  MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
            M   G  P I +  + ++    +  +  A   +  M +   SPNV T   ++   CK G 
Sbjct: 835  MLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 894

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            ++ A E+   M  +G  P++ TYN++++G C  G +  A+K     E  G+  + +T+ T
Sbjct: 895  LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 954

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            L+  +CK G++ +A  I +EM    + P +VT+N L+NG+   G  E G  L   ML  G
Sbjct: 955  LMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 1014

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            I  +  T+N L+   C     K A  + KD+    + P+  TY  L+ G C  +N + A+
Sbjct: 1015 IAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAW 1074

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             L++ M   G   +   + +L+  F + + F  A E+  +M    +A D  I  + +S  
Sbjct: 1075 FLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF-DFFSDT 1133

Query: 519  HHCGK 523
             + GK
Sbjct: 1134 KYKGK 1138


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 248/488 (50%), Gaps = 43/488 (8%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           S W  +  + + LTP  +   LL + +   + L+F      HK S     T  + + I+ 
Sbjct: 52  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFH-HKLSDA--RTLCLAIVIVA 108

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFR 210
           +    K +  +LR  L   + +   ++F+ +  S  R+   S +VFD L K+     +  
Sbjct: 109 RLPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 168

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + F  M++ G LP IE+CN  LS  L   R + A   Y EM R RI  +VYT N+++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  CK G +++A +   +ME+ G  P++ TYNT++ G+C+ G +  A      M++  I+
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+  T+ +LI G CK+G+L EA++IF EM    + P+ V YNTLI+G+   GN +M ++ 
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EML+ GI   + TYN+LI  L  E +T +A  ++K++ +  + P+A TY+ LI G C 
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 451 RKNSERAFQLYKSMIRSGCRPNKH-----------------------------------I 475
             N+++AF L+  M+ SG +P K                                    +
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIM 468

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRK 533
           F  L+   C N +   A E+L +M    + PD +  + +  G  HC  GK E A +LF +
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG--HCREGKVEEARELFDE 526

Query: 534 MEIRGLLP 541
           M+ RG+ P
Sbjct: 527 MKRRGIKP 534



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 178/351 (50%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS   F+++        K + A D    M   G  P I + N  +     S RV+ A   
Sbjct: 219 SSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAI 278

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+R +I P+ +T   ++   CK G +E A ++F+ M   G  PS   YNTLI G CN
Sbjct: 279 LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L +A  +K+ M K GI P + T+N+LI     + +  EA  +  E++   +SP+ +T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LINGY +  N++    L++EML +GIK    TY +L+  L K+ + K+A  L K + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              ++P+A  ++ALI G C   N + AF+L K M R    P++  F  +M   C+    +
Sbjct: 459 SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A E+  EM  + + PD I  + L SG    G  + A ++  +M   G  P
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 165/341 (48%), Gaps = 2/341 (0%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D+IL + +     P    +  L      + +   A+  F +M   G  P     N  +  
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
             +   +D+A  +  EM +  ISP + T N ++HA       + A  + K ++  G  P 
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYN LI+G+C       A    + M  +GI+P   T+ +L+    KK ++ EA+ +F 
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           ++ +  V P+ + +N LI+G+    N +    L ++M R  +  D +T+N ++ G C+EG
Sbjct: 456 KITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K ++A  L  ++ +  + P+  +++ LI+G   R + + AF++   M+ +G  P    + 
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+   C+N++ D A E+L EM+ K M PD      L  G+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 113/222 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y      + A     +M   G  P  ++    L  L    R+  A   +K+
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    + P+    N ++   C    ++ A E+ K+M+ M   P   T+NT++ GHC +G 
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M++ GI+P+ I+FNTLI G+ ++G + +A R+ +EM  T  +P V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           L+ G  +    ++   L +EM+  G+  D  TY  LI G+ K
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 3/272 (1%)

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + +GF  S+  ++ LI   C+      A +    M++ G+ P + T N+L+  F K  + 
Sbjct: 144 DRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  +++EM    +  +V T+N +IN   + G  +        M  +G+K +I+TYN +
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           + G C  G+ + A  ++  + +  + P++ TY +LI+G C +   E A ++++ M++ G 
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           RP+  I+  L+  FC   + D A+    EML+K ++P     + L   L    + + A  
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 530 LFRKMEIRGLLPKGFDKLRTIN--CAPENGEK 559
           + ++++ +G+ P        IN  C   N +K
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKK 414


>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
          Length = 676

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 230/454 (50%), Gaps = 4/454 (0%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           L+H++   + AL  HL    +  VLL+ Q D   +L FF WV+       + + + I++H
Sbjct: 131 LLHTE---VNALLPHLGAQEISRVLLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIIVH 187

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
            L  +R F  +   L  +++    DLP + +F +++     C+  P+VFD+L K Y    
Sbjct: 188 TLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMG 247

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R    +F +M   GF+P + + N  L+ LL     D     Y+EM R  I+PN+YT N
Sbjct: 248 RVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFN 307

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++ H  CK G   +  +  + ME  GF P + TYNTLI+ +C KG L  A     +M + 
Sbjct: 308 ILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRR 367

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ P+++++  L+ G CK+G++ EA+++F  M    +SP++VTYNTLI+GY + G  +  
Sbjct: 368 GVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQES 427

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            SL  +M+ NGI  D  T   L+ G  KEGK   A  LV +L +  +  +   YS LI  
Sbjct: 428 RSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVA 487

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C       A  L + M + G +    I+  L+ +FCQ +    A  + +EM++K + P+
Sbjct: 488 LCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPN 547

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 +   L    +      L  +M   G LP
Sbjct: 548 LATYRAVJGCLSRLSRSMEGESLVGEMVASGXLP 581



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P I + N  ++S     R+D A   YK M R  + P++ +   +M+  CK G
Sbjct: 328 KMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEG 387

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A ++F  M   G  P + TYNTLI G+C +G +  +    + M  NGI P+  T  
Sbjct: 388 RVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCW 447

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G+ K+GK   A  +  E++   VS +   Y+ LI    +        +L E M ++
Sbjct: 448 VLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQD 507

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G K ++  YN LI   C+     +A  L  ++    + PN +TY A+J        S   
Sbjct: 508 GHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEG 567

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
             L   M+ SG  P+  I   L   +C+  D D+A  +L
Sbjct: 568 ESLVGEMVASGXLPDLEICRALFYGYCRENDIDKAESLL 606



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 110/228 (48%), Gaps = 5/228 (2%)

Query: 320 FKNLM---EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           FKNL+   E     P  + F+ L+  + + G++ E  R F  M      P V+T N L+N
Sbjct: 219 FKNLILCTEDCNWDP--VVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLN 276

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  ++  ++    +YEEM R GI  ++ T+N L   LCK+G T K    ++ +++    P
Sbjct: 277 GLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDP 336

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY+ LI   C +   + AF LYK M R G  P+   +  LM+  C+      A ++ 
Sbjct: 337 DIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLF 396

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             M+ + ++PD +  + L  G    GK + +  L   M   G+ P  F
Sbjct: 397 HRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSF 444



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 132/318 (41%), Gaps = 35/318 (11%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + ++ L  +Y  + +  +A   +  M   G +P + S    ++ L    RV  A  
Sbjct: 335 DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQ 394

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    +SP++ T N ++H +CK G ++ +  +  +M   G  P   T   L+ G+ 
Sbjct: 395 LFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYG 454

Query: 310 NKGLLSLAMKF--------------------------------KNLMEK---NGIQPNVI 334
            +G    A+                                  KNL+E+   +G +  + 
Sbjct: 455 KEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELE 514

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI  FC+   + EA  +  EM    + PN+ TY  +J    ++  S  G SL  EM
Sbjct: 515 IYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEM 574

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +G   D+    AL  G C+E    KA  L+    K   + +  +++ALI     + + 
Sbjct: 575 VASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKGDI 634

Query: 455 ERAFQLYKSMIRSGCRPN 472
            R+ ++   M++ G  PN
Sbjct: 635 ARSLEIQDMMLKMGLLPN 652



 Score = 39.7 bits (91), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 58/150 (38%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           +E  N+ + S    + +  AL    EM    I PN+ T   V+    +L        +  
Sbjct: 513 LEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVG 572

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M + G +P +     L  G+C +  +  A    +   K     +  +FN LI     KG
Sbjct: 573 EMVASGXLPDLEICRALFYGYCRENDIDKAESLLSFXAKEFQIHDTESFNALIRITSAKG 632

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLING 377
            +  +  I   M    + PN +T   +I+G
Sbjct: 633 DIARSLEIQDMMLKMGLLPNPLTCKYVIDG 662


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 248/488 (50%), Gaps = 43/488 (8%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           S W  +  + + LTP  +   LL + +   + L+F      HK S     T  + + I+ 
Sbjct: 52  SQWHFIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFH-HKLSDA--RTLCLAIVIVA 108

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFR 210
           +    K +  +L+  L   + +   ++F+ +  S  R+   S +VFD L K+     +  
Sbjct: 109 RLPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRAD 168

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + F  M++ G LP IE+CN  LS  L   R + A   Y EM R RI  +VYT N+++
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMI 228

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  CK G +++A +   +ME+ G  P++ TYNT++ G+C+ G +  A      M++  I+
Sbjct: 229 NVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIE 288

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+  T+ +LI G CK+G+L EA++IF EM    + P+ V YNTLI+G+   GN +M ++ 
Sbjct: 289 PDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAY 348

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EML+ GI   + TYN+LI  L  E +T +A  ++K++ +  + P+A TY+ LI G C 
Sbjct: 349 KDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCR 408

Query: 451 RKNSERAFQLYKSMIRSGCRPNKH-----------------------------------I 475
             N+++AF L+  M+ SG +P K                                    +
Sbjct: 409 CANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIM 468

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRK 533
           F  L+   C N +   A E+L +M    + PD +  + +  G  HC  GK E A +LF +
Sbjct: 469 FNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQG--HCREGKVEEARELFDE 526

Query: 534 MEIRGLLP 541
           M+ RG+ P
Sbjct: 527 MKRRGIKP 534



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 177/351 (50%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS   F+++        K + A D    M   G  P I + N  +     S RV+ A   
Sbjct: 219 SSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAI 278

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+R +I P+ +T   ++   CK G +E A ++F+ M   G  PS   YNTLI G CN
Sbjct: 279 LTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCN 338

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L +A  +K+ M K GI P + T+N+LI     + +  EA  +  E++   +SP+ +T
Sbjct: 339 KGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LINGY +  N++    L++EML +GIK    TY +L+  L K+ + K+A  L K + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              ++P+   ++ALI G C   N + AF+L K M R    P++  F  +M   C+    +
Sbjct: 459 SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A E+  EM  + + PD I  + L SG    G  + A ++  +M   G  P
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 166/341 (48%), Gaps = 2/341 (0%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D+IL + +     P    +  L      + +   A+  F +M   G  P     N  +  
Sbjct: 276 DAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDG 335

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
             +   +D+A  +  EM +  ISP + T N ++HA       + A  + K ++  G  P 
Sbjct: 336 FCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPD 395

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYN LI+G+C       A    + M  +GI+P   T+ +L+    KK ++ EA+ +F 
Sbjct: 396 AITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFK 455

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           ++ +  V P+V+ +N LI+G+    N +    L ++M R  +  D +T+N ++ G C+EG
Sbjct: 456 KITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREG 515

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K ++A  L  ++ +  + P+  +++ LI+G   R + + AF++   M+ +G  P    + 
Sbjct: 516 KVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYN 575

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+   C+N++ D A E+L EM+ K M PD      L  G+
Sbjct: 576 ALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 114/222 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y      + A     +M   G  P  ++    L  L    R+  A   +K+
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    + P+V   N ++   C    ++ A E+ K+M+ M   P   T+NT++ GHC +G 
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M++ GI+P+ I+FNTLI G+ ++G + +A R+ +EM  T  +P V+TYN 
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           L+ G  +    ++   L +EM+  G+  D  TY  LI G+ K
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 135/272 (49%), Gaps = 3/272 (1%)

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + +GF  S+  ++ LI   C+      A +    M++ G+ P + T N+L+  F K  + 
Sbjct: 144 DRLGFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRT 202

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  +++EM    +  +V T+N +IN   + G  +        M  +G+K +I+TYN +
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTI 262

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           + G C  G+ + A  ++  + +  + P++ TY +LI+G C +   E A ++++ M++ G 
Sbjct: 263 VHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGL 322

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           RP+  I+  L+  FC   + D A+    EML+K ++P     + L   L    + + A  
Sbjct: 323 RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAEC 382

Query: 530 LFRKMEIRGLLPKGFDKLRTIN--CAPENGEK 559
           + ++++ +G+ P        IN  C   N +K
Sbjct: 383 MIKEIQEKGISPDAITYNILINGYCRCANAKK 414


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 247/456 (54%), Gaps = 9/456 (1%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           ++ S W  +  +S +LTP  + +VL  +     L  +F   +  H    L  +++ + + 
Sbjct: 56  VLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPH---CLDTKSYCLAVV 112

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRK 207
           +L +    K +  +L+ ++ +       +LFD +  S  R+   S +VFDLL +     +
Sbjct: 113 LLARLPSPKLALQLLKQVMGT-RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELR 171

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A   F  M++ G +P IE+CN  LS  L   R+++A   Y EM R RIS  VYT N
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  CK G +++A E    ME +GF P+V +YNT+I G+ ++G +  A +  + M   
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+P+  T+ +LI G CK+G+L EA+ +F +M    + PN VTYNTLI+GY   G+ E  
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S  +EM++ GI   + TYN L+  L  EG+  +A  ++K++ K  ++P+A TY+ LI G
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                N+++AF L+  M+  G  P    +  L+    +      A ++  ++L++ ++PD
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471

Query: 508 SIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
            I+ + +  G  HC  G  E A  L ++M+ + + P
Sbjct: 472 VIMFNAMVDG--HCANGNVERAFMLLKEMDRKSVPP 505



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 181/370 (48%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+   F+++        K + A +    M   GF P + S N  +        ++ A   
Sbjct: 225 STVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI 284

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              MR   I P+ YT   ++   CK G +E A  +F  M  +G +P+  TYNTLI G+CN
Sbjct: 285 LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 344

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L  A  +++ M K GI P+V T+N L+     +G++ EA+ +  EM+   + P+ +T
Sbjct: 345 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LINGY + GN++    L+ EML  GI+   +TY +LI  L +  + K+A  L + + 
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + P+   ++A++ G C   N ERAF L K M R    P++  F  LM   C+    +
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A  +L EM  + + PD I  + L SG    G  + A ++  +M   G  P        I
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584

Query: 551 NCAPENGEKE 560
            C  +N E +
Sbjct: 585 KCLCKNQEGD 594



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 197/400 (49%), Gaps = 19/400 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY---------- 186
           S T+ T +I++++L K  K K +   + G ++   F      +++I++ Y          
Sbjct: 224 SSTVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 187 RMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           R+ D+            +  L        +   A+  F +M + G +P   + N  +   
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
            +   ++ A  +  EM +  I P+V T N+++HA    G +  A ++ K M   G IP  
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN LI+G+   G    A    N M   GI+P  +T+ +LI+   ++ ++ EA+ +F +
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           +    VSP+V+ +N +++G+   GN E    L +EM R  +  D +T+N L+ G C+EGK
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A  L+ ++ +  + P+  +Y+ LI+G   R + + AF++   M+  G  P    +  
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           L+   C+N++ D A E+L EM+ K ++PD      L  G+
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 21/262 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPLVFD 197
           ++ T+++++H L    +   ++ +++ +       +P  + ++ ++  Y  C ++   FD
Sbjct: 366 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGNAKKAFD 423

Query: 198 L------------------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L                  L    + R + + A D F ++ D G  P +   N  +    
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 483

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  V+ A    KEM R  + P+  T N +M   C+ G +E A  +   M+  G  P   
Sbjct: 484 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 543

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  +G +  A + ++ M   G  P ++T+N LI   CK  +   A  +  EM
Sbjct: 544 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603

Query: 360 KATNVSPNVVTYNTLINGYGQV 381
               +SP+  TY +LI G G V
Sbjct: 604 VNKGISPDDSTYLSLIEGMGNV 625


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 247/456 (54%), Gaps = 9/456 (1%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           ++ S W  +  +S +LTP  + +VL  +     L  +F   +  H    L  +++ + + 
Sbjct: 78  VLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPH---CLDTKSYCLAVV 134

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRK 207
           +L +    K +  +L+ ++ +       +LFD +  S  R+   S +VFDLL +     +
Sbjct: 135 LLARLPSPKLALQLLKQVMGT-RIATNRELFDELTLSRDRLSVKSSIVFDLLVRVCCELR 193

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A   F  M++ G +P IE+CN  LS  L   R+++A   Y EM R RIS  VYT N
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  CK G +++A E    ME +GF P+V +YNT+I G+ ++G +  A +  + M   
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+P+  T+ +LI G CK+G+L EA+ +F +M    + PN VTYNTLI+GY   G+ E  
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S  +EM++ GI   + TYN L+  L  EG+  +A  ++K++ K  ++P+A TY+ LI G
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                N+++AF L+  M+  G  P    +  L+    +      A ++  ++L++ ++PD
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493

Query: 508 SIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
            I+ + +  G  HC  G  E A  L ++M+ + + P
Sbjct: 494 VIMFNAMVDG--HCANGNVERAFMLLKEMDRKSVPP 527



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/370 (31%), Positives = 181/370 (48%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+   F+++        K + A +    M   GF P + S N  +        ++ A   
Sbjct: 247 STVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI 306

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              MR   I P+ YT   ++   CK G +E A  +F  M  +G +P+  TYNTLI G+CN
Sbjct: 307 LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 366

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L  A  +++ M K GI P+V T+N L+     +G++ EA+ +  EM+   + P+ +T
Sbjct: 367 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 426

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LINGY + GN++    L+ EML  GI+   +TY +LI  L +  + K+A  L + + 
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + P+   ++A++ G C   N ERAF L K M R    P++  F  LM   C+    +
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A  +L EM  + + PD I  + L SG    G  + A ++  +M   G  P        I
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606

Query: 551 NCAPENGEKE 560
            C  +N E +
Sbjct: 607 KCLCKNQEGD 616



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 197/400 (49%), Gaps = 19/400 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY---------- 186
           S T+ T +I++++L K  K K +   + G ++   F      +++I++ Y          
Sbjct: 246 SSTVYTFNIMVNVLCKEGKLKKAREFI-GFMEGLGFKPNVVSYNTIIHGYSSRGNIEGAR 304

Query: 187 RMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           R+ D+            +  L        +   A+  F +M + G +P   + N  +   
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
            +   ++ A  +  EM +  I P+V T N+++HA    G +  A ++ K M   G IP  
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN LI+G+   G    A    N M   GI+P  +T+ +LI+   ++ ++ EA+ +F +
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           +    VSP+V+ +N +++G+   GN E    L +EM R  +  D +T+N L+ G C+EGK
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A  L+ ++ +  + P+  +Y+ LI+G   R + + AF++   M+  G  P    +  
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           L+   C+N++ D A E+L EM+ K ++PD      L  G+
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 118/262 (45%), Gaps = 21/262 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPLVFD 197
           ++ T+++++H L    +   ++ +++ +       +P  + ++ ++  Y  C ++   FD
Sbjct: 388 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGNAKKAFD 445

Query: 198 L------------------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L                  L    + R + + A D F ++ D G  P +   N  +    
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 505

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  V+ A    KEM R  + P+  T N +M   C+ G +E A  +   M+  G  P   
Sbjct: 506 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHI 565

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  +G +  A + ++ M   G  P ++T+N LI   CK  +   A  +  EM
Sbjct: 566 SYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625

Query: 360 KATNVSPNVVTYNTLINGYGQV 381
               +SP+  TY +LI G G V
Sbjct: 626 VNKGISPDDSTYLSLIEGMGNV 647


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/520 (31%), Positives = 257/520 (49%), Gaps = 30/520 (5%)

Query: 40  TLDKNPTFVNPSVSENSMKMNRNPIPIP---HRTLPEPKGQDLDFVNIAYSHLIHSDWKK 96
           TL KN   V  S S      N N I +    +  LPE +  + +FVN+ YS L   D  +
Sbjct: 23  TLTKN--LVPSSSSSLQTIQNSNSISLSNPLYSFLPENQNPN-NFVNLIYSSL-KRDNTQ 78

Query: 97  LTALST--------HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH---KPSSLTLETHSI 145
           LT L          HL    +  VLL+ Q D V +L FF WV+     KPS+L    + +
Sbjct: 79  LTLLQNDDIKGLIHHLGANEISRVLLRCQSDSVSALTFFNWVKNDLGLKPSTLN---YCL 135

Query: 146 VLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           +LH+L  +++F+ +   L  ++    D+D       +F  +    + C+  P++FDLL K
Sbjct: 136 ILHVLAWSKEFEQAMKFLTELILLVKDTDE-----DVFQCLFLCCQDCNWDPIIFDLLLK 190

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      +    TF Q+ + G++P + +CN  L+ LL S  + +    Y EM R  + P
Sbjct: 191 AYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVGVIP 250

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT N++ H FCK G I++  +  + ME  GF P + TYNTLI+G+C +G LS A    
Sbjct: 251 NSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLY 310

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
            +M +  + P+++++  L+ G CK+G++ EA+++   M    ++P+VV+YNTLI GY + 
Sbjct: 311 RIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKE 370

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G      SL  EM+ NGI  D  T   LI G  KEG    A  LV +L+K  +  +   Y
Sbjct: 371 GKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIY 430

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             L+   C       A  L + M + G  P+  I+  L+ + C+ +    A  +  E++ 
Sbjct: 431 DYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVV 490

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + P+ +    L   L   G+   A KL  +M   GL P
Sbjct: 491 GNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQP 530



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 151/346 (43%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +          D   +M + GF P I + N  ++      R+  A   Y+ M 
Sbjct: 255 FNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMY 314

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + P++ +   +M+  CK G +  A ++   M   G  P V +YNTLI G+C +G + 
Sbjct: 315 RRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKML 374

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            +      M  NGI P+  T   LI G+ K+G L  A  +  E++   VS +   Y+ L+
Sbjct: 375 ESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLV 434

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               +        +L E M + G    +  YN LI  LCK      A  L  ++   ++ 
Sbjct: 435 ASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNIN 494

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY ALI   C    S  A +L + M+  G +P+  I   ++  +C+ +D  +A  +
Sbjct: 495 PNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAESL 554

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L+   ++    DS   S L   +   G     M+L  +M   G  P
Sbjct: 555 LVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAP 600



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 1/288 (0%)

Query: 186 YRMCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           YR C    LV +  L        + R A     +M   G  P + S N  +       ++
Sbjct: 314 YRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKM 373

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             +     EM  N I P+ +T  +++  + K G +  A+ +   +E  G   S   Y+ L
Sbjct: 374 LESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYL 433

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           ++  C +     A      M + G  P+V  +N LI   CK   + +A  + +E+   N+
Sbjct: 434 VASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKAEIVVGNI 493

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +PN++TY  LI    ++G S     L EEML  G++ D     A+I G C+E    KA  
Sbjct: 494 NPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREKDAGKAES 553

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           L+    K   + ++ +YS L+   C   +  +  +L + M++ G  PN
Sbjct: 554 LLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPN 601



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 97/211 (45%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           I F+ L+  + K G + E  R F ++      P+V+  N L+NG  +  +  +   +Y E
Sbjct: 183 IIFDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGE 242

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R G+  +  T+N L    CK+G   K    ++ +++    P+  TY+ LI G C R  
Sbjct: 243 MGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGR 302

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              AF LY+ M R    P+   +  LM+  C+      A ++L  M+ + + PD +  + 
Sbjct: 303 LSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNT 362

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L  G    GK   +  L  +M   G+ P  F
Sbjct: 363 LICGYCKEGKMLESKSLLYEMIGNGIFPDSF 393



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 111/260 (42%), Gaps = 6/260 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y    K   +     +M   G  P   +C   +        +  AL    E+ 
Sbjct: 360 YNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELE 419

Query: 256 R--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    ISP++Y  + ++ + C+      A  + + M   G+IP V  YN LI   C    
Sbjct: 420 KFGVSISPDIY--DYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDC 477

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A+  K  +    I PN++T+  LI   C+ G+  EA ++  EM    + P+      
Sbjct: 478 VADALSLKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRA 537

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +  ++    SL     +     D  +Y+ L+  +C++G   K   L + + K  
Sbjct: 538 MIHGYCREKDAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVG 597

Query: 434 LVPNASTYSALITGQCVRKN 453
             PN+ T   +I G  +RKN
Sbjct: 598 FAPNSLTCKYMIDG--LRKN 615


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 234/446 (52%), Gaps = 10/446 (2%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           ++L A S+ LTP  ++  L +V+ D   +L  F       PS  +L +H+ +LHIL + R
Sbjct: 59  ERLLASSSPLTPALLQAALRRVRLDPDAALHLFRLA----PSRPSLVSHAQLLHILARAR 114

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           +F  + ++L  +           LF  +   YR    S + FDLL + +A   +  +A +
Sbjct: 115 RFHDARALLSSLPPH-----AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALN 169

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F  M   G  P + SCN+ L+ L+ S    +A   Y +MR   + P+ +T+ ++  A+C
Sbjct: 170 VFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           + G + +AVE  + ME MG   ++  Y+ ++  +C  G    A +    +++ G+ PNV+
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           T+  L+ G+CK G++ EA R+  EMK T ++  + V Y  +INGY Q G  +    +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   GI V++  YN +I GLCK G+ ++   ++++++   + P+  +Y+ LI G C   +
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             +AF++ + M+R+G       +  L+  FC     D A  +   ML++ +AP+ I  S 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  GL   GK E A+ L+++   RGL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGL 495



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/382 (28%), Positives = 175/382 (45%), Gaps = 26/382 (6%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    L +  LF  Y    +   AT    +M   GF P +E  N F++    +++     
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM    +SPN+ T   ++  +CK G +  A  ++  M + G  P+V   + L+S  
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 309 CNKGLLSLA----MKFKNL----------MEKNGIQPNV------------ITFNTLIFG 342
             +G +  A     K  N+          +E + I   V            + +N +IFG
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G++ +A  +F  ++     P+  TY++LI+G    G+ +   SL + ML  G+  +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN+LI GLCK GK  +A  L   L    + PN  TY+ LI   C    +  AF+L +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G +P    + +L+   C     + A ++L +M+E  + P+ I    L  G    G
Sbjct: 830 KMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 889

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
             E   KL+ +M IRGLLP  +
Sbjct: 890 NMEEISKLYDEMHIRGLLPTNW 911



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 181/372 (48%), Gaps = 1/372 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE-SCNKFLSSLLDSERVDIALGFYK 252
           + + LL K Y    +   A     +M++ G + + E +    ++      R+D A     
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EMR   I  N++  N +++  CKLG +E   +V + ME +G  P   +YNTLI G+C +G
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG 408

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A +   +M +NG+    +T+NTL+ GFC    + +A R++  M    V+PN ++ +
Sbjct: 409 SMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS 468

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++G  + G +E   +L++E L  G+  +++T+N +I GLCK G+  +A  L+  + + 
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P++ TY  L  G C       A  L   M   G  P+  +F   ++     + + + 
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKV 588

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            ++  EM  + ++P+ +    L +G    G    A  L+ +M   G+ P  F     ++C
Sbjct: 589 NDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC 648

Query: 553 APENGEKESGGL 564
             + G+ +   L
Sbjct: 649 FYKEGKVDEANL 660



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 167/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + ++   Y  R +  +AT    +MRD G    +   N  ++ L    R++      +E
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ Y+ N ++  +C+ G + +A E+ + M   G   +  TYNTL+ G C+   
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++   LM K G+ PN I+ +TL+ G  K GK  +A  ++ E  A  ++ NV+T+NT
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  ++G       L + M       D LTY  L  G CK G+   A +L+  ++   
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   +++ ITG  + K   +   ++  M   G  PN   +  L++ +C+  +   A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  EM+   M P+  I S L S  +  GK + A  + +K+    ++P
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 26/380 (6%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ L ++ L K +       +A   +  M   G  P   SC+  L  L  + + + AL  
Sbjct: 427 ATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +KE     ++ NV T N V++  CK+G +  A E+   M+ +   P   TY TL  G+C 
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK 546

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L  A    N ME  G  P+V  FN+ I G     + H+ N I SEM A  +SPN+VT
Sbjct: 547 LGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVT 606

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI G+ + GN     +LY EM+ NG+  ++   +AL+    KEGK  +A  +++ L 
Sbjct: 607 YGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV 666

Query: 431 KNSLVPNAST--------------------------YSALITGQCVRKNSERAFQLYKSM 464
              ++P  S                           ++ +I G C       A  L++S+
Sbjct: 667 NIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESL 726

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
                 P+   +  L+     +   D A  +   ML   + P+ I  + L  GL   GK 
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A+ LF K++ +G+ P G 
Sbjct: 787 SRAVNLFNKLQSKGISPNGI 806



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 124/216 (57%), Gaps = 1/216 (0%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           S NV   N+++   CK G I  A  +F+++ +  F+P   TY++LI G    G +  A  
Sbjct: 698 SANV-MWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFS 756

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            +++M   G+ PN+IT+N+LI+G CK GKL  A  +F+++++  +SPN +TYNTLI+ Y 
Sbjct: 757 LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G +     L ++M+  GI+  ++TY+ LI GLC +G  ++A  L+  + +N++ PN  
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           TY  LI G     N E   +LY  M   G  P   I
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWI 912


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  237 bits (605), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 234/446 (52%), Gaps = 10/446 (2%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           ++L A S+ LTP  ++  L +V+ D   +L  F       PS  +L +H+ +LHIL + R
Sbjct: 59  ERLLASSSPLTPALLQAALRRVRLDPDAALHLFRLA----PSRPSLVSHAQLLHILARAR 114

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           +F  + ++L  +           LF  +   YR    S + FDLL + +A   +  +A +
Sbjct: 115 RFHDARALLSSLPPH-----AEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALN 169

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F  M   G  P + SCN+ L+ L+ S    +A   Y +MR   + P+ +T+ ++  A+C
Sbjct: 170 VFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYC 229

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           + G + +AVE  + ME MG   ++  Y+ ++  +C  G    A +    +++ G+ PNV+
Sbjct: 230 RDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVV 289

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           T+  L+ G+CK G++ EA R+  EMK T ++  + V Y  +INGY Q G  +    +  E
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   GI V++  YN +I GLCK G+ ++   ++++++   + P+  +Y+ LI G C   +
Sbjct: 350 MRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGS 409

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             +AF++ + M+R+G       +  L+  FC     D A  +   ML++ +AP+ I  S 
Sbjct: 410 MRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCST 469

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  GL   GK E A+ L+++   RGL
Sbjct: 470 LLDGLFKAGKTEQALNLWKETLARGL 495



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 181/372 (48%), Gaps = 1/372 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE-SCNKFLSSLLDSERVDIALGFYK 252
           + + LL K Y    +   A     +M++ G + + E +    ++      R+D A     
Sbjct: 289 VTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRN 348

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EMR   I  N++  N +++  CKLG +E   +V + ME +G  P   +YNTLI G+C +G
Sbjct: 349 EMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG 408

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A +   +M +NG+    +T+NTL+ GFC    + +A R++  M    V+PN ++ +
Sbjct: 409 SMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCS 468

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++G  + G +E   +L++E L  G+  +++T+N +I GLCK G+  +A  L+  + + 
Sbjct: 469 TLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKEL 528

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P++ TY  L  G C       A  L   M   G  P+  +F   ++     + + + 
Sbjct: 529 RCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKV 588

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            ++  EM  + ++P+ +    L +G    G    A  L+ +M   G+ P  F     ++C
Sbjct: 589 NDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSC 648

Query: 553 APENGEKESGGL 564
             + G+ +   L
Sbjct: 649 FYKEGKVDEANL 660



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 167/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + ++   Y  R +  +AT    +MRD G    +   N  ++ L    R++      +E
Sbjct: 325 VAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQE 384

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ Y+ N ++  +C+ G + +A E+ + M   G   +  TYNTL+ G C+   
Sbjct: 385 MEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHA 444

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++   LM K G+ PN I+ +TL+ G  K GK  +A  ++ E  A  ++ NV+T+NT
Sbjct: 445 IDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNT 504

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  ++G       L + M       D LTY  L  G CK G+   A +L+  ++   
Sbjct: 505 VINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   +++ ITG  + K   +   ++  M   G  PN   +  L++ +C+  +   A 
Sbjct: 565 FAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEAC 624

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  EM+   M P+  I S L S  +  GK + A  + +K+    ++P
Sbjct: 625 NLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIP 672



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 168/380 (44%), Gaps = 26/380 (6%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ L ++ L K +       +A   +  M   G  P   SC+  L  L  + + + AL  
Sbjct: 427 ATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNL 486

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +KE     ++ NV T N V++  CK+G +  A E+   M+ +   P   TY TL  G+C 
Sbjct: 487 WKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCK 546

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L  A    N ME  G  P+V  FN+ I G     + H+ N I SEM A  +SPN+VT
Sbjct: 547 LGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVT 606

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI G+ + GN     +LY EM+ NG+  ++   +AL+    KEGK  +A  +++ L 
Sbjct: 607 YGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLV 666

Query: 431 KNSLVPNAST--------------------------YSALITGQCVRKNSERAFQLYKSM 464
              ++P  S                           ++ +I G C       A  L++S+
Sbjct: 667 NIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESL 726

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
                 P+   +  L+     +   D A  +   ML   + P+ I  + L  GL   GK 
Sbjct: 727 RNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKL 786

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A+ LF K++ +G+ P G 
Sbjct: 787 SRAVNLFNKLQSKGISPNGI 806



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 168/382 (43%), Gaps = 45/382 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    L +  LF  Y    +   AT    +M   GF P +E  N F++    +++     
Sbjct: 530 CPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVN 589

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM    +SPN+ T   ++  +CK G +  A  ++  M + G  P+V   + L+S  
Sbjct: 590 DIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCF 649

Query: 309 CNKGLLSLA----MKFKNL----------MEKNGIQPNV------------ITFNTLIFG 342
             +G +  A     K  N+          +E + I   V            + +N +IFG
Sbjct: 650 YKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFG 709

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G++ +A  +F  ++     P+  TY++LI+G    G+ +   SL + ML  G+  +
Sbjct: 710 LCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPN 769

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN+LI GLCK GK  +A  L   L    + PN  TY+ LI   C    +  AF+L +
Sbjct: 770 IITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQ 829

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G                     + A ++L +M+E  + P+ I    L  G    G
Sbjct: 830 KMVEEGY-------------------MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSG 870

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
             E   KL+ +M IRGLLP  +
Sbjct: 871 NMEEISKLYDEMHIRGLLPTNW 892


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/519 (31%), Positives = 247/519 (47%), Gaps = 26/519 (5%)

Query: 29  FPFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSH 88
           FP R LST   +LD  P   N           + P   P+ T   P     D   I  S 
Sbjct: 9   FPKRCLSTRFPSLD--PKLNN----------TKTPFSSPNSTYTTPNSHTFDTPTI--SQ 54

Query: 89  LIHSD-WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVL 147
           LI    W KL  +     P  +   L   +    L L +F W Q    +   +E    +L
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLL 114

Query: 148 HILTKNRKFKSSESILRGILDS---DSFDLPSKLFDS--ILYSYRMCDSSPLVFDLLFKT 202
           H+L   + +      +R +LDS   ++    S +F S  +L S+   +S  ++ D+L   
Sbjct: 115 HLLANAKNYNK----IRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS--IIVDMLVWA 168

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y    +   A + F +  DYGF     SCN  L SL+   R+ +    YKEM R RI  N
Sbjct: 169 YVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVN 228

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T ++V++  CK+G  ++A +V ++M++ GF PSV TYNT+I G+C  G +  A     
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M    I PN ITFN LI GFC+   +  A ++F EM+   + PNVVTYN+LING    G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L ++M   G+K +++TYNALI G CK+   K+A  ++ D+ K  L PN  T++
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI         + AF L   M+ +G  PN   +  L+  FC+  +   A ++  EM   
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  D +  + L   L   G+   A++L  +M   GL P
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNP 507



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 188/357 (52%), Gaps = 2/357 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + FD++        KF+ A D    M+ +GF P + + N  +     + ++  A    KE
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   RI PN  T N+++  FC+   +  A +VF+ M+  G  P+V TYN+LI+G C+ G 
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+  ++ M   G++PNV+T+N LI GFCKK  L EA  +  ++    ++PNV+T+NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ YG+ G  +    L   ML  G+  ++ TYN LI+G C+EG  K+A  L K+++ N 
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L  +  TY+ L+   C +  + +A +L   M   G  P+   +  L+  + +  +   A 
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GFDKLR 548
            V   M +K    + +  + L  G  + GK E A +L  +M  +GL+P    +D LR
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILR 586



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 16/314 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F++L   +   +    A   F +M+  G  P + + N  ++ L  + ++D ALG   +
Sbjct: 300 ITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDK 359

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PNV T N +++ FCK  +++ A E+  ++   G  P+V T+NTLI  +   G 
Sbjct: 360 MSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGR 419

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A   +++M   G+ PNV T+N LI GFC++G + EA ++  EM+   +  ++VTYN 
Sbjct: 420 MDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNI 479

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++   + G +     L +EM   G+    LTYNALI G  +EG +  A  +   ++K  
Sbjct: 480 LVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKG 539

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              N  TY+ LI G C +   E A +L   M+  G  PN+  +++L              
Sbjct: 540 RRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRD------------ 587

Query: 494 EVLLEMLEKCMAPD 507
               EM+EK   PD
Sbjct: 588 ----EMMEKGFIPD 597


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/495 (30%), Positives = 252/495 (50%), Gaps = 42/495 (8%)

Query: 87  SHLIHS----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLET 142
           S L+HS     W  +  ++ HLTP  +   L  ++ +  L L   + +Q H P SL L T
Sbjct: 37  STLLHSIESSQWHFIEQVAPHLTPSLLSSTLTTLRHNPQLVLHLLSHLQNH-PHSLDLAT 95

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS-SPLVFDLLFK 201
            S+ + +L +    K S ++++ ++ S +      +FD +  +    D+ + L+FDLL +
Sbjct: 96  SSLAICVLYRLPSPKPSINLIQRLILSPTCT-NRTIFDELALARDRVDAKTTLIFDLLVR 154

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y   KK   A + F  +++ GF+P IE+CN+ LS  L   R  +A   Y EM R  I  
Sbjct: 155 AYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRS 214

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++YT N++++  CK G +++A E   +ME++G  P+V TYNT+I GHC +G    A    
Sbjct: 215 SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIF 274

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+  G++P+  T+N+ I G CK+G+L EA+ +  +M    + PN VTYN LI+GY   
Sbjct: 275 QTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNK 334

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ +   +  +EM+  GI   ++TYN  I  L  EG+   A  ++K++ +  ++P+A T+
Sbjct: 335 GDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTH 394

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCR------------------------------- 470
           + LI G C   +++RAF L   M+  G +                               
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454

Query: 471 ----PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
               P+  +F  L+   C N + DRA ++L EM    + PD I  + L  G    GK E 
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEE 514

Query: 527 AMKLFRKMEIRGLLP 541
           A +L  +M+ RG+ P
Sbjct: 515 ARQLLDEMKRRGIKP 529



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 5/382 (1%)

Query: 182 ILYS--YRM-CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           +LY+  +RM   SS   F+++        K + A +    M   G  P + + N  +   
Sbjct: 202 VLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGH 261

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               +   A   ++ M+   + P+ YT N  +   CK G +E A  +   M   G +P+ 
Sbjct: 262 CLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNA 321

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN LI G+CNKG L  A  +++ M   GI  +++T+N  I     +G++ +A+ +  E
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M+   + P+ VT+N LINGY + G+++    L +EM+  GI+  ++TY +LI  L K  +
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A  L   + +  L+P+   ++ALI G C   N +RAFQL K M      P++  +  
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           LM  +C+    + A ++L EM  + + PD I  + L SG    G  + A ++  +M   G
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561

Query: 539 LLPK--GFDKLRTINCAPENGE 558
             P    ++ L    C  + GE
Sbjct: 562 FDPTILTYNALIQGLCKNQEGE 583



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 167/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   +  R KF+ A   F  M+D G  P   + N F+S L    R++ A G   +
Sbjct: 252 VTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICK 311

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T N ++  +C  G +++A      M S G + S+ TYN  I     +G 
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGR 371

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M + G+ P+ +T N LI G+C+ G    A  +  EM    + P +VTY +
Sbjct: 372 MGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTS 431

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI   G+    +   +L+ ++ + G+  DI+ +NALI G C  G   +A  L+K++D   
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++P+  TY+ L+ G C     E A QL   M R G +P+   +  L+S + +  D   A 
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAF 551

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            V  EM+     P  +  + L  GL    + E A +L ++M  +G+ P
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITP 599



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 159/301 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A+   C+M + G +P   + N  +    +   +D A  +  EM    I  ++ T N
Sbjct: 301 RLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYN 360

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           + +HA    G +  A  + K M   G +P   T+N LI+G+C  G    A    + M   
Sbjct: 361 LFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GIQP ++T+ +LI+   K+ ++ EA+ +FS+++   + P+++ +N LI+G+   GN +  
Sbjct: 421 GIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRA 480

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L +EM    +  D +TYN L+ G C+EGK ++A  L+ ++ +  + P+  +Y+ LI+G
Sbjct: 481 FQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISG 540

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
              R + + AF++   M+ +G  P    +  L+   C+N++ + A E+L EM+ K + PD
Sbjct: 541 YSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPD 600

Query: 508 S 508
            
Sbjct: 601 D 601



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 138/283 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y ++     A     +M   G +  + + N F+ +L    R+  A    KE
Sbjct: 322 VTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKE 381

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+  T N++++ +C+ G  +RA  +   M   G  P++ TY +LI     +  
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR 441

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    + +++ G+ P++I FN LI G C  G +  A ++  EM    V P+ +TYNT
Sbjct: 442 MKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNT 501

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ GY + G  E    L +EM R GIK D ++YN LI G  K G  K A  +  ++    
Sbjct: 502 LMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTG 561

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
             P   TY+ALI G C  +  E A +L K M+  G  P+   +
Sbjct: 562 FDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 134/255 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S + ++L         +  +A +   +MR+ G +P   + N  ++          A G 
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             EM    I P + T   +++   K   ++ A  +F  ++  G +P +  +N LI GHC 
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA 473

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G +  A +    M+   + P+ IT+NTL+ G+C++GK+ EA ++  EMK   + P+ ++
Sbjct: 474 NGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTLI+GY + G+ +    + +EM+  G    ILTYNALI GLCK  + + A  L+K++ 
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV 593

Query: 431 KNSLVPNASTYSALI 445
              + P+ STY ++I
Sbjct: 594 SKGITPDDSTYLSII 608



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 90/187 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L      R + + A   F +++  G LP I   N  +     +  +D A    KEM   +
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+  T N +M  +C+ G +E A ++   M+  G  P   +YNTLISG+  +G +  A 
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAF 551

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + ++ M   G  P ++T+N LI G CK  +   A  +  EM +  ++P+  TY ++I   
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611

Query: 379 GQVGNSE 385
             V + E
Sbjct: 612 ETVDDLE 618


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/489 (29%), Positives = 246/489 (50%), Gaps = 16/489 (3%)

Query: 65  PIPHRTLPEPKGQDLDFVNIAYSHL---------IHSDWKKLTALSTHLTPFRVKHVLLK 115
           P+ H  LP+ +  + + VNI YS L         ++     +  L  HL    +  VLL+
Sbjct: 43  PLYH-LLPQTQNPN-NIVNIVYSSLKQHNNNNSHLNLLQNDVKHLLPHLGTDEISRVLLR 100

Query: 116 VQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD---SDSF 172
            Q D + +L FF+WV+       +++ +  ++HIL  +++FK +   L  ++      SF
Sbjct: 101 CQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSF 160

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           +    +F ++L+  + C+  P++FD+L K Y      +    TF ++ + G +P + SCN
Sbjct: 161 N--EDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCN 218

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             L+ LL   R+D     YKEM R  I PN YT N++ H FC+ G +++  +  + ME  
Sbjct: 219 CLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEE 278

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           GF P + TYNTLIS +C KG L  A     +M +  + P+++++  L+ G CK+GK+ EA
Sbjct: 279 GFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREA 338

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           +++F  M    ++P++V++NTLI GY + G      SL  EM+ +GI  D +T   LI G
Sbjct: 339 HQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEG 398

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KE +   A  LV +L++  +  +   Y  L+   C       A  L + + + G  P 
Sbjct: 399 YRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPG 458

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I+  L+ + C+++    A  V  EM  + + P +I    L   L    +   A  L  
Sbjct: 459 VEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLME 518

Query: 533 KMEIRGLLP 541
           +M   G+LP
Sbjct: 519 EMLQSGMLP 527



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 1/307 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +          D   +M + GF P I + N  +S      R+D A   Y+ M 
Sbjct: 252 FNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMY 311

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + P++ +   +M+  CK G +  A ++F  M   G  P + ++NTLI G+C +G + 
Sbjct: 312 RRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMR 371

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            +    + M  +GI P+ +T   LI G+ K+ ++  A  +  E++   V  +   Y+ L+
Sbjct: 372 ESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLM 431

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               + G      SL + + + G    +  YN LI  LCK      A  +  ++   ++ 
Sbjct: 432 VSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIK 491

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A TY ALI   C    S  A  L + M++SG  P+  I   LM  +C+  D  + AE 
Sbjct: 492 PSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGK-AET 550

Query: 496 LLEMLEK 502
           LL+   K
Sbjct: 551 LLQTFAK 557



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 128/307 (41%), Gaps = 5/307 (1%)

Query: 179 FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
            D   Y YR+     ++ DL     L        K R A   F +M   G  P I S N 
Sbjct: 300 LDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNT 359

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +       ++  +     EM  + I P+  T  +++  + K   I  A+ +   +E  G
Sbjct: 360 LICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFG 419

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
              S   Y+ L+   C +G    A      + + G  P V  +N LI   CK   + +A 
Sbjct: 420 VPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADAL 479

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            + SEM   N+ P+ +TY  LI    +   S    SL EEML++G+  D     AL+   
Sbjct: 480 LVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVY 539

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CKE    KA  L++   K   + ++ +Y+ L+   C   ++ R  +L   M++ G  PN 
Sbjct: 540 CKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNI 599

Query: 474 HIFEMLM 480
             F  ++
Sbjct: 600 QTFRQMI 606



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 102/267 (38%), Gaps = 35/267 (13%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y    K R +     +M   G  P   +C   +       R+  AL    E+ 
Sbjct: 357 FNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELE 416

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  +  +    + +M + C+ G    A  + + +   G++P V  YN LI   C    ++
Sbjct: 417 RFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIA 476

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN-------- 367
            A+  K+ M    I+P+ IT+  LI   C+  +  EA  +  EM  + + P+        
Sbjct: 477 DALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALM 536

Query: 368 ---------------------------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                                        +YNTL+  Y +  ++     L + ML+ G  
Sbjct: 537 HVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFA 596

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVK 427
            +I T+  +I GL K    +K   L++
Sbjct: 597 PNIQTFRQMIHGLWKAMAVEKDKLLLE 623


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 162/514 (31%), Positives = 245/514 (47%), Gaps = 26/514 (5%)

Query: 29  FPFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSH 88
           FP R LST   +LD  P   N           + P   P+ T   P     D   I  S 
Sbjct: 9   FPKRCLSTRFPSLD--PKLNN----------TKTPFSSPNSTYTTPNSHTFDTPTI--SQ 54

Query: 89  LIHSD-WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVL 147
           LI    W KL  +     P  +   L   +    L L +F W Q    +   +E    +L
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLL 114

Query: 148 HILTKNRKFKSSESILRGILDS---DSFDLPSKLFDS--ILYSYRMCDSSPLVFDLLFKT 202
           H+L   + +      +R +LDS   ++    S +F S  +L S+   +S  ++ D+L   
Sbjct: 115 HLLANAKNYNK----IRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANS--IIVDMLVWA 168

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y    +   A + F +  DYGF     SCN  L SL+   R+ +    YKEM R RI  N
Sbjct: 169 YVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVN 228

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T ++V++  CK+G  ++A +V ++M++ GF PSV TYNT+I G+C  G +  A     
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M    I PN ITFN LI GFC+   +  A ++F EM+   + PNVVTYN+LING    G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L ++M   G+K +++TYNALI G CK+   K+A  ++ D+ K  L PN  T++
Sbjct: 349 KLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFN 408

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI         + AF L   M+ +G  PN   +  L+  FC+  +   A ++  EM   
Sbjct: 409 TLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGN 468

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +  D +  + L   L   G+   A++L  +M +
Sbjct: 469 GLKADLVTYNILVDALCKKGETRKAVRLLDEMTL 502



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 172/352 (48%), Gaps = 54/352 (15%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + FD++        KF+ A D    M+ +GF P + + N  +     + ++  A    KE
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   RI PN  T N+++  FC+   +  A +VF+ M+  G  P+V TYN+LI+G C+ G 
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+  ++ M   G++PNV+T+N LI GFCKK  L EA  +  ++    ++PNV+T+NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409

Query: 374 LINGYGQVG-----------------------------------NSEMGASLYEEMLRNG 398
           LI+ YG+ G                                   N +    L +EM  NG
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDL---DKNSLVPNASTYSALITGQCVRKNSE 455
           +K D++TYN L+  LCK+G+T+KA  L+ ++   +K     N  TY+ LI G C +   E
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLE 529

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            A +L   M+  G  PN+  +++L                  EM+EK   PD
Sbjct: 530 EANRLLNEMLEKGLIPNRTTYDILRD----------------EMMEKGFIPD 565



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 145/291 (49%), Gaps = 4/291 (1%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N   ++M++ A+ K G ++ A+E F      GF  S  + N ++     +G + +     
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M +  I  NV+TF+ +I G CK GK  +A  +  +MKA   SP+V+TYNT+I+GY + 
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G      +L +EM+   I  + +T+N LI G C++     A  + +++ +  L PN  TY
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++LI G C     + A  L   M   G +PN   +  L++ FC+ +    A E+L ++ +
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           + +AP+ I  + L       G+ + A  L   M   G+ P     + T NC
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP----NVSTYNC 444



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 62/153 (40%), Gaps = 9/153 (5%)

Query: 170 DSFDLPSKLFDSILYSYRMCDSS--PLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D++    ++ D+ L    M D+   P V  ++ L   +      + A     +M   G  
Sbjct: 412 DAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLK 471

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEM----RRNRISPNVYTLNMVMHAFCKLGIIER 281
             + + N  + +L        A+    EM    ++ R   N+ T N+++  FC  G +E 
Sbjct: 472 ADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGR-RANIVTYNVLIKGFCNKGKLEE 530

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           A  +   M   G IP+ TTY+ L      KG +
Sbjct: 531 ANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563


>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
          Length = 418

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 214/403 (53%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++ F  ++S+++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   + + F    ++C   L  L+  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G +  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M  +G+QP+V T++ LI G CK+ ++ EAN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y +ML  G   D++TYN LI GLCK+G  K+A YL+ ++ +  L P+ 
Sbjct: 252 CKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+L + MI+   R +  ++  L+   CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD    + + +     G  + A +L R+M+  G +P
Sbjct: 372 MLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        +   A   F +M D G +P   +    +     + R+D+A+  Y++M 
Sbjct: 209 YSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SP+V T N +++  CK G +++A  +   M   G  P   TY TLI G C +G L 
Sbjct: 269 NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFG--------------------------------- 342
            A + +  M K  I+ + + +  LIFG                                 
Sbjct: 329 TAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIM 388

Query: 343 --FCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG + +A+ +  EM+     P VVT
Sbjct: 389 NEFCKKGDVKKASELLREMQRNGRVPCVVT 418



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/302 (21%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G I  A+E F+  +   F +P  T  N L                
Sbjct: 65  DIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVL---------------- 108

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           ++LM+          +  L++GF            + E+       ++  +N L++ + +
Sbjct: 109 EHLMKXK--------YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A  L+  M+ +G  PN   F  L+   C+N   D A ++  +ML
Sbjct: 209 YSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            +  +PD +  + L  GL   G  + A  L  +M  +GL P        I+ + + G+ E
Sbjct: 269 NQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 244/489 (49%), Gaps = 39/489 (7%)

Query: 89  LIHS-DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVL 147
           LIHS  W  +  L+  +TP  +   L  + K   L+ +F T +       L +++  + +
Sbjct: 19  LIHSSQWHFIKHLAHKITPSLISTALTSLHKTPDLAFQFVTHIGF---GDLDIKSKCLAM 75

Query: 148 HILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
            +++     K S  +L+  ++S  + +     +  +    +   + +++DLL +     K
Sbjct: 76  AVISHAPNSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELK 135

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A + F  M+  G +P + +CN  LS  L S R + A   Y EM R RI  +V T N
Sbjct: 136 RGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFN 195

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  CK G +++A E    ME++G  P+V TYNT+I G+C++G +  A    +LM+  
Sbjct: 196 IMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR 255

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G++P+  T+ + I G CK+GKL EA+ +  +MK   + P  VTYNTLI+GY   GN EM 
Sbjct: 256 GVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA 315

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
               ++M+R G+   + TYN LI  L  + K  +A  ++K++ +  LVP++ TY+ LI G
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKH--------------------------------- 474
            C   N ++AF L+  MI  G +P +                                  
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPD 435

Query: 475 --IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             +F  L+   C N + DRA  +L EM +  + PD +  + L  G    GK E A +L  
Sbjct: 436 LIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIE 495

Query: 533 KMEIRGLLP 541
           +M+ RG+ P
Sbjct: 496 EMKSRGIKP 504



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 211/425 (49%), Gaps = 30/425 (7%)

Query: 115 KVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL 174
           + +K +VL  E F   +    SS+   T +I++++L K  K K ++  + G++++     
Sbjct: 171 RTEKAWVLYAEMF---RMRIKSSVV--TFNIMINVLCKEGKLKKAKEFI-GLMEALGIKP 224

Query: 175 PSKLFDSILYSY---RMCDSSPLVFDLL---------------FKTYAHRKKFRNATDTF 216
               +++I++ Y      + + ++FDL+                       K   A+   
Sbjct: 225 NVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGML 284

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF--- 273
            +M++ G  P   + N  +    +   +++A  +  +M R  + P V T NM++HA    
Sbjct: 285 EKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLD 344

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK+   + A  + K M   G +P   TYN LI+G+C  G +  A    + M   GIQP  
Sbjct: 345 CKM---DEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T+ +LI+   K+G++ +A+ +F ++    + P+++ +N LI+G+   GN +   ++ +E
Sbjct: 402 VTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKE 461

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M +  +  D +T+N L+ G C+EGK + A  L++++    + P+  +Y+ LI+G   R +
Sbjct: 462 MDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGD 521

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + AF++   M+  G  P    +  L+   C+NE+ D A ++L EM+ K + P+      
Sbjct: 522 MKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLS 581

Query: 514 LYSGL 518
           L  G+
Sbjct: 582 LIEGI 586



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 125/262 (47%), Gaps = 21/262 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPLVFD 197
           T+ T+++++H L  + K   ++ I++ +  S+   +P  + ++ ++  Y  C +    F 
Sbjct: 330 TVSTYNMLIHALFLDCKMDEADGIIKEM--SEKGLVPDSVTYNILINGYCRCGNVKKAFT 387

Query: 198 L------------------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L                  L    + R + + A D F ++   G  P +   N  +    
Sbjct: 388 LHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHC 447

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  +D A    KEM + ++ P+  T N +M   C+ G +E A E+ + M+S G  P   
Sbjct: 448 ANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHI 507

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  +G +  A + ++ M   G  P ++T+N LI G CK  +   A ++  EM
Sbjct: 508 SYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEM 567

Query: 360 KATNVSPNVVTYNTLINGYGQV 381
            +  ++PN  TY +LI G G V
Sbjct: 568 ISKGITPNDNTYLSLIEGIGNV 589



 Score = 42.4 bits (98), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 65/147 (44%), Gaps = 1/147 (0%)

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIK  +L Y+ LI   C+  +   A      +    ++P+    + +++       +E+A
Sbjct: 117 GIKTYVL-YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKA 175

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           + LY  M R   + +   F ++++  C+     +A E +  M    + P+ +  + +  G
Sbjct: 176 WVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHG 235

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G+ E A  +F  M+ RG+ P  +
Sbjct: 236 YCSRGRVEGARMIFDLMKCRGVKPDSY 262


>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
           ligustrinum]
          Length = 418

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/403 (32%), Positives = 213/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L+ +++   ++S+++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFAAILETKGAQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   R + F    ++C K L  L+  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTLI+G+   G L    
Sbjct: 132 YPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K  M  +G+ P+V T   LI G CK+ K+ EAN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 RLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++MLR G   D++TYN LI GLC++G  K+A  L+ ++    L P+ 
Sbjct: 252 CKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+L K MI    R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + P++   + + +G    G  + A KL ++M+  G +P
Sbjct: 372 MLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 35/198 (17%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A + F +M D G +P   +    +     S RVD+AL  YK+M R   SP++ T N
Sbjct: 221 KMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYN 280

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEK 326
            +++  C+ G +++A ++   M   G  P   TY TLI G C +G L  A +  K ++E+
Sbjct: 281 TLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEE 340

Query: 327 N----------------------------------GIQPNVITFNTLIFGFCKKGKLHEA 352
           +                                  G++P   T+  +I GFCK+G +  A
Sbjct: 341 SIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTA 400

Query: 353 NRIFSEMKATNVSPNVVT 370
           +++  EM+     P VVT
Sbjct: 401 SKLLKEMQRDGHVPCVVT 418


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 153/518 (29%), Positives = 239/518 (46%), Gaps = 62/518 (11%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSS---LTLETHSIVLHILT 151
           ++L +LS H TP    +VLL  Q D    L F TW Q    +     T     + LHIL 
Sbjct: 28  QRLASLSPHFTPQAASYVLLNSQSDQRTLLNFLTWAQAQAQAHNFFFTPHCKCLALHILV 87

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD---SSPLVFDLLFKTYAHRKK 208
           + + ++++ S+   +  +      + LF  +  ++ +C    SS  VFDL+ K+ +    
Sbjct: 88  RFKLYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGF 147

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLL-----------DSERVDIALGFYKEMRRN 257
              A         +GF P + S N  L +LL           D+ERV      +++M RN
Sbjct: 148 VPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERV------FRDMVRN 201

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            +SPNVYT N+++      G +E+ +   + ME  G  P+V TYNTLI   C K  +  A
Sbjct: 202 GVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEA 261

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M     M   G+  N+I++N++I G C KG++ E   +  EM+   + P+ VTYNTL+NG
Sbjct: 262 MALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNG 321

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           + + GN   G  L  EM+  G+  +++TY  LI  +CK G   +A  +   +    L PN
Sbjct: 322 FCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPN 381

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML------------------ 479
             TY+ LI G C +     A+++   MI SG  P+   +  L                  
Sbjct: 382 ERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILR 441

Query: 480 -----------------MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
                            ++ FC+  +  +A ++  EM+EK + PD++  S L  GL  C 
Sbjct: 442 GMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGL--CL 499

Query: 523 KDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + +L  A  LFR+M  RGL P        IN    +GE
Sbjct: 500 QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE 537



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 187/341 (54%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L      +KK + A      M   G    + S N  ++ L    R+       +E
Sbjct: 243 VTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEE 302

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+  T N +++ FCK G + + + +   M   G  P+V TY TLI+  C  G 
Sbjct: 303 MRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGN 362

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A++  + M   G++PN  T+ TLI GFC+KG ++EA ++ SEM  +  SP+VVTYN 
Sbjct: 363 LSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++GY  +G  +    +   M+  G+  D+++Y+ +I G C+E +  KA  + +++ +  
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++P+  TYS+LI G C+++    AF L++ M+R G  P++  +  L++ +C + +  +A 
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  EM+++   PD++  S L +GL+   + ++A +L  K+
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKL 583



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 144/352 (40%), Gaps = 20/352 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   Y    + + A      M + G  P + S +  ++       +  A    
Sbjct: 416 SVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMK 475

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +EM    + P+  T + ++   C    +  A ++F+ M   G  P   TY +LI+ +C  
Sbjct: 476 EEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G LS A++  + M + G  P+ +T++ LI G  KK +   A R+  ++      P+ VTY
Sbjct: 536 GELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTY 595

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NTLI                E    N  K    +   L+ G C +G   +A  + K + +
Sbjct: 596 NTLI----------------ENCSNNEFK----SVEGLVKGFCMKGLMNEADRVFKTMLQ 635

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            +  PNA+ Y+ +I G     N  +A+ LY  +  S    +      L+    +    D 
Sbjct: 636 RNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDE 695

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            + +L  +L  C   D+ +   L       G  +  + +  +M   GLLP G
Sbjct: 696 LSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDG 747



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 121/277 (43%), Gaps = 52/277 (18%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G LP   + +  +  L   +++  A   ++EM R  + P+  T   +++A+C  G
Sbjct: 477 EMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDG 536

Query: 278 IIERAVEVFKNMESMGFIP-SVT----------------------------------TYN 302
            + +A+ +   M   GF+P +VT                                  TYN
Sbjct: 537 ELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYN 596

Query: 303 TLIS---------------GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKK 346
           TLI                G C KGL++ A + FK ++++N  +PN   +N +I G  + 
Sbjct: 597 TLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNH-KPNAAIYNLMIHGHSRG 655

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G +H+A  ++ E++ ++ + + V    L+    + G ++  + L + +LR+    D    
Sbjct: 656 GNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVA 715

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
             L+    KEG       ++ ++ K+ L+P+   +S+
Sbjct: 716 KVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDGGIHSS 752


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 235/455 (51%), Gaps = 7/455 (1%)

Query: 90  IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           + +D K +    + L P  V  +LL +++D  L+L+FF W  +      T E++ I++H+
Sbjct: 113 LWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHL 172

Query: 150 LTKNRKFKSSESILRGILDSDSFDLP---SKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           + + R +  +   ++ ++ +   D+      +FD +  +  +C S   VFD+LF  +   
Sbjct: 173 VFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVEL 232

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
                A + F +MR++  LP   SCN  L  L  S    +   F+ +M    I+P+V+T 
Sbjct: 233 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 292

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++   CK G +E +  +F  M  MG  P V TYN+LI G+   G L       N M+ 
Sbjct: 293 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 352

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P++IT+N LI  +CK  K+  A   FSEMK   + PNVVTY+TLI+ + + G  + 
Sbjct: 353 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 412

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L+ +M R G+  +  TY +LI   CK G   +A  L+ D+ +  +  N  TY+AL+ 
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 472

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C       A ++++SM++ G  PN+ ++  L+  + + E  + A ++L +M E  + P
Sbjct: 473 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 532

Query: 507 DSIILSELYSGLHHCGKDELAMK--LFRKMEIRGL 539
           D I+   +  G  HC + +L     +  +M+ RG+
Sbjct: 533 DLILYGSIIWG--HCSQRKLEETKLILEEMKSRGI 565



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 169/348 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y            F +M+D G +P I + N  ++     E++  A  ++ E
Sbjct: 325 VTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 384

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ N + PNV T + ++ AFCK G+++ A+++F +M   G +P+  TY +LI  +C  G 
Sbjct: 385 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K  N M + G++ N++T+  L+ G CK G++ EA  +F  M    +SPN   Y  
Sbjct: 445 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 504

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++GY +    E    + ++M    IK D++ Y ++I G C + K ++   +++++    
Sbjct: 505 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  N    + +I        S  A   ++ M   G       + +L+   C+    + A 
Sbjct: 565 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAV 624

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    ML   + P+  + + L  GL      E A KLF +M+ RG+ P
Sbjct: 625 DYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP 672



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 10/354 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLDSE----RVDIAL 248
           + +  L   +      + A   F  MR  G LP     N+F  +SL+D+      +  A 
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLP-----NEFTYTSLIDANCKAGNLTEAW 449

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M +  +  N+ T   ++   CK G +  A EVF++M   G  P+   Y  L+ G+
Sbjct: 450 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 509

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  AMK    M +  I+P++I + ++I+G C + KL E   I  EMK+  +S N 
Sbjct: 510 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 569

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V   T+I+ Y + G S    + ++EM   G++  I+TY  LI GLCK G  + A      
Sbjct: 570 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCR 629

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN + Y++LI G C     E A +L+  M   G  P+   F  L+    ++ +
Sbjct: 630 MLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 689

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
              A  ++  M E  +  D  + + L SG   CG+   A K F +M  +G+LP+
Sbjct: 690 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 743



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 161/350 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++++           N+   F QMR+ G  P + + N  +        ++     +
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM+     P++ T N +++ +CK   + RA E F  M++ G  P+V TY+TLI   C +
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G++  A+K    M + G+ PN  T+ +LI   CK G L EA ++ ++M    V  N+VTY
Sbjct: 408 GMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 467

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L++G  + G       ++  ML++GI  +   Y AL+ G  K  + + A  ++K + +
Sbjct: 468 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            ++ P+   Y ++I G C ++  E    + + M   G   N  I   ++  + +      
Sbjct: 528 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 587

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A     EM +  +    +    L  GL   G  ELA+  F +M   GL P
Sbjct: 588 ALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 147/309 (47%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L  L  + R+  A   ++ M ++ ISPN      ++H + K   +E A+++ K M    
Sbjct: 470 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 529

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P +  Y ++I GHC++  L         M+  GI  N +   T+I  + K GK  +A 
Sbjct: 530 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 589

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
             F EM+   V   +VTY  LI+G  + G  E+    +  ML  G++ ++  Y +LI GL
Sbjct: 590 NFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 649

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK    + A  L  ++    + P+ + ++ALI G     N + A  L   M       + 
Sbjct: 650 CKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDL 709

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           H++  L+S F Q  +  +A +   EM+EK + P+ ++   L    +  G+ + A++L  +
Sbjct: 710 HVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 769

Query: 534 MEIRGLLPK 542
           ME  GL+ +
Sbjct: 770 MERMGLITE 778



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 4/290 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F  M   G  P  +     +   + +ER++ A+   K+M    I P++     ++ 
Sbjct: 483 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 542

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C    +E    + + M+S G   +     T+I  +   G  S A+ F   M+  G++ 
Sbjct: 543 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 602

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            ++T+  LI G CK G +  A   F  M +  + PNV  Y +LI+G  +    E    L+
Sbjct: 603 TIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG--QC 449
           +EM   G+  DI  + ALI G  K G  ++A  L+  + + ++  +   Y++L++G  QC
Sbjct: 663 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 722

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              +  R F  +  MI  G  P + +   L+  + +    D A E+  EM
Sbjct: 723 GELHQARKF--FNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/323 (23%), Positives = 147/323 (45%), Gaps = 23/323 (7%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RM----- 188
           L + T++ +L  L K  +   +E + R +L  D      +++ ++++ Y    RM     
Sbjct: 462 LNIVTYTALLDGLCKAGRMIEAEEVFRSML-KDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 189 -------CDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSS 237
                  C+  P  +++  +   +  ++K         +M+  G    P+I +    + +
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST--TIIDA 578

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
              + +   AL F++EM+   +   + T  +++   CK GI+E AV+ F  M S+G  P+
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPN 638

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V  Y +LI G C    +  A K  + M+  G+ P++  F  LI G  K G L EA  + S
Sbjct: 639 VAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLIS 698

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    +  ++  Y +L++G+ Q G        + EM+  GI  + +    L+    K G
Sbjct: 699 RMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG 758

Query: 418 KTKKAAYLVKDLDKNSLVPNAST 440
           +  +A  L  ++++  L+  ++T
Sbjct: 759 QLDEAIELKNEMERMGLITESAT 781



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 102/224 (45%), Gaps = 2/224 (0%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ L   F + G L EAN  FS M+     P   + N L++   + GN ++    + +M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  GI   + TYN +I  LCKEG  + +  L   + +  L P+  TY++LI G     + 
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E    L+  M   GC P+   +  L++ +C+ E   RA E   EM    + P+ +  S L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPEN 556
                  G  + A+KLF  M   GLLP  F     I  NC   N
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGN 444


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/479 (30%), Positives = 236/479 (49%), Gaps = 49/479 (10%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETH--SIVLHILT 151
           W+ L  +   L   R  H  L        +L+F  WV       L   TH  SI  HIL 
Sbjct: 7   WESLNHMEYKLASLRPVHGRL--------ALKFLNWVIQQPGLELRHLTHMLSITTHILV 58

Query: 152 KNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
           + R +++++SIL+ +       + SK +F +++ +Y +C S+P VFDLL + Y       
Sbjct: 59  RARLYENAKSILKHL---SQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMVG 115

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A +TF  M   GF P + +CN  L  L+   +V     F+KEM   R+ P+V T N+++
Sbjct: 116 DALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNILI 175

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  C  G +++A  + K ME  G++PSV TYNT+++ +C KG    A++  + M   GI+
Sbjct: 176 NVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIE 235

Query: 331 -----------------------------------PNVITFNTLIFGFCKKGKLHEANRI 355
                                              PN IT+N++I GF K+GK+  A RI
Sbjct: 236 ADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATRI 295

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F EM   N+ PN VTYN LI+G+   GN E   ++ E M   G K + ++Y+AL+ GLC+
Sbjct: 296 FQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCR 355

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             K + +  +++ +  N ++     Y+A+I G C       + +L   M++ G  P+   
Sbjct: 356 HAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVT 415

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           F +L++ FC+        E++ +M +  +AP+SII + L       G    A K++  M
Sbjct: 416 FSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAM 474



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 166/353 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ +   Y  + +++ A +   QM   G      + N  +  L  + R        
Sbjct: 202 SVVTYNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLL 261

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K+MR+  ISPN  T N +++ F K G I  A  +F+ M  +  +P+  TYN LI GHC+ 
Sbjct: 262 KKMRKRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHD 321

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A+    +ME  G +PN ++++ L+ G C+  K   +  I   M+   +    + Y
Sbjct: 322 GNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAY 381

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             +I+G  + G       L ++ML++G+  D++T++ LI G C+ GK K    ++  + K
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L PN+  Y+ LI   C   +   AF++Y +M R G   N  I  +L+S+ C++     
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           A      M +    P+SI    + +G  + G    A  +F +M   G  P  F
Sbjct: 502 AEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHF 554



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 160/358 (44%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           RM   + + ++ +   +    K   AT  F +M     LP   + N  +         + 
Sbjct: 267 RMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQ 326

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + M      PN  + + +++  C+    E +  + + M   G I     Y  +I 
Sbjct: 327 ALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMID 386

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  GLL+ ++K  + M K+G+ P+V+TF+ LI GFC+ GK+     I  +M    ++P
Sbjct: 387 GLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAP 446

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N + Y TLI  Y + G+      +Y  M R G   +    N L+  LCK+GK   A Y  
Sbjct: 447 NSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFF 506

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + K   VPN+ T+  +I G     N  +AF ++  MI++G  P+   +  L+   C+ 
Sbjct: 507 HHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRA 566

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             F  A  +L ++     A D++  + +       G    A+ LF +M  R +LP  +
Sbjct: 567 GKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSY 624



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 110/493 (22%), Positives = 194/493 (39%), Gaps = 97/493 (19%)

Query: 142 THSIVLHILTKNRKFKSSESILR-------------------GILDSDSFDLPSKLFDSI 182
           ++S +L+ L ++ KF+ S+SIL                    G+  +   +   KL D +
Sbjct: 345 SYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L    + D   + F +L   +    K +N  +  C+M   G  P        + +   + 
Sbjct: 405 LKDGVVPD--VVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            V  A   Y  M R     N +  N+++ + CK G +  A   F +M  +G +P+  T++
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+G+ N G    A    + M K G  P+  T+  L+   C+ GK  EA R+  ++   
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYI 582

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK---- 418
             + + VTYNT++    + G      +L++EM++  +  D  TY  +  GL + GK    
Sbjct: 583 PSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAA 642

Query: 419 --------------------------------TKKAAYLVKDLDKNSLV----------- 435
                                           +K A Y  +D++KN L            
Sbjct: 643 LHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILN 702

Query: 436 -------------------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
                                    P+ +TY+ L+ G   +KN  +   LY  M+R+G  
Sbjct: 703 GYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIF 762

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AM 528
           P+K     L+  FC++   D   ++L +ML   +A D    + L   + +C  DE+  A 
Sbjct: 763 PDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLI--MKYCETDEVGKAF 820

Query: 529 KLFRKMEIRGLLP 541
            L   M +  + P
Sbjct: 821 DLVNIMNLFDIFP 833



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 198/466 (42%), Gaps = 63/466 (13%)

Query: 133  HKPSSLTLETHSIVLHILTKNRKFKSSESILRGI------LDSDSFDL------------ 174
            H PS  T   +  +L  L +  KFK ++ +L  +      +D+ +++             
Sbjct: 549  HHPSHFT---YGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLT 605

Query: 175  -PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCN 232
                LFD ++    + DS    + ++F     R K   A   +  +   G + P      
Sbjct: 606  DAVALFDEMVQRNVLPDS--YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYT 663

Query: 233  KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES- 291
             F+  L  + +   AL F ++M +N +  ++   N++++ + ++G + +A ++F  M S 
Sbjct: 664  TFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSG 723

Query: 292  MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT---------------- 335
            +   PS+ TYN L+ G+  K  LS      N+M + GI P+ +T                
Sbjct: 724  ITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDV 783

Query: 336  -------------------FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                               FN LI  +C+  ++ +A  + + M   ++ P++ T++++I+
Sbjct: 784  GLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIIS 843

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
               +V   +    L  EML  G   D   Y AL+  +C+ G    A  L  +++   +  
Sbjct: 844  VLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISS 903

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
                 SAL+ G       E A  +   M+R    P    F  LM  FC+NE    A + L
Sbjct: 904  GDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALK-L 962

Query: 497  LEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + ++ C +  D I  + L SGL   G    A+KL+++++ RGL P
Sbjct: 963  KDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWP 1008



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 72/322 (22%), Positives = 145/322 (45%)

Query: 181  SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            ++++S      S   +++L   YA +K     ++ +  M   G  P   +C+  +     
Sbjct: 718  TMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCK 777

Query: 241  SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
            S  +D+ L   K+M  + ++ +  T NM++  +C+   + +A ++   M      P +TT
Sbjct: 778  SAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTT 837

Query: 301  YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            ++++IS       +  +    + M + G  P+   +  L+   C+ G +H A ++  EM+
Sbjct: 838  HDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEME 897

Query: 361  ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
            A  +S   V  + L+ G  + G  E    + + MLR  +   I T+  L+   C+     
Sbjct: 898  ALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLV 957

Query: 421  KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            +A  L   +D   +  +   Y+ LI+G C   +   A +LYK + + G  PN   + +L+
Sbjct: 958  EALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILI 1017

Query: 481  STFCQNEDFDRAAEVLLEMLEK 502
                 N+      EVLL+ L++
Sbjct: 1018 DAIFTNDISLAKGEVLLKDLQE 1039



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 151/353 (42%), Gaps = 4/353 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + FD +   Y +      A   F +M   G  P   +    L +L  + +   A    
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++     + +  T N ++    K G++  AV +F  M     +P   TY  + +G   +
Sbjct: 577 DKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRR 636

Query: 312 GLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A+ F  NL+ K  + P  + + T + G  + G+   A     +M+   +  +++ 
Sbjct: 637 GKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIA 696

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVD--ILTYNALILGLCKEGKTKKAAYLVKD 428
            N ++NGY ++G       ++  M+ +GI +   + TYN L+ G  K+    K + L   
Sbjct: 697 TNVILNGYSRMGKMAKAGDIFT-MMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNI 755

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + P+  T  +LI G C     +   +L K M+  G   ++  F ML+  +C+ ++
Sbjct: 756 MMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDE 815

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +A +++  M    + PD      + S L      + +  L  +M  RG +P
Sbjct: 816 VGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIP 868



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/349 (21%), Positives = 156/349 (44%), Gaps = 8/349 (2%)

Query: 197  DLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++   Y+   K   A D F  M       P + + N  L      + +      Y  M 
Sbjct: 698  NVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMM 757

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            R  I P+  T + ++  FCK  +++  +++ K M   G      T+N LI  +C    + 
Sbjct: 758  RTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVG 817

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             A    N+M    I P++ T +++I    +   + E++ +  EM      P+   Y  L+
Sbjct: 818  KAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALV 877

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            N   ++G+      L +EM   GI    +  +AL+ GL K GK ++A  ++  + + SL+
Sbjct: 878  NRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLI 937

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            P  +T++ L+   C  ++   A +L  +M     + +   + +L+S  C + D   A ++
Sbjct: 938  PTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKL 997

Query: 496  LLEMLEKCMAPD----SIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              E+ ++ + P+     I++  +++      K E+   L + ++ RG++
Sbjct: 998  YKEIKQRGLWPNMTTYCILIDAIFTNDISLAKGEV---LLKDLQERGVI 1043



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 138/333 (41%), Gaps = 26/333 (7%)

Query: 125  EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSIL 183
            + FT + +    S +L T++I+LH   K +      ++   ++ +  F  P KL   S++
Sbjct: 715  DIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIF--PDKLTCHSLI 772

Query: 184  YSYRMCDSSPL--------------------VFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
              +  C S+ L                     F++L   Y    +   A D    M  + 
Sbjct: 773  LGF--CKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFD 830

Query: 224  FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
              P + + +  +S L     V  +     EM      P+      +++  C++G I  A 
Sbjct: 831  IFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAF 890

Query: 284  EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            ++   ME++G        + L+ G    G +  A    + M +  + P + TF TL+  F
Sbjct: 891  KLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMF 950

Query: 344  CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            C+   L EA ++   M   +V  +V+ YN LI+G    G+      LY+E+ + G+  ++
Sbjct: 951  CRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNM 1010

Query: 404  LTYNALILGL-CKEGKTKKAAYLVKDLDKNSLV 435
             TY  LI  +   +    K   L+KDL +  ++
Sbjct: 1011 TTYCILIDAIFTNDISLAKGEVLLKDLQERGVI 1043



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 73/175 (41%)

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N   ++ LI  Y + G        +  M   G    + T N L+  L KE K        
Sbjct: 97  NPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFF 156

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++    + P+ ST++ LI   CV    ++A  L K M  SG  P+   +  +++ +C+ 
Sbjct: 157 KEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  A E++ +M  K +  D+   + L   L    +      L +KM  R + P
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISP 271


>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           microcephala]
          Length = 431

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 221/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F   I++C K L  L+  + 
Sbjct: 63  ETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R ++  +  L+S  
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 115/225 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+K D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 111/217 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 418

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 213/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++++++ ++     D  S +F++IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y       +A + F   R++ F    ++C K L   +  +      GFYKE+    
Sbjct: 72  LITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKSVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G +  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +GIQP+V T++ LI G CK+ K+++AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+ ++    Y+EMLR G   D++TYN LI GLCKEG  K+A  L+ ++    L P+ 
Sbjct: 252 CKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  C+      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G  ++  KL ++M+  G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 36/288 (12%)

Query: 311 KGLLSLAMKFKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIF------------- 356
           KG  S +  F+ ++E  G Q  +V  F+ LI  + + G LH+A   F             
Sbjct: 43  KGKDSASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFD 102

Query: 357 ----------------------SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
                                  E+       ++  +N L++ + + G   +  S+++E+
Sbjct: 103 TCRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEI 162

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            + G++  ++++N L+ G  + G   +   L   +  + + P+  TYS LI G C     
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKM 222

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A +L+  MI +G  PN   F  L+   C+    D A E   EML +  +PD I  + L
Sbjct: 223 NDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTL 282

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             GL   G  + A  L  +M ++GL P        I+ + + G+ E+ 
Sbjct: 283 IYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     +  +D+A+  YKEM 
Sbjct: 209 YSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------- 305
           R   SP++ T N +++  CK G +++A ++   M   G  P   TY TLI          
Sbjct: 269 RQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 306 -------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                    SG C +G    A K    M   G++P+  T+  +I
Sbjct: 329 TAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMII 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG +   +++  EM+     P VVT
Sbjct: 389 NEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 234/455 (51%), Gaps = 7/455 (1%)

Query: 90  IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           + +D K +    + L P  V  +LL +++D  L+L+FF W  +      T E++ I++H+
Sbjct: 54  LWNDPKIVVLFDSALAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHL 113

Query: 150 LTKNRKFKSSESILRGILDSDSFDLP---SKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           + + R +  +   ++ ++ +   D+      +FD +  +  +C S   VFD+LF  +   
Sbjct: 114 VFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVEL 173

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
                A + F +MR++  LP   SCN  L  L  S    +   F+ +M    I+P+V+T 
Sbjct: 174 GLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTY 233

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++   CK G +E +  +F  M  MG  P V TYN+LI G+   G L       N M+ 
Sbjct: 234 NVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD 293

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P++IT+N LI  +CK  K+  A   FSEMK   + PNVVTY+TLI+ + + G  + 
Sbjct: 294 VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQG 353

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  +M R G+  +  TY +LI   CK G   +A  L+ D+ +  +  N  TY+AL+ 
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLD 413

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C       A ++++SM++ G  PN+ ++  L+  + + E  + A ++L +M E  + P
Sbjct: 414 GLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKP 473

Query: 507 DSIILSELYSGLHHCGKDELAMK--LFRKMEIRGL 539
           D I+   +  G  HC + +L     +  +M+ RG+
Sbjct: 474 DLILYGSIIWG--HCSQRKLEETKLILEEMKSRGI 506



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 168/348 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y            F +M+D G +P I + N  ++     E++  A  ++ E
Sbjct: 266 VTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSE 325

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ N + PNV T + ++ AFCK G+++ A+++  +M   G +P+  TY +LI  +C  G 
Sbjct: 326 MKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGN 385

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K  N M + G++ N++T+  L+ G CK G++ EA  +F  M    +SPN   Y  
Sbjct: 386 LTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTA 445

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++GY +    E    + ++M    IK D++ Y ++I G C + K ++   +++++    
Sbjct: 446 LVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  N    + +I        S  A   ++ M   G       + +L+   C+    + A 
Sbjct: 506 ISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAV 565

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    ML   + P+  + + L  GL      E A KLF +M+ RG+ P
Sbjct: 566 DYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP 613



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 164/354 (46%), Gaps = 10/354 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLDSE----RVDIAL 248
           + +  L   +      + A      MR  G LP     N+F  +SL+D+      +  A 
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLP-----NEFTYTSLIDANCKAGNLTEAW 390

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M +  +  N+ T   ++   CK G +  A EVF++M   G  P+   Y  L+ G+
Sbjct: 391 KLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGY 450

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  AMK    M +  I+P++I + ++I+G C + KL E   I  EMK+  +S N 
Sbjct: 451 IKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANP 510

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V   T+I+ Y + G S    + ++EM   G++  I+TY  LI GLC+ G  + A      
Sbjct: 511 VISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCR 570

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN + Y++LI G C     E A +L+  M   G  P+   F  L+    ++ +
Sbjct: 571 MLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGN 630

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
              A  ++  M E  +  D  + + L SG   CG+   A K F +M  +G+LP+
Sbjct: 631 LQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPE 684



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 161/350 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++++           N+   F QMR+ G  P + + N  +        ++     +
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM+     P++ T N +++ +CK   + RA E F  M++ G  P+V TY+TLI   C +
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G++  A+K    M + G+ PN  T+ +LI   CK G L EA ++ ++M    V  N+VTY
Sbjct: 349 GMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTY 408

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L++G  + G       ++  ML++GI  +   Y AL+ G  K  + + A  ++K + +
Sbjct: 409 TALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            ++ P+   Y ++I G C ++  E    + + M   G   N  I   ++  + +      
Sbjct: 469 CNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSD 528

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A     EM +  +    +    L  GL   G  ELA+  F +M   GL P
Sbjct: 529 ALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 142/302 (47%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L  L  + R+  A   ++ M ++ ISPN      ++H + K   +E A+++ K M    
Sbjct: 411 LLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN 470

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P +  Y ++I GHC++  L         M+  GI  N +   T+I  + K GK  +A 
Sbjct: 471 IKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDAL 530

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
             F EM+   V   +VTY  LI+G  + G  E+    +  ML  G++ ++  Y +LI GL
Sbjct: 531 NFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C     + A  L  ++    + P+ + ++ALI G     N + A  L   M       + 
Sbjct: 591 CXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDL 650

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           H++  L+S F Q  +  +A +   EM+EK + P+ ++   L    +  G+ + A++L  +
Sbjct: 651 HVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNE 710

Query: 534 ME 535
           ME
Sbjct: 711 ME 712



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 130/290 (44%), Gaps = 4/290 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F  M   G  P  +     +   + +ER++ A+   K+M    I P++     ++ 
Sbjct: 424 AEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIW 483

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C    +E    + + M+S G   +     T+I  +   G  S A+ F   M+  G++ 
Sbjct: 484 GHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEA 543

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            ++T+  LI G C+ G +  A   F  M +  + PNV  Y +LI+G       E    L+
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG--QC 449
           +EM   G+  DI  + ALI G  K G  ++A  L+  + + ++  +   Y++L++G  QC
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              +  R F  +  MI  G  P + +   L+  + +    D A E+  EM
Sbjct: 664 GELHQARKF--FNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 119/272 (43%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  L   Y   ++  +A     QM +    P +      +       +++      +EM
Sbjct: 442 VYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEM 501

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +   IS N      ++ A+ K G    A+  F+ M+ +G   ++ TY  LI G C  G++
Sbjct: 502 KSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIV 561

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            LA+ +   M   G+QPNV  + +LI G C    +  A ++F EM+   ++P++  +  L
Sbjct: 562 ELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTAL 621

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  + GN +    L   M    I+ D+  Y +L+ G  + G+  +A     ++ +  +
Sbjct: 622 IDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGI 681

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           +P       L+     R   + A +L   M R
Sbjct: 682 LPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 2/224 (0%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ L   F + G L EAN  FS M+     P   + N L++   + GN ++    + +M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  GI   + TYN +I  LCKEG  + +  L   + +  L P+  TY++LI G     + 
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E    L+  M   GC P+   +  L++ +C+ E   RA E   EM    + P+ +  S L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPEN 556
                  G  + A+KL   M   GLLP  F     I  NC   N
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGN 385



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 98/210 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R   ++P++   +   Y    K  +A + F +M+D G    I +    +  L ++  V++
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVEL 563

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ ++  M    + PNV     ++   C    IE A ++F  M+  G  P +T +  LI 
Sbjct: 564 AVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+   G L  A+   + M +  I+ ++  + +L+ GF + G+LH+A + F+EM    + P
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILP 683

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             V    L+  Y + G  +    L  EM R
Sbjct: 684 EEVLCICLLREYYKRGQLDEAIELKNEMER 713


>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
           nodiflora]
          Length = 431

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 220/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++ F  ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCAMIHFLCSHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A D +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+ P+V T++ LI G CK+ K+ +AN++F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYNALI GLCK+G  K+A 
Sbjct: 243 LVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIDCYRLTREHKFCVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A ++F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P+++T+N LI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 TRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 238/467 (50%), Gaps = 19/467 (4%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKP----SSLTLETHSIVLHILTKNRKFKS 158
            L P  V  VL + + D  L   F   +  H P    +SL+L   S ++HIL ++ +   
Sbjct: 75  RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSL---SAMIHILVRSGRLSD 131

Query: 159 SES-ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++S +LR I  S    L  ++ +S+  ++  C S+  VFDLL +TY   +K R A + F 
Sbjct: 132 AQSCLLRMIRRSGVSRL--EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFT 189

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +R  GF   I++CN  + SL+    V++A G Y+E+ R+ +  NVYTLN++++A CK G
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E+       ++  G  P + TYNTLIS + +KGL+  A +  N M   G  P V T+N
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I G CK GK   A  +F+EM  + +SP+  TY +L+    + G+      ++ +M   
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++ +++++    + G   KA      + +  L+P+   Y+ LI G C +     A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M++ GC  +   +  ++   C+ +    A ++  EM E+ + PDS  L+ L  G
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489

Query: 518 LHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTINCAPE 555
               G  + AM+LF+KM+ + +         L  GF K+  I+ A E
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 187/381 (49%), Gaps = 28/381 (7%)

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP------- 226
           +P K F   +Y+Y          + +        K+  A + F +M   G  P       
Sbjct: 296 MPGKGFSPGVYTY----------NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345

Query: 227 -IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
            ++E+C K    ++++E+V      + +MR   + P++   + +M  F + G +++A+  
Sbjct: 346 LLMEACKK--GDVVETEKV------FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F +++  G IP    Y  LI G+C KG++S+AM  +N M + G   +V+T+NT++ G CK
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +  L EA+++F+EM    + P+  T   LI+G+ ++GN +    L+++M    I++D++T
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ G  K G    A  +  D+    ++P   +YS L+   C + +   AF+++  MI
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
               +P   I   ++  +C++ +       L +M+ +   PD I  + L  G        
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637

Query: 526 LAMKLFRKMEIR--GLLPKGF 544
            A  L +KME    GL+P  F
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVF 658



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 2/316 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L + Y  +     A +   +M   G    + + N  L  L   + +  A   + E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YTL +++   CKLG ++ A+E+F+ M+       V TYNTL+ G    G 
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M    I P  I+++ L+   C KG L EA R++ EM + N+ P V+  N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD--K 431
           +I GY + GN+  G S  E+M+  G   D ++YN LI G  +E    KA  LVK ++  +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+  TY++++ G C +   + A  + + MI  G  P++  +  +++ F   ++   
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710

Query: 492 AAEVLLEMLEKCMAPD 507
           A  +  EML++  +PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 145/286 (50%), Gaps = 2/286 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +      RK    A   F +M +    P   +    +        +  A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +++M+  RI  +V T N ++  F K+G I+ A E++ +M S   +P+  +Y+ L++  
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+KG L+ A +  + M    I+P V+  N++I G+C+ G   +      +M +    P+ 
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEML--RNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++YNTLI G+ +  N      L ++M   + G+  D+ TYN+++ G C++ + K+A  ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + + +  + P+ STY+ +I G   + N   AF+++  M++ G  P+
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score = 42.0 bits (97), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 26/106 (24%), Positives = 50/106 (47%)

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E A+ +Y+ + RSG   N +   ++++  C++   ++    L ++ EK + PD +  + L
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            S     G  E A +L   M  +G  P  +     IN   ++G+ E
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/514 (27%), Positives = 247/514 (48%), Gaps = 49/514 (9%)

Query: 83  NIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH---KPSSLT 139
           N  Y+ L    W+ L  ++      R  H         VL+L+F  WV      +P+ LT
Sbjct: 3   NSIYTILTIGRWESLNHMNYKFASLRPIH--------GVLALKFLKWVIKQPGLEPNHLT 54

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
                I  H+L K R +  ++SIL+ +   +S    + LF  ++ +Y +C S+P VFDLL
Sbjct: 55  -HILGITTHVLVKARLYGYAKSILKHLAQKNSGS--NFLFGVLMDTYPLCSSNPAVFDLL 111

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y  +    +A +TF  M   GF P + +CN  ++S++ + R  +   F+K+M  +R+
Sbjct: 112 IRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSRV 171

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            PNV + N+++   C  G +++AV +   ME  G++P++ +YNTL+S  C KG    A+ 
Sbjct: 172 CPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALV 231

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + ME  GIQ +V T+N  I   C+  +  +   +  +M+   ++PN V+YNTLING+ 
Sbjct: 232 LIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G   +   ++ EM+   +  +++TYN LI G C  G  ++A  ++  ++ N + PN  
Sbjct: 292 KEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEV 351

Query: 440 TYSALITG----------------QCVRKNS-------------------ERAFQLYKSM 464
           T   L+ G                 C+ + S                   + AFQL   M
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM 411

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
            + G  P+   F +L++ FC+  + ++A EV+ ++  +   P+++I S L       G  
Sbjct: 412 CKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNV 471

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             AMK +  M + G     F     +    ENG+
Sbjct: 472 YEAMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 170/398 (42%), Gaps = 37/398 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L      + K + A +    M   G++P I S N  LS      R   AL     M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I  +V T NM + + C+     +   V K M +    P+  +YNTLI+G   +G + 
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +A +  N M +  + PN+IT+N LI G+C  G   EA R+   M+A +V PN VT  TL+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPNEVTIGTLL 357

Query: 376 NGYGQVGNSEMGASLYE-----------------------------------EMLRNGIK 400
           NG  +    ++  ++ E                                   EM ++G+ 
Sbjct: 358 NGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVH 417

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+T++ LI G CK G   KA  ++  + +   VPN   +S LI   C   N   A + 
Sbjct: 418 PDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKF 477

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y +M  +G   +      L+++ C+N     A E L  +    + P+S+    + +G  +
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF--DKLRTINCAPEN 556
            G    A  +F +M   G  P  F    L  + C  +N
Sbjct: 538 VGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQN 575



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 164/362 (45%), Gaps = 35/362 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR+    P   S N  ++  +   ++ +A   + EM    +SPN+ T N++++ +C  G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTL--------------------------------- 304
             E A+ V   ME+    P+  T  TL                                 
Sbjct: 330 NFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHT 389

Query: 305 --ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
             I G C  GLL  A +    M K+G+ P++ITF+ LI GFCK G +++A  + S++   
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYRE 449

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN V ++TLI    +VGN       Y  M  NG   D  T N+L+  LC+ GK  +A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              +  + +  LVPN+ T+  +I G     +   AF ++  MI  G  P+   +  L+  
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKV 569

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+ ++F  A ++L ++    +A D+I  + L   +   G    A++LF +M    +LP 
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629

Query: 543 GF 544
            +
Sbjct: 630 SY 631



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A     EM ++ + P++ T +++++ FCK+G I +A EV   +   GF+P+   ++T
Sbjct: 401 LDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   C  G +  AMKF   M  NG   +  T N+L+   C+ GKL EA      +    
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT++ +INGY  VG+     S+++ M+  G      TY +L+  LCK     +A 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+K L    L  +  +Y+ LI       N   A +L++ MI++   P+ + +  ++S  
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 484 CQNEDFDRAAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +      A   L  +++K  +  +SI+ +    GL   G+ + A+ LF++ME +GL
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 3/348 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY-KEMRRNRISPNVYTLNMVM 270
           A   F +M     LP   +    LS L+   R+  A  F  + M++  ++ N       +
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
               K G  + A+ +FK ME  G    +   N++  G+   G +  A    +      + 
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+ TFN L+ G+ +   +    ++++ M+ +   PN +TY++LI G    G  E+G  +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +  +     +D LT+N LI   C+     K   L  +++   +  +  T  A+      
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           R  S+  F     M++ G  P    +  +M   C+  D   A ++  +M+   ++ D   
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP--KGFDKLRTINCAPEN 556
              +  GL  CGK E AM + ++M     +P    F  L  + C  +N
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDN 961



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 37/350 (10%)

Query: 227  IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            I+ +C  F+  L  + +   AL  +KEM    +S ++  LN +   + ++G +  A  + 
Sbjct: 667  IVYTC--FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLI 724

Query: 287  KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
                +   IP++TT+N L+ G+     +    K  NLM ++G  PN +T+++LI G C  
Sbjct: 725  SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNH 784

Query: 347  GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            G L    ++     A + + + +T+N LI    ++ + +    L   M    + +D  T 
Sbjct: 785  GMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQ 844

Query: 407  NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             A+   L +   ++     + ++ K   +P +  Y  ++   C   + + AF+L   M+ 
Sbjct: 845  KAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 467  SGCR-----------------------------------PNKHIFEMLMSTFCQNEDFDR 491
             G                                     P    F  LM  FC+ ++F  
Sbjct: 905  LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964

Query: 492  AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  + + M    +  D +  + L S     G    A+  + +++ +GLLP
Sbjct: 965  AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 35/287 (12%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            F++L   Y+  +   +    +  MR  GF P   + +  +  L +   +++ +   K   
Sbjct: 739  FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM----------------------- 292
                + +  T NM++   C++  +++ +++  NME                         
Sbjct: 799  AESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQ 858

Query: 293  ------------GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                        GFIP+   Y T++   C  G +  A K K+ M   GI  +      ++
Sbjct: 859  NYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMV 918

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             G    GK+ EA  I   M      P   T+ TL++ + +  N +   +L   M    +K
Sbjct: 919  RGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVK 978

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +DI+ YN LI   C  G    A    +++ +  L+PN +TY  L++ 
Sbjct: 979  LDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 227/448 (50%), Gaps = 6/448 (1%)

Query: 99  ALSTHLTPFRVKHVLLKV-QKDYVLS----LEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           +L   L  F+  H +  V Q  Y L     L FF ++ ++   S T++++  ++H L  +
Sbjct: 64  SLKNILPSFKAHHFISLVNQNPYFLPPKSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAH 123

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R  + +ES+L  ++        S +F SIL + +   SS  VFD L   Y       +A 
Sbjct: 124 RMNQQAESLLHFVVSRKGKGSASSVFASILET-KGTLSSSFVFDALMSVYTEFGYVSDAI 182

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F   + +        C   L  ++      +AL FY E+  +   PNVYT N++M+  
Sbjct: 183 QCFRLTKKHNLKIPFNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRL 242

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G ++ A  +F  +   G  P+  ++NTLI+G+C  G L    + K +ME+  + P+V
Sbjct: 243 CKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDV 302

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T++ LI G CK+ +L +AN +F EM    + PN VT+ TLING  + G  ++   +Y++
Sbjct: 303 FTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQ 362

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G+K D++ YN LI GLCK G  ++A   V ++ K  L+P+  TY+ L+ G C   +
Sbjct: 363 MFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGD 422

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E A ++ K M++ G + +   F  ++S  C++     A   L EML   + PD    + 
Sbjct: 423 LELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTM 482

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  G    G  ++  KL ++M+  G +P
Sbjct: 483 VMDGFCKKGDVKMGFKLLKEMQSDGHIP 510



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 167/332 (50%), Gaps = 2/332 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L        K ++A   F ++R  G  P   S N  ++    S  ++        M 
Sbjct: 235 FNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVME 294

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             R+ P+V+T + ++   CK   +E A  +FK M   G +P+  T+ TLI+G C  G + 
Sbjct: 295 EFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVD 354

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA++    M   G++ +++ +NTLI G CK G   EA +   EM    + P+  TY TL+
Sbjct: 355 LALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLL 414

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G+ E+   + +EM++ GI++D + + A+I GLC++GK   A   ++++ +  L 
Sbjct: 415 DGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLK 474

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ ++ G C + + +  F+L K M   G  P    + +LM+  C+      A  +
Sbjct: 475 PDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADML 534

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           L  ML   + PD I  + L  G  HC   +L 
Sbjct: 535 LNAMLNLGVVPDDITYNILLQG--HCKHGKLG 564



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M ++   P + + +  +  L    +++ A   +KEM    + PN  T   +++  CK G 
Sbjct: 293 MEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGR 352

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E+++ M + G    +  YNTLI G C  G    A KF   M K G+ P+  T+ T
Sbjct: 353 VDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTT 412

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK+G L  A  +  EM    +  + V +  +I+G  + G          EMLR G
Sbjct: 413 LLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAG 472

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +K D  TY  ++ G CK+G  K    L+K++  +  +P   TY+ L+ G C +   + A 
Sbjct: 473 LKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNAD 532

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            L  +M+  G  P+   + +L+   C++        V  EM
Sbjct: 533 MLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM 573



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 136/283 (48%), Gaps = 7/283 (2%)

Query: 282 AVEVFKN-MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN--- 337
           A  VF + +E+ G + S   ++ L+S +   G +S A++   L +K+ ++   I FN   
Sbjct: 145 ASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLK---IPFNGCK 201

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+    K      A   + E+  +   PNV T+N L+N   + G  +    +++E+ + 
Sbjct: 202 CLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKT 261

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++   +++N LI G CK G  ++   L   +++  + P+  TYSALI G C     E A
Sbjct: 262 GLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDA 321

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L+K M   G  PN   F  L++  C+N   D A E+  +M  K +  D ++ + L  G
Sbjct: 322 NHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDG 381

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           L   G    A K   +M  RGL+P  F     ++ + + G+ E
Sbjct: 382 LCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLE 424



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/264 (19%), Positives = 106/264 (40%), Gaps = 11/264 (4%)

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           F+ S  T++  +  +C+     +A +     E           + L F   +KGK   ++
Sbjct: 99  FLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAE-----------SLLHFVVSRKGKGSASS 147

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
              S ++      +   ++ L++ Y + G        +    ++ +K+       L+  +
Sbjct: 148 VFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERM 207

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            K      A     ++  +   PN  T++ L+   C     + A  ++  + ++G +P  
Sbjct: 208 IKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTA 267

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             F  L++ +C++ + +    + + M E  + PD    S L  GL    + E A  LF++
Sbjct: 268 VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE 327

Query: 534 MEIRGLLPKGFDKLRTINCAPENG 557
           M  RGL+P        IN   +NG
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNG 351


>gi|449445409|ref|XP_004140465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
 gi|449518107|ref|XP_004166085.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Cucumis sativus]
          Length = 578

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 244/463 (52%), Gaps = 8/463 (1%)

Query: 81  FVNIAYSHLIHSDWKKLTA--LSTHLTPFRVKHVLLKVQ---KDYVLSLEFFTWVQTHKP 135
            V   ++ ++   W  L    +S+ LT   +  +LL++        LS  FF WV+    
Sbjct: 4   LVQSMFAVVVKGHWNHLLKPKISSSLTSKSIHQILLRLSFYCSGPSLSWAFFKWVELIPD 63

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV 195
              +L++   ++ ILT+++ FK+++ +L  I   D    P  L ++++ SY   D +  +
Sbjct: 64  YKHSLQSSWAMIFILTEHKHFKTAQGLLEKIAHKDFISSPLVL-NALVTSYDNPDVNAHI 122

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
              L   Y + K  ++A      MR +GF P + +C   L+SL      D     YK+M 
Sbjct: 123 LSWLMIIYVNCKMPQDAIQVLEYMRLHGFKPNLHACTVLLNSLAKDRLTDTVWKSYKKMI 182

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + PN++  N+++HA CK G +E+A ++   ME     P + TYNTLIS +  K L  
Sbjct: 183 RVGVVPNIHIYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHY 242

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+  ++ ME+ G+ P+++T+N+LI+GFCK+GK+ EA ++F E+K  +VSPN VTY TLI
Sbjct: 243 EALCVQDRMERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIK--DVSPNHVTYTTLI 300

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY +V + E    L + M   G+ + + TYN+++  LC+EG+ + A  L+ ++ +  + 
Sbjct: 301 DGYCRVNDFEEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVE 360

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T + LI   C   + + A ++   M+ +G + +   ++ L+  FC   D + A E+
Sbjct: 361 PDNVTCNTLINAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKEL 420

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L  ML+  ++P     S L  G    G +   + L  +   +G
Sbjct: 421 LFCMLDVGLSPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKG 463



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 161/346 (46%), Gaps = 2/346 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L            A    C+M      P + + N  +S          AL     M
Sbjct: 192 IYNVLIHACCKSGDVEKAEQLVCEMELKSVFPDLYTYNTLISLYSRKSLHYEALCVQDRM 251

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R  +SP++ T N +++ FCK G +  AV++F+ ++ +   P+  TY TLI G+C     
Sbjct: 252 ERAGVSPDIVTYNSLIYGFCKEGKMREAVKLFREIKDVS--PNHVTYTTLIDGYCRVNDF 309

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++   +ME  G+   V T+N+++   C++G++ +AN++ +EM    V P+ VT NTL
Sbjct: 310 EEALRLCKVMEAKGLHLGVATYNSVLRKLCEEGRIRDANKLLNEMGERKVEPDNVTCNTL 369

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           IN Y ++G+ +    +  +ML  G+++D  TY ALI G C     + A  L+  +    L
Sbjct: 370 INAYCKIGDMKSALKVKSKMLDAGLQLDSFTYKALIHGFCWVRDMESAKELLFCMLDVGL 429

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P   TYS L+ G C   N      L    +  G   +  +   L+   C  E    A +
Sbjct: 430 SPGYCTYSWLVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEK 489

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +   M  + ++ DS+I + L       GK  L  ++  +M  R LL
Sbjct: 490 IYSTMHLRGVSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLL 535



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 22/171 (12%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           ++     FC +RD      +ES  + L  +LD                  +SP   T + 
Sbjct: 401 YKALIHGFCWVRD------MESAKELLFCMLDVG----------------LSPGYCTYSW 438

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++  +C+LG     + +     + G+   ++    LI   C++  +  A K  + M   G
Sbjct: 439 LVDGYCELGNEGAIISLLDEFLTKGYCVDLSVCRALIRRLCHQERVGFAEKIYSTMHLRG 498

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           +  + + + +L + + K GK +  + + SEM   ++  N+  Y      YG
Sbjct: 499 VSGDSVIYTSLAYAYWKDGKSNLVSEMLSEMTKRSLLINLKLYRCFNASYG 549


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 12/466 (2%)

Query: 100 LSTHLTPFRVKH---VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L  H + FR  H   VL+ ++ DY L L FF W +  +  SL  E   I++HI   +   
Sbjct: 93  LKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDWARVRREPSL--EARCIIIHIAVVSNDL 150

Query: 157 KSSESILRGILDSDSFDLPSKLFD---SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           + +  ++     +   ++  K+      ++Y+Y+    +P+ FD+ F+          A 
Sbjct: 151 RLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEAR 210

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLD-SERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
               ++  YG +  ++SCN FLS + + SE +++A+  + E     IS N  + N+++++
Sbjct: 211 KLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYS 267

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            C+LG ++ A  +   M+     P V +Y+T+I G+C+ G L  A+K  + M+  G++PN
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+N++I   CK GK  EA ++  EM +  + P+ V Y TLI+G+ ++G+       ++
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EML   I  D +TY  LI G  + GK  +   L  ++    L P+  TY+ LI   C   
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               AF L+  M++ G  PN   +  L+   C++ + D A E+L EM +K +  +  I +
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            + +G+   G  E A+KL ++ME+ G+ P        I+     G+
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 148/294 (50%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + EM    + P+  T   ++  +CK G +  A  +   M  MG  P++ TY  LI G C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A +  + M K G+Q NV  +N+++ G CK G + +A ++  EM+   + P+ +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY T+I+ Y ++G+ +    L +EML  G++  ++T+N L+ G C  G  +    L+  +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  +VP+A TY+ L+   C+R +     ++YK M   G  P+ + + +L+   C+  + 
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
             A  +  EM+EK   P     + L    +   K   A +LF +M   GL+  G
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADG 713



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 177/355 (49%), Gaps = 6/355 (1%)

Query: 191 SSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           S+P V  +  +   Y H  + + A      M+  G  P   + N  +  L    +   A 
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM   +I P+      ++H F KLG +  A + F  M S    P   TY TLI G 
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +       + M   G++P+ +T+ TLI  +CK G++  A  + +EM    ++PN+
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G  + G  +    L +EM + G+++++  YN+++ G+CK G  ++A  L+K+
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++   + P+A TY+ +I   C   + ++A +L + M+  G +P    F +LM+ FC    
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            +    +L  MLEK + PD+I  + L     HC ++ +    K++++M  +G+ P
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMK--QHCIRNSMNTTTKIYKRMRNQGVAP 641



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 151/330 (45%), Gaps = 2/330 (0%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
           P  LF  ++   R      + +  L   Y    +  NA     +M   G  P I +    
Sbjct: 417 PQNLFHEMIS--RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  L     +D A     EMR+  +  NV   N +++  CK G IE+A+++ K ME  G 
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P   TY T+I  +C  G +  A K    M   G+QP V+TFN L+ GFC  G L + +R
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +   M    + P+ +TYNTL+  +    +      +Y+ M   G+  D  TYN LI G C
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K    K+A +L K++ +   VP  ++Y+ALI     +K    A +L++ M   G   +  
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGE 714

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+   +    +  D +    +  E +EKC+
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 166/370 (44%), Gaps = 2/370 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G          +K FD +L   +      + +  L + +    K     + F +M 
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLS--KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   +    +     +  +  A   + EM +  ++PN+ T   ++   CK G ++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+   M   G   +V  YN++++G C  G +  A+K    ME  GI P+ IT+ T+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             +C+ G + +A+++  EM    + P VVT+N L+NG+  +G  E G  L   ML  GI 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D +TYN L+   C          + K +    + P+++TY+ LI G C  +N + A+ L
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           YK MI  G  P    +  L+  F + +    A E+  EM    +  D  I +      + 
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYE 725

Query: 521 CGKDELAMKL 530
            G  E+ + L
Sbjct: 726 EGDVEITLNL 735



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 4/300 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V  A  ++ EM   +ISP+  T   ++  F + G +     +F  M S G  P   TY T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI  +C  G +  A    N M + G+ PN++T+  LI G CK G+L  AN +  EM+   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +  NV  YN+++NG  + GN E    L +EM   GI  D +TY  +I   C+ G   KA 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++++    L P   T++ L+ G C+    E   +L   M+  G  P+   +  LM   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           C     +   ++   M  + +APDS   + L  G  HC    L  A  L+++M  +G +P
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG--HCKARNLKEAWFLYKEMIEKGYVP 676


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 235/466 (50%), Gaps = 12/466 (2%)

Query: 100 LSTHLTPFRVKH---VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L  H + FR  H   VL+ ++ DY L L FF W +  +  SL  E   I++HI   +   
Sbjct: 93  LKAHESNFRYDHLIWVLMNIKNDYNLVLAFFDWARVRREPSL--EARCIIIHIAVVSNDL 150

Query: 157 KSSESILRGILDSDSFDLPSKLFD---SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           + +  ++     +   ++  K+      ++Y+Y+    +P+ FD+ F+          A 
Sbjct: 151 RLAHELVHDYFLNSKLEIGVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEAR 210

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLD-SERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
               ++  YG +  ++SCN FLS + + SE +++A+  + E     IS N  + N+++++
Sbjct: 211 KLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYG---ISWNTTSYNIIIYS 267

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            C+LG ++ A  +   M+     P V +Y+T+I G+C+ G L  A+K  + M+  G++PN
Sbjct: 268 LCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPN 327

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+N++I   CK GK  EA ++  EM +  + P+ V Y TLI+G+ ++G+       ++
Sbjct: 328 RYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFD 387

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EML   I  D +TY  LI G  + GK  +   L  ++    L P+  TY+ LI   C   
Sbjct: 388 EMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAG 447

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               AF L+  M++ G  PN   +  L+   C++ + D A E+L EM +K +  +  I +
Sbjct: 448 EMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYN 507

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            + +G+   G  E A+KL ++ME+ G+ P        I+     G+
Sbjct: 508 SMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGD 553



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 148/294 (50%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + EM    + P+  T   ++  +CK G +  A  +   M  MG  P++ TY  LI G C
Sbjct: 420 LFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLC 479

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A +  + M K G+Q NV  +N+++ G CK G + +A ++  EM+   + P+ +
Sbjct: 480 KHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAI 539

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY T+I+ Y ++G+ +    L +EML  G++  ++T+N L+ G C  G  +    L+  +
Sbjct: 540 TYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM 599

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  +VP+A TY+ L+   C+R +     ++YK M   G  P+ + + +L+   C+  + 
Sbjct: 600 LEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNL 659

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
             A  +  EM+EK   P     + L    +   K   A +LF +M   GL+  G
Sbjct: 660 KEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADG 713



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 177/355 (49%), Gaps = 6/355 (1%)

Query: 191 SSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           S+P V  +  +   Y H  + + A      M+  G  P   + N  +  L    +   A 
Sbjct: 289 STPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAE 348

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM   +I P+      ++H F KLG +  A + F  M S    P   TY TLI G 
Sbjct: 349 KVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGF 408

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +       + M   G++P+ +T+ TLI  +CK G++  A  + +EM    ++PN+
Sbjct: 409 GQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNI 468

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G  + G  +    L +EM + G+++++  YN+++ G+CK G  ++A  L+K+
Sbjct: 469 VTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKE 528

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++   + P+A TY+ +I   C   + ++A +L + M+  G +P    F +LM+ FC    
Sbjct: 529 MEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGM 588

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            +    +L  MLEK + PD+I  + L     HC ++ +    K++++M  +G+ P
Sbjct: 589 LEDGDRLLGWMLEKGIVPDAITYNTLMK--QHCIRNSMNTTTKIYKRMRNQGVAP 641



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 166/370 (44%), Gaps = 2/370 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G          +K FD +L   +      + +  L + +    K     + F +M 
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLS--KKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   +    +     +  +  A   + EM +  ++PN+ T   ++   CK G ++
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+   M   G   +V  YN++++G C  G +  A+K    ME  GI P+ IT+ T+I
Sbjct: 486 TANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVI 545

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             +C+ G + +A+++  EM    + P VVT+N L+NG+  +G  E G  L   ML  GI 
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIV 605

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D +TYN L+   C          + K +    + P+++TY+ LI G C  +N + A+ L
Sbjct: 606 PDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFL 665

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           YK MI  G  P    +  L+  F +   F  A E+  EM    +  D  I +      + 
Sbjct: 666 YKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYE 725

Query: 521 CGKDELAMKL 530
            G  E+ + L
Sbjct: 726 EGDVEITLNL 735



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 151/330 (45%), Gaps = 2/330 (0%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
           P  LF  ++   R      + +  L   Y    +  NA     +M   G  P I +    
Sbjct: 417 PQNLFHEMIS--RGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  L     +D A     EMR+  +  NV   N +++  CK G IE+A+++ K ME  G 
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P   TY T+I  +C  G +  A K    M   G+QP V+TFN L+ GFC  G L + +R
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +   M    + P+ +TYNTL+  +    +      +Y+ M   G+  D  TYN LI G C
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K    K+A +L K++ +   VP  ++Y+ALI     ++    A +L++ M   G   +  
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGE 714

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+   +    +  D +    +  E +EKC+
Sbjct: 715 IYNFFVDMCYEEGDVEITLNLCDEAIEKCL 744



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 143/300 (47%), Gaps = 4/300 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V  A  ++ EM   +ISP+  T   ++  F + G +     +F  M S G  P   TY T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI  +C  G +  A    N M + G+ PN++T+  LI G CK G+L  AN +  EM+   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +  NV  YN+++NG  + GN E    L +EM   GI  D +TY  +I   C+ G   KA 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++++    L P   T++ L+ G C+    E   +L   M+  G  P+   +  LM   
Sbjct: 559 KLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQH 618

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           C     +   ++   M  + +APDS   + L  G  HC    L  A  L+++M  +G +P
Sbjct: 619 CIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKG--HCKARNLKEAWFLYKEMIEKGYVP 676


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/449 (30%), Positives = 231/449 (51%), Gaps = 2/449 (0%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
            D++ ++   + L P     VL+++ +D  L+L FF W +       T E + I++HIL 
Sbjct: 84  DDFRIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSEAYCILVHILF 143

Query: 152 KNRKFKSSESILRGILDSDSFDLPS-KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
             R +  + ++L+ ++      LPS  +FD +  +  +C     VFD LF          
Sbjct: 144 CARFYSDANAVLKELICLRRV-LPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLE 202

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A++ F +MR +   P   SCN  L  L    R D++  F+K+M    I  +V+T N+++
Sbjct: 203 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMI 262

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
              CK G +E A  +F  M+  GF P + TYN+LI GH   GLL   +     M+     
Sbjct: 263 DYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCD 322

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+VIT+N LI  FCK  ++ +A     EMKA  + PNVVTY+T I+ + + G  +     
Sbjct: 323 PDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKF 382

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           + +M R  +  +  TY +LI   CK G   +A  LV+++ +  +  N  TY+AL+ G C 
Sbjct: 383 FVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCE 442

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               + A +++++M+ +G  PN+  +  L+  F + ++ + A ++L EM EKC+ PD ++
Sbjct: 443 EGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLL 502

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              +  GL +  + E A  L  +++  G+
Sbjct: 503 YGTILWGLCNESRLEEAKLLIGEIKESGI 531



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 35/354 (9%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F QM+D    P + + N  ++     ER+  A  F  EM+ N + PNV T +  + AFCK
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+++ A++ F +M  +   P+  TY +LI  +C  G L+ A+K    + + GI+ NV+T
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  L+ G C++G++ EA  +F  M    V+PN  TY  L++G+ +    E    + +EM 
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA----------------- 438
              IK D+L Y  ++ GLC E + ++A  L+ ++ ++ +  NA                 
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 439 ------------------STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
                              TY ALI G C     + A   +  M   G +PN  ++  L+
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              C+N  F+ A ++  EML+K M PD I  + L  G    G  + A+ L  +M
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRM 666



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 35/388 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           CD   + ++ L   +   ++   A +   +M+  G  P + + + F+ +      +  A+
Sbjct: 321 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 380

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+ +MRR  ++PN +T   ++ A CK G +  A+++ + +   G   +V TY  L+ G 
Sbjct: 381 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 440

Query: 309 CNKGLLSLA--------------------------MKFKNL---------MEKNGIQPNV 333
           C +G +  A                          +K K +         M++  I+P++
Sbjct: 441 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 500

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + T+++G C + +L EA  +  E+K + ++ N V Y TL++ Y + G +    +L EE
Sbjct: 501 LLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEE 560

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ML  G+    +TY ALI GLCK G  ++A +    + +  L PN + Y+AL+ G C    
Sbjct: 561 MLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E A +L+  M+  G  P+K  +  L+    ++ +   A  +   M+E  M  D    + 
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  GL H G+ + A  L  +M  +G+LP
Sbjct: 681 LIWGLSHSGQVQKARNLLDEMIGKGVLP 708



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 18/331 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + T++ +L  L +  + K +E + R +L++     P++                  + 
Sbjct: 428 LNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV--APNQE----------------TYT 469

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L   +   K+   A D   +M++    P +      L  L +  R++ A     E++ +
Sbjct: 470 ALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 529

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I+ N      +M A+ K G    A+ + + M  +G I +  TY  LI G C  GL+  A
Sbjct: 530 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M     M + G+QPNV  +  L+ G CK      A ++F EM    + P+ + Y  LI+G
Sbjct: 590 MHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDG 649

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + GN +   +L + M+  G+++D+  Y ALI GL   G+ +KA  L+ ++    ++P+
Sbjct: 650 NMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPD 709

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
              Y  LI         + A +L   M + G
Sbjct: 710 EVVYMCLIKKYYALGKVDEALELQNEMAKRG 740



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/311 (24%), Positives = 133/311 (42%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L        + + A + F  M + G  P  E+    +   + ++ ++ A    KE
Sbjct: 431 VTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 490

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   I P++     ++   C    +E A  +   ++  G   +   Y TL+  +   G 
Sbjct: 491 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 550

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            + A+     M   G+    +T+  LI G CK G + EA   F  M    + PNV  Y  
Sbjct: 551 ATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTA 610

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  +    E+   L++EML  G+  D + Y ALI G  K G  ++A  L   + +  
Sbjct: 611 LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIG 670

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +   Y+ALI G       ++A  L   MI  G  P++ ++  L+  +      D A 
Sbjct: 671 MELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730

Query: 494 EVLLEMLEKCM 504
           E+  EM ++ M
Sbjct: 731 ELQNEMAKRGM 741



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 2/233 (0%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L     + G L EA+  F +M+   V P   + N L++   +VG  +
Sbjct: 178 RNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGD 237

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           +    +++M   GIK  + TYN +I  LCKEG  + A  L   + +    P+  TY++LI
Sbjct: 238 LSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       +    +++ M  + C P+   +  L++ FC+ E   +A E L EM    + 
Sbjct: 298 DGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLK 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPEN 556
           P+ +  S         G  + A+K F  M    L P  F     I  NC   N
Sbjct: 358 PNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 85/196 (43%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   +EM    +     T   ++   CK G+++ A+  F  M  +G  P+V  Y  L+ 
Sbjct: 554 ALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVD 613

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C      +A K  + M   G+ P+ I +  LI G  K G L EA  +   M    +  
Sbjct: 614 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 673

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++  Y  LI G    G  +   +L +EM+  G+  D + Y  LI      GK  +A  L 
Sbjct: 674 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 733

Query: 427 KDLDKNSLVPNASTYS 442
            ++ K  ++   S ++
Sbjct: 734 NEMAKRGMITGLSDHA 749



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 89/210 (42%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ +++  L   Y    +   A     +M D G +    +    +  L  S  V  A+ 
Sbjct: 532 NTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMH 591

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    + PNV     ++   CK    E A ++F  M   G +P    Y  LI G+ 
Sbjct: 592 HFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 651

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A+  ++ M + G++ ++  +  LI+G    G++ +A  +  EM    V P+ V
Sbjct: 652 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 711

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
            Y  LI  Y  +G  +    L  EM + G+
Sbjct: 712 VYMCLIKKYYALGKVDEALELQNEMAKRGM 741


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 234/468 (50%), Gaps = 7/468 (1%)

Query: 80  DFVNIAYSHLI-HSDWKKLTALSTHLTPFRVKHVLLKVQK-DYVLSLEFFTWVQTHKPSS 137
           DF  +  S LI    W  L +     +P    H L+     D +L L +F W +     +
Sbjct: 45  DFDPLIISDLISRQQWSILKSHVKFKSPIDFLHQLMGSGDVDPLLVLRYFNWSRRELNVN 104

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVF 196
            ++E    +L++L   + +    SIL   +  ++    S +F S+ + S + C +S ++ 
Sbjct: 105 YSIELICRLLNLLANAKHYPKIRSILDSFVKGETNCSISLIFHSLSVCSGQFCANS-IIA 163

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           D+L   Y    K     + F +  DY +   + SCN  LS+L+           YKEM R
Sbjct: 164 DMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIR 223

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            +ISPN+ T N V++  CK+G + +A +V  +M+  GF P+V TYNTLI G+C  G +  
Sbjct: 224 RKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGK 283

Query: 317 AMKFKNL---MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             K   +   M +N + PN +TFN LI GFCK   L  A ++F EM++  + P VVTYN+
Sbjct: 284 MYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNS 343

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+NG    G       L +EML + +K +++TYNALI G CK+   ++A  L  ++ K  
Sbjct: 344 LVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQG 403

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  T++ L+ G C     E AF L K M+  G  PN   +  L+  FC+    +   
Sbjct: 404 LTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVK 463

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L EM  + +  D++  + L S      + + A +L  +M  +GL P
Sbjct: 464 NLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKP 511



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 186/351 (52%), Gaps = 3/351 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI---ALGF 250
           + F+ +        K   A D    M+ +GF P + + N  +       RV     A   
Sbjct: 231 ITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAI 290

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            KEM  N++SPN  T N+++  FCK   +  A++VF+ M+S G  P+V TYN+L++G CN
Sbjct: 291 LKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCN 350

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G L+ A    + M  + ++PNVIT+N LI G+CKK  L EA  +F  +    ++PNV+T
Sbjct: 351 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +NTL++GY + G  E    L + ML  G   +  TYN LI+G C+EGK ++   L+ ++ 
Sbjct: 411 FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              +  +  TY+ LI+  C +K  ++A +L   M+  G +P+   + +L++ +C   +  
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 530

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  +  +M ++    + +  + L  G    GK E A  L  +M  +GL+P
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIP 581



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 164/330 (49%), Gaps = 18/330 (5%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D+IL        SP  + F++L   +   +    A   F +M+  G  P + + N  ++ 
Sbjct: 288 DAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNG 347

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L +  +++ A     EM  + + PNV T N +++ +CK  ++E A E+F N+   G  P+
Sbjct: 348 LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPN 407

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V T+NTL+ G+C  G +  A   + +M + G  PN  T+N LI GFC++GK+ E   + +
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM+   V  + VTYN LI+ + +    +  A L +EML  G+K   LTYN L+ G C EG
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             + A  L K ++K     N  TY+ LI G C +   E A  L   M+  G  PN+  +E
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           ++                  EM+EK   PD
Sbjct: 588 IIKE----------------EMMEKGFLPD 601


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 24/472 (5%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD 168
           V  VL  ++ +   SL FF +V   +     ++++  ++HIL++ R +  + + L  ++D
Sbjct: 71  VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 130

Query: 169 SDSF-DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
              F D  + ++D ++  YR    SP VFD++ K Y  +   +NA   F  M   G +P 
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + SCN  L++L+ +     A   Y++M R  I P+V+ ++++++AFCK G ++ A    K
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            ME++G  P++ TY++LI+G+ + G +  A      M + G+  NV+T+  LI G+CK+ 
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310

Query: 348 KLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           K+ EA ++   M+    + P+   Y  LI+GY + G  +    L +EMLR G+K ++   
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N+LI G CK G+  +A  ++  +   +L P++ +Y+ L+ G C   ++  AF L   M++
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  P    +  L+   C+   FD A ++   M+++ +APD +  S L  GL      E 
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 527 AMKLFRKMEIR--------------GLLPKG--------FDKLRTINCAPEN 556
           A  L++ +  R              GL   G        FDK++ + C+P+ 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 36/384 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIALGFYK 252
           + + LL K Y  + K   A      M++   L P   +    +     + ++D A+    
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM R  +  N++  N +++ +CK G I  A  V   M      P   +YNTL+ G+C +G
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 416

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             S A    + M + GI+P V+T+NTL+ G C+ G   +A +I+  M    V+P+ V Y+
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 476

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++G  ++ N E  ++L++++L  G     +T+N +I GLCK GK  +A  +   +   
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 433 SLVPNASTYSALITGQCVRKNSERAF---------------QLYKSMIRS---------- 467
              P+  TY  LI G C   N  +AF               ++Y S+I            
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 596

Query: 468 ----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                     G  PN   +  L+  +C+    D+A     EM E  ++ + II S + SG
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L+  G+ + A  L +KM   G  P
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFP 680



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 166/376 (44%), Gaps = 45/376 (11%)

Query: 209 FRNATDTFCQMRDYG-------------FLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +R   D +C+  + G               P IE  N  +S L  S R+        EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++PN+ T   ++  +CK G++++A   +  M   G   ++   +T++SG    G + 
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 316 LAMKFKNLMEKNG-----------------IQ---------------PNVITFNTLIFGF 343
            A      M  +G                 IQ               PN I +N  I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK GK+ +A R FS +      P+  TY TLI+GY   GN +    L +EMLR G+  +I
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYNALI GLCK     +A  L   L +  L PN  TY+ LI G C   N + AF+L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           MI  G  P+   +  L++  C++ D +R+ ++L +M++  +    I    L  G    G+
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904

Query: 524 DELAMKLFRKMEIRGL 539
            +   KL+  M IR L
Sbjct: 905 MQKIHKLYDMMHIRCL 920



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 191/480 (39%), Gaps = 84/480 (17%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           + K  S  + T+++++    K  K   +E +LRG+ +  +  +P +              
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL-VPDER------------- 333

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
               + +L   Y    K  +A     +M   G    +  CN  ++       +  A G  
Sbjct: 334 ---AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    + P+ Y+ N ++  +C+ G    A  +   M   G  P+V TYNTL+ G C  
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 312 GLLSLAMKFKNLMEKNGIQPNV-----------------------------------ITF 336
           G    A++  +LM K G+ P+                                    ITF
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NT+I G CK GK+ EA  IF +MK    SP+ +TY TLI+GY +  N      +   M R
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I   I  YN+LI GL K  +  +   L+ ++    L PN  TY ALI G C     ++
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML---------------- 500
           AF  Y  M  +G   N  I   ++S   +    D A  ++ +M+                
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 501 -------------EKC---MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                        E C   + P++I+ +   +GL   GK + A + F  + ++G +P  F
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 190/459 (41%), Gaps = 73/459 (15%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S++F+L  K+    +      + + L ++ L K       F +A   +  M   G  P  
Sbjct: 419 SEAFNLCDKMLQEGI------EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 472

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
              +  L  L   E  + A   +K++     + +  T N ++   CK+G +  A E+F  
Sbjct: 473 VGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDK 532

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+ +G  P   TY TLI G+C    +  A K K  ME+  I P++  +N+LI G  K  +
Sbjct: 533 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRR 592

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L E   + +EM    ++PN+VTY  LI+G+ + G  +   S Y EM  NG+  +I+  + 
Sbjct: 593 LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 409 LILGLCKEGKTKKAAYLVK-----------------------------DLD---KNSLVP 436
           ++ GL + G+  +A  L++                              LD   K  L+P
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 712

Query: 437 NASTYSALITGQC-----------------------------------VRKNSERAFQLY 461
           N   Y+  I G C                                      N + AF+L 
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R G  PN   +  L++  C++E+ DRA  +  ++ +K + P+ +  + L  G    
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           G  + A KL  KM   G+ P        IN   ++G+ E
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 183/432 (42%), Gaps = 34/432 (7%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+   ++F+  S L+  IL   R    S + F+ +        K   A + F +M+
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILA--RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   +    +     +  V  A      M R  ISP++   N ++    K   + 
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLV 594

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++   M   G  P++ TY  LI G C +G+L  A      M +NG+  N+I  +T++
Sbjct: 595 EVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 341 FGFCKKGKLHEANRIFSEMK--------------------------------ATNVSPNV 368
            G  + G++ EAN +  +M                                  T + PN 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + YN  I G  + G  +     +  +   G   D  TY  LI G    G   +A  L  +
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  LVPN  TY+ALI G C  +N +RA +L+  + + G  PN   +  L+  +C+  +
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            D A ++  +M+E+ ++P  +  S L +GL   G  E +MKL  +M   G+  K  +   
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 549 TINCAPENGEKE 560
            +     +GE +
Sbjct: 895 LVQGYIRSGEMQ 906



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 85/157 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P I + N  ++ L  SE VD A   + ++ +  + PNV T N ++  +CK+G
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A ++   M   G  PSV TY+ LI+G C  G +  +MK  N M K G+   +I + 
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           TL+ G+ + G++ + ++++  M    +S   +++  +
Sbjct: 894 TLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 55/131 (41%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L       +    A   F ++   G  P + + N  +        +D A     +
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ISP+V T + +++  CK G IER++++   M   G    +  Y TL+ G+   G 
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904

Query: 314 LSLAMKFKNLM 324
           +    K  ++M
Sbjct: 905 MQKIHKLYDMM 915


>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           montevidensis]
          Length = 431

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 219/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +I 
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIF 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +  ++  L+S  
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   I+ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++   ++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 113/225 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G L  A      M   N   + V Y  LI+G  + G S     +  EML  G+K D
Sbjct: 327 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 109/217 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M   G  P   TY TLI G C  G L 
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +   + + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 335 TAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 143/433 (33%), Positives = 222/433 (51%), Gaps = 5/433 (1%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           LL    D  L L +FTW Q     S +LE    +L+ L   +K+    S L   +  +  
Sbjct: 5   LLNSGADPELILRYFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKD 64

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
              S +F +I  S      + ++ D+L   +    K     + F +  DYGF   + SCN
Sbjct: 65  YSVSAIFHAISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCN 124

Query: 233 KFLSSLL-DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
             LS L+ +SE  D+    Y+EM + +I  NV + N+V++  CK+G + RA +V ++M+ 
Sbjct: 125 PLLSGLVKESENGDMEF-VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKGK 348
            G  P+V TYNTLI G+C  G +    K   ++++    GI PN +T+N LI GFCK   
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A R+F EM+   + PNVVTYN LING    G  +   +L ++M+ + ++ +++T+N 
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G CK     +A  L  D++K  + PNA TY+ LI   C     E AF LY  MI  G
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P    +  L++  C+  D   A  ++ EM+ K ++ D +  + L   L   G+   A+
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423

Query: 529 KLFRKMEIRGLLP 541
           KL  +M  +GL P
Sbjct: 424 KLLDEMFEKGLNP 436



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 175/358 (48%), Gaps = 3/358 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + F+++        K   A D    M+ +G  P + + N  +       R+  
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGK 208

Query: 247 ---ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A    KEM    I PN  T N+++  FCK   +  A+ VF  M+  G  P+V TYN 
Sbjct: 209 MYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNI 268

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G C+ G +  A+  ++ M  + ++PNV+T N LI GFCK   ++EA  +F++M+   
Sbjct: 269 LINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQG 328

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN +TY TLI+ Y + G  E   +LY  M+  GI  ++ TYN LI GLC++G  K A 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L  +  TY+ LI   C +  S +A +L   M   G  P+   +  LM  +
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  +   A  V   M  K    + +  + L  G    G+ E A  L  +M  RGL+P
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVP 506



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 155/300 (51%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A     +M   G  P   + N  +      E V  A+  + EM+R  + PNV T N
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  C  G ++ AV +   M S    P+V T+N LI+G C    ++ A+   N MEK 
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ PN +T+ TLI  +CK G++ +A  +++ M    + P V TYN LI G  + G+ +  
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            SL  EM+   +  D++TYN LI  LCK+G+++KA  L+ ++ +  L P+  TY+ L+ G
Sbjct: 388 RSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDG 447

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C   N   A  +   M R G + N     +L+  FC     + A  +L EMLE+ + P+
Sbjct: 448 YCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPN 507



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 154/316 (48%), Gaps = 16/316 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + +++L   +   +    A   F +M+  G  P + + N  ++ L    +VD A+   
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M  + + PNV T N++++ FCK   +  A+ +F +ME  G  P+  TY TLI  +C  
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A    N+M   GI P V T+N LI G C+KG +  A  + +EM +  +S +VVTY
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI+   + G S     L +EM   G+    +TYN L+ G C+EG  + A  +   +++
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
                N  T++ LI G C++   E A  L   M+  G  PN+  +E++            
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKE---------- 516

Query: 492 AAEVLLEMLEKCMAPD 507
                 EM+EK   PD
Sbjct: 517 ------EMMEKGFVPD 526



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 149/292 (51%), Gaps = 13/292 (4%)

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG---HCNKGLLSLAMKFKNL 323
           +M++ AF +   I R  E FK     GF  S+ + N L+SG       G +    +    
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYR---E 145

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY---GQ 380
           M K  I+ NVI+FN ++ G CK GKL+ A  +  +MK   VSPNV+TYNTLI+GY   G+
Sbjct: 146 MIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGR 205

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +G      ++ +EM+  GI  + +TYN LI G CK+     A  +  ++ +  L PN  T
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ LI G C     + A  L   M+ S   PN     +L++ FC+N+  + A  +  +M 
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           ++ + P+++  + L       G+ E A  L+  M  RG+ P    ++ T NC
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFP----EVSTYNC 373



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 94/185 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D + + +  L   Y    +  +A   +  M D G  P + + N  ++ L     V  A  
Sbjct: 330 DPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARS 389

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM   ++S +V T N+++ + CK G   +AV++   M   G  PS  TYNTL+ G+C
Sbjct: 390 LMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYC 449

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A+  +  ME+ G Q NV+T N LI GFC KG+L +AN + +EM    + PN  
Sbjct: 450 REGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRT 509

Query: 370 TYNTL 374
           TY  +
Sbjct: 510 TYEII 514


>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
          Length = 418

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 220/409 (53%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL T+  ++H L  ++    ++S+++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHTYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   R++      ++C K L  L+  +   +  GFYKE+    
Sbjct: 72  LINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF ++   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K KN M  +G+QP+V T++ LI G CK+ K++EAN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 KLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +     Y++ML      D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+L ++M++   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + PD    ++I++E       C K+++  A KL ++M+ +G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEF------CKKEDVKTAAKLLKEMQRQGHVP 414



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 128/302 (42%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + +++A+ + G +  A+E F+   E    +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E+       ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YKEILECGYPASLYFFNILMHRFCK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  + G   +   L   +  + + P+  T
Sbjct: 149 EGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C       A  L+  M+  G  PN   F  L+   C+N   D A E   +ML
Sbjct: 209 YSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            +C  PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ +
Sbjct: 269 SQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLD 328

Query: 561 SG 562
           S 
Sbjct: 329 SA 330



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 77/177 (43%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    K  +A +T+ QM    FLP + + N  +  L     +  A     E
Sbjct: 242 VTFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDE 301

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+  T   ++   CK G ++ A E+ + M           Y  LISG C +G 
Sbjct: 302 MRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGR 361

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            + A K    M   G++P+  T+  +I  FCKK  +  A ++  EM+     P VVT
Sbjct: 362 ATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418


>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           aristata]
          Length = 431

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 218/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL  +  ++H L  ++    ++S+++ ++        S +F +I 
Sbjct: 3   FFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R ++  +  L+S  
Sbjct: 303 HLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVP 420



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 ARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMN 430



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  +I
Sbjct: 335 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 394

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + +  ++  EM+     P+VVTYN L+NG
Sbjct: 395 NEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431


>gi|356555026|ref|XP_003545840.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Glycine max]
          Length = 587

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/447 (29%), Positives = 236/447 (52%), Gaps = 8/447 (1%)

Query: 76  GQDLDFVNIAYSHLIHSDWKKLTAL--STHLTPFRVKHVLLKVQ-KDYVLS--LEFFTWV 130
           G    FV+   S ++   W  L  +  ++ LT   +  VLL++    Y LS    FF W+
Sbjct: 5   GSHNQFVDSVCSIVVKGHWGNLLKVKNASALTSSTIHKVLLQLSLYGYGLSHSFPFFKWL 64

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
            +    S +L+    ++HILT+++ FK+++ +L  I   D    PS L  +++ ++   +
Sbjct: 65  DSIPHYSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVL-STLVRTHDNQE 123

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
            +  V   L   YA  K  ++A   F QMR +   P + +C   L+SLL      +    
Sbjct: 124 VNSQVLSWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKI 183

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           YK M +  + PN+Y  N + HA  K G +ERA ++   M+  G +  + TYNTL+S +C 
Sbjct: 184 YKRMVQVGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCK 243

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG+   A+  +N ME+ GI  +++++N+LI+GFCK+G++ EA R+FSE+K  N +PN VT
Sbjct: 244 KGMHYEALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIK--NATPNHVT 301

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+GY +    E    + + M   G+   ++TYN+++  LC++G+ + A  L+ ++ 
Sbjct: 302 YTTLIDGYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMS 361

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  L  +  T + LI   C   + + A +    M+ +G +P+   ++ L+  FC+  + +
Sbjct: 362 ERKLQADNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELE 421

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSG 517
            A E++  ML+    P     S +  G
Sbjct: 422 SAKELMFSMLDAGFTPSYCTYSWIVDG 448



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 211/474 (44%), Gaps = 21/474 (4%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKV-QKDYVLSLEFF-TWVQTHKPSSLTLETH 143
           YSH +   W  +  L+ H      +HVL K+  KD++ S     T V+TH    +  +  
Sbjct: 70  YSHSLQCSWAMIHILTEHKHFKTAQHVLEKIAHKDFLSSPSVLSTLVRTHDNQEVNSQVL 129

Query: 144 SIVLHILTKNRKFKSSESILRGI--------LDSDSFDLPSKLFDSILYSY-----RMCD 190
           S ++    K++  + +  +   +        L + +  L S L D + +       RM  
Sbjct: 130 SWLVIHYAKSKMTQDAIQVFEQMRLHEVKPHLHACTVLLNSLLKDGVTHMVWKIYKRMVQ 189

Query: 191 SSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
              +    +++ LF   +       A     +M   G L  I + N  LS          
Sbjct: 190 VGVVPNIYIYNCLFHACSKSGDVERAEQLLNEMDVKGVLQDIFTYNTLLSLYCKKGMHYE 249

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL     M R  I+ ++ + N +++ FCK G +  A+ +F  +++    P+  TY TLI 
Sbjct: 250 ALSIQNRMEREGINLDIVSYNSLIYGFCKEGRMREAMRMFSEIKNA--TPNHVTYTTLID 307

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    L  A+K   LME  G+ P V+T+N+++   C+ G++ +AN++ +EM    +  
Sbjct: 308 GYCKTNELEEALKMCKLMEAKGLYPGVVTYNSILRKLCQDGRIRDANKLLNEMSERKLQA 367

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +T NTLIN Y ++G+ +       +ML  G+K D  TY ALI G CK  + + A  L+
Sbjct: 368 DNITCNTLINAYCKIGDLKSALKFKNKMLEAGLKPDPFTYKALIHGFCKTNELESAKELM 427

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +      P+  TYS ++ G   + N +    L    +  G   +  ++  L+ + C+ 
Sbjct: 428 FSMLDAGFTPSYCTYSWIVDGYNKKDNMDAVLALPDEFLSRGICLDVSVYRALIRSSCKV 487

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           E    A  +   M  K ++ +S+I + +     + G    A  +  +M  R L+
Sbjct: 488 ERIQCAERLFYHMEGKGISGESVIYTSIAYAYWNVGNVSAASSMLEEMARRRLM 541



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 98/228 (42%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + +      + R+A     +M +        +CN  +++      +  AL F  +
Sbjct: 335 VTYNSILRKLCQDGRIRDANKLLNEMSERKLQADNITCNTLINAYCKIGDLKSALKFKNK 394

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H FCK   +E A E+  +M   GF PS  TY+ ++ G+  K  
Sbjct: 395 MLEAGLKPDPFTYKALIHGFCKTNELESAKELMFSMLDAGFTPSYCTYSWIVDGYNKKDN 454

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +   +   +     GI  +V  +  LI   CK  ++  A R+F  M+   +S   V Y +
Sbjct: 455 MDAVLALPDEFLSRGICLDVSVYRALIRSSCKVERIQCAERLFYHMEGKGISGESVIYTS 514

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +   Y  VGN    +S+ EEM R  + + +  Y         E K  +
Sbjct: 515 IAYAYWNVGNVSAASSMLEEMARRRLMITVKLYRCFSTSDANENKVSQ 562


>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
          Length = 418

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 210/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ I+     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   R++ F    ++C K L  L+  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G+L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M  +G QP+V T++ LI G CK+ K+ EA+ +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y+++L  G+  D++TYN LI G CK+G  K+   L+ ++    L P+ 
Sbjct: 252 CKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI    R +  ++  L+S  C+      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PDS   + + +     G      KL ++M+  G +P
Sbjct: 372 MLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVP 414



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 148/282 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L   +    + R A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M  +   P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L LAM+    +   G+ P++IT+NTLI+GFCKKG L +   +  EM    + P+ +T
Sbjct: 254 NGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      ++M+   I++D + Y ALI GLCKEG++  A  +++++ 
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P++ TY+ ++   C   +     +L K M R G  P+
Sbjct: 374 SVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPS 415



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 110/222 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 197 MHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGK 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K + S G  P + TYNTLI G C KG L       + M   G++P+ IT+ T
Sbjct: 257 LDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A     +M   N+  + V Y  LI+G  + G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K D  TY  ++   CK G     + L+K++ ++  VP+  T
Sbjct: 377 LKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 243/472 (51%), Gaps = 24/472 (5%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD 168
           V  VL  ++ +   SL FF +V   +     ++++  ++HIL++ R +  + + L  ++D
Sbjct: 37  VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 96

Query: 169 SDSF-DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
              F D  + ++D ++  YR    SP VFD++ K Y  +   +NA   F  M   G +P 
Sbjct: 97  LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 156

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + SCN  L++L+ +     A   Y++M R  I P+V+ ++++++AFCK G ++ A    K
Sbjct: 157 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 216

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            ME++G  P++ TY++LI+G+ + G +  A      M + G+  NV+T+  LI G+CK+ 
Sbjct: 217 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 276

Query: 348 KLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           K+ EA ++   M+    + P+   Y  LI+GY + G  +    L +EMLR G+K ++   
Sbjct: 277 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 336

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N+LI G CK G+  +A  ++  +   +L P++ +Y+ L+ G C   ++  AF L   M++
Sbjct: 337 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 396

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  P    +  L+   C+   FD A ++   M+++ +APD +  S L  GL      E 
Sbjct: 397 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 456

Query: 527 AMKLFRKMEIR--------------GLLPKG--------FDKLRTINCAPEN 556
           A  L++ +  R              GL   G        FDK++ + C+P+ 
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 508



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 175/384 (45%), Gaps = 36/384 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           + + LL K Y  + K   A      M++    +P   +    +     + ++D A+    
Sbjct: 263 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 322

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM R  +  N++  N +++ +CK G I  A  V   M      P   +YNTL+ G+C +G
Sbjct: 323 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 382

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             S A    + M + GI+P V+T+NTL+ G C+ G   +A +I+  M    V+P+ V Y+
Sbjct: 383 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYS 442

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++G  ++ N E  ++L++++L  G     +T+N +I GLCK GK  +A  +   +   
Sbjct: 443 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 502

Query: 433 SLVPNASTYSALITGQCVRKNSERAF---------------QLYKSMIRS---------- 467
              P+  TY  LI G C   N  +AF               ++Y S+I            
Sbjct: 503 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEV 562

Query: 468 ----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                     G  PN   +  L+  +C+    D+A     EM E  ++ + II S + SG
Sbjct: 563 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 622

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L+  G+ + A  L +KM   G  P
Sbjct: 623 LYRLGRIDEANLLMQKMVDHGFFP 646



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 182/440 (41%), Gaps = 73/440 (16%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S++F+L  K+    +      + + L ++ L K       F +A   +  M   G  P  
Sbjct: 385 SEAFNLCDKMLQEGI------EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDE 438

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
              +  L  L   E  + A   +K++     + +  T N ++   CK+G +  A E+F  
Sbjct: 439 VGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDK 498

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN--------------------- 327
           M+ +G  P   TY TLI G+C    +  A K K  ME+                      
Sbjct: 499 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRR 558

Query: 328 --------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                         G+ PN++T+  LI G+CK+G L +A   + EM    +S N++  +T
Sbjct: 559 LVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 618

Query: 374 LINGYGQVGNSEMGASLYEEMLRNG--------IKVDI---------------------- 403
           +++G  ++G  +    L ++M+ +G        +K DI                      
Sbjct: 619 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 678

Query: 404 --LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
             + YN  I GLCK GK   A      L     VP+  TY  LI G     N + AF+L 
Sbjct: 679 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 738

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R G  PN   +  L++  C++E+ DRA  +  ++ +K + P+ +  + L  G    
Sbjct: 739 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 798

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A KL  KM   G+ P
Sbjct: 799 GNMDAAFKLKDKMIEEGISP 818



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 191/480 (39%), Gaps = 84/480 (17%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           + K  S  + T+++++    K  K   +E +LRG+ +  +  +P +              
Sbjct: 254 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL-VPDER------------- 299

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
               + +L   Y    K  +A     +M   G    +  CN  ++       +  A G  
Sbjct: 300 ---AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    + P+ Y+ N ++  +C+ G    A  +   M   G  P+V TYNTL+ G C  
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 312 GLLSLAMKFKNLMEKNGIQPNV-----------------------------------ITF 336
           G    A++  +LM K G+ P+                                    ITF
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NT+I G CK GK+ EA  IF +MK    SP+ +TY TLI+GY +  N      +   M R
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I   I  YN+LI GL K  +  +   L+ ++    L PN  TY ALI G C     ++
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML---------------- 500
           AF  Y  M  +G   N  I   ++S   +    D A  ++ +M+                
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 656

Query: 501 -------------EKC---MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                        E C   + P++I+ +   +GL   GK + A + F  + ++G +P  F
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 134/309 (43%), Gaps = 45/309 (14%)

Query: 209 FRNATDTFCQMRDYG-------------FLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +R   D +C+  + G               P IE  N  +S L  S R+        EM 
Sbjct: 511 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 570

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++PN+ T   ++  +CK G++++A   +  M   G   ++   +T++SG    G + 
Sbjct: 571 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 630

Query: 316 LAMKFKNLMEKNG-----------------IQ---------------PNVITFNTLIFGF 343
            A      M  +G                 IQ               PN I +N  I G 
Sbjct: 631 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 690

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK GK+ +A R FS +      P+  TY TLI+GY   GN +    L +EMLR G+  +I
Sbjct: 691 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYNALI GLCK     +A  L   L +  L PN  TY+ LI G C   N + AF+L   
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810

Query: 464 MIRSGCRPN 472
           MI  G  P+
Sbjct: 811 MIEEGISPS 819



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 96/186 (51%), Gaps = 3/186 (1%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D+GF P  E    FL S +    +        E  +  + PN    N+ +   CK G
Sbjct: 638 KMVDHGFFPDHEC---FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 694

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A   F  +   GF+P   TY TLI G+   G +  A + ++ M + G+ PN++T+N
Sbjct: 695 KVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 754

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK   +  A R+F ++    + PNVVTYNTLI+GY ++GN +    L ++M+  
Sbjct: 755 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814

Query: 398 GIKVDI 403
           GI   I
Sbjct: 815 GISPSI 820


>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
           ovatifolia]
          Length = 418

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 213/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H+L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K  M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLC++G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   + +   +  L+S  CQ   +  A +VL E
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+I  + + +     G      KL ++M+  G +P
Sbjct: 372 MLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMP 414



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 166/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 85  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 141 ILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G C+KG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG+   A  +++++    L P+
Sbjct: 321 XCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPD 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 TITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPS 415



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G       +  EML  G
Sbjct: 317 LIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K D +TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 377 LKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 109/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M D G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  C+ G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  IQ + + +  LI G C++G+  +A ++  EM +  + P+ +TY  +I
Sbjct: 329 TAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 221/431 (51%), Gaps = 4/431 (0%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSES-ILRGILDSD 170
           L K +++  L   F   + ++ P+   +L++ S ++HIL ++R+   +++ ILR +  S 
Sbjct: 208 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG 267

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
              +  ++ +S++ +Y  C S+PLVFDLL +TY   +K R   + F  ++  G    I +
Sbjct: 268 VSRV--EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 325

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  L  L+    VD+A   Y+E+ R+ +  NVYTLN++++A CK   IE       +ME
Sbjct: 326 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 385

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P V TYNTLI+ +C +GLL  A +  + M   G++P V T+N +I G CK GK  
Sbjct: 386 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 445

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +  EM    +SP+  TYN L+    +  N      +++EM   G+  D+++++ALI
Sbjct: 446 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 505

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L K G   +A    +D+    L P+   Y+ LI G C       A ++   M+  GC 
Sbjct: 506 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCX 565

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +   +  +++  C+ +    A E+  EM E+ + PD    + L +G    G    A+ L
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTL 625

Query: 531 FRKMEIRGLLP 541
           F  M  R L P
Sbjct: 626 FEMMIQRNLKP 636



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 211/427 (49%), Gaps = 37/427 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSF-DLPSKLFDSILYSY----------RMCD 190
           T +I+++ L KN+K ++++S L  + +   F D+ +  +++++ +Y           + D
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT--YNTLINAYCRQGLLEEAFELMD 417

Query: 191 S------SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLP--------IIESCNKF 234
           S       P VF  + +        K+  A     +M   G  P        ++E C   
Sbjct: 418 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN- 476

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
             +++D+ER+      + EM    + P++ + + ++    K G +++A++ F++M++ G 
Sbjct: 477 -DNMMDAERI------FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 529

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P    Y  LI G C  G++S A+K ++ M + G   +V+T+NT++ G CK+  L EA+ 
Sbjct: 530 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADE 589

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F+EM    V P+  T+ TLINGY + GN     +L+E M++  +K D++TYN LI G C
Sbjct: 590 LFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 649

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K  + +K   L  D+    + PN  +Y  LI G C       AF+L+  M+  G      
Sbjct: 650 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 709

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               ++  +C+  +  +A E L  ML K + PD I  + L +G       + A  L  KM
Sbjct: 710 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769

Query: 535 EIRGLLP 541
           E  GLLP
Sbjct: 770 ENSGLLP 776



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 199/418 (47%), Gaps = 41/418 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  +  +     + D +L      D++   +++L           +A   F +M 
Sbjct: 433 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA--TYNILLVECCRNDNMMDAERIFDEMP 490

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN------------------ 262
             G +P + S +  +  L  +  +D AL ++++M+   ++P+                  
Sbjct: 491 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 550

Query: 263 -----------------VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                            V T N +++  CK  ++  A E+F  M   G  P   T+ TLI
Sbjct: 551 EALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 610

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G+   G ++ A+    +M +  ++P+V+T+NTLI GFCK  ++ + N ++++M +  + 
Sbjct: 611 NGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 670

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN ++Y  LINGY  +G       L++EM+  G +  I+T N ++ G C+ G   KA   
Sbjct: 671 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 730

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    +VP+  TY+ LI G    +N +RAF L   M  SG  P+   + ++++ F +
Sbjct: 731 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 790

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
                 A  ++L+M+E+ + PD    + L +G  H  ++ L  A ++  +M  RG +P
Sbjct: 791 QGRMQEAELIMLKMIERGVNPDRSTYTSLING--HVTQNNLKEAFRVHDEMLQRGFVP 846



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 151/284 (53%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +       K    A + F +M + G  P   +    ++       ++ A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++ M +  + P+V T N ++  FCK   +E+  E++ +M S    P+  +Y  LI+G+
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN G +S A +  + M + G +  +IT NT++ G+C+ G   +A+   S M    + P+ 
Sbjct: 684 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 743

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLING+ +  N +   +L  +M  +G+  D++TYN ++ G  ++G+ ++A  ++  
Sbjct: 744 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 803

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +  + P+ STY++LI G   + N + AF+++  M++ G  P+
Sbjct: 804 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 144/314 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +        A     +M + G    + + N  L+ L   + +  A   + E
Sbjct: 534 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YT   +++ + K G + +AV +F+ M      P V TYNTLI G C    
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +    +  N M    I PN I++  LI G+C  G + EA R++ EM        ++T NT
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ GY + GN+         ML  GI  D +TYN LI G  KE    +A  LV  ++ + 
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TY+ ++ G   +   + A  +   MI  G  P++  +  L++      +   A 
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 833

Query: 494 EVLLEMLEKCMAPD 507
            V  EML++   PD
Sbjct: 834 RVHDEMLQRGFVPD 847



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/247 (19%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 314 LSLAMKFKNLMEKN--GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           L L  +F + +  N    + ++ +F+ +I    +  +L +A  +   M   +    V   
Sbjct: 215 LQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIV 274

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            +L+  YG  G++                   L ++ L+    +  K ++     + L  
Sbjct: 275 ESLVLTYGNCGSNP------------------LVFDLLVRTYVQARKLREGCEAFRVLKS 316

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L  + +  ++L+ G       + A+++Y+ ++RSG + N +   ++++  C+N+  + 
Sbjct: 317 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 376

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
               L +M EK + PD +  + L +     G  E A +L   M  +GL P  F     IN
Sbjct: 377 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 436

Query: 552 CAPENGE 558
              + G+
Sbjct: 437 GLCKTGK 443


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 221/431 (51%), Gaps = 4/431 (0%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSES-ILRGILDSD 170
           L K +++  L   F   + ++ P+   +L++ S ++HIL ++R+   +++ ILR +  S 
Sbjct: 104 LYKCRENLQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSG 163

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
              +  ++ +S++ +Y  C S+PLVFDLL +TY   +K R   + F  ++  G    I +
Sbjct: 164 VSRV--EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 221

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  L  L+    VD+A   Y+E+ R+ +  NVYTLN++++A CK   IE       +ME
Sbjct: 222 CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 281

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P V TYNTLI+ +C +GLL  A +  + M   G++P V T+N +I G CK GK  
Sbjct: 282 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 341

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +  EM    +SP+  TYN L+    +  N      +++EM   G+  D+++++ALI
Sbjct: 342 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L K G   +A    +D+    L P+   Y+ LI G C       A ++   M+  GC 
Sbjct: 402 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 461

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +   +  +++  C+ +    A E+  EM E+ + PD    + L +G    G    A+ L
Sbjct: 462 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 521

Query: 531 FRKMEIRGLLP 541
           F  M  R L P
Sbjct: 522 FEMMIQRNLKP 532



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 211/427 (49%), Gaps = 37/427 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSF-DLPSKLFDSILYSY----------RMCD 190
           T +I+++ L KN+K ++++S L  + +   F D+ +  +++++ +Y           + D
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT--YNTLINAYCRQGLLEEAFELMD 313

Query: 191 S------SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLP--------IIESCNKF 234
           S       P VF  + +        K+  A     +M   G  P        ++E C   
Sbjct: 314 SMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN- 372

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
             +++D+ER+      + EM    + P++ + + ++    K G +++A++ F++M++ G 
Sbjct: 373 -DNMMDAERI------FDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGL 425

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P    Y  LI G C  G++S A+K ++ M + G   +V+T+NT++ G CK+  L EA+ 
Sbjct: 426 APDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADE 485

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F+EM    V P+  T+ TLINGY + GN     +L+E M++  +K D++TYN LI G C
Sbjct: 486 LFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFC 545

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K  + +K   L  D+    + PN  +Y  LI G C       AF+L+  M+  G      
Sbjct: 546 KGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATII 605

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               ++  +C+  +  +A E L  ML K + PD I  + L +G       + A  L  KM
Sbjct: 606 TCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665

Query: 535 EIRGLLP 541
           E  GLLP
Sbjct: 666 ENSGLLP 672



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 201/418 (48%), Gaps = 41/418 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  +  +     + D +L      D++   +++L           +A   F +M 
Sbjct: 329 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA--TYNILLVECCRNDNMMDAERIFDEMP 386

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + S +  +  L  +  +D AL ++++M+   ++P+     +++  FC+ G++ 
Sbjct: 387 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 446

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI----------- 329
            A++V   M   G +  V TYNT+++G C + +LS A +    M + G+           
Sbjct: 447 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 506

Query: 330 ------------------------QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                                   +P+V+T+NTLI GFCK  ++ + N ++++M +  + 
Sbjct: 507 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 566

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN ++Y  LINGY  +G       L++EM+  G +  I+T N ++ G C+ G   KA   
Sbjct: 567 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 626

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    +VP+  TY+ LI G    +N +RAF L   M  SG  P+   + ++++ F +
Sbjct: 627 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 686

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
                 A  ++L+M+E+ + PD    + L +G  H  ++ L  A ++  +M  RG +P
Sbjct: 687 QGRMQEAELIMLKMIERGVNPDRSTYTSLING--HVTQNNLKEAFRVHDEMLQRGFVP 742



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 151/284 (53%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +       K    A + F +M + G  P   +    ++       ++ A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++ M +  + P+V T N ++  FCK   +E+  E++ +M S    P+  +Y  LI+G+
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN G +S A +  + M + G +  +IT NT++ G+C+ G   +A+   S M    + P+ 
Sbjct: 580 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 639

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLING+ +  N +   +L  +M  +G+  D++TYN ++ G  ++G+ ++A  ++  
Sbjct: 640 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 699

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +  + P+ STY++LI G   + N + AF+++  M++ G  P+
Sbjct: 700 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 145/314 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +        A     +M + G +  + + N  L+ L   + +  A   + E
Sbjct: 430 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 489

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YT   +++ + K G + +AV +F+ M      P V TYNTLI G C    
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +    +  N M    I PN I++  LI G+C  G + EA R++ EM        ++T NT
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ GY + GN+         ML  GI  D +TYN LI G  KE    +A  LV  ++ + 
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TY+ ++ G   +   + A  +   MI  G  P++  +  L++      +   A 
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 729

Query: 494 EVLLEMLEKCMAPD 507
            V  EML++   PD
Sbjct: 730 RVHDEMLQRGFVPD 743



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/247 (19%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 314 LSLAMKFKNLMEKN--GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           L L  +F + +  N    + ++ +F+ +I    +  +L +A  +   M   +    V   
Sbjct: 111 LQLGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIV 170

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            +L+  YG  G++                   L ++ L+    +  K ++     + L  
Sbjct: 171 ESLVLTYGNCGSNP------------------LVFDLLVRTYVQARKLREGCEAFRVLKS 212

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L  + +  ++L+ G       + A+++Y+ ++RSG + N +   ++++  C+N+  + 
Sbjct: 213 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 272

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
               L +M EK + PD +  + L +     G  E A +L   M  +GL P  F     IN
Sbjct: 273 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 332

Query: 552 CAPENGE 558
              + G+
Sbjct: 333 GLCKTGK 339


>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
          Length = 418

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 211/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++++++ ++     D  S +F++IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVFEAILEAKGAQRSDVYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y       +A + F   R++ F    ++C K L   +  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFLHDALECFRLTREHKFWVPFDTCRKVLEHFMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G +  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+++AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+ ++    Y+EMLR G   D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E A    K MI+   R +   +  L+S  C+      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G  +   KL ++M+  G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVP 414



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 85/210 (40%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     +  +D+A+  YKEM 
Sbjct: 209 YSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------- 305
           R   SP++ T N +++  CK G +++A ++   M   G  P   TY TLI          
Sbjct: 269 RQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 306 -------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                    SG C +G    A K    M   G++P+  T+  +I
Sbjct: 329 TALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMII 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG +   +++  EM+     P VVT
Sbjct: 389 NEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418


>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           macrophylla]
          Length = 431

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 218/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFYKE+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN V + TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+  
Sbjct: 243 LVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R ++  +  L+S  
Sbjct: 303 HLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    +  IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+   + TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L + + +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      ++M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 135/472 (28%), Positives = 242/472 (51%), Gaps = 24/472 (5%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD 168
           V  VL  ++ +   SL FF +V   +     ++++  ++HIL++ R +  + + L  ++D
Sbjct: 71  VDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVD 130

Query: 169 SDSF-DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
              F D  + ++D ++  YR    SP VFD++ K Y  +   +NA   F  M   G +P 
Sbjct: 131 LCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPS 190

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + SCN  L++L+ +     A   Y++M R  I P+V+ ++++++AFCK G ++ A    K
Sbjct: 191 LRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVK 250

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            ME++G  P++ TY++LI+G+ + G +  A      M + G+  NV+T+  LI G+CK+ 
Sbjct: 251 KMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQC 310

Query: 348 KLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           K+ EA ++   M+    + P+   Y  LI+GY + G  +    L +EMLR G+K ++   
Sbjct: 311 KMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFIC 370

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N+LI G CK G+  +A  ++  +   +L P++ +Y+ L+ G C   ++  AF L   M++
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  P    +  L+   C+   FD A ++   M++  +APD +  S L  GL      E 
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 527 AMKLFRKMEIR--------------GLLPKG--------FDKLRTINCAPEN 556
           A  L++ +  R              GL   G        FDK++ + C+P+ 
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDG 542



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 36/384 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIALGFYK 252
           + + LL K Y  + K   A      M++   L P   +    +     + ++D A+    
Sbjct: 297 VTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLD 356

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM R  +  N++  N +++ +CK G I  A  V   M      P   +YNTL+ G+C +G
Sbjct: 357 EMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREG 416

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             S A    + M + GI+P V+T+NTL+ G C+ G   +A +I+  M    V+P+ V Y+
Sbjct: 417 HTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYS 476

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++G  ++ N E  ++L++++L  G     +T+N +I GLCK GK  +A  +   +   
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536

Query: 433 SLVPNASTYSALITGQCVRKNSERAF---------------QLYKSMIRS---------- 467
              P+  TY  LI G C   N  +AF               ++Y S+I            
Sbjct: 537 GCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEX 596

Query: 468 ----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                     G  PN   +  L+  +C+    D+A     EM E  ++ + II S + SG
Sbjct: 597 TDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSG 656

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L+  G+ + A  L +KM   G  P
Sbjct: 657 LYRLGRIDEANLLMQKMVDHGFFP 680



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 152/338 (44%), Gaps = 45/338 (13%)

Query: 209 FRNATDTFCQMRDYG-------------FLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +R   D +C+  + G               P IE  N  +S L  S R+        EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG 604

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++PN+ T   ++  +CK G++++A   +  M   G   ++   +T++SG    G + 
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 316 LAMKFKNLMEKNG-----------------IQ---------------PNVITFNTLIFGF 343
            A      M  +G                 IQ               PN I +N  I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK GK+ +A R FS +      P+  TY TLI+GY   GN +    L +EMLR G+  +I
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYNALI GLCK     +A  L   L +  L PN  TY+ LI G C   N + AF+L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           MI  G  P+   +  L++  C++ D +R+ ++L +M++
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIK 882



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 189/459 (41%), Gaps = 73/459 (15%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S++F+L  K+    +      + + L ++ L K       F +A   +  M   G  P  
Sbjct: 419 SEAFNLCDKMLQEGI------EPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDE 472

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
              +  L  L   E  + A   +K++     + +  T N ++   CK+G +  A E+F  
Sbjct: 473 VGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDK 532

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN--------------------- 327
           M+ +G  P   TY TLI G+C    +  A K K  ME+                      
Sbjct: 533 MKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRR 592

Query: 328 --------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                         G+ PN++T+  LI G+CK+G L +A   + EM    +S N++  +T
Sbjct: 593 LVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICST 652

Query: 374 LINGYGQVGNSEMGASLYEEMLRNG--------IKVDI---------------------- 403
           +++G  ++G  +    L ++M+ +G        +K DI                      
Sbjct: 653 MVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLP 712

Query: 404 --LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
             + YN  I GLCK GK   A      L     VP+  TY  LI G     N + AF+L 
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R G  PN   +  L++  C++E+ DRA  +  ++ +K + P+ +  + L  G    
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           G  + A KL  KM   G+ P        IN   ++G+ E
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIE 871



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 191/480 (39%), Gaps = 84/480 (17%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           + K  S  + T+++++    K  K   +E +LRG+ +  +  +P +              
Sbjct: 288 SEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAAL-VPDER------------- 333

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
               + +L   Y    K  +A     +M   G    +  CN  ++       +  A G  
Sbjct: 334 ---AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    + P+ Y+ N ++  +C+ G    A  +   M   G  P+V TYNTL+ G C  
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 312 GLLSLAMKFKNLMEKNGIQPNV-----------------------------------ITF 336
           G    A++  +LM K G+ P+                                    ITF
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NT+I G CK GK+ EA  IF +MK    SP+ +TY TLI+GY +  N      +   M R
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I   I  YN+LI GL K  +  +   L+ ++    L PN  TY ALI G C     ++
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML---------------- 500
           AF  Y  M  +G   N  I   ++S   +    D A  ++ +M+                
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 501 -------------EKC---MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                        E C   + P++I+ +   +GL   GK + A + F  + ++G +P  F
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 174/406 (42%), Gaps = 34/406 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+   ++F+  S L+  IL   R    S + F+ +        K   A + F +M+
Sbjct: 477 TLLDGLFKMENFEGASTLWKDILA--RGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   +    +     +  V  A      M R  ISP++   N ++    K   + 
Sbjct: 535 DLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLV 594

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++   M   G  P++ TY  LI G C +G+L  A      M +NG+  N+I  +T++
Sbjct: 595 EXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMV 654

Query: 341 FGFCKKGKLHEANRIFSEMK--------------------------------ATNVSPNV 368
            G  + G++ EAN +  +M                                  T + PN 
Sbjct: 655 SGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNN 714

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + YN  I G  + G  +     +  +   G   D  TY  LI G    G   +A  L  +
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  LVPN  TY+ALI G C  +N +RA +L+  + + G  PN   +  L+  +C+  +
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D A ++  +M+E+ ++P  +  S L +GL   G  E +MKL  +M
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 120/230 (52%), Gaps = 3/230 (1%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D+GF P  E    FL S +    +        E  +  + PN    N+ +   CK G
Sbjct: 672 KMVDHGFFPDHEC---FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 728

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A   F  +   GF+P   TY TLI G+   G +  A + ++ M + G+ PN++T+N
Sbjct: 729 KVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 788

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK   +  A R+F ++    + PNVVTYNTLI+GY ++GN +    L ++M+  
Sbjct: 789 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 848

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           GI   ++TY+ALI GLCK G  +++  L+  + K  +      Y  L+ G
Sbjct: 849 GISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 92/184 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+++         K  +A   F  +   GF+P   +    +     +  VD A     E
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDE 774

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + PN+ T N +++  CK   ++RA  +F  +   G  P+V TYNTLI G+C  G 
Sbjct: 775 MLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGN 834

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A K K+ M + GI P+V+T++ LI G CK G +  + ++ ++M    V   ++ Y T
Sbjct: 835 MDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCT 894

Query: 374 LING 377
           L+ G
Sbjct: 895 LVQG 898



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 73/137 (53%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P I + N  ++ L  SE VD A   + ++ +  + PNV T N ++  +CK+G
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIG 833

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A ++   M   G  PSV TY+ LI+G C  G +  +MK  N M K G+   +I + 
Sbjct: 834 NMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYC 893

Query: 338 TLIFGFCKKGKLHEANR 354
           TL+ G  K    +E ++
Sbjct: 894 TLVQGGFKTSNYNEMSK 910


>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           salviifolia]
          Length = 431

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 219/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++ F  ++S+L+ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PS  +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G+L    + K+ M  +G+QP+V T++ LI G  K+ K+ +A+ +F EM    
Sbjct: 183 LMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ D+ +  L P+  TY+ LI G C   + + AF+  K MI+   R +  ++  L+S  
Sbjct: 303 DLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P   S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++   K   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  +M    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 207 GVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S   +P + TYNTLI G C KG L  A    + M + G++P+ IT+ TLI G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+  D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 114/217 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L    +   K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++  +M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  ++P+  TY  +I
Sbjct: 335 SAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 120/301 (39%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++            T   ++          L   F 
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 130

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN L+  FCK G +  A  +F  +    + P+ V+YNTL+NGY ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 190

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  + G  L   ML +G++                                   P+  TY
Sbjct: 191 GVLDEGFRLKSAMLASGVQ-----------------------------------PDVYTY 215

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G       + A +L+  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 216 SVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 275

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + + PD I  + L  GL   G  + A  L   M  +GL P        I+   + G+ +S
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDS 335

Query: 562 G 562
            
Sbjct: 336 A 336


>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
          Length = 418

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 211/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++++++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  +  VF  +   G  PSV ++NTL++G+  +G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ EAN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI    R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PDS   + + +     G      KL ++M+  G +P
Sbjct: 372 MLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 170/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF+    +   +L  ++    F L    +  IL     C   +S   F+
Sbjct: 85  AIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +    + R +   F  +R +G  P + S N  ++  +    +D        M  +
Sbjct: 141 ILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  + +EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M+   I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 321 SCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 SGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 415



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 152/344 (44%), Gaps = 32/344 (9%)

Query: 107 FRVKHVLLKVQKDYVLSLEFF--TW------VQTHKPSSLTLETHSIVLHILTKNRKFKS 158
           FRV     +   ++++ L++F   W      ++   P+SL     +I++H   K  + + 
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF--FNILMHRFCKEGEIRL 154

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTF 216
           S+S+                FD+I    R     P V  F+ L   Y  +          
Sbjct: 155 SQSV----------------FDAI----RKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLK 194

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK 
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKN 254

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A+E++K M S    P + TYNTLI G C KG L  A    N M   G++P+ IT+
Sbjct: 255 GKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITY 314

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            TLI G CK G L  A      M   N+  + V Y  LI+G  Q G S     +  EML 
Sbjct: 315 TTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 374

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+K D  TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 375 VGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418


>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
           venustus]
          Length = 418

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 211/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   R++ F    ++C K L  L+  +   +  GFYKE+    
Sbjct: 72  LITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G +  A  VF  +   G  PSV ++NTL+SG+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ EAN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y+++L  G   D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L  
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRG 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G  +   KL ++M   G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 82/210 (39%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A + F +M D G +P   +    +     + RVD+A+  YK++ 
Sbjct: 209 YSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLL 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------- 305
               SP++ T N ++   CK G +++A ++   M      P   TY TLI          
Sbjct: 269 SQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLE 328

Query: 306 -------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                    SG C +G    A K    M   G++P+  T+  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMII 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG +   +++  EM      P VVT
Sbjct: 389 NEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418


>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           micromera]
          Length = 431

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 215/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFYKE+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQAN 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   N + AF+    MI    R +   +  L+S  
Sbjct: 303 DLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L  ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    +  IL     C    S   F+
Sbjct: 91  AIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEIL----ECGYPXSLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+N LI+G CKKG L +AN +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + GN +        M+   I++D + Y ALI GLC+EG+   A  +++ +    L P+
Sbjct: 327 CCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 AXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 113/229 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 203 MXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGR 262

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S   +P + TYN LI G C KG L  A      M   G++P+ IT+ T
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTT 322

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G       +   ML  G
Sbjct: 323 LIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           +K D  TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 383 LKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 110/217 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLB 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++   M +  + P+  TY  +I
Sbjct: 335 TAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 2/182 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   +   DL  +++  +L    + D   + ++ L      +   + A D   +M 
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLLPD--LITYNXLIYGLCKKGDLKQANDLIXEMS 309

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   +    +        +B A      M    I  +      ++   C+ G   
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXV 369

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + M S+G  P   TY  +I+  C KG +    K    M+++G  P+V+T+N L+
Sbjct: 370 DAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 429

Query: 341 FG 342
            G
Sbjct: 430 NG 431


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 232/458 (50%), Gaps = 14/458 (3%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W+ L  ++  L   R  H  L        +L+F  WV       L   TH  
Sbjct: 64  YTILTIDRWESLNHMAYGLKQLRPVHGRL--------ALKFLKWVIKQPGLELKHLTHMY 115

Query: 146 VL--HILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKT 202
            L  HIL K R + S++SILR +       + SK +F +++ +Y +C+S P VFDLL + 
Sbjct: 116 CLTAHILVKARMYDSAKSILRHLC---QMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRV 172

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y        A +TF  +   GF P + +CN  L+S++  +R ++    ++EM    I PN
Sbjct: 173 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 232

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T N++++  C  G +++A  + K ME  GF+P++ TYNTL++ +C KG    A++  +
Sbjct: 233 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 292

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI+ +V T+N  I   C   +  +A  +  +M+   +SPN VTYNTLING+ + G
Sbjct: 293 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 352

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              + A ++ EM +  +  + +TYNALI G C  G  ++A  L+  ++   L  N  TY 
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYG 412

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L+ G C  +  E A +L + M  +        + +L+   C+N   D A +++  M + 
Sbjct: 413 TLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKD 472

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + PD I  S L +G    G  + A ++  +M   GL+
Sbjct: 473 GVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 510



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 164/351 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y  + +++ A +    M   G    + + N F+ +L  + R   A    K+
Sbjct: 269 VTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 328

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  ISPN  T N +++ F K G I  A +VF  M      P+  TYN LI GHC+ G 
Sbjct: 329 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 388

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A++  + ME  G++ N +T+ TL+ G CK  K   A R+   M+  ++    + Y  
Sbjct: 389 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 448

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G  +    L   M ++G+  D++TY++LI G C+ G  K A  ++  + ++ 
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LV N   YS LI   C   N   A ++Y  M  +G   +     +L+S+ C++     A 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L  M    + P+SI    + +G    G    A   F  M   G  P  F
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 619



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 153/348 (43%), Gaps = 35/348 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++  +   ++ +A   + EM +  +SPN  T N ++   C +G  E A+ +  +ME+
Sbjct: 342 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 401

Query: 292 MGFIPSVTTYNTL-----------------------------------ISGHCNKGLLSL 316
            G   +  TY TL                                   I G C  G+L  
Sbjct: 402 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 461

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A++    M K+G+ P+VIT+++LI GFC+ G +  A  I   M  + +  N + Y+TLI 
Sbjct: 462 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 521

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + Q GN      +Y  M  NG   D  T N L+  LC++GK  +A   +  + +  LVP
Sbjct: 522 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 581

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N+ TY  +I G     +   AF  +  MI+ G  P+   +  L+   C+  +   A + L
Sbjct: 582 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 641

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +     A DS++ + L +     G    A+ LF KM    +LP  +
Sbjct: 642 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 689



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L  +  +D A+     M ++ ++P+V T + +++ FC++G I+ A E+   M   G
Sbjct: 449 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 508

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            + +   Y+TLI   C  G ++ AMK   +M  NG   +  T N L+   C+ GKL EA 
Sbjct: 509 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 568

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           +    M    + PN +TY+ +INGYG +G+     S +++M++ G      TY +L+ GL
Sbjct: 569 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 628

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK G   +A   +  L       ++  Y+ L+   C   N   A  L+  M+++   P+ 
Sbjct: 629 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 688

Query: 474 HIFEMLMSTFCQNEDFDRAAEVL-LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           + +  L++  C+      A  +    M    + P+ ++ + L  GL   G  + A   F 
Sbjct: 689 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 748

Query: 533 KMEIRGLLP 541
           +M  +G  P
Sbjct: 749 EMMKKGTCP 757



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 1/366 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  L   +        A   +  M   G      +CN  +SSL    ++  A  F   
Sbjct: 514 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 573

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + PN  T + +++ +  +G    A   F +M   G  PS  TY +L+ G C  G 
Sbjct: 574 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 633

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A KF N +       + + +NTL+   CK G LHEA  +F +M   NV P+  TY++
Sbjct: 634 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 693

Query: 374 LINGYGQVGNSEMGASLY-EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           L+ G  + G +     L+   M R  +  + + Y  L+ GL K G  K A Y  +++ K 
Sbjct: 694 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 753

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+   ++A+I     R    +A   + +M   G  PN   + +L+  F + +   R 
Sbjct: 754 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 813

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
             +   M+ + + PD +    L  GL   G  +L +KL  KM + G L   F     IN 
Sbjct: 814 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 873

Query: 553 APENGE 558
             E+G+
Sbjct: 874 YSESGK 879



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 146/346 (42%), Gaps = 36/346 (10%)

Query: 232  NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            N  L+    S  +  A+  + +M +N + P+ YT + ++   C+ G    AV +F     
Sbjct: 657  NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 716

Query: 292  MG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G   P+   Y  L+ G    G    A  F   M K G  P+ + FN +I    ++G++ 
Sbjct: 717  RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 776

Query: 351  EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            +AN  FS M+   V PN+ TYN L++G+ +        SLY  M+R GI  D LT+++LI
Sbjct: 777  KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 836

Query: 411  LGLCKEG-----------------------------------KTKKAAYLVKDLDKNSLV 435
            LGL K G                                   K +KA  LV  ++   + 
Sbjct: 837  LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 896

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            P+  TY+ +  G   +     +  +   M+ +G  P    +  L++  C+  D   A ++
Sbjct: 897  PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 956

Query: 496  LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EM         +  S +  GL HCGK E AM +   M    LLP
Sbjct: 957  KDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1002



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 150/350 (42%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + F+ +  + + R +   A D F  MR +G  P + + N  L      + +   L  Y  
Sbjct: 760  VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 819

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M R  I P+  T + ++    K GI +  V++   M   G +    T+N LI+ +   G 
Sbjct: 820  MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 879

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A    N M   G+ P+  T+N +  G  KK    E+  +  EM    V P    Y T
Sbjct: 880  MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 939

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LING  +VG+ +    L +EM   G     +  +A++ GL   GKT+ A  ++  + +  
Sbjct: 940  LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 999

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            L+P  +T++ L+   C       A +L   M   G + +   + +L+   C N D   A 
Sbjct: 1000 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 1059

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            E+  EM  + + P+    + L   +          KL   ++ RGL+  G
Sbjct: 1060 ELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWG 1109



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 2/327 (0%)

Query: 216  FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
            F +M   G  P   + N  + S     ++  A  F+  MR   + PN+ T N+++H F K
Sbjct: 747  FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 276  LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
               + R + ++  M   G  P   T+++LI G    G+  L +K    M   G   +  T
Sbjct: 807  KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 336  FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            FN LI  + + GK+ +A  + + M    V P+  TYN + NG  +         +  EML
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 396  RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             NG+      Y  LI G+C+ G  + A  L  +++      +    SA++ G      +E
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 456  RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSEL 514
             A  +   M+R    P    F  LM  FC++     A + L  ++E C +  D +  + L
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNVL 1045

Query: 515  YSGLHHCGKDELAMKLFRKMEIRGLLP 541
              G+   G    A +L+ +M  R L P
Sbjct: 1046 IMGMCANGDSAAAFELYEEMRHRDLCP 1072



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 102/207 (49%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ LI  + K+G +  A   F  +      P+V T N ++    +   +E+  SL+ EM
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              GI  ++ T+N LI GLC EG  KKA  L+K +++N  VP   TY+ L+   C +   
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A +L   MI  G   +   + + +   C N    +A  +L +M ++ ++P+ +  + L
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +G    GK  +A ++F +M    L P
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSP 371



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 50/398 (12%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLP--IIESC--NKFLSSLLDSERVDIALGFYK 252
           ++L  +     K   A    C M   G +P  I   C  N +  S+ D      A  F+ 
Sbjct: 552 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY-GSIGDPLN---AFSFFD 607

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT---TYNTLISGHC 309
           +M +    P+ +T   ++   CK G     VE  K +  + +IP       YNTL++  C
Sbjct: 608 DMIKCGQHPSFFTYGSLLKGLCKGG---NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 664

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF-SEMKATNVSPNV 368
             G L  A+   + M +N + P+  T+++L+ G C+KGK   A  +F + M    + PN 
Sbjct: 665 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 724

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD-------------------------- 402
           V Y  L++G  + G+ +     +EEM++ G   D                          
Sbjct: 725 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 784

Query: 403 ---------ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                    + TYN L+ G  K+    +   L   + +  + P+  T+ +LI G      
Sbjct: 785 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 844

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            +   +L   MI  G   ++  F +L++ + ++    +A +++  M    + PD    + 
Sbjct: 845 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 904

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           +++GL+       +  +  +M   G++PK    +  IN
Sbjct: 905 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 942


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 140/514 (27%), Positives = 245/514 (47%), Gaps = 49/514 (9%)

Query: 83  NIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH---KPSSLT 139
           N  Y+ L    W+ L  ++      R  H         VL+L+F  WV      +P+ LT
Sbjct: 3   NSIYTILTIGRWESLNHMNYKFASLRPIH--------GVLALKFLKWVIKQPGLEPNHLT 54

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
                I  H+L + R +  ++SIL+ +   +S    + LF  ++ +Y +C S+P VFDLL
Sbjct: 55  -HILGITTHVLVRARLYGYAKSILKHLAQKNSGS--NFLFGVLMDTYPLCSSNPAVFDLL 111

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y  +    +A +TF  M   GF P + +CN  ++S++ + R  +   F+K+M  +R+
Sbjct: 112 IRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSRV 171

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            PNV + N+++   C  G +++AV +   ME  G++P++ +YNTL+S  C KG    A+ 
Sbjct: 172 CPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALV 231

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + ME  GIQ +V T+N  I   C+  +  +   +  +M+   ++PN V+YNTLING+ 
Sbjct: 232 LIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFV 291

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G   +   ++ EM+   +  +++TYN LI G C  G  ++A  L+  ++ N + PN  
Sbjct: 292 KEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEV 351

Query: 440 T-----------------------------------YSALITGQCVRKNSERAFQLYKSM 464
           T                                   ++ +I G C     + AFQL   M
Sbjct: 352 TIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEM 411

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
            + G  P+   F +L++ FC+  + ++A EV+ ++  +   P+++I S L       G  
Sbjct: 412 CKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNV 471

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
              MK +  M + G     F     +    ENG+
Sbjct: 472 YEGMKFYAAMNLNGQNADNFTCNSLVASLCENGK 505



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 169/398 (42%), Gaps = 37/398 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L      + K + A +    M   G++P I S N  LS      R   AL     M 
Sbjct: 178 FNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFALVLIHHME 237

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I  +V T NM + + C+     +   V K M +    P+  +YNTLI+G   +G + 
Sbjct: 238 CKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLINGFVKEGKIG 297

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +A +  N M +  + PN+IT+N LI G+C  G   EA R+   M+A +V PN VT  TL+
Sbjct: 298 VATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPNEVTIGTLL 357

Query: 376 NGYGQVGNSEMGASLYE-----------------------------------EMLRNGIK 400
           NG  +    ++  ++ E                                   EM ++G+ 
Sbjct: 358 NGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVY 417

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+T++ LI G CK G   KA  ++  + +   VPN   +S LI   C   N     + 
Sbjct: 418 PDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKF 477

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y +M  +G   +      L+++ C+N     A E L  +    + P+S+    + +G  +
Sbjct: 478 YAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYAN 537

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF--DKLRTINCAPEN 556
            G    A  +F KM   G  P  F    L  + C  +N
Sbjct: 538 VGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQN 575



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 165/362 (45%), Gaps = 35/362 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR+    P   S N  ++  +   ++ +A   + EM    +SPN+ T N++++ +C  G
Sbjct: 270 KMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCING 329

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTL--------------------------------- 304
             E A+ +   ME+    P+  T  TL                                 
Sbjct: 330 NFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHT 389

Query: 305 --ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
             I G C  GLL  A +    M K+G+ P++ITF+ LI GFCK G L++A  + S++   
Sbjct: 390 VMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYRE 449

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN V ++TLI    +VGN   G   Y  M  NG   D  T N+L+  LC+ GK  +A
Sbjct: 450 GFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEA 509

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              +  + +  LVPN+ T+  +I G     +   AF ++  MI  G  P+   +  L+  
Sbjct: 510 EEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKV 569

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+ ++F  A ++L ++    +A D+I  + L   +   G    A++LF +M    +LP 
Sbjct: 570 LCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPD 629

Query: 543 GF 544
            +
Sbjct: 630 SY 631



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 1/297 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A     EM ++ + P++ T +++++ FCK+G + +A EV   +   GF+P+   ++T
Sbjct: 401 LDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   C  G +   MKF   M  NG   +  T N+L+   C+ GKL EA      +    
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT++ +INGY  VG+     S++++M+  G      TY +L+  LCK     +A 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+K L    L  +  +Y+ LI       N   A +L++ MI++   P+ + +  ++S  
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 484 CQNEDFDRAAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +      A   L  +++K  +  +SI+ +    GL   G+ + A+ LF++ME +GL
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGL 697



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 146/348 (41%), Gaps = 3/348 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY-KEMRRNRISPNVYTLNMVM 270
           A   F +M     LP   +    LS L+   R+  A  F  + M++  ++ N       +
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
               K G  + A+ +FK ME  G    +   N++  G+   G +  A    +      + 
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+ TFN L+ G+ +   +    ++++ M+ +   PN +TY++LI G    G  E+G  +
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +  +     +D LT+N LI   C+     K   L  +++   +  +  T  A+      
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVR 853

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           R  S+  F     M++ G  P    +  +M   C+  D   A ++  +M+   ++ D   
Sbjct: 854 RMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAA 913

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP--KGFDKLRTINCAPEN 556
              +  GL  CGK E AM + ++M     +P    F  L  + C  +N
Sbjct: 914 ECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDN 961



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/350 (20%), Positives = 143/350 (40%), Gaps = 37/350 (10%)

Query: 227  IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            I+ +C  F+  L  + +   AL  +KEM    +S ++  LN +   + ++G +  A  + 
Sbjct: 667  IVYTC--FIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLI 724

Query: 287  KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
                +   IP++TT+N L+ G+     +    K  NLM ++G  PN +T+++LI G C  
Sbjct: 725  SKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNH 784

Query: 347  GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            G L    ++     A + + + +T+N LI    ++ + +    L   M    + +D  T 
Sbjct: 785  GMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQ 844

Query: 407  NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             A+   L +   ++     + ++ K   +P +  Y  ++   C   + + AF+L   M+ 
Sbjct: 845  KAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVA 904

Query: 467  SGCR-----------------------------------PNKHIFEMLMSTFCQNEDFDR 491
             G                                     P    F  LM  FC+ ++F  
Sbjct: 905  LGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKE 964

Query: 492  AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  + + M    +  D +  + L S     G    A+  + +++ +GLLP
Sbjct: 965  AHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLP 1014



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 114/287 (39%), Gaps = 35/287 (12%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            F++L   Y+  +   +    +  MR  GF P   + +  +  L +   +++ +   K   
Sbjct: 739  FNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLKMFI 798

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM----------------------- 292
                + +  T NM++   C++  +++ +++  NME                         
Sbjct: 799  AESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQ 858

Query: 293  ------------GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                        GFIP+   Y T++   C  G +  A K K+ M   GI  +      ++
Sbjct: 859  NYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGISLDDAAECAMV 918

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             G    GK+ EA  I   M      P   T+ TL++ + +  N +   +L   M    +K
Sbjct: 919  RGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVK 978

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +DI+ YN LI   C  G    A    +++ +  L+PN +TY  L++ 
Sbjct: 979  LDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSA 1025


>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/491 (28%), Positives = 244/491 (49%), Gaps = 40/491 (8%)

Query: 89  LIHSDWKKLTA--LSTHLTPFRVKHVLLKVQKD-YVLSLEFFTWVQTHKPSSLTLETHSI 145
           ++   W  L    + ++LT   +  VLL +  D   +S  FF WV+++     +L++   
Sbjct: 46  VVKGHWNSLLKPNVGSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWT 105

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           ++H L K+++FK+++++L  I   D    PS L ++++  +   DS+  +   L   YA+
Sbjct: 106 MIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVL-NAVVRIHDDPDSNSQILSWLVIFYAN 164

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            +  ++A   F  MR +GF P + +C   L+SL  +   ++    YK+M R  + PN++ 
Sbjct: 165 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 224

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+++HA CK G +E+A ++   MES    P + TYNTLIS +C KG+   A+  ++ ME
Sbjct: 225 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 284

Query: 326 KNGIQPNVITFNTLIFGFCKK------------------------------------GKL 349
           + G+ P+++T+N+LI+GFC++                                    GK+
Sbjct: 285 RGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKI 344

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +ANR+ +EM    V P+ VT NTLIN Y ++G+      + ++ML  G+K D  T+ AL
Sbjct: 345 KDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKAL 404

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G CK  +   A   + ++      P+ STYS L+     + N E   +L   + R G 
Sbjct: 405 IHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGL 464

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
             +  ++  L+   C+ +  + A  +   M  K M  DS++ + L       GK   A  
Sbjct: 465 FVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASD 524

Query: 530 LFRKMEIRGLL 540
           +  +M+ R L+
Sbjct: 525 MLDEMDKRRLM 535



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 10/262 (3%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+  + N  +   A++    M  +G +P++     L+    K    +   +++ +M    
Sbjct: 158 LVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVG 217

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN+  +N LI+   + G+ E    L  EM    I  D+ TYN LI   CK+G   +A 
Sbjct: 218 VVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEAL 277

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            +   +++  + P+  TY++LI G C   N  E A +L + M   G  P    +  ++  
Sbjct: 278 GIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRK 337

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+      A  +L EM E+ + PD++  + L +     G    AMK+ +KM   GL P 
Sbjct: 338 LCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPD 397

Query: 543 ---------GFDKLRTINCAPE 555
                    GF KL  ++ A E
Sbjct: 398 QFTFKALIHGFCKLHEVDSAKE 419



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/224 (20%), Positives = 100/224 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + +      K ++A     +M +    P   +CN  +++      +  A+   K+
Sbjct: 329 VTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKK 388

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H FCKL  ++ A E    M   GF PS +TY+ L+  + ++  
Sbjct: 389 MLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDN 448

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
               ++  + + + G+  ++  +  LI   CK  K+  A RIF+ M+   +  + V Y +
Sbjct: 449 KEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTS 508

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           L   Y + G +   + + +EM +  + + +  Y         +G
Sbjct: 509 LAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDG 552



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 96/219 (43%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + N  L  L +  ++  A     EM   ++ P+  T N +++A+CK+G +  A
Sbjct: 323 GLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSA 382

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++V K M   G  P   T+  LI G C    +  A +F   M   G  P+  T++ L+  
Sbjct: 383 MKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDS 442

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           +  +       R+  E+    +  ++  Y  LI    ++   E    ++  M   G+K D
Sbjct: 443 YYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGD 502

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            + Y +L     K GK   A+ ++ ++DK  L+     Y
Sbjct: 503 SVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 541


>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           macrostachya]
          Length = 414

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 212/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 1   TLDSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  ++  +   +  GFY+E+    
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEILECG 120

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 121 YPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 180

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 241 CKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ   +  A +VL E
Sbjct: 301 ITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLRE 360

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 MLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 74  AIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 129

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 130 ILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 189

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 190 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLA 249

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 309

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG+   A  +++++    L P+
Sbjct: 310 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPD 369

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +     +L K M R G  P+   + +LM+
Sbjct: 370 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++      F     T   ++          L   F 
Sbjct: 54  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHMMKLKYFKLVWGFY 113

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN L+  FCK+G +  A  +F+ +    + P+VV++NTL+NGY ++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 174 GDLDEGFRLKSAMHASGVQ-----------------------------------PDVYTY 198

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A +L+  M+  G  PN   F  L+   C++   D A E+  +ML 
Sbjct: 199 SVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLS 258

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E+
Sbjct: 259 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 318

Query: 562 G 562
            
Sbjct: 319 A 319


>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 418

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 208/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL T+  ++H L  ++    ++S++R ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHTYCTMIHFLCTHQMLLEAKSLIRIVVSRKGKDSASAVFAAILGTKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y       +A   F   + + F    ++C K L  L+  +   +   FYKE+    
Sbjct: 72  LMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N+VMH FCK G + RA  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ EAN +F+EM    + PN VT+ TLI+ +
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +    +Y++ML  G   D++TYN LI GLCK+G  K+   L+ ++  N L P+ 
Sbjct: 252 CKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ    D A ++  E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G    A +L ++M+  G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/301 (20%), Positives = 120/301 (39%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + +M A+ + G +  A++ F+  +   F     T   ++          L   F 
Sbjct: 65  DIYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFY 124

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN ++  FCK+G++  A  +F                         
Sbjct: 125 KEILECGYPASLYFFNIVMHRFCKEGEMRRAQSVF------------------------- 159

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
                     + + + G++  ++++N L+ G  + G   +   L   +  + + P+  TY
Sbjct: 160 ----------DAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 209

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 210 SVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLS 269

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           +  +PD I  + L  GL   G  +    L  +M + GL P        I+   + G+ E+
Sbjct: 270 QGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLET 329

Query: 562 G 562
            
Sbjct: 330 A 330



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 85/210 (40%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A + F +M D G +P   +    +     +  VD A+  YK+M 
Sbjct: 209 YSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SP++ T N +++  CK G +++   +   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLE 328

Query: 316 LAMKFKNLMEKN-----------------------------------GIQPNVITFNTLI 340
            A +F+  M K                                    G++P+  T+  +I
Sbjct: 329 TAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMII 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG +  A+R+  EM+     P VVT
Sbjct: 389 NEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 238/471 (50%), Gaps = 16/471 (3%)

Query: 73   EPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQT 132
            +  G D++  +  Y+ L    W+ L  ++  L   R  H  L        +L+F  WV  
Sbjct: 804  QTSGSDVE--SSIYTILTIDRWESLNHMAYGLKQLRPVHGRL--------ALKFLKWVIK 853

Query: 133  HKPSSLTLETHSIVL--HILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMC 189
                 L   TH   L  HIL K R + S++SILR +       + SK +F +++ +Y +C
Sbjct: 854  QPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQ---MGIGSKSIFGALMDTYPLC 910

Query: 190  DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            +S P VFDLL + Y        A +TF  +   GF P + +CN  L+S++  +R ++   
Sbjct: 911  NSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWS 970

Query: 250  FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             ++EM    I PNV T N++++  C  G +++A  + K ME  GF+P++ TYNTL++ +C
Sbjct: 971  LFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYC 1030

Query: 310  NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             KG    A++  + M   GI+ +V T+N  I   C   +  +A  +  +M+   +SPN V
Sbjct: 1031 KKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEV 1090

Query: 370  TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            TYNTLING+ + G   + A ++ EM +  +  + +TYNALI G C  G  ++A  L+  +
Sbjct: 1091 TYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHM 1150

Query: 430  DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +   L  N  TY  L+ G C  +  E A +L + M  +        + +L+   C+N   
Sbjct: 1151 EAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGML 1210

Query: 490  DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            D A +++  M +  + PD I  S L +G    G  + A ++  +M   GL+
Sbjct: 1211 DEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLV 1261



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 164/351 (46%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + ++ L   Y  + +++ A +    M   G    + + N F+ +L  + R   A    K+
Sbjct: 1020 VTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 1079

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            MR+  ISPN  T N +++ F K G I  A +VF  M      P+  TYN LI GHC+ G 
Sbjct: 1080 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 1139

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
               A++  + ME  G++ N +T+ TL+ G CK  K   A R+   M+  ++    + Y  
Sbjct: 1140 FEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTV 1199

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LI+G  + G  +    L   M ++G+  D++TY++LI G C+ G  K A  ++  + ++ 
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            LV N   YS LI   C   N   A ++Y  M  +G   +     +L+S+ C++     A 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L  M    + P+SI    + +G    G    A   F  M   G  P  F
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 1370



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 153/348 (43%), Gaps = 35/348 (10%)

Query: 232  NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            N  ++  +   ++ +A   + EM +  +SPN  T N ++   C +G  E A+ +  +ME+
Sbjct: 1093 NTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEA 1152

Query: 292  MGFIPSVTTYNTL-----------------------------------ISGHCNKGLLSL 316
             G   +  TY TL                                   I G C  G+L  
Sbjct: 1153 AGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDE 1212

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A++    M K+G+ P+VIT+++LI GFC+ G +  A  I   M  + +  N + Y+TLI 
Sbjct: 1213 AVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIY 1272

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
             + Q GN      +Y  M  NG   D  T N L+  LC++GK  +A   +  + +  LVP
Sbjct: 1273 NFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVP 1332

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
            N+ TY  +I G     +   AF  +  MI+ G  P+   +  L+   C+  +   A + L
Sbjct: 1333 NSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFL 1392

Query: 497  LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              +     A DS++ + L +     G    A+ LF KM    +LP  +
Sbjct: 1393 NRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSY 1440



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 1/309 (0%)

Query: 234  FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
             +  L  +  +D A+     M ++ ++P+V T + +++ FC++G I+ A E+   M   G
Sbjct: 1200 LIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSG 1259

Query: 294  FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             + +   Y+TLI   C  G ++ AMK   +M  NG   +  T N L+   C+ GKL EA 
Sbjct: 1260 LVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAE 1319

Query: 354  RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +    M    + PN +TY+ +INGYG +G+     S +++M++ G      TY +L+ GL
Sbjct: 1320 KFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGL 1379

Query: 414  CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            CK G   +A   +  L       ++  Y+ L+   C   N   A  L+  M+++   P+ 
Sbjct: 1380 CKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDS 1439

Query: 474  HIFEMLMSTFCQNEDFDRAAEVL-LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            + +  L++  C+      A  +    M    + P+ ++ + L  GL   G  + A   F 
Sbjct: 1440 YTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFE 1499

Query: 533  KMEIRGLLP 541
            +M  +G  P
Sbjct: 1500 EMMKKGTCP 1508



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 1/366 (0%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            +++  L   +        A   +  M   G      +CN  +SSL    ++  A  F   
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M R  + PN  T + +++ +  +G    A   F +M   G  PS  TY +L+ G C  G 
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A KF N +       + + +NTL+   CK G LHEA  +F +M   NV P+  TY++
Sbjct: 1385 LVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSS 1444

Query: 374  LINGYGQVGNSEMGASLY-EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L+ G  + G +     L+   M R  +  + + Y  L+ GL K G  K A Y  +++ K 
Sbjct: 1445 LLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKK 1504

Query: 433  SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
               P+   ++A+I     R    +A   + +M   G  PN   + +L+  F + +   R 
Sbjct: 1505 GTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRY 1564

Query: 493  AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
              +   M+ + + PD +    L  GL   G  +L +KL  KM + G L   F     IN 
Sbjct: 1565 LSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINK 1624

Query: 553  APENGE 558
              E+G+
Sbjct: 1625 YSESGK 1630



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 146/346 (42%), Gaps = 36/346 (10%)

Query: 232  NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            N  L+    S  +  A+  + +M +N + P+ YT + ++   C+ G    AV +F     
Sbjct: 1408 NTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMG 1467

Query: 292  MG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G   P+   Y  L+ G    G    A  F   M K G  P+ + FN +I    ++G++ 
Sbjct: 1468 RGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMM 1527

Query: 351  EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            +AN  FS M+   V PN+ TYN L++G+ +        SLY  M+R GI  D LT+++LI
Sbjct: 1528 KANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLI 1587

Query: 411  LGLCKEG-----------------------------------KTKKAAYLVKDLDKNSLV 435
            LGL K G                                   K +KA  LV  ++   + 
Sbjct: 1588 LGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVF 1647

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            P+  TY+ +  G   +     +  +   M+ +G  P    +  L++  C+  D   A ++
Sbjct: 1648 PDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKL 1707

Query: 496  LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EM         +  S +  GL HCGK E AM +   M    LLP
Sbjct: 1708 KDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLP 1753



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 150/350 (42%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + F+ +  + + R +   A D F  MR +G  P + + N  L      + +   L  Y  
Sbjct: 1511 VAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYST 1570

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M R  I P+  T + ++    K GI +  V++   M   G +    T+N LI+ +   G 
Sbjct: 1571 MMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGK 1630

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A    N M   G+ P+  T+N +  G  KK    E+  +  EM    V P    Y T
Sbjct: 1631 MRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYIT 1690

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LING  +VG+ +    L +EM   G     +  +A++ GL   GKT+ A  ++  + +  
Sbjct: 1691 LINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMR 1750

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            L+P  +T++ L+   C       A +L   M   G + +   + +L+   C N D   A 
Sbjct: 1751 LLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAF 1810

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            E+  EM  + + P+    + L   +          KL   ++ RGL+  G
Sbjct: 1811 ELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWG 1860



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 142/327 (43%), Gaps = 2/327 (0%)

Query: 216  FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
            F +M   G  P   + N  + S     ++  A  F+  MR   + PN+ T N+++H F K
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 276  LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
               + R + ++  M   G  P   T+++LI G    G+  L +K    M   G   +  T
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 1617

Query: 336  FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            FN LI  + + GK+ +A  + + M    V P+  TYN + NG  +         +  EML
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 396  RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             NG+      Y  LI G+C+ G  + A  L  +++      +    SA++ G      +E
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 456  RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSEL 514
             A  +   M+R    P    F  LM  FC++     A + L  ++E C +  D +  + L
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMELCGLKLDVVAYNVL 1796

Query: 515  YSGLHHCGKDELAMKLFRKMEIRGLLP 541
              G+   G    A +L+ +M  R L P
Sbjct: 1797 IMGMCANGDSAAAFELYEEMRHRDLCP 1823



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 102/207 (49%)

Query: 335  TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
             F+ LI  + K+G +  A   F  +      P+V T N ++    +   +E+  SL+ EM
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 395  LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
               GI  ++ T+N LI GLC EG  KKA  L+K +++N  VP   TY+ L+   C +   
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 455  ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            + A +L   MI  G   +   + + +   C N    +A  +L +M ++ ++P+ +  + L
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 515  YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +G    GK  +A ++F +M    L P
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSP 1122



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 50/398 (12%)

Query: 197  DLLFKTYAHRKKFRNATDTFCQMRDYGFLP--IIESC--NKFLSSLLDSERVDIALGFYK 252
            ++L  +     K   A    C M   G +P  I   C  N +  S+ D      A  F+ 
Sbjct: 1303 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY-GSIGDPLN---AFSFFD 1358

Query: 253  EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT---TYNTLISGHC 309
            +M +    P+ +T   ++   CK G     VE  K +  + +IP       YNTL++  C
Sbjct: 1359 DMIKCGQHPSFFTYGSLLKGLCKGG---NLVEAKKFLNRLHYIPGAVDSVMYNTLLAETC 1415

Query: 310  NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF-SEMKATNVSPNV 368
              G L  A+   + M +N + P+  T+++L+ G C+KGK   A  +F + M    + PN 
Sbjct: 1416 KSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNH 1475

Query: 369  VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD-------------------------- 402
            V Y  L++G  + G+ +     +EEM++ G   D                          
Sbjct: 1476 VMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFST 1535

Query: 403  ---------ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                     + TYN L+ G  K+    +   L   + +  + P+  T+ +LI G      
Sbjct: 1536 MRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGI 1595

Query: 454  SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             +   +L   MI  G   ++  F +L++ + ++    +A +++  M    + PD    + 
Sbjct: 1596 PDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNH 1655

Query: 514  LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +++GL+       +  +  +M   G++PK    +  IN
Sbjct: 1656 IFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLIN 1693


>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           lycioides]
          Length = 397

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 201/370 (54%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H+L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 1   TLDSYCTMIHLLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 60

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 61  LITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G +    
Sbjct: 121 YPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGF 180

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 181 RLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGH 240

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 300

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ E +  A +VL E
Sbjct: 301 ITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLRE 360

Query: 499 MLEKCMAPDS 508
           ML   + PD+
Sbjct: 361 MLSVGLKPDT 370



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 126/301 (41%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A E ++      F     T   ++          L   F 
Sbjct: 54  DIYVFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 113

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN L+  FCK+G +  A  +F+ +    + P+VV++NTL+NGY ++
Sbjct: 114 EEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRL 173

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 174 GDMDEGFRLKNAMHASGVQ-----------------------------------PDVYTY 198

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A +++  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 199 SVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 258

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + + PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E+
Sbjct: 259 QSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 318

Query: 562 G 562
            
Sbjct: 319 A 319


>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           origanoides]
          Length = 431

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 217/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++ F  ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASXVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV + NT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K++M  +G+QP+V T++ LI G CK+ K+ +AN  F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ D+    L P+  TY+ LI G C   + + AF+  K MI+   R +  ++  L+S  
Sbjct: 303 DLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G  P
Sbjct: 363 CQEGRSVDAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 420



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            +    M    + P++IT+NTLI+G CKKG L +A+ +  +M    + P+ +TY TLIBG
Sbjct: 267 KEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 113/225 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            E++K M S   +P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 267 KEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBG 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML   +K D
Sbjct: 327 CCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++   P+  TY+ L+ G
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 111/217 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A   YK+M 
Sbjct: 215 YSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++  +M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLD 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 335 SAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLKPDTGTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 395 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 122/301 (40%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++            T   ++          L   F 
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKLKYFKLVWGFY 130

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+ NTL+NGY ++
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRL 190

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   ML +G++                                   P+  TY
Sbjct: 191 GDLDEGFRLKSVMLASGVQ-----------------------------------PDVYTY 215

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A + +  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 216 SVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAKEIYKQMLS 275

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + + PD I  + L  GL   G  + A  L   M ++GL P        IB   + G+ +S
Sbjct: 276 QSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLIBGCCKEGDLDS 335

Query: 562 G 562
            
Sbjct: 336 A 336


>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
           [Coelocarpum swinglei]
          Length = 429

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 218/418 (52%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+     S+   TL ++  ++H L  ++    ++++++ ++     +  S +F +IL
Sbjct: 1   FFTWLSFPTNSTFRHTLHSYCTMIHFLCTHQMLPEAKNLIQVVVSRKGKNSASAVFAAIL 60

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 61  ETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKY 120

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +   FYKE+       ++Y  N++MH FCK G I  A+ VF  +   G  PSV ++NT
Sbjct: 121 FKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNT 180

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 181 LMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKG 240

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 300

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  +Y+ LI G C   + E AF+  K MI+   R +   +  L+S  
Sbjct: 301 DLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGL 360

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 CQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 418



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    +  IL     C   +S   F+
Sbjct: 89  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFYKEIL----ECGYPASLYFFN 144

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 145 ILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 204

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 264

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM+   + P+ ++Y TLI+G
Sbjct: 265 MEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDG 324

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 325 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPD 384

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +     +L K M R G  P+   + +LM+
Sbjct: 385 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 428



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 118/266 (44%)

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            +  ++ LI+ +   G L  A++   L  ++       T   ++    K          +
Sbjct: 69  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWXFY 128

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            E+       ++  +N L++ + + G+  +  S+++ + + G++  ++++N L+ G  + 
Sbjct: 129 KEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYIRL 188

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +   L   +  + + P+  TYS LI G C     + A +L+  M+  G  PN   F
Sbjct: 189 GDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTF 248

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+   C+N   D A EV  +ML + ++PD I  + L  GL   G  + A  L  +M +
Sbjct: 249 TTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRM 308

Query: 537 RGLLPKGFDKLRTINCAPENGEKESG 562
           +GL P        I+   + G+ E+ 
Sbjct: 309 KGLKPDKISYTTLIDGCCKEGDLETA 334


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 225/455 (49%), Gaps = 11/455 (2%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           W KL    T + P  +   L+  + D  L L +++W+  +   S++LE    +LH L   
Sbjct: 55  WSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANA 114

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS---SPLVFDLLFKTYAHRKKFR 210
           +++    S L G + + S         SI ++  MCD+   + ++ D+L   YA+  +F 
Sbjct: 115 KRYSKIRSFLDGFVRNGS----DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFE 170

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
              + F +   YG+     SC   + +LL   R       YKEM R +I PNV+T N+V+
Sbjct: 171 LGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVI 230

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC---NKGLLSLAMKFKNLMEKN 327
           +A CK G + +A +V ++M+  G  P+V +YNTLI G+C     G +  A      M +N
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PN+ TFN LI GF K   L  + ++F EM   +V PNV++YN+LING    G     
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S+ ++M+  G++ +++TYNALI G CK    K+A  +   +     VP    Y+ LI  
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     +  F L + M R G  P+   +  L++  C+N + + AA+ L + L     PD
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE-AAKKLFDQLTSKGLPD 469

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +    L  G    G+   A  L ++M   GL P+
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 39/300 (13%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D++L      D SP    F++L   +        +   F +M D    P + S N  ++ 
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L +  ++  A+    +M    + PN+ T N +++ FCK  +++ A+++F +++  G +P+
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
              YN LI  +C  G +      K  ME+ GI P+V T+N LI G C+ G +  A ++F 
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           ++ +  + P++VT++ L+ GY + G S   A L +EM + G+K   LTYN ++ G CKEG
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519

Query: 418 KTKKAAYLVKDLDKN------------------------------------SLVPNASTY 441
             K A  +   ++K                                      LVPN  TY
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 142/490 (28%), Positives = 241/490 (49%), Gaps = 12/490 (2%)

Query: 63  PIPIPHRTLPEPKGQDLDFVNIAYSHL----IHSDWKKLTALSTHLTPFRVKHVLLKVQK 118
           P P P  +   P   D D V    + L    +    + L    +   P  +  VL+ ++ 
Sbjct: 32  PRPFPDYSPRNPSISDTDLVRRVTTTLKRRHLEPFRRVLKPYESRFKPSHLIWVLINLKN 91

Query: 119 DYVLSLEFFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS 176
           DY L L  F W ++        TLE+  IV+H+   +   ++++ ++         D+ S
Sbjct: 92  DYPLVLNLFNWAKSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPKIDV-S 150

Query: 177 KLF----DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           K F    + ++Y+Y+   S PLVFDL F+          A   F ++  YG +  ++SCN
Sbjct: 151 KSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCN 210

Query: 233 KFLSSL-LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            FLS L  + E + IA+  ++E     +  N  + N+V+H  C+LG +  A  +   M  
Sbjct: 211 LFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTD 270

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V +Y  ++SG+C  G L   +K  + ++  G++P+   +N +I   CK G++ E
Sbjct: 271 RGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVE 330

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++   M+   V P+ V Y T+I+G+ ++GN      L++EM R  I  DI+TY ++I 
Sbjct: 331 AEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIH 390

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G+CK GK  +A  +  ++    L P+  TY+ALI G C     + AF ++  M++ G  P
Sbjct: 391 GICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTP 450

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  L    C+N + D A E+L EM  K + P+    + + +GL   G  E  +KL 
Sbjct: 451 NVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLM 510

Query: 532 RKMEIRGLLP 541
            +M++ G  P
Sbjct: 511 EEMDLAGFYP 520



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 175/351 (49%), Gaps = 2/351 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K R A +   QM D G  P + S    +S       +D  L    E++   + P+ Y  N
Sbjct: 257 KVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYN 316

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G +  A ++ + M   G  P    Y T+ISG C  G +S A K  + M + 
Sbjct: 317 NIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRK 376

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            I P+++T+ ++I G CK GK+ EA  +F+EM    + P+ VTY  LI+GY + G  +  
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S++ +M++ G+  +++TY AL  GLCK G+   A  L+ ++ +  L PN  TY+ ++ G
Sbjct: 437 FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C   N E+  +L + M  +G  P+   +  LM  +C+  +  +A E+L  ML K + P 
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCAPEN 556
            +  + L +G    G  E   +L   M  +G++P    F+ L    C   N
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 152/326 (46%), Gaps = 5/326 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR +G  P        +S       V  A   + EMRR +I P++ T   V+H  CK G 
Sbjct: 338 MRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGK 397

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A E+F  M   G  P   TY  LI G+C  G +  A    N M + G+ PNV+T+  
Sbjct: 398 MVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTA 457

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L  G CK G++  AN +  EM    + PNV TYNT++NG  ++GN E    L EEM   G
Sbjct: 458 LADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAG 517

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D +TY  L+   CK G+  KA  L++ +    L P   T++ L+ G C+    E   
Sbjct: 518 FYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE 577

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L + M+  G  PN   F  LM  +C   +     E+   M ++ + PDS   + L  G 
Sbjct: 578 RLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG- 636

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
            HC    +    F   E   ++ KG+
Sbjct: 637 -HCKARNMKEAWFLHKE---MVEKGY 658



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 191/415 (46%), Gaps = 20/415 (4%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           ++ +L KN +   +E +LRG+     F       D+++Y+             +   +  
Sbjct: 318 IILLLCKNGEVVEAEQLLRGMRKWGVFP------DNVVYT------------TVISGFCK 359

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
                 A   F +MR    +P I +    +  +  S ++  A   + EM    + P+  T
Sbjct: 360 LGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVT 419

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
              ++  +CK G ++ A  V   M   G  P+V TY  L  G C  G + +A +  + M 
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           + G+QPNV T+NT++ G CK G + +  ++  EM      P+ +TY TL++ Y ++G   
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L   ML   ++  ++T+N L+ G C  G  +    L++ + +  ++PNA+T+++L+
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C++ N     ++YK+M   G  P+ + + +L+   C+  +   A  +  EM+EK  +
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCAPENGE 558
             +     L  G +   K   A KLF +M   GL+ +   +D    +N    N E
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWE 714



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ GI  S       ++F+ +L   +  +   + +  L   Y    + + A     QM 
Sbjct: 387 SVIHGICKSGKMVEAREMFNEMLV--KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMV 444

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +       L  +  +D+A     EM R  + PNVYT N +++  CK+G IE
Sbjct: 445 QKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           + V++ + M+  GF P   TY TL+  +C  G ++ A +   +M    +QP ++TFN L+
Sbjct: 505 QTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLM 564

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC  G L +  R+   M    + PN  T+N+L+  Y    N      +Y+ M   G+ 
Sbjct: 565 NGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVM 624

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TYN LI G CK    K+A +L K++ +      A+TY ALI G   RK    A +L
Sbjct: 625 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKL 684

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           ++ M + G    K I+++ +    +  ++    E+ LE+ ++ M
Sbjct: 685 FEEMRKHGLVAEKDIYDIFVDVNYEEGNW----EITLELCDEFM 724



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 154/323 (47%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A + F +M   G  P   +    +     +  +  A   + +M +  ++PNV T  
Sbjct: 397 KMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYT 456

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +    CK G I+ A E+   M   G  P+V TYNT+++G C  G +   +K    M+  
Sbjct: 457 ALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLA 516

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G  P+ IT+ TL+  +CK G++ +A+ +   M    + P +VT+N L+NG+   G  E G
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG 576

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L E ML  GI  +  T+N+L+   C +   +    + K +    ++P+++TY+ LI G
Sbjct: 577 ERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKG 636

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C  +N + A+ L+K M+  G       ++ L+  F + + F  A ++  EM +  +  +
Sbjct: 637 HCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAE 696

Query: 508 SIILSELYSGLHHCGKDELAMKL 530
             I        +  G  E+ ++L
Sbjct: 697 KDIYDIFVDVNYEEGNWEITLEL 719



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 87/219 (39%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y    +   A +    M +    P + + N  ++    S  ++      + 
Sbjct: 523 ITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEW 582

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I PN  T N +M  +C    +    E++K M   G +P   TYN LI GHC    
Sbjct: 583 MLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARN 642

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M + G      T++ LI GF K+ K  EA ++F EM+   +      Y+ 
Sbjct: 643 MKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDI 702

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++   + GN E+   L +E +        + Y    +G
Sbjct: 703 FVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFFIG 741


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/497 (28%), Positives = 250/497 (50%), Gaps = 19/497 (3%)

Query: 63  PIPIPHRTLPEPKGQDL----DFVNIAYSHLIHSDWKKL---TALSTHLTPFRVKHVLLK 115
           P PI H+       Q L    D V    + L   +W+ L   + +   L    ++ V+L+
Sbjct: 4   PRPISHKAASFSSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ 63

Query: 116 VQ-KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN----RKFKSSESILRGIL-DS 169
            Q  D    L FF W Q HK  + T +    VL  L  N      +  +  +++ I+ +S
Sbjct: 64  NQVGDPKRLLNFFYWSQ-HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNS 122

Query: 170 DSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           DS   P  +  SI+  YR C+ SP  ++FD+L  +Y        A + F   +++ F P 
Sbjct: 123 DS---PLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPS 179

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + SCN  L  LL   +V++    +  M  +++ P+VYT   ++ A CK+G ++ A  V  
Sbjct: 180 LLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLL 239

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P++ TYN +I G C   LL  A++ K  M   G+ P++ T++ LI GFC + 
Sbjct: 240 EMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 299

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +  EA  +  EM    + P  +TYN LI+G+ + G+ E    + +EM+  GI+ +++ +N
Sbjct: 300 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ G+CK GK +KA  +++++ +  + P++ TYS LI G C  +N  RAF+L   M + 
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
              P    + ++++  C+  +      +L EM+   + P++++ + L +     G+ E +
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479

Query: 528 MKLFRKMEIRGLLPKGF 544
             +  +M  +G+LP  F
Sbjct: 480 RMILERMREQGILPDVF 496



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 190/351 (54%), Gaps = 3/351 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + +V+  L   +A   +   +     +MR+ G LP +   N  +     ++R++ A  + 
Sbjct: 459 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 518

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM   R+ PN +T    +  + K G +E A   F  M S G +P+V  Y  LI GHC +
Sbjct: 519 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 578

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G ++ A   F+ ++ +  +Q +V T++ LI G  + GK+HEA  IFSE++   + PN  T
Sbjct: 579 GNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 637

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+LI+G  + GN +  + L EEM   GI  DI+TYN LI GLCK G+ ++A  L  D++
Sbjct: 638 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 697

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L PN  TY+A++ G C  KN   AFQL + M+  G  P+  I+ ++++  C+ E F+
Sbjct: 698 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 757

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A ++  EMLEK  A  ++  + L  G    GK + A  L  +M  +  +P
Sbjct: 758 KALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIP 807



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 195/431 (45%), Gaps = 20/431 (4%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
            K  S  L T+++++  L + R    +  + R ++D        K     LY+Y      
Sbjct: 243 EKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVD--------KGLVPDLYTY------ 288

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
               D+L   +   K+ R A     +M D G  P   + N  +   +    ++ A     
Sbjct: 289 ----DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKD 344

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM    I  N+   N +++  CK G +E+A+E+ + M   G  P   TY+ LI GHC   
Sbjct: 345 EMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQ 404

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            ++ A +  + M+K  + P V+T++ +I G C+ G L   N I  EM    + PN V Y 
Sbjct: 405 NMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYT 464

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL+  + + G  E    + E M   GI  D+  YN+LI+G CK  + ++A   + ++ + 
Sbjct: 465 TLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLER 524

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L PNA TY A I G       E A + +  M+  G  PN  I+  L+   C+  +   A
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF--DKLRTI 550
             V   +L + +  D    S L  GL   GK   A  +F +++ +GLLP  F  + L + 
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISG 644

Query: 551 NCAPENGEKES 561
           +C   N +K S
Sbjct: 645 SCKQGNVDKAS 655



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 170/352 (48%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ ++++ L        K   A +   +M + G  P  ++ +  +      + +  A  
Sbjct: 352 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 411

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM++ +++P V T +++++  C+ G ++    + + M   G  P+   Y TL++ H 
Sbjct: 412 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 471

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +  +      M + GI P+V  +N+LI GFCK  ++ EA     EM    + PN  
Sbjct: 472 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 531

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY   I+GY + G  E+    + EML  G+  ++  Y ALI G CKEG   +A  + + +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               ++ +  TYS LI G         AF ++  +   G  PN   +  L+S  C+  + 
Sbjct: 592 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 651

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+A+++L EM  K + PD +  + L  GL   G+ E A  LF  +E RGL P
Sbjct: 652 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 159/339 (46%), Gaps = 1/339 (0%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y+   +   A   F +M   G LP +      +        V  A   ++ +   R+  +
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T ++++H   + G +  A  +F  ++  G +P+  TYN+LISG C +G +  A +   
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI P+++T+N LI G CK G++  A  +F +++   ++PN VTY  +++GY +  
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N      L EEML  G+  D   YN ++   CKE K +KA  L +++ +       S ++
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS-FN 778

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI G C     + A  L + MI     PN   +  L+   C+      A  + LEM E+
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + P +   + L  G H+ G       LF +M  +G+ P
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEP 877



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 187/414 (45%), Gaps = 22/414 (5%)

Query: 140  LETHSIVLHILTKNRKFKSS-------------------ESILRGILDSDSFDLPSKLFD 180
            ++T+S+++H L++N K   +                    S++ G     + D  S+L +
Sbjct: 600  VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 181  SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
             +    +  +   + +++L        +   A + F  +   G  P   +    +     
Sbjct: 660  EM--CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 717

Query: 241  SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
            S+    A    +EM    + P+ +  N++++  CK    E+A+++F+ M   GF  S  +
Sbjct: 718  SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVS 776

Query: 301  YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            +NTLI G+C  G L  A      M +    PN +T+ +LI   CK G + EA R++ EM+
Sbjct: 777  FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836

Query: 361  ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              NV P   TY +L++GY  +GN    ++L+EEM+  GI+ D +TY  +I   C+EG   
Sbjct: 837  ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896

Query: 421  KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            +A  L  ++    +  + + Y ALI   C ++      +L   +  SG R       ++ 
Sbjct: 897  EACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956

Query: 481  STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              F    + D AAEVL  M++     ++  L +L  G  +    E +  L ++M
Sbjct: 957  RGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 240/467 (51%), Gaps = 19/467 (4%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKP----SSLTLETHSIVLHILTKNRKFKS 158
            L P  V  VL + + D  L   F   +  + P    +SL+L   S ++HIL ++ +   
Sbjct: 65  RLNPLAVVEVLYRCRNDLSLGQRFVDQLGFNFPNFKHTSLSL---SAMIHILVRSGRLSD 121

Query: 159 SES-ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++S +LR I  S    +  ++ +S++ +Y  C S+  VFDLL +T+   +K R A + F 
Sbjct: 122 AQSCVLRMIRRSGVSRV--EIVNSLVSTYSNCGSNDSVFDLLIRTFVQARKLREAYEAFT 179

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +R  G+   I++CN  + SL+    V++A   Y+E+ R+ +  NVYTLN++++A CK G
Sbjct: 180 LLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDG 239

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E+       ++  G  P + TYNTLIS + ++GL+  A +  + M   G  P V T+N
Sbjct: 240 KMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYN 299

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I G CK GK   A  +F+EM  + +SP+  TY +L+    + G++    +++ +M   
Sbjct: 300 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSR 359

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++ +++++    + G   KA      + +  L+P+   Y+ LI G C +     A
Sbjct: 360 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEA 419

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M++ GC  +   +  ++   C+ +    A ++  EM E+ + PDS  L+ L  G
Sbjct: 420 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDG 479

Query: 518 LHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTINCAPE 555
               G  + AM+LF+KM+ + +         L  GF K+  I+ A E
Sbjct: 480 HCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKE 526



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 186/381 (48%), Gaps = 28/381 (7%)

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP------- 226
           +PSK F   +Y+Y          + +        K+  A + F +M   G  P       
Sbjct: 286 MPSKGFSPGVYTY----------NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 335

Query: 227 -IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
            ++E+C K     +++E +      + +MR   + P++   + +M  F + G +++A+  
Sbjct: 336 LLMEACKK--GDAVETENI------FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 387

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F +++  G IP    Y  LI G+C KG++S AM  +N M + G   +V+T+NT++ G CK
Sbjct: 388 FNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCK 447

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +  L EA+++F+EM    + P+  T   LI+G+ ++GN +    L+++M    IK+D++T
Sbjct: 448 RKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVT 507

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ G  K G    A  +  D+    ++P   ++S L+   C + +   AF+++  MI
Sbjct: 508 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI 567

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
               +P   I   ++  +C++ +       L +M+ +   PD I  + L  G        
Sbjct: 568 SKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMS 627

Query: 526 LAMKLFRKMEIR--GLLPKGF 544
            A  L +KME +  GL+P  F
Sbjct: 628 KAFGLVKKMEEKQGGLVPDVF 648



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 157/316 (49%), Gaps = 2/316 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L + Y  +     A +   +M   G    + + N  L  L   + +  A   + E
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YTL +++   CKLG ++ A+E+FK M+       V TYNTL+ G    G 
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M    I P  I+F+ L+   C KG L EA R++ EM + ++ P V+  N+
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD--K 431
           +I GY + GN+  G    E+M+  G   D ++YN LI G  KE    KA  LVK ++  +
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+  TY++++ G C     + A  + + MI  G  P++  +  L++ F   ++   
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700

Query: 492 AAEVLLEMLEKCMAPD 507
           A     EML++  +PD
Sbjct: 701 AFRFHDEMLQRGFSPD 716



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 146/286 (51%), Gaps = 2/286 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +      RK    A   F +M + G  P   +    +        +  A+
Sbjct: 431 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAM 490

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K+M+  RI  +V T N ++  F K+G I+ A E++ +M S   +P+  +++ L++  
Sbjct: 491 ELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNAL 550

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+KG LS A +  + M    I+P V+  N++I G+C+ G   +      +M +    P+ 
Sbjct: 551 CSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDC 610

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEM--LRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++YNTLI G+ +  N      L ++M   + G+  D+ TYN+++ G C+E + K+A  ++
Sbjct: 611 ISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVL 670

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + + +  + P+ STY++LI G   + N   AF+ +  M++ G  P+
Sbjct: 671 RKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 107/252 (42%), Gaps = 26/252 (10%)

Query: 314 LSLAMKFKNLMEKN--GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           LSL  +F + +  N    +   ++ + +I    + G+L +A      M   +    V   
Sbjct: 82  LSLGQRFVDQLGFNFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIV 141

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL--TYNALILGLCKEGKTKKAAYLVKDL 429
           N+L++ Y   G+++   S+++ ++R  ++   L   Y A  L        +   Y V   
Sbjct: 142 NSLVSTYSNCGSND---SVFDLLIRTFVQARKLREAYEAFTL-------LRSKGYTVSID 191

Query: 430 DKNSLVPNASTYSALITGQCVRKN-SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             N+L+           G  VR    E A+++Y+ + RSG   N +   ++++  C++  
Sbjct: 192 ACNALI-----------GSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGK 240

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            ++    L E+ EK + PD +  + L S     G  E A +L   M  +G  P  +    
Sbjct: 241 MEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNT 300

Query: 549 TINCAPENGEKE 560
            IN   ++G+ E
Sbjct: 301 VINGLCKHGKYE 312


>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 731

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 235/461 (50%), Gaps = 13/461 (2%)

Query: 89  LIHSDWKKLTA--LSTHLTPFRVKHVLLKVQK---DYVLSLEFFTWVQTHKPSSLTLETH 143
           ++  DW  L     ++ LT   +  V+L +++   +      FF W Q+    + +L + 
Sbjct: 22  IVKGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYTHSLHSS 81

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
             ++H+LTK+R FK+++ +L  +   +    PS L  S++  +   + +  V   +   Y
Sbjct: 82  WSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVL-TSLVRIHDDPEVNSHVLSWIVIHY 140

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           A  K   +A   F QM      P + +C   ++SLL      +    YK M ++ + PN+
Sbjct: 141 AKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNI 200

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           Y  N ++HA  K   +ERA  +   ME  G +P + TYNTLI+ +C KGL   A+  ++ 
Sbjct: 201 YVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDK 260

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           ME+ GI  +++++N+LI+GFCK+GK+ EA R+F E+K  +  PN VTY TLI+GY +   
Sbjct: 261 MEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEIK--DAIPNHVTYTTLIDGYCKANE 318

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            E    L E M+  G+   ++TYN+++  LC +G+ + A  L+ ++ +  +  ++ T + 
Sbjct: 319 FEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNT 378

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI   C   +   A +    M+ +G  PN   ++ L+  FC+  + + A E+L  ML+  
Sbjct: 379 LINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAG 438

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +P+    S +     +C KD     L    E    L KGF
Sbjct: 439 FSPNYRTYSWIVDS--YCKKDNTDAVLALPDE---FLSKGF 474



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N + L+ ++  + K  +   AV+VF+ M      P +     L++     G+ S+  K  
Sbjct: 129 NSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVY 188

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M ++G+ PN+  +N LI    K   +  A  I +EM+   V P++ TYNTLI  Y + 
Sbjct: 189 KRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKK 248

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G      S+ ++M R GI +DI++YN+LI G CKEGK ++A  +  ++     +PN  TY
Sbjct: 249 GLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNHVTY 306

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C     E A +L + M+  G  P    +  ++   C +     A ++L EM E
Sbjct: 307 TTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSE 366

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + +  DS+  + L +     G    A+K   KM   GL P  F     I+   +  E ES
Sbjct: 367 RKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELES 426

Query: 562 G 562
            
Sbjct: 427 A 427



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 105/264 (39%), Gaps = 5/264 (1%)

Query: 190 DSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           D+ P  + +  L   Y    +F  A      M   G  P + + N  L  L    R+  A
Sbjct: 298 DAIPNHVTYTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDA 357

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
                EM   ++  +  T N +++A+CK+G +  A++    M   G  P+  TY  LI G
Sbjct: 358 NKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHG 417

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C    L  A +    M   G  PN  T++ ++  +CKK        +  E  +     N
Sbjct: 418 FCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLN 477

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +  Y  LI    ++   E    L   M   GI  D + Y +L     K G T  A+ +++
Sbjct: 478 ISLYRALIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLE 537

Query: 428 DLDKNSLVPNASTY---SALITGQ 448
           ++ +  L+     Y   SAL   Q
Sbjct: 538 EMARRRLMITVKIYRCFSALDASQ 561


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 193/354 (54%), Gaps = 3/354 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ ++ D+L   YA   + R   + F +  DYG    + SCN  +S L+    +      
Sbjct: 91  ANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFV 150

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           YKEM R RI P + + N+V++  CK+G + +A ++ ++M+  G   +V TYNTLI G+C 
Sbjct: 151 YKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCK 210

Query: 311 KGLLSLAMKFKNL---MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            G +    K   +   M  +GI PN +TFN LI GFCK   +  A ++F+EM    V PN
Sbjct: 211 MGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPN 270

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN+LING    G      +L ++M+ + +K +I+T+NAL+ G CK    K+A  L  
Sbjct: 271 VVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFD 330

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+ K  + PN +TY+ LI   C  +N E AF LY+ M+  G  P+   +  L++  C+  
Sbjct: 331 DMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKG 390

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D + A  ++ EM  K +  D I  + L   L + G+ + A++L  +M  +GL P
Sbjct: 391 DLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKP 444



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 183/361 (50%), Gaps = 9/361 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + F+++        K   A D    M+  G    + + N  +       ++  
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 247 ---ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A    KEMR + I PN  T N+++  FCK   +  A++VF  M   G  P+V TYN+
Sbjct: 217 MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G CN G ++ A   ++ M  + ++PN+IT N L+ GFCK   + +A  +F +M    
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           ++PNV TYN LI+ Y +  N E   +LY  ML  G+  D+ TYN LI GLC++G  + A 
Sbjct: 337 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAAR 396

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            LV ++D   L  +  TY+ LI   C +   ++A +L   M R G +P++  +  ++  +
Sbjct: 397 NLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGY 456

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSI-ILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
           C+  +  RAA  L   +EK     ++   + L  G   C KD+L  A  L  +M  +GL+
Sbjct: 457 CKEGNL-RAALNLRSQMEKVGRLANVATYNVLIKGF--CKKDKLEDANGLLNEMLEKGLI 513

Query: 541 P 541
           P
Sbjct: 514 P 514



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 162/330 (49%), Gaps = 18/330 (5%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D+IL   R     P  + F++L   +   K    A   F +M   G  P + + N  ++ 
Sbjct: 221 DAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLING 280

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L ++ +V+ A     +M  + + PN+ T N +++ FCK  ++++A E+F +M   G  P+
Sbjct: 281 LCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           VTTYN LI  +C    +  A     +M   G+ P+V T+N LI G C+KG L  A  + S
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM   ++  +++TYN LI+     G  +    L +EM R G+K   LTYN +I G CKEG
Sbjct: 401 EMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEG 460

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             + A  L   ++K   + N +TY+ LI G C +   E A  L   M+  G  PN+  +E
Sbjct: 461 NLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYE 520

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           +                V  EM+EK   PD
Sbjct: 521 I----------------VTEEMMEKGFVPD 534



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 38/223 (17%)

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            E  +I   +   +   N +  + L+  Y +   + +G   ++     G+K+ + + N L
Sbjct: 75  QEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134

Query: 410 ILG-----------------------------------LCKEGKTKKAAYLVKDLDKNSL 434
           + G                                   LCK GK  KA  +++D+    +
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194

Query: 435 VPNASTYSALITGQCVRKNSERAFQ---LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             N  TY+ LI G C      + ++   + K M   G  PN+  F +L+  FC++++   
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           A +V  EM  + + P+ +  + L +GL + GK   A  L  +M
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQM 297


>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           filifolia]
          Length = 431

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 217/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R+       ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN++F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKA 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAN 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTRENKLCVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A ++F  M     +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +AN +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430


>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
           inaguensis]
          Length = 431

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 219/424 (51%), Gaps = 14/424 (3%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+    
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI G+ + G  ++   +Y+ ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 XLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIR 537
           CQ      A ++L EML   + PD    ++I++E       C K ++    KL ++M+  
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEF------CKKGDVWKGSKLLKEMQRN 416

Query: 538 GLLP 541
           G +P
Sbjct: 417 GHVP 420



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G IP+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 267 MEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 387 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMN 430



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 71  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLRYFKLVWG 128

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++                                   P+  
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQ-----------------------------------PDVY 213

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+   M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXM 273

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 274 LSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 333

Query: 560 ESG 562
           ++ 
Sbjct: 334 DTA 336


>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
          Length = 418

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 208/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S++R ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLVEAKSLIRVVVSRKGKDSTSAVFAAILETKGTQISDLYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A   F   + +      ++C K L  L+      +  GFYKE+    
Sbjct: 72  LMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++Y  N++MH FCK G +  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M   G+QP+V T++ LI G CK+ K+ EAN + +EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML  G   D++TYN LI GLC+ G   +A  LV+++    L P+ 
Sbjct: 252 CKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E  F+L K MIR   R ++  +  L+S  C+      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G  + A KL R+M+  G +P
Sbjct: 372 MLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVP 414



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 128/268 (47%), Gaps = 4/268 (1%)

Query: 174 LPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           L   +FD+I  +S R    S + F+ L   Y               M   G  P + + +
Sbjct: 154 LAQMVFDAITKWSLR---PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYS 210

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++ L    ++D A     EM  N + PN  T   ++   CK G ++ A+E++K M S 
Sbjct: 211 VLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQ 270

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           GF+P + TYNTLI G C +G L  A      M   G++P+ IT+ TLI G CK+G L   
Sbjct: 271 GFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEIT 330

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +   M   N+  + VTY  LI+G  + G +     +  EML  G+K D  TY  ++  
Sbjct: 331 FELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNE 390

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            CK G  K A+ L++++ +N  VP   T
Sbjct: 391 FCKTGDVKTASKLLREMQRNGPVPGVVT 418



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 131/308 (42%), Gaps = 36/308 (11%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           E +  +IS ++Y  + +M A+ + G +  A++ F+  +         T   ++       
Sbjct: 57  ETKGTQIS-DLYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLR 115

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
              L   F   + + G  P++  FN L+  FCK+G++  A  +F  +   ++ P+VV++N
Sbjct: 116 YFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFN 175

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL+NGY ++G+ + G  L   M   G++                                
Sbjct: 176 TLMNGYIRLGDLDEGFRLKSAMHATGVQ-------------------------------- 203

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+  TYS LI G C     + A ++   M+ +G  PN   F  L+   C+N   D A
Sbjct: 204 ---PDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLA 260

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            E+  +ML +   PD I  + L  GL   G    A  L  +M ++GL P        I+ 
Sbjct: 261 MEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDG 320

Query: 553 APENGEKE 560
           + + G+ E
Sbjct: 321 SCKEGDLE 328



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 18/229 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S++++ L K  K   +  +L  +LD+                      + + F  L  
Sbjct: 208 TYSVLINGLCKESKMDEANEMLNEMLDNGLV------------------PNGVTFTTLID 249

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +    K   A + + QM   GFLP + + N  +  L     +  A    +EM    + P
Sbjct: 250 GHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKP 309

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T   ++   CK G +E   E+ K M          TY  LISG C +G    A K  
Sbjct: 310 DKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKML 369

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             M   G++P+  T+  ++  FCK G +  A+++  EM+     P VVT
Sbjct: 370 REMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418


>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           pusilla]
          Length = 431

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 216/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++ F  ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+  T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y+ ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAN 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      +L ++M+  G +P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVP 420



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+ YT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC KG + LA
Sbjct: 207 GVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +AN +  EM    + P+ +TY TLI+G
Sbjct: 267 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMN 430



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/285 (20%), Positives = 111/285 (38%), Gaps = 47/285 (16%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP+  T    +H++C +       ++F   +S+  I  V +          KG  S +  
Sbjct: 9   SPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSL--IQVVVS---------RKGKGSASAV 57

Query: 320 FKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           F  ++E  G Q  ++  F+ LI  + + G L +A   +   +   +     T   ++   
Sbjct: 58  FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHL 117

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++   ++    YEE+L  G    +  +N L+   CK+G  + A                
Sbjct: 118 MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQ--------------- 162

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
                                ++ ++ + G RP+   +  LM+ + +  D D    +   
Sbjct: 163 --------------------SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSA 202

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           ML   + PD    S L +GL    K + A +LF +M ++GL+P G
Sbjct: 203 MLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNG 247


>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia salsoloides]
          Length = 410

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 210/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 4   TLYSYCTMIHFLCTHQMLPEAKSLIQVVVSRKGKGSASAVFAAILETKGTLRSDIYVFSG 63

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFYKE+    
Sbjct: 64  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEILECG 123

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 124 YPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 183

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G++P+V T++ LI G CK+ K+  AN +F EM    + PN VT+ TLI+G+
Sbjct: 184 RLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGH 243

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 244 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDK 303

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +  ++  L+S  CQ      A ++L E
Sbjct: 304 ITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLRE 363

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 364 MLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 406



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     + + +L  ++    F L    +  IL     C   +S   F+
Sbjct: 77  AIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWGFYKEIL----ECGYPASLYFFN 132

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +    + R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 133 ILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 192

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   I+ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 193 GVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 252

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    +  ++IT+NTLI+G CKKG L +A  +  EM+   + P+ +TY TLI+G
Sbjct: 253 MEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDG 312

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y  LI GLC+EG++  A  +++++    L P+
Sbjct: 313 CCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPD 372

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 373 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 407



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 110/222 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 189 MHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGR 248

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S      + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 249 VDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTT 308

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y TLI+G  Q G S     +  EML  G
Sbjct: 309 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVG 368

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K D  TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 369 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 133/308 (43%), Gaps = 37/308 (12%)

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLL 314
           +  +  ++Y  + ++ A+ + G +  A+E ++   E   ++P  T         C K L 
Sbjct: 51  KGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDT---------CKKVLE 101

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L MK K              +  L++GF            + E+       ++  +N L
Sbjct: 102 HL-MKLK--------------YFKLVWGF------------YKEILECGYPASLYFFNIL 134

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + + G   +  S+++ + + G++  ++++N L+ G  + G   +   L   +  + +
Sbjct: 135 MHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGV 194

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E
Sbjct: 195 EPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 254

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           +  +ML + ++ D I  + L  GL   G  + A  L  +M ++GL P        I+   
Sbjct: 255 IYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCC 314

Query: 555 ENGEKESG 562
           + G+ E+ 
Sbjct: 315 KEGDLETA 322


>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
 gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           virgata]
          Length = 418

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 211/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H+L  ++    ++S++R ++        S +F +IL +     S   VF  
Sbjct: 12  TLDSYCTMIHLLCTHQMLSEAKSLIRVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILDCG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ   +  A +VL E
Sbjct: 312 ITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 372 MLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 166/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 85  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----DCGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 141 ILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI+GHC    + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG+   A  +++++    L P+
Sbjct: 321 CCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPD 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 TGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPS 415



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++      F     T   ++          L   F 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             +   G   ++  FN L+  FCK+G +  A  +F+ +    + P+VV++NTL+NGY ++
Sbjct: 125 EEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRL 184

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 185 GDLDEGFRLKSAMHASGVQ-----------------------------------PDVYTY 209

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A  L+  M+  G  PN   F  L++  C+N   D A E+  +ML 
Sbjct: 210 SVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLS 269

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E+
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLET 329

Query: 562 G 562
            
Sbjct: 330 A 330



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 88/210 (41%), Gaps = 35/210 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A   F +M D G +P   +    ++    + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------- 305
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI          
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLE 328

Query: 306 -------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                    SG C +G    A K    M   G++P+  T+  +I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMII 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             FCKKG +   +++  EM+     P+VV+
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418


>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 418

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 217/409 (53%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+FCK G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ KL +AN +F EM    + PN V++ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK G  K+A  L+ ++    L P+ 
Sbjct: 252 CKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    ++        M+ +
Sbjct: 141 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  ++ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CK G L +A  + +EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  +   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C  G L  A    N M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 133/302 (44%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFCK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C++   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+ + + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
           succulentifolia]
          Length = 429

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 223/424 (52%), Gaps = 14/424 (3%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL+++  ++H L  ++    ++++++ ++        S +F +IL
Sbjct: 1   FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  +   Y      R+A + +   +++ F    ++C K L  L+  + 
Sbjct: 61  ETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKY 120

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E        ++Y  N++MH+FCK G I  A  VF  +   G  PSV ++NT
Sbjct: 121 FKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNT 180

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L+   + K  M+ +G+QP+V T++ LI G CK+ K+ + N +F EM    
Sbjct: 181 LMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXG 240

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQ 300

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + E AF+    MI+   R +   +  L+S  
Sbjct: 301 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGL 360

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIR 537
           CQ      A ++L EML   + P+    ++I++E       C K ++    KL ++M+  
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLMKEMQRD 414

Query: 538 GLLP 541
           G +P
Sbjct: 415 GYVP 418



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 89  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 144

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    ++      K M+ +
Sbjct: 145 ILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQAS 204

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++   E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLA 264

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P+++T+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 265 MEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 324

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E        M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 325 SCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 384

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +     +L K M R G  P+   + +LM+
Sbjct: 385 IGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVTYNVLMN 428



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 132/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 69  DIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 118

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 119 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFCK 152

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  K G   +   L K +  + + P+  T
Sbjct: 153 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYT 212

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     +   +L+  M+  G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 213 YSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 272

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD +  + L  GL   G  + A  L  +M ++GL P        I+ + + G+ E
Sbjct: 273 SQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 332

Query: 561 SG 562
           + 
Sbjct: 333 TA 334


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/424 (30%), Positives = 207/424 (48%), Gaps = 6/424 (1%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L FF  + +  P   TL ++  +LH L  +R    + S++  ++     +  S LF SIL
Sbjct: 103 LSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSIL 162

Query: 184 YSY----RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
            +         S  LVFD L   Y       +A   F  +    F   I  C   L  ++
Sbjct: 163 RTMPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVV 222

Query: 240 DSERVDI--ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
               V+I  +   Y E+  +   P +Y  N++MH FCK G +  A  VF  +   G  P+
Sbjct: 223 RLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPT 282

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V ++NTLISG C  G +    + K +ME  G+ P+V TF+ LI G CK+G+L E + +F 
Sbjct: 283 VVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFD 342

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    + PN VT+ TLI+G  + G  ++    ++ ML  G++ D++TYNALI GLCK G
Sbjct: 343 EMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVG 402

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             K+A  LV ++  + L P+  T++ LI G C   + E A ++ + M+  G   +   F 
Sbjct: 403 DLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFT 462

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+S  C+      A  +L +ML     PD    + +       G  ++  KL ++M+  
Sbjct: 463 ALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSD 522

Query: 538 GLLP 541
           G +P
Sbjct: 523 GHVP 526



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 161/322 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +       NA   F ++   G  P + S N  +S    S  V+        M 
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+V+T + +++  CK G ++    +F  M   G +P+  T+ TLI G C  G + 
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+K   +M   G++P+++T+N LI G CK G L EA R+ +EM A+ + P+ +T+ TLI
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G+ E    +   M+  GI++D + + ALI GLC+EG+   A  ++ D+      
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ +I   C + + +  F+L K M   G  P    +  LM+  C+      A  +
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550

Query: 496 LLEMLEKCMAPDSIILSELYSG 517
           L  ML   +AP+ I  + L  G
Sbjct: 551 LDAMLNVGVAPNDITYNILLDG 572



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 46/289 (15%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L        +    +  F +M   G +P   +    +       +VD+AL  ++ M 
Sbjct: 321 FSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMML 380

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK+G ++ A  +   M + G  P   T+ TLI G C  G + 
Sbjct: 381 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDME 440

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS------------------ 357
            A++ K  M + GI+ + + F  LI G C++G++H+A R+ +                  
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVI 500

Query: 358 -----------------EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                            EM++    P VVTYN L+NG  + G  +    L + ML  G+ 
Sbjct: 501 DCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVA 560

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLD----KNSLVPNASTYSALI 445
            + +TYN L+ G  K G +        D+D    +  LV + ++Y+AL+
Sbjct: 561 PNDITYNILLDGHSKHGSS-------VDVDIFNSEKGLVTDYASYTALV 602



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 2/163 (1%)

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSL-VPNASTYSALITGQCVRK-NSERAFQLY 461
           L ++ALI      G T  A    + + KN   VP     + L     +R    ER++ LY
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALY 236

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             ++ SG  P  + F +LM  FC+  D   A  V  E+ ++ + P  +  + L SG    
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           G  E   +L   ME  G+ P  F     IN   + G  + G L
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSL 339


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 197/366 (53%), Gaps = 4/366 (1%)

Query: 180 DSILYSYRMCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           D++   YRM   +P      F     ++A +K++        QM  +G    + S N  +
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     VD A+    +M +  I P   T N +++  C  G I+ AVE+F  M   G  
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHE 190

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V +YNT+I+G C  G  S+A+     ME+NG +P+V+T+NT+I   CK   +++A   
Sbjct: 191 PNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEF 250

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            SEM    + PNV TYN +++G+  +G       L++EM+   +  D +T   L+ GLCK
Sbjct: 251 LSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCK 310

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EG   +A  + + + +  + PN STY+AL+ G C+++    A ++++ MIR GC P  H 
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHS 370

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +L++ FC++   D A  +L EM  K + PD++  S L  GL   G+ + A+ +F++M 
Sbjct: 371 YNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMC 430

Query: 536 IRGLLP 541
             GLLP
Sbjct: 431 SYGLLP 436



 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 174/365 (47%), Gaps = 35/365 (9%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A     +M   G  P   + N  ++ L +  ++  A+  + EM R    PNV + N +++
Sbjct: 142 AVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIIN 201

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    AV+VFK ME  G  P V TYNT+I   C   L++ AM+F + M   GI P
Sbjct: 202 GLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPP 261

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATN---------------------------- 363
           NV T+N ++ GFC  G+L+EA R+F EM   +                            
Sbjct: 262 NVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVF 321

Query: 364 -------VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                  V PN+ TYN L++GY           ++E M+R G    + +YN LI G CK 
Sbjct: 322 ETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKS 381

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +  +A  L+ ++   +L P+  TYS L+ G C     + A  ++K M   G  PN   +
Sbjct: 382 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTY 441

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +L+  FC++   D A ++L  M EK + P+ +  + L  G+   GK E+A +LF K+  
Sbjct: 442 SILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFA 501

Query: 537 RGLLP 541
            G+ P
Sbjct: 502 DGIRP 506



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/330 (32%), Positives = 164/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D F +M   G  P + + N  + SL     V+ A+ F  EM    I PNV+T N ++H
Sbjct: 212 AVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVH 271

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC LG +  A  +FK M     +P   T   L+ G C +G++S A      M + G++P
Sbjct: 272 GFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEP 331

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+ T+N L+ G+C +  ++EA ++F  M     +P V +YN LING+ +    +   SL 
Sbjct: 332 NISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLL 391

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM    +  D +TY+ L+ GLC+ G+ K+A  + K++    L+PN  TYS L+ G C  
Sbjct: 392 AEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKH 451

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + + A +L KSM      PN     +L+         + A E+  ++    + P     
Sbjct: 452 GHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTY 511

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  GL   G  + A  LFRKME  G LP
Sbjct: 512 TVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/300 (30%), Positives = 143/300 (47%), Gaps = 4/300 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D AL  +  M R    P+V      + +F K       V +   M+  G   +V + N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+  C    +  A+     M K GI P   TFN LI G C +GK+ EA  +F+EM    
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             PNV++YNT+ING  + GN+ M   ++++M +NG K D++TYN +I  LCK+     A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
             + ++    + PN  TY+ ++ G C+      A +L+K M+     P+     +L+   
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           C+      A  V   M EK + P+    + L  G  +C +  +  A K+F  M  +G  P
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDG--YCLQRLMNEAKKVFEIMIRQGCAP 366



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 135/273 (49%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F  M + G  P I + N  +        ++ A   ++ M R   +P V++ N++++ FC
Sbjct: 320 VFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFC 379

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K   ++ A  +   M      P   TY+TL+ G C  G    A+     M   G+ PN++
Sbjct: 380 KSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLV 439

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T++ L+ GFCK G L EA ++   M+   + PN+V +  LI G    G  E+   L+ ++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKL 499

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             +GI+  I TY  +I GL KEG + +A  L + ++ +  +PN+ +Y+ +I G    ++S
Sbjct: 500 FADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 559

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
             A +L   M+      N   F+ML+    Q+E
Sbjct: 560 STAIRLIDEMVGKRFSANLSTFQMLLDLESQDE 592



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 119/250 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y  ++    A   F  M   G  P + S N  ++    S R+D A     EM 
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+  T + +M   C+ G  + A+ +FK M S G +P++ TY+ L+ G C  G L 
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K    M++  ++PN++    LI G    GKL  A  +FS++ A  + P + TY  +I
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G  + G S+    L+ +M  +G   +  +YN +I G  +   +  A  L+ ++      
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 575

Query: 436 PNASTYSALI 445
            N ST+  L+
Sbjct: 576 ANLSTFQMLL 585



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 78/167 (46%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           + A + F +M  YG LP + + +  L        +D AL   K M+  ++ PN+    ++
Sbjct: 420 KEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTIL 479

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +      G +E A E+F  + + G  P++ TY  +I G   +GL   A      ME +G 
Sbjct: 480 IEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGF 539

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            PN  ++N +I GF +      A R+  EM     S N+ T+  L++
Sbjct: 540 LPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 29/147 (19%), Positives = 64/147 (43%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   +        A      M++    P I      +  +  + ++++A   + +
Sbjct: 439 VTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + I P + T  +++    K G+ + A ++F+ ME  GF+P+  +YN +I G      
Sbjct: 499 LFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 558

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLI 340
            S A++  + M       N+ TF  L+
Sbjct: 559 SSTAIRLIDEMVGKRFSANLSTFQMLL 585


>gi|15240991|ref|NP_198689.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171307|sp|Q9FKR3.1|PP404_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g38730
 gi|10176899|dbj|BAB10131.1| unnamed protein product [Arabidopsis thaliana]
 gi|332006971|gb|AED94354.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 596

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 221/418 (52%), Gaps = 1/418 (0%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           LS  FF W  +   S  +L++   ++ ILTK++ FK++  +L  +   +    P  L   
Sbjct: 62  LSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSL 121

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +       +    VF  L   YA      ++   F Q+R  G  P +++C   L+SL+  
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ 181

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
              D     +K+M +  +  N++  N+++HA  K G  E+A ++   ME  G  P + TY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NTLIS +C K +   A+  ++ ME++G+ PN++T+N+ I GF ++G++ EA R+F E+K 
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK- 300

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            +V+ N VTY TLI+GY ++ + +    L E M   G    ++TYN+++  LC++G+ ++
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L+ ++    + P+  T + LI   C  ++   A ++ K MI SG + + + ++ L+ 
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            FC+  + + A E L  M+EK  +P     S L  G ++  K +   KL  + E RGL
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 1/346 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+++L    +       A     +M + G  P I + N  +S          AL     M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R+ ++PN+ T N  +H F + G +  A  +F+ ++      +  TY TLI G+C    +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDI 323

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++ + +ME  G  P V+T+N+++   C+ G++ EANR+ +EM    + P+ +T NTL
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           IN Y ++ +      + ++M+ +G+K+D+ +Y ALI G CK  + + A   +  + +   
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P  +TYS L+ G   +   +   +L +   + G   +  ++  L+   C+ E  D A  
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +   M +K +  DS+I + +       GK   A  LF  M  R L+
Sbjct: 504 LFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLM 549



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 9/293 (3%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS----ERVDIALGFYKEMRRNR 258
           ++   + R AT  F +++D      + + +   ++L+D       +D AL   + M    
Sbjct: 283 FSREGRMREATRLFREIKD-----DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
            SP V T N ++   C+ G I  A  +   M      P   T NTLI+ +C    +  A+
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K K  M ++G++ ++ ++  LI GFCK  +L  A      M     SP   TY+ L++G+
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 +    L EE  + G+  D+  Y  LI  +CK  +   A  L + ++K  LV ++
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             ++ +            A  L+  M       N  +++ + +++  + D  R
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLR 570



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 36/278 (12%)

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           +  + +M  + K G+I  ++ VF+ + S G  P +     L++    + L     K    
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M K G+  N+  +N L+    K G   +A ++ SEM+   V P++ TYNTLI+ Y +   
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                S+ + M R+G+  +I+TYN+ I G  +EG+ ++A  L +++ K+ +  N  TY+ 
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTT 312

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G                                   +C+  D D A  +   M  + 
Sbjct: 313 LIDG-----------------------------------YCRMNDIDEALRLREVMESRG 337

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +P  +  + +   L   G+   A +L  +M  + + P
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 17/247 (6%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR +++S  F      ++SIL   ++C+                 + R A     +M   
Sbjct: 329 LREVMESRGFSPGVVTYNSILR--KLCEDG---------------RIREANRLLTEMSGK 371

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
              P   +CN  +++    E +  A+   K+M  + +  ++Y+   ++H FCK+  +E A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            E   +M   GF P   TY+ L+ G  N+       K     EK G+  +V  +  LI  
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK  ++  A  +F  M+   +  + V + T+   Y + G     ++L++ M    + V+
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551

Query: 403 ILTYNAL 409
           +  Y ++
Sbjct: 552 LKLYKSI 558


>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           fucata]
          Length = 414

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 211/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +I  +     S   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIFETKGTQRSDLYVFSG 60

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGH 240

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A +L+ ++    L P+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDK 300

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +  ++  L+S  C+      A ++L E
Sbjct: 301 ITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLRE 360

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 74  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 129

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 130 ILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 189

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   I+ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 190 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 249

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 309

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++   ++D + Y ALI GLC+EG +  A  +++++    L P+
Sbjct: 310 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPD 369

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 370 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 113/225 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 190 GVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLA 249

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 250 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 309

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G L  A      M   N   + V Y  LI+G  + G S     +  EML  G+K D
Sbjct: 310 CCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPD 369

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 370 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 108/217 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 198 YSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M   G  P   TY TLI G C  G L 
Sbjct: 258 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLD 317

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +   + + + +  LI G C++G   +A ++  EM +  + P+  TY  +I
Sbjct: 318 TAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMII 377

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 378 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414


>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
          Length = 418

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 209/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL  +  ++H L  ++    ++S+++ ++        S +F +I  +     S   VF  
Sbjct: 12  TLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 72  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A +L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R ++  +  L S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 372 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 414



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 85  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 141 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y AL  GLC+EG++  A  +++++    L P+
Sbjct: 321 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPD 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           A TY+ +I   C + +  +  +L K M R G  P+
Sbjct: 381 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPS 415



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 109/218 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDG 320

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  L +G  Q G S     +  EML  G+K D
Sbjct: 321 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPD 380

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             TY  +I   CK+G   K + L+K++ ++  VP+  T
Sbjct: 381 ARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418


>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
           [Burroughsia fastigiata]
          Length = 431

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 214/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H +  ++ F  ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++ F    ++C K L  L+  + 
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E        ++Y  N++ H FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    K K+ M  +G+ P+V T++ LI G CK+ K+  AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G   +A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A +++ EML   + PD+   + + + +   G      KL ++M+  G  P
Sbjct: 363 CQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAP 420



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 154/291 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L   +      R A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 140 ASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKL 199

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M  + + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 200 KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCK 259

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L++A+ +  EM    + P+ +T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKIT 319

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++ 
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREML 379

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
              L P+  TY+ +I   C + +  +  +L K M   G  P+   + +LM+
Sbjct: 380 SVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMN 430



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 117/229 (51%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 203 MHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S   +P + TYNTLI G C KG L+ A    + M   G++P+ IT+ T
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTT 322

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 323 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVG 382

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           +K D  TY  +I  +CK+G   K + L+K++  +   P+  TY+ L+ G
Sbjct: 383 LKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 215 YSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 274

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G + +A ++   M   G  P   TY TLI G C +G L 
Sbjct: 275 SQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 334

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 335 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMII 394

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N   + G+   G+ L +EM  +G    ++TYN L+ G
Sbjct: 395 NEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/455 (30%), Positives = 225/455 (49%), Gaps = 11/455 (2%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           W KL      + P  +   L+  + +  L L ++TW+  ++  S++LE    +LH L   
Sbjct: 55  WSKLGFHVKDINPNELFRQLISSELNPDLCLRYYTWLVKNRDISVSLELTFKLLHSLANA 114

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS---SPLVFDLLFKTYAHRKKFR 210
           +++    S L G + + S         SI ++  MCD+   + ++ D+L   YA+  +F 
Sbjct: 115 KRYSKIRSFLDGFVRNGS----DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFE 170

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
              + F +   YG+     SC   + +LL   R       YKEM R +I PNV+T N+V+
Sbjct: 171 LGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVI 230

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC---NKGLLSLAMKFKNLMEKN 327
           +A CK G + +A +V ++M+  G+ P+V +YNTLI G+C     G +  A      M +N
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PN+ TFN LI GF K   L  + ++F EM   +V PNV+TYN+LING    G     
Sbjct: 291 EVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEA 350

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + ++M+  G++ +++TY++LI G CK G  K+A  +   +      P    Y+ LI  
Sbjct: 351 IGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     +  F L + M R G  P+   +  L++  C+N + + AA+ L + L     PD
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE-AAKKLFDQLTNKGLPD 469

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +    L  G    G+   A  L ++M   GL P+
Sbjct: 470 LVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPR 504



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 182/359 (50%), Gaps = 5/359 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS---LLDSER 243
           R    +   F+++        K   A D    M+ YG+ P + S N  +     L  + +
Sbjct: 217 RKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGK 276

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +  A    KEM  N +SPN+ T N+++  F K   +  +++VFK M     IP+V TYN+
Sbjct: 277 MYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNS 336

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G CN G ++ A+  ++ M   G+QPN+IT+++LI GFCK G + EA  +F  +K   
Sbjct: 337 LINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQG 396

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P    YN LI+ Y ++G  + G +L EEM R GI  D+ TYN LI GLC+ G  + A 
Sbjct: 397 TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L   L    L P+  T+  L+ G C R  S +A  L K M + G +P    + ++M  +
Sbjct: 457 KLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGY 515

Query: 484 CQNEDFDRAAEVLLEM-LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  +   A  +  +M  E+ +  +    + L  G    GK E A  L  +M  +GL+P
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVP 574



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 39/300 (13%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D++L      + SP    F++L   +        +   F +M D   +P + + N  ++ 
Sbjct: 281 DAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING 340

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L +  +++ A+G   +M    + PN+ T + +++ FCK G+++ A+++F +++  G  P+
Sbjct: 341 LCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPT 400

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
              YN LI  +C  G +      K  ME+ GI P+V T+N LI G C+ G +  A ++F 
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           ++    + P++VT++ L+ GY   G S   A L +EM + G+K   LTYN ++ G CKEG
Sbjct: 461 QLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519

Query: 418 KTKKAAYLVKDLDKN------------------------------------SLVPNASTY 441
             K A  +   ++K                                      LVPN  TY
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 111/255 (43%), Gaps = 39/255 (15%)

Query: 342 GFCKKGKLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMG------------- 387
           GF + G  H+ + IF  +    NV  N +  + L+  Y      E+G             
Sbjct: 126 GFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYK 185

Query: 388 ----------------------ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
                                   LY+EM+R  I+ ++ T+N +I  LCK GK  KA  +
Sbjct: 186 LSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDV 245

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ---LYKSMIRSGCRPNKHIFEMLMST 482
           ++D+      PN  +Y+ LI G C    + + ++   + K M+ +   PN   F +L+  
Sbjct: 246 MEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDG 305

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           F ++++   + +V  EML++ + P+ I  + L +GL + GK   A+ +  KM   G+ P 
Sbjct: 306 FWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPN 365

Query: 543 GFDKLRTINCAPENG 557
                  IN   +NG
Sbjct: 366 LITYHSLINGFCKNG 380



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/189 (20%), Positives = 73/189 (38%), Gaps = 37/189 (19%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L   Y    K  +      +M   G +P + + N  ++ L  +  ++ A   + ++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP------------------ 296
             N+  P++ T +++M  +C  G   +A  + K M  MG  P                  
Sbjct: 463 T-NKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521

Query: 297 ------------------SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                             +V +YN L+ G+  KG L  A    N M + G+ PN IT+  
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581

Query: 339 LIFGFCKKG 347
           +      KG
Sbjct: 582 VKEEMVDKG 590



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 72/176 (40%), Gaps = 11/176 (6%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +E   IV  + T N        ++ G+  + + +   KLFD  L +  + D   + F +L
Sbjct: 427 MEREGIVPDVGTYN-------CLIAGLCRNGNIEAAKKLFDQ-LTNKGLPD--LVTFHIL 476

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR- 258
            + Y  R + R A     +M   G  P   + N  +        +  A     +M + R 
Sbjct: 477 MEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERR 536

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +  NV + N+++  + + G +E A  +   M   G +P+  TY  +     +KG +
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 229/465 (49%), Gaps = 20/465 (4%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W  L  +       R+ H          L+L+F  WV   +P    LET  I
Sbjct: 24  YNILTIDRWGSLNHMDYRQARLRLVH--------GKLALKFLKWV-VKQPG---LETDHI 71

Query: 146 V------LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           V       HIL + R +  +  IL+ +  S      S +F +++ +YR+C+S+P V+D+L
Sbjct: 72  VQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFGALMTTYRLCNSNPSVYDIL 129

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y      +++ + F  M  YGF P + +CN  L S++ S        F KEM + +I
Sbjct: 130 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 189

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V T N++++  C  G  E++  + + ME  G+ P++ TYNT++  +C KG    A++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M+  G+  +V T+N LI   C+  ++ +   +  +M+   + PN VTYNTLING+ 
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G   + + L  EML  G+  + +T+NALI G   EG  K+A  +   ++   L P+  
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y  L+ G C     + A   Y  M R+G    +  +  ++   C+N   D A  +L EM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + PD +  S L +G    G+ + A ++  ++   GL P G 
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 167/351 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   Y  + +F+ A +    M+  G    + + N  +  L  S R+       ++
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  I PN  T N +++ F   G +  A ++   M S G  P+  T+N LI GH ++G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+K   +ME  G+ P+ +++  L+ G CK  +   A   +  MK   V    +TY  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  +    L  EM ++GI  DI+TY+ALI G CK G+ K A  +V  + +  
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN   YS LI   C     + A ++Y++MI  G   +   F +L+++ C+      A 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           E +  M    + P+++    L +G  + G+   A  +F +M   G  P  F
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 19/424 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFD-----SILYSY-- 186
           T+ T++ VLH   K  +FK++  +L     +G+ D+D       + D      I   Y  
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLL 285

Query: 187 ------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                 RM   + + ++ L   +++  K   A+    +M  +G  P   + N  +   + 
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
                 AL  +  M    ++P+  +  +++   CK    + A   +  M+  G      T
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y  +I G C  G L  A+   N M K+GI P+++T++ LI GFCK G+   A  I   + 
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              +SPN + Y+TLI    ++G  +    +YE M+  G   D  T+N L+  LCK GK  
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A   ++ +  + ++PN  ++  LI G        +AF ++  M + G  P    +  L+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+      A + L  +     A D+++ + L + +   G    A+ LF +M  R +L
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645

Query: 541 PKGF 544
           P  +
Sbjct: 646 PDSY 649



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 175/423 (41%), Gaps = 59/423 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +     F+ A   F  M   G  P   S    L  L  +   D+A GFY  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+RN +     T   ++   CK G ++ AV +   M   G  P + TY+ LI+G C  G 
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-------------- 359
              A +    + + G+ PN I ++TLI+  C+ G L EA RI+  M              
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513

Query: 360 ------KATNVS---------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                 KA  V+               PN V+++ LINGYG  G      S+++EM + G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                 TY +L+ GLCK G  ++A   +K L       +   Y+ L+T  C   N  +A 
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNED------FDRAAEVLLEMLEKCMAPDSIILS 512
            L+  M++    P+ + +  L+S  C+         F + AE    +L     P+ ++ +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL-----PNKVMYT 688

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKL----RTINCAPENGEK 559
               G+   G+ +  +    +M+  G  P          G+ ++    +T +  PE G +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 560 ESG 562
             G
Sbjct: 749 NGG 751



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 36/382 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L   Y +  +   A   F +M   G  P   +    L  L     +  A  F K + 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +    N ++ A CK G + +AV +F  M     +P   TY +LISG C KG   
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 316 LAM------------------------------------KFKNLMEKNGIQPNVITFNTL 339
           +A+                                     F+  M+  G  P+++T N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+ + GK+ + N +  EM   N  PN+ TYN L++GY +  +      LY  ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D LT ++L+LG+C+    +    ++K      +  +  T++ LI+  C       AF 
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K M   G   +K   + ++S   +N  F  +  VL EM ++ ++P+S     L +GL 
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G  + A  +  +M    + P
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICP 927



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 9/390 (2%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  S+L+G+          K   S+       D+  ++++ L            A   
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMYNTLLTAMCKSGNLAKAVSL 635

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFC 274
           F +M     LP   +    +S L    +  IA+ F KE   R  + PN       +    
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ---P 331
           K G  +  +   + M+++G  P + T N +I G+   G +    K  +L+ + G Q   P
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE---KTNDLLPEMGNQNGGP 752

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+ T+N L+ G+ K+  +  +  ++  +    + P+ +T ++L+ G  +    E+G  + 
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +  +  G++VD  T+N LI   C  G+   A  LVK +    +  +  T  A+++     
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + +  +   M + G  P    +  L++  C+  D   A  V  EM+   + P ++  
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S +   L  CGK + A  L R M    L+P
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVP 962



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 143/324 (44%)

Query: 218  QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            QM + G  P I + N  +       +++       EM      PN+ T N+++H + K  
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 278  IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             +  +  +++++   G +P   T ++L+ G C   +L + +K        G++ +  TFN
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 338  TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             LI   C  G+++ A  +   M +  +S +  T + +++   +    +    +  EM + 
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 398  GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            GI  +   Y  LI GLC+ G  K A  + +++  + + P     SA++        ++ A
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 458  FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              L + M++    P    F  LM   C+N +   A E+ + M    +  D +  + L +G
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1008

Query: 518  LHHCGKDELAMKLFRKMEIRGLLP 541
            L   G   LA +L+ +M+  G L 
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLA 1032



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 130/305 (42%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++L   Y+ RK    +   +  +   G LP   +C+  +  + +S  ++I L   K   
Sbjct: 757  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +  + YT NM++   C  G I  A ++ K M S+G      T + ++S         
Sbjct: 817  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +    + M K GI P    +  LI G C+ G +  A  +  EM A  + P  V  + ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                + G ++    L   ML+  +   I ++  L+   CK G   +A  L   +    L 
Sbjct: 937  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
             +  +Y+ LITG C + +   AF+LY+ M   G   N   ++ L+      E     A++
Sbjct: 997  LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056

Query: 496  LLEML 500
            +L+ L
Sbjct: 1057 ILKDL 1061



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 4/322 (1%)

Query: 199  LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--YKEMRR 256
            +   Y+   K     D   +M +    P + + N  L     S+R D++  F  Y+ +  
Sbjct: 725  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFLLYRSIIL 782

Query: 257  NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            N I P+  T + ++   C+  ++E  +++ K     G      T+N LIS  C  G ++ 
Sbjct: 783  NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 842

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A     +M   GI  +  T + ++    +  +  E+  +  EM    +SP    Y  LIN
Sbjct: 843  AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            G  +VG+ +    + EEM+ + I    +  +A++  L K GK  +A  L++ + K  LVP
Sbjct: 903  GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
              ++++ L+   C   N   A +L   M   G + +   + +L++  C   D   A E+ 
Sbjct: 963  TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1022

Query: 497  LEMLEKCMAPDSIILSELYSGL 518
             EM       ++     L  GL
Sbjct: 1023 EEMKGDGFLANATTYKALIRGL 1044


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 229/465 (49%), Gaps = 20/465 (4%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W  L  +       R+ H          L+L+F  WV   +P    LET  I
Sbjct: 24  YNILTIDRWGSLNHMDYRQARLRLVH--------GKLALKFLKWV-VKQPG---LETDHI 71

Query: 146 V------LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           V       HIL + R +  +  IL+ +  S      S +F +++ +YR+C+S+P V+D+L
Sbjct: 72  VQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFGALMTTYRLCNSNPSVYDIL 129

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y      +++ + F  M  YGF P + +CN  L S++ S        F KEM + +I
Sbjct: 130 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 189

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V T N++++  C  G  E++  + + ME  G+ P++ TYNT++  +C KG    A++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M+  G+  +V T+N LI   C+  ++ +   +  +M+   + PN VTYNTLING+ 
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G   + + L  EML  G+  + +T+NALI G   EG  K+A  +   ++   L P+  
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y  L+ G C     + A   Y  M R+G    +  +  ++   C+N   D A  +L EM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + PD +  S L +G    G+ + A ++  ++   GL P G 
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 167/351 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   Y  + +F+ A +    M+  G    + + N  +  L  S R+       ++
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  I PN  T N +++ F   G +  A ++   M S G  P+  T+N LI GH ++G 
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+K   +ME  G+ P+ +++  L+ G CK  +   A   +  MK   V    +TY  
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  +    L  EM ++GI  DI+TY+ALI G CK G+ K A  +V  + +  
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN   YS LI   C     + A ++Y++MI  G   +   F +L+++ C+      A 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           E +  M    + P+++    L +G  + G+   A  +F +M   G  P  F
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 19/424 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFD-----SILYSY-- 186
           T+ T++ VLH   K  +FK++  +L     +G+ D+D       + D      I   Y  
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLL 285

Query: 187 ------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                 RM   + + ++ L   +++  K   A+    +M  +G  P   + N  +   + 
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
                 AL  +  M    ++P+  +  +++   CK    + A   +  M+  G      T
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y  +I G C  G L  A+   N M K+GI P+++T++ LI GFCK G+   A  I   + 
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              +SPN + Y+TLI    ++G  +    +YE M+  G   D  T+N L+  LCK GK  
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A   ++ +  + ++PN  ++  LI G        +AF ++  M + G  P    +  L+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+      A + L  +     A D+++ + L + +   G    A+ LF +M  R +L
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645

Query: 541 PKGF 544
           P  +
Sbjct: 646 PDSY 649



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 175/423 (41%), Gaps = 59/423 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +     F+ A   F  M   G  P   S    L  L  +   D+A GFY  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+RN +     T   ++   CK G ++ AV +   M   G  P + TY+ LI+G C  G 
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-------------- 359
              A +    + + G+ PN I ++TLI+  C+ G L EA RI+  M              
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513

Query: 360 ------KATNVS---------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                 KA  V+               PN V+++ LINGYG  G      S+++EM + G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                 TY +L+ GLCK G  ++A   +K L       +   Y+ L+T  C   N  +A 
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNED------FDRAAEVLLEMLEKCMAPDSIILS 512
            L+  M++    P+ + +  L+S  C+         F + AE    +L     P+ ++ +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL-----PNKVMYT 688

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKL----RTINCAPENGEK 559
               G+   G+ +  +    +M+  G  P          G+ ++    +T +  PE G +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748

Query: 560 ESG 562
             G
Sbjct: 749 NGG 751



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 36/382 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L   Y +  +   A   F +M   G  P   +    L  L     +  A  F K + 
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +    N ++ A CK G + +AV +F  M     +P   TY +LISG C KG   
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665

Query: 316 LAM------------------------------------KFKNLMEKNGIQPNVITFNTL 339
           +A+                                     F+  M+  G  P+++T N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+ + GK+ + N +  EM   N  PN+ TYN L++GY +  +      LY  ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D LT ++L+LG+C+    +    ++K      +  +  T++ LI+  C       AF 
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K M   G   +K   + ++S   +N  F  +  VL EM ++ ++P+S     L +GL 
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G  + A  +  +M    + P
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICP 927



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 9/390 (2%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  S+L+G+          K   S+       D+  ++++ L            A   
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMYNTLLTAMCKSGNLAKAVSL 635

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFC 274
           F +M     LP   +    +S L    +  IA+ F KE   R  + PN       +    
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ---P 331
           K G  +  +   + M+++G  P + T N +I G+   G +    K  +L+ + G Q   P
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE---KTNDLLPEMGNQNGGP 752

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+ T+N L+ G+ K+  +  +  ++  +    + P+ +T ++L+ G  +    E+G  + 
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +  +  G++VD  T+N LI   C  G+   A  LVK +    +  +  T  A+++     
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + +  +   M + G  P    +  L++  C+  D   A  V  EM+   + P ++  
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S +   L  CGK + A  L R M    L+P
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVP 962



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 143/324 (44%)

Query: 218  QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            QM + G  P I + N  +       +++       EM      PN+ T N+++H + K  
Sbjct: 709  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768

Query: 278  IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             +  +  +++++   G +P   T ++L+ G C   +L + +K        G++ +  TFN
Sbjct: 769  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828

Query: 338  TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             LI   C  G+++ A  +   M +  +S +  T + +++   +    +    +  EM + 
Sbjct: 829  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888

Query: 398  GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            GI  +   Y  LI GLC+ G  K A  + +++  + + P     SA++        ++ A
Sbjct: 889  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948

Query: 458  FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              L + M++    P    F  LM   C+N +   A E+ + M    +  D +  + L +G
Sbjct: 949  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1008

Query: 518  LHHCGKDELAMKLFRKMEIRGLLP 541
            L   G   LA +L+ +M+  G L 
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLA 1032



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/365 (23%), Positives = 144/365 (39%), Gaps = 56/365 (15%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++L   Y+ RK    +   +  +   G LP   +C+  +  + +S  ++I L   K   
Sbjct: 757  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-------------------- 295
               +  + YT NM++   C  G I  A ++ K M S+G                      
Sbjct: 817  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876

Query: 296  ---------------PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                           P    Y  LI+G C  G +  A   K  M  + I P  +  + ++
Sbjct: 877  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                K GK  EA  +   M    + P + ++ TL++   + GN      L   M   G+K
Sbjct: 937  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS------ 454
            +D+++YN LI GLC +G    A  L +++  +  + NA+TY ALI G   R+ +      
Sbjct: 997  LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056

Query: 455  ------ERAFQLYKSMIRSGCRPNKHIFEMLMS-----TFCQNEDFDRAAEVL----LEM 499
                   R F    S+ +   R  K   E L +       C  E+ D  + VL    L++
Sbjct: 1057 ILKDLLARGFITSMSLSQDSHRNLKMAMEKLKALQNDIAVCHREELDLQSNVLSKNQLKL 1116

Query: 500  LEKCM 504
             E C+
Sbjct: 1117 FELCL 1121



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 134/303 (44%), Gaps = 4/303 (1%)

Query: 199  LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--YKEMRR 256
            +   Y+   K     D   +M +    P + + N  L     S+R D++  F  Y+ +  
Sbjct: 725  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFLLYRSIIL 782

Query: 257  NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            N I P+  T + ++   C+  ++E  +++ K     G      T+N LIS  C  G ++ 
Sbjct: 783  NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 842

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A     +M   GI  +  T + ++    +  +  E+  +  EM    +SP    Y  LIN
Sbjct: 843  AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            G  +VG+ +    + EEM+ + I    +  +A++  L K GK  +A  L++ + K  LVP
Sbjct: 903  GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
              ++++ L+   C   N   A +L   M   G + +   + +L++  C   D   A E+ 
Sbjct: 963  TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1022

Query: 497  LEM 499
             EM
Sbjct: 1023 EEM 1025


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 229/465 (49%), Gaps = 20/465 (4%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W  L  +       R+ H          L+L+F  WV   +P    LET  I
Sbjct: 64  YNILTIDRWGSLNHMDYRQARLRLVH--------GKLALKFLKWV-VKQPG---LETDHI 111

Query: 146 V------LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           V       HIL + R +  +  IL+ +  S      S +F +++ +YR+C+S+P V+D+L
Sbjct: 112 VQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFGALMTTYRLCNSNPSVYDIL 169

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y      +++ + F  M  YGF P + +CN  L S++ S        F KEM + +I
Sbjct: 170 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 229

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V T N++++  C  G  E++  + + ME  G+ P++ TYNT++  +C KG    A++
Sbjct: 230 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 289

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M+  G+  +V T+N LI   C+  ++ +   +  +M+   + PN VTYNTLING+ 
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G   + + L  EML  G+  + +T+NALI G   EG  K+A  +   ++   L P+  
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y  L+ G C     + A   Y  M R+G    +  +  ++   C+N   D A  +L EM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + PD +  S L +G    G+ + A ++  ++   GL P G 
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 167/351 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   Y  + +F+ A +    M+  G    + + N  +  L  S R+       ++
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 328

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  I PN  T N +++ F   G +  A ++   M S G  P+  T+N LI GH ++G 
Sbjct: 329 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 388

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+K   +ME  G+ P+ +++  L+ G CK  +   A   +  MK   V    +TY  
Sbjct: 389 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 448

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  +    L  EM ++GI  DI+TY+ALI G CK G+ K A  +V  + +  
Sbjct: 449 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 508

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN   YS LI   C     + A ++Y++MI  G   +   F +L+++ C+      A 
Sbjct: 509 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 568

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           E +  M    + P+++    L +G  + G+   A  +F +M   G  P  F
Sbjct: 569 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 19/424 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFD-----SILYSY-- 186
           T+ T++ VLH   K  +FK++  +L     +G+ D+D       + D      I   Y  
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLL 325

Query: 187 ------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                 RM   + + ++ L   +++  K   A+    +M  +G  P   + N  +   + 
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
                 AL  +  M    ++P+  +  +++   CK    + A   +  M+  G      T
Sbjct: 386 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 445

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y  +I G C  G L  A+   N M K+GI P+++T++ LI GFCK G+   A  I   + 
Sbjct: 446 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 505

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              +SPN + Y+TLI    ++G  +    +YE M+  G   D  T+N L+  LCK GK  
Sbjct: 506 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 565

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A   ++ +  + ++PN  ++  LI G        +AF ++  M + G  P    +  L+
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+      A + L  +     A D+++ + L + +   G    A+ LF +M  R +L
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685

Query: 541 PKGF 544
           P  +
Sbjct: 686 PDSY 689



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 175/423 (41%), Gaps = 59/423 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +     F+ A   F  M   G  P   S    L  L  +   D+A GFY  
Sbjct: 374 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+RN +     T   ++   CK G ++ AV +   M   G  P + TY+ LI+G C  G 
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-------------- 359
              A +    + + G+ PN I ++TLI+  C+ G L EA RI+  M              
Sbjct: 494 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 553

Query: 360 ------KATNVS---------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                 KA  V+               PN V+++ LINGYG  G      S+++EM + G
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 613

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                 TY +L+ GLCK G  ++A   +K L       +   Y+ L+T  C   N  +A 
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 673

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNED------FDRAAEVLLEMLEKCMAPDSIILS 512
            L+  M++    P+ + +  L+S  C+         F + AE    +L     P+ ++ +
Sbjct: 674 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL-----PNKVMYT 728

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKL----RTINCAPENGEK 559
               G+   G+ +  +    +M+  G  P          G+ ++    +T +  PE G +
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788

Query: 560 ESG 562
             G
Sbjct: 789 NGG 791



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 36/382 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L   Y +  +   A   F +M   G  P   +    L  L     +  A  F K + 
Sbjct: 586 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 645

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +    N ++ A CK G + +AV +F  M     +P   TY +LISG C KG   
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 705

Query: 316 LAM------------------------------------KFKNLMEKNGIQPNVITFNTL 339
           +A+                                     F+  M+  G  P+++T N +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+ + GK+ + N +  EM   N  PN+ TYN L++GY +  +      LY  ++ NGI
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D LT ++L+LG+C+    +    ++K      +  +  T++ LI+  C       AF 
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K M   G   +K   + ++S   +N  F  +  VL EM ++ ++P+S     L +GL 
Sbjct: 886 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G  + A  +  +M    + P
Sbjct: 946 RVGDIKTAFVVKEEMIAHKICP 967



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 9/390 (2%)

Query: 156  FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
            F +  S+L+G+          K   S+       D+  ++++ L            A   
Sbjct: 618  FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMYNTLLTAMCKSGNLAKAVSL 675

Query: 216  FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFC 274
            F +M     LP   +    +S L    +  IA+ F KE   R  + PN       +    
Sbjct: 676  FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 735

Query: 275  KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ---P 331
            K G  +  +   + M+++G  P + T N +I G+   G +    K  +L+ + G Q   P
Sbjct: 736  KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE---KTNDLLPEMGNQNGGP 792

Query: 332  NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            N+ T+N L+ G+ K+  +  +  ++  +    + P+ +T ++L+ G  +    E+G  + 
Sbjct: 793  NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 852

Query: 392  EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +  +  G++VD  T+N LI   C  G+   A  LVK +    +  +  T  A+++     
Sbjct: 853  KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 912

Query: 452  KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               + +  +   M + G  P    +  L++  C+  D   A  V  EM+   + P ++  
Sbjct: 913  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972

Query: 512  SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            S +   L  CGK + A  L R M    L+P
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVP 1002



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 143/324 (44%)

Query: 218  QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            QM + G  P I + N  +       +++       EM      PN+ T N+++H + K  
Sbjct: 749  QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 808

Query: 278  IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             +  +  +++++   G +P   T ++L+ G C   +L + +K        G++ +  TFN
Sbjct: 809  DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 868

Query: 338  TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             LI   C  G+++ A  +   M +  +S +  T + +++   +    +    +  EM + 
Sbjct: 869  MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928

Query: 398  GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            GI  +   Y  LI GLC+ G  K A  + +++  + + P     SA++        ++ A
Sbjct: 929  GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988

Query: 458  FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              L + M++    P    F  LM   C+N +   A E+ + M    +  D +  + L +G
Sbjct: 989  TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1048

Query: 518  LHHCGKDELAMKLFRKMEIRGLLP 541
            L   G   LA +L+ +M+  G L 
Sbjct: 1049 LCAKGDMALAFELYEEMKGDGFLA 1072



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 130/305 (42%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++L   Y+ RK    +   +  +   G LP   +C+  +  + +S  ++I L   K   
Sbjct: 797  YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 856

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +  + YT NM++   C  G I  A ++ K M S+G      T + ++S         
Sbjct: 857  CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 916

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +    + M K GI P    +  LI G C+ G +  A  +  EM A  + P  V  + ++
Sbjct: 917  ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 976

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                + G ++    L   ML+  +   I ++  L+   CK G   +A  L   +    L 
Sbjct: 977  RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
             +  +Y+ LITG C + +   AF+LY+ M   G   N   ++ L+      E     A++
Sbjct: 1037 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1096

Query: 496  LLEML 500
            +L+ L
Sbjct: 1097 ILKDL 1101



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 4/322 (1%)

Query: 199  LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--YKEMRR 256
            +   Y+   K     D   +M +    P + + N  L     S+R D++  F  Y+ +  
Sbjct: 765  MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFLLYRSIIL 822

Query: 257  NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            N I P+  T + ++   C+  ++E  +++ K     G      T+N LIS  C  G ++ 
Sbjct: 823  NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 882

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A     +M   GI  +  T + ++    +  +  E+  +  EM    +SP    Y  LIN
Sbjct: 883  AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 942

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            G  +VG+ +    + EEM+ + I    +  +A++  L K GK  +A  L++ + K  LVP
Sbjct: 943  GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
              ++++ L+   C   N   A +L   M   G + +   + +L++  C   D   A E+ 
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062

Query: 497  LEMLEKCMAPDSIILSELYSGL 518
             EM       ++     L  GL
Sbjct: 1063 EEMKGDGFLANATTYKALIRGL 1084


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/460 (29%), Positives = 233/460 (50%), Gaps = 12/460 (2%)

Query: 92  SDWKKLTALS---THLTPFRVKHVLLKVQKDYVLS----LEFFTWVQTH-KPSSLTLETH 143
            DWK++ A S   + L+P  +  +L +      L     L+FF W +T   PS+   +  
Sbjct: 64  GDWKQVIAASDIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAF 123

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS--PLVFDLLFK 201
           + +   L     +  +  +L  ++ +  +  P  +  S+  +    D    P+V D+L  
Sbjct: 124 AHLAVSLCAAGLYPQANGLLDQMIRA--YPTPPLVLSSVHRALSGSDQGRRPVVLDVLVD 181

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           TY    + R+  +    M+D G  P +  CN  L  LL ++ +D+       M    ISP
Sbjct: 182 TYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISP 241

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +VYT + ++ A+CK+  +E A +V + M   G   +V TYNTLI G C  G +  A  +K
Sbjct: 242 DVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYK 301

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             ME  G+ P+  T+  +I G CK+G+  +A  +  EM    + PNVV Y+TLI+G+ + 
Sbjct: 302 KEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQ 361

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           GN++    + +EM   G++ + +TY+ LI GLCK G+  +A+ ++K + K   + +  TY
Sbjct: 362 GNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTY 421

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I G   + N E AF L   M + G  PN + + ++++  CQ  + +RA+ +L +M+ 
Sbjct: 422 NLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIA 481

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + P++ + + L SG    G   LA +  +KM    L P
Sbjct: 482 DGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTP 521



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 168/349 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L + Y   +   +A     +MR+ G    + + N  +  L  +  ++ A G+ KEM 
Sbjct: 246 YSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME 305

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ +T   +++  CK G  ++A  +   M   G +P+V  Y+TLI G   +G   
Sbjct: 306 DYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNAD 365

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K    M   G+QPN IT++ LI G CK G++  A+RI  +M       + +TYN +I
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G+ +  N E    L  EM + GI  ++ TY+ +I GLC+ G++++A+ L++ +  + L 
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PNA  Y+ LI+G C   +   A +  K M R    P+ + +  L+         D A E 
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             EMLEK   P+      L  G    G  E A +L  +M   GL P  F
Sbjct: 546 YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF 594



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 166/347 (47%), Gaps = 2/347 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P +   +  +   +     D A    KEM    + PN  T + ++   CKLG
Sbjct: 338 EMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLG 397

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + RA  + K M  +G++    TYN +I GH  +     A    N M K GI PNV T++
Sbjct: 398 RMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYS 457

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G C+ G+   A+ +  +M A  + PN   Y  LI+GY + G+  +     ++M R 
Sbjct: 458 IIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE 517

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D+  YN+LI+GL   GK  +A     ++ +    PN  TY  LI G  +  N E+A
Sbjct: 518 NLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKA 577

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            QL   M+ SG  PN  I+  ++  + ++++ ++ +  L  MLEK + PD+ +   +   
Sbjct: 578 EQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHN 637

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCAPENGEKESG 562
           L   G  + A+ +   +E  GL+P    +  L +  C   + EK  G
Sbjct: 638 LSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVG 684



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 169/386 (43%), Gaps = 35/386 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +D L +      +   A+    QM   G++    + N  +   L     + A     E
Sbjct: 384 ITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNE 443

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  ISPNVYT +++++  C++G  ERA  + + M + G  P+   Y  LISG+C +G 
Sbjct: 444 MRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGS 503

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            SLA +    M +  + P++  +N+LI G    GK+ EA   + EM      PN  TY  
Sbjct: 504 FSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGG 563

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG--------------------- 412
           LI+GY   GN E    L  +ML +G+  +   Y  ++ G                     
Sbjct: 564 LIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKG 623

Query: 413 --------------LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                         L   G  + A  ++  ++KN LVP++  Y +LI+G C   + E+A 
Sbjct: 624 LMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAV 683

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   M + G  P    +  L+  FC+++D   A  +   ++ K + P+ +  + L  G 
Sbjct: 684 GLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGY 743

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G    A+ L+ +M   G+ P  F
Sbjct: 744 CKAGDIRDAIDLYNEMLTEGVAPDAF 769



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 184/406 (45%), Gaps = 27/406 (6%)

Query: 173 DLPSKLFDSILYSY-RMCDSSP-----LVFDLLFKTYAHRKKFRNATDTFCQMR----DY 222
           D+PS+L  + L S  R C+SSP     L+ D  + +         A D F  +       
Sbjct: 74  DIPSRLSPAALSSLLRRCNSSPRLHPKLLLDFFYWSRTRLAPSAPAPDAFAHLAVSLCAA 133

Query: 223 GFLPIIESCNKFLSSLLDS--------ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
           G  P     N  L  ++ +          V  AL    + RR  +      L++++  + 
Sbjct: 134 GLYP---QANGLLDQMIRAYPTPPLVLSSVHRALSGSDQGRRPVV------LDVLVDTYK 184

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G +    EV   M+ +G  PS+   N L+        L L  K +  ME  GI P+V 
Sbjct: 185 KTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVY 244

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T++TLI  +CK   L  A ++  EM+ T  S NVVTYNTLI G  + G  E      +EM
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM 304

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G+  D  TY A+I GLCK G+  +A  L+ ++    L+PN   YS LI G   + N+
Sbjct: 305 EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNA 364

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + AF++ K M  +G +PNK  ++ L+   C+     RA+ +L +M +     D++  + +
Sbjct: 365 DEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLV 424

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             G       E A  L  +M   G+ P  +     IN   + GE E
Sbjct: 425 IEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE 470



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 157/350 (44%), Gaps = 7/350 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  L   Y     F  A +T  +M      P +   N  +  L +  ++D A+ +Y EM
Sbjct: 490 VYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEM 549

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGL 313
                 PN +T   ++H +   G +E+A ++   M + G  P+   Y  ++ G+  +  L
Sbjct: 550 LEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNL 609

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             ++   K+++EK G+ P+   +  +I      G +  A  + S ++   + P+ + Y +
Sbjct: 610 EKVSSTLKSMLEK-GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ +  + E    L +EM + GI+  I  YNALI G CK      A  +   +    
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  TY+ LI G C   +   A  LY  M+  G  P+  ++ +L +    + D  +A 
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQAL 788

Query: 494 EVLLEMLEKCMAPDSIILS--ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  EM+ +  A   II S   L  G    GK +  +K    M  + ++P
Sbjct: 789 FITEEMIARGYA---IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVP 835



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 140/331 (42%), Gaps = 19/331 (5%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           IL G   SD+ +  S    S+L    M D+   ++ ++    +     + A      +  
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNR--LYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P        +S    +  ++ A+G   EM +  I P +   N ++  FCK   I  
Sbjct: 657 NGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISH 716

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F ++   G  P+  TY TLI G+C  G +  A+   N M   G+ P+   ++ L  
Sbjct: 717 ARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAA 776

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G    G L +A  I  EM A   +  + ++NTL++G+ + G  +        M+   I  
Sbjct: 777 GCSNSGDLQQALFITEEMIARGYAI-ISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVP 835

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            +LT   +++GL + GK  +A  +  +L +     NAS            ++++    L+
Sbjct: 836 SLLTVENIVIGLGEAGKLSEAHTIFVELQQK----NAS-----------HRDTDHLSSLF 880

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             MI  G  P   I  M+ S  C+    D+A
Sbjct: 881 TDMINQGLVPLDVIHNMIQS-HCKQGYLDKA 910



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 105/266 (39%), Gaps = 50/266 (18%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L++  L   +        A     +M   G  P I   N  +     S+ +  A   +  
Sbjct: 664 LIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS 723

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS---------------- 297
           +    + PN  T   ++  +CK G I  A++++  M + G  P                 
Sbjct: 724 IICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGD 783

Query: 298 ------------------VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                             ++++NTL+ G C +G L   +KF ++M    I P+++T   +
Sbjct: 784 LQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENI 843

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G  + GKL EA+ IF E++  N S                 +++  +SL+ +M+  G+
Sbjct: 844 VIGLGEAGKLSEAHTIFVELQQKNASHR---------------DTDHLSSLFTDMINQGL 888

Query: 400 KVDILTYNALILGLCKEGKTKKAAYL 425
            V +   + +I   CK+G   KA  L
Sbjct: 889 -VPLDVIHNMIQSHCKQGYLDKALML 913


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 235/462 (50%), Gaps = 12/462 (2%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           S W  +  ++  LTP  V   LL + K   L+  F   +  ++   L  +T  + + +++
Sbjct: 57  SQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYR---LDFQTQCLAIAVIS 113

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFR 210
           K    K    +L+ ++ S    +   LFD ++ ++ R+   S ++FDLL +     +   
Sbjct: 114 KLSSPKPVTQLLKEVVTSRKNSI-RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + F  M++ GF P  E+CN  L+ L    R++ A  FY +M R  I  NVYT N+++
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  CK G +++A      ME  G  P++ TYNTL+ G   +G +  A    + M+  G Q
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++ T+N ++   C +G+   A+ +  EMK   + P+ V+YN LI G    G+ EM  + 
Sbjct: 293 PDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM++ G+     TYN LI GL  E K + A  L++++ +  +V ++ TY+ LI G C 
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             ++++AF L+  M+  G +P +  +  L+   C+      A E+  +++ K M PD ++
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           ++ L  G    G  + A  L ++M++  + P       T NC
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV----TYNC 507



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 4/357 (1%)

Query: 186 YRM-CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           YRM   S+   F+++        K + A      M  +G  P I + N  +       R+
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A     EM+     P++ T N ++   C  G   RA EV + M+ +G +P   +YN L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNIL 333

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G  N G L +A  +++ M K G+ P   T+NTLI G   + K+  A  +  E++   +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             + VTYN LINGY Q G+++   +L++EM+ +GI+    TY +LI  LC++ KT++A  
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L + +    + P+    + L+ G C   N +RAF L K M      P+   +  LM   C
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               F+ A E++ EM  + + PD I  + L SG    G  + A  +  +M   G  P
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 156/296 (52%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A++   +M++ G +P   S N  +    ++  +++A  +  EM +  + P  YT N ++H
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
                  IE A  + + +   G +    TYN LI+G+C  G    A    + M  +GIQP
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
              T+ +LI+  C+K K  EA+ +F ++    + P++V  NTL++G+  +GN +   SL 
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM    I  D +TYN L+ GLC EGK ++A  L+ ++ +  + P+  +Y+ LI+G   +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            +++ AF +   M+  G  P    +  L+    +N++ + A E+L EM  + + P+
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 108/199 (54%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + EM  + I P  +T   +++  C+      A E+F+ +   G  P +   NTL+ 
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           GHC  G +  A      M+   I P+ +T+N L+ G C +GK  EA  +  EMK   + P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + ++YNTLI+GY + G+++    + +EML  G    +LTYNAL+ GL K  + + A  L+
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595

Query: 427 KDLDKNSLVPNASTYSALI 445
           +++    +VPN S++ ++I
Sbjct: 596 REMKSEGIVPNDSSFCSVI 614



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 21/258 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGI------LDSDSFDL----------PSKLFDSI 182
           T  T++ ++H L    K +++E ++R I      LDS ++++            K F   
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF--A 418

Query: 183 LYSYRMCDS---SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L+   M D    +   +  L      + K R A + F ++   G  P +   N  +    
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
               +D A    KEM    I+P+  T N +M   C  G  E A E+   M+  G  P   
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  KG    A   ++ M   G  P ++T+N L+ G  K  +   A  +  EM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598

Query: 360 KATNVSPNVVTYNTLING 377
           K+  + PN  ++ ++I  
Sbjct: 599 KSEGIVPNDSSFCSVIEA 616


>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           viburnoides]
          Length = 431

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 213/418 (50%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+     S+   TL ++  ++H L  ++    ++S+++ ++        S +F +I 
Sbjct: 3   FFTWLSXPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIX 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +    ++ F    ++C K L  L+  + 
Sbjct: 63  ETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K  +AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN V + TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 HLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C       A ++L EML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 363 CXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 420



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 164/328 (50%), Gaps = 6/328 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLLFKTYAHRKKFRNAT 213
           F +   +L  ++    F L    ++ IL     C   +S   F++L   +      R A 
Sbjct: 107 FDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFNILMHRFCKDGDIRJAQ 162

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F  +  +G  P + S N  ++  +    +D        M  + + P+VYT +++++  
Sbjct: 163 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGX 222

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK    + A E+F  M   G +P+   + TLI GHC  G + LAM+    M    + P++
Sbjct: 223 CKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 282

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G  + G+ +      + 
Sbjct: 283 ITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKR 342

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M++   ++D + Y ALI GLC EG++  A  +++++    L P+A TY+ +I   C + +
Sbjct: 343 MIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGD 402

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             +  +L K M R G  P+   + +LM+
Sbjct: 403 VWKGSKLLKEMQRDGHVPSVVTYNVLMN 430


>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rotundifolia]
          Length = 425

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++ F  ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++      ++C K L  L+  +   +  GFY+++    
Sbjct: 72  LITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + PD    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPDIGTYTMIINEF------CKKGDVWKGSKLLKEMQRNGHAP 414



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 85  AIECYTLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEDIL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 141 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 321 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 381 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 424



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 114/225 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S    P + TYNTLI G C KG L  A    + M   G++P+  T+ TLI G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 320

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+K D
Sbjct: 321 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 380

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           I TY  +I   CK+G   K + L+K++ +N   P+  TY+ L+ G
Sbjct: 381 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G +  A+E +    E   ++P  T    L   H  K     L   
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKVL--EHLMKLKYFKLVWG 122

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++                                   P+  
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQ-----------------------------------PDVY 207

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +M
Sbjct: 208 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 267

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L + ++PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 268 LSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 327

Query: 560 ESG 562
           ++ 
Sbjct: 328 DTA 330


>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           micrantha]
          Length = 431

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 213/418 (50%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S++  ++        S +F ++L
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+  AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M   G  P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAP 420



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 TGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMN 430



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 136/312 (43%), Gaps = 40/312 (12%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK 311
           E + N+ S ++Y  + ++ A+ + G +  A+E ++   E   ++P  T    L   H  K
Sbjct: 63  ETKGNQRS-DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMK 119

Query: 312 -GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                L   F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTL+NGY ++G+ + G  L   ML +G++                              
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------ 209

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
                P+  TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D
Sbjct: 210 -----PDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A E+  +ML + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 551 NCAPENGEKESG 562
           +   + G+ ++ 
Sbjct: 325 DGCCKEGDLDTA 336


>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           camara]
          Length = 431

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 214/418 (51%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S++  ++        S +F ++L
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAAVL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+  AN +F EM    
Sbjct: 183 LMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 243 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL ++M+  G  P
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 420



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 267 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ ++   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 TGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 430



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 40/312 (12%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK 311
           E + N+ S ++Y  + ++ A+ + G +  A+E ++   E   ++P  T    L   H  K
Sbjct: 63  ETKGNQRS-DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMK 119

Query: 312 -GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                L   F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+
Sbjct: 120 LKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVS 179

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTL+NGY ++G+ + G  L   ML +G++                              
Sbjct: 180 YNTLMNGYIRLGDLDEGFRLKSAMLASGVQ------------------------------ 209

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
                P+  TYS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D
Sbjct: 210 -----PDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A E+  +ML + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324

Query: 551 NCAPENGEKESG 562
           +   + G+ ++ 
Sbjct: 325 DGCCKEGDLDTA 336


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 222/436 (50%), Gaps = 10/436 (2%)

Query: 111 HVLLKVQKDYVLSLEFFTWVQTHKP----SSLTLETHSIVLHILTKNRKFKSSES-ILRG 165
            VL + + D  L L+F   V  H P    SSL+L   S ++H L + R+   +++ ILR 
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSLSL---SAMVHFLVRGRRLSEAQACILRM 161

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           +  S    +  K+ +S++ +     S  L++DLL +TY   KK R  ++ F  +R  G  
Sbjct: 162 VRKSGVSRV--KVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVS 219

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
             I +CNK L  L+ +  VD+A   Y E+ R  I  NVYTLN++++A CK    E  +  
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
             +ME  G    + TYNTLI+ +C +GL+  A +  N     G++P ++T+N +++G CK
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK   A  +  EM    ++PN  TYNTL+    +  N      +++EM R G+  D+++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +++LI  L + G   +A    ++++++ +VP+   Y+ LI G C       A ++   M+
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC  +   +   ++  C+ + F  A  +  EM+E+ M PD    + L  G    G  +
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ LF  M    L P
Sbjct: 520 KALNLFEAMVRTNLKP 535



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 172/356 (48%)

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           +S R  +   L ++ +        K+  A D   +M   G  P   + N  L  +   + 
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +  A   + EM R  + P++ + + ++    + G + +A+  F+ ME  G +P    Y  
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C  G LS A+K ++ M   G   +V+T+NT + G CKK    +A+ +F+EM    
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P+  T+ TLI GY + GN +   +L+E M+R  +K D +TYN LI G CK G+  +A 
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L  D+ +  ++P+  +Y  ++ G C       A  L   M+  G RPN      L+  +
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C++ D  +A E L +M+   + PDS   + L  G       E A  L  +ME RGL
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 156/286 (54%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + ++        +K F +A   F +M + G +P   +    +        +D 
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++ M R  + P+  T N ++  FCK G + RA E++ +M     IP   +Y T+++
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLN 580

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C+ GLL  A+   + M + GI+PN++T NTLI G+C+ G + +A    S+M +  + P
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP 640

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  +YNTLI+GY +  N E    L  EM + G++ +I+TYN ++ G C EGK ++A  ++
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + + +  + P+ +TYS+LI G   + N + AF+ +  M++ G  P+
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 199/417 (47%), Gaps = 10/417 (2%)

Query: 128 TWVQTHKPSSLTLETHSIVLHILTK---NRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           T+VQ  K     L   S    IL +   +    +   +L G++ +   DL  +++  ++ 
Sbjct: 196 TYVQAKK-----LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
                + +    +++       +KF N       M   G    I + N  +++      V
Sbjct: 251 G--GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A           + P + T N +++  CK+G  +RA +V   M  +G  P+  TYNTL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           +   C +  +  A +  + M + G+ P++++F++LI    + G L++A   F EM+ + +
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ V Y  LI+G+ + G       + +EML  G  +D++TYN  + GLCK+     A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L  ++ +  +VP+  T++ LI G C   N ++A  L+++M+R+  +P+K  +  L+  FC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  +  RA E+  +M+ K + PD I    + +G    G    A+ L  +M  +G+ P
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 181/383 (47%), Gaps = 39/383 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L      R     A + F +M   G LP + S +  +  L  +  +  AL  ++EM 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ I P+     +++  FC+ G +  A+++   M + G    V TYNT ++G C K + +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N M + G+ P+  TF TLI G+CK G + +A  +F  M  TN+ P+ VTYNTLI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 376 NGYGQVGNSEMGASLYEEMLR-----------------------------------NGIK 400
           +G+ + G       L+++M+R                                    GI+
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++T N LI G C+ G   KA   +  +  N ++P++ +Y+ LI G     N E+AF L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M + G + N   + ++++ FC       A +VL +M+E  + PD    S L +G  H
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING--H 722

Query: 521 CGKDEL--AMKLFRKMEIRGLLP 541
             +D +  A +   +M  RGL+P
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 151/314 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +       +A     +M   G    + + N FL+ L   +    A   + E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YT   ++  +CK G +++A+ +F+ M      P   TYNTLI G C  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M +  I P+ I++ T++ GFC  G L EA  +  +M    + PN+VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI GY + G+         +M+ NGI  D  +YN LI G  KE   +KA  L+ +++K  
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L  N  TY+ ++ G C     + A Q+ + MI  G  P+   +  L++     ++   A 
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732

Query: 494 EVLLEMLEKCMAPD 507
               EML++ + PD
Sbjct: 733 RFHDEMLQRGLVPD 746


>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
          Length = 418

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 217/409 (53%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K +  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF ++   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K++M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y +ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G LP
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYLP 414



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 145/282 (51%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L   +    +   A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +T
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I++D + Y ALI  LC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P   TY+ +I   C + +     +L K M R G  PN
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPN 415



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 4/268 (1%)

Query: 174 LPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           L   +FDSI  +  R    S + F+ L   Y               M+  G  P + + +
Sbjct: 154 LAQSVFDSITKWGLR---PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYS 210

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++ L    ++D A   + EM  N + PN  T   ++   CK G ++ A+E+++ M S 
Sbjct: 211 VLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
             +P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G CK+G L  A
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETA 330

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                 M   N+  + V Y  LI+   Q G S     +  EML  G+K +I TY  +I  
Sbjct: 331 FEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINE 390

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            CK+G     + L+K++ ++  +PN  T
Sbjct: 391 FCKKGDVWTGSKLLKEMQRDGYLPNVVT 418



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 117/265 (44%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  ++ LI+ +   G L  A++   L +++  +    T   +I    K          + 
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +   L   +  + + P+  TYS LI G C     + A  L+  M+ +G  PN   F 
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFT 245

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N   D A E+  +ML + + PD I  + L  GL   G  + A  L  +M ++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P        I+   + G+ E+ 
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETA 330


>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           duartei]
          Length = 412

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 209/400 (52%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  L  
Sbjct: 2   SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIA 61

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+       
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L      K
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLK 181

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ + 
Sbjct: 182 SXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A +L+ ++    L P+  TY
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 301

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C   + + AF+  K MI+   R ++  +  L+S  CQ      A ++L EML 
Sbjct: 302 TTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLS 361

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + PD+   + + +     G      KL ++M+  G +P
Sbjct: 362 VGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVP 401



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 72  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 127

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLAS 187

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLING
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLING 307

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI G C+EG++  A  +++++    L P+
Sbjct: 308 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPD 367

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A TY+ +I   C   +     +L K M R G  P+   + +LM+
Sbjct: 368 ARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 196 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M   G  P   TY TLI+G C +G L 
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLD 315

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  +I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 375

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCK G +   +++  EM+     P+VVTYN L+NG
Sbjct: 376 NEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 133/302 (44%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T         C K L  L MK 
Sbjct: 52  DIYVFSGLIAAYLESGFLRDAIECYRLTREHKFWVPFDT---------CRKVLEHL-MKL 101

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E+       ++  +N L++ + +
Sbjct: 102 K--------------YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCK 135

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+  +  S+++ + + G++  +++YN L+ G  + G   +   L   +  + + P+  T
Sbjct: 136 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXLKSXMLASGVQPDVYT 195

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 196 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        IN   + G+ +
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLINGCCKEGDLD 315

Query: 561 SG 562
           S 
Sbjct: 316 SA 317


>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
          Length = 418

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 208/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVFATILETKGAQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + F   R+  +    ++C K L  L+  +   +   FYKE+   R
Sbjct: 72  LITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYKEILECR 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++M  FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ EA+++F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML  G   D +TYN LI GLCK+G   +A  L  ++    L P+ 
Sbjct: 252 CKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  C+      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + +       G  ++  KL ++M+  G +P
Sbjct: 372 MLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 116/265 (43%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  ++ LI+ +   G L  A++   L  +N       T   ++    K          + 
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECFRLTRENKYWVPFDTCRKVLEHLMKLKYFKLVWSFYK 125

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E+       ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G
Sbjct: 126 EILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +   L   +  + + P+  TYS LI G C     + A +L+  M+  G  PN   F 
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFT 245

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N   D A E+  +ML +  +PD I  + L  GL   G    A  L  +M ++
Sbjct: 246 TLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK 305

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P        I+ + + G+ E+ 
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETA 330



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 85/209 (40%), Gaps = 2/209 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      D   KLFD +L   R    + + F  L   +    K   A + + QM  
Sbjct: 212 LINGLCKESKMDEAHKLFDEMLD--RGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLS 269

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GF P   + N  +  L     +  A     EM    + P+  T   ++   CK G +E 
Sbjct: 270 QGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLET 329

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A E  K M          +Y  LISG C +G    A K    M   G++P+  T+  ++ 
Sbjct: 330 AFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMH 389

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            FCK G +   +++  EM+     P V+T
Sbjct: 390 EFCKNGDVKMGSKLLKEMQRDGHVPCVIT 418


>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           macropoda]
          Length = 412

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 209/400 (52%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++  ++H L   +    ++S+++ ++        S +F +I+ +     S   VF  L  
Sbjct: 2   SYCTMIHFLCTQQMLSEAKSLIQVVVSRKGKGSASAVFAAIVETKGTQRSDLYVFSGLIT 61

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+       
Sbjct: 62  AYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    + K
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ + 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A +L+ ++    L P+  TY
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITY 301

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C   + + AF+  K MI+   R ++  +  L+S  CQ      A ++L EML 
Sbjct: 302 TTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 361

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + PDS   + + +     G      KL ++M+  G +P
Sbjct: 362 VGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 401



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 72  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 127

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 187

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 248 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDG 307

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 308 CCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPD 367

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           + TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 368 SRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 411



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 196 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A  +   M      P   TY TLI G C +G L 
Sbjct: 256 SQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLD 315

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  +I
Sbjct: 316 SAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMII 375

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + + +++  EM+     P+VVTYN L+NG
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412


>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
           [Acantholippia seriphioides]
          Length = 414

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 207/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQFVVSRKGKGSASAVFAAILETKGTQRSDIXVFSG 60

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 61  LITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEILECG 120

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL+SG+   G L    
Sbjct: 121 YPASLYFFNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGF 180

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ EAN +F EM    + P  VT+ TLI+G+
Sbjct: 181 RLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGH 240

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++      P+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDK 300

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 301 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 360

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML     PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 MLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 403



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 169/344 (49%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    +  IL     C   +S   F+
Sbjct: 74  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYQEIL----ECGYPASLYFFN 129

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  +S  +    +D        M  +
Sbjct: 130 ILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHAS 189

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P   T+ TLI GHC  G + LA
Sbjct: 190 GVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLA 249

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM      P+ +TY TLI+G
Sbjct: 250 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDG 309

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++      P+
Sbjct: 310 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPD 369

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +     +L K M R G  P+   + +LM+
Sbjct: 370 TRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMN 413



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 94/217 (43%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 198 YSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQML 257

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A  +   M   G  P   TY TLI G C +G L 
Sbjct: 258 SQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLD 317

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G +P+  T+  +I
Sbjct: 318 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMII 377

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG +   +++  EM+     P+VVTYN L+NG
Sbjct: 378 NEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 36/248 (14%)

Query: 311 KGLLSLAMKFKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           KG  S +  F  ++E  G Q  ++  F+ LI  + + G L +A   +   +         
Sbjct: 32  KGKGSASAVFAAILETKGTQRSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFD 91

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T   ++    ++   ++    Y+E+L  G    +  +N L+   CKEG  + A  +   +
Sbjct: 92  TCRKVLEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAI 151

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K  L P+  +Y+ L++G     + +  F+L  +M  SG +P+ + + +L++  C+    
Sbjct: 152 TKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKM 211

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
           D A E                                   LF +M + GL+P G      
Sbjct: 212 DEANE-----------------------------------LFDEMLVXGLVPXGVTFTTL 236

Query: 550 INCAPENG 557
           I+   +NG
Sbjct: 237 IDGHCKNG 244


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 214/440 (48%), Gaps = 14/440 (3%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETH-- 143
           Y+ L    W+ L  ++  L   R  H +L        +L+F  WV       +   TH  
Sbjct: 10  YTFLTIHRWESLNRMNYRLGSLRPIHGML--------ALKFLNWVIKKPNLEINHLTHII 61

Query: 144 SIVLHILTKNRKFKSSESILRGILDSD-SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKT 202
           S   HIL K R +  +++ L  +L  D  F+    +F +++ +Y  C+S+P VFDLL + 
Sbjct: 62  STTTHILVKARMYGYAKTTLSHMLHMDVGFN---NVFGALMETYPFCNSNPAVFDLLIRV 118

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
                   +A + F  M   GF P + +CN  L SL+    VD+   F+KEM  NR+SPN
Sbjct: 119 CLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPN 178

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T N++++A C+ G  + A  + + M+  G  P+  TYNTL++ +C KG    A +  +
Sbjct: 179 VATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELID 238

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI  +V T+N LI   C+K +  +   I   M+   V PN +TYNTLING  + G
Sbjct: 239 AMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEG 298

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              +   ++EEM    +  + +TYN LI G C  G  ++A  L   +  + L PN  TY 
Sbjct: 299 KIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYG 358

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           AL+ G            + + M   G R     +  ++   C+N   + A ++L +ML+ 
Sbjct: 359 ALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKV 418

Query: 503 CMAPDSIILSELYSGLHHCG 522
            ++PD +  S L +G    G
Sbjct: 419 SVSPDIVTFSVLVNGFLKTG 438



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 1/298 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-PSVTTYNTLI 305
           A+    EM  N   P+ +T   ++   C+ G +  A+ +       G + P+   Y +L+
Sbjct: 602 AVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLV 661

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G   +G    A+     M   G+QP+ I FN L+  + +KGK+ + N I S M++ ++ 
Sbjct: 662 DGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLC 721

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            N+ TYN L++GY +       + LY EM+ +G   D LT+++LILG CK G    A   
Sbjct: 722 FNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKF 781

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++ +       +  T + L++  C R   + AF L K +   G  PN   +  L + F +
Sbjct: 782 LRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVR 841

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
              FD A  +L  +LE   AP     + L  G+   G  + AM+L  +M+I G+  +G
Sbjct: 842 TCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQG 899



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 130/278 (46%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N    ++++    +  ++  AVE F+ M   GF PSV T N ++        + L   F 
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M  N + PNV TFN L+   C++GK   A  +  +M  T   P  VTYNTL+N Y + 
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +  + L + M   GI  D+ TYN LI  LC++ ++ K   +++ + KN + PN  TY
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G         A ++++ M      PN   +  L+   C N + + A  +   M+ 
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVS 347

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + P+ +    L +G+    +  L   +  +M + G+
Sbjct: 348 HGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGV 385



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 139/289 (48%), Gaps = 2/289 (0%)

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            MR   +  N+ T N+++H + K   + R  +++  M   GF P   T+++LI G+C  G 
Sbjct: 715  MRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGS 774

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L +A+KF   +   G + +  T N L+   C++ ++  A  +  ++    V+PNV TYN+
Sbjct: 775  LDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNS 834

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L NG+ +  + +    +   +L NG       +  LI G+C+ G  K A  L  ++    
Sbjct: 835  LFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILG 894

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +       SA+I G    + ++ A ++   M+     P    F  LM T+C+  +  +A 
Sbjct: 895  VSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKAL 954

Query: 494  EVLLEMLEKCMAP-DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E L  ++E+C    D    + L SGL   G  + A KL+ +ME R + P
Sbjct: 955  E-LRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWP 1002



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 143/305 (46%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++L   Y+ R      +  + +M  +GF P   + +  +     S  +D+A+ F +++ 
Sbjct: 727  YNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLDVAVKFLRKIT 786

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                  + +TLN+++   C+   I+ A ++ K +  +G  P+V TYN+L +G        
Sbjct: 787  VEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFD 846

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             A    + + +NG  P    F TLI G C+ G +  A  +  EMK   VS   V  + +I
Sbjct: 847  EARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAII 906

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             G  +   ++    +   ML   I   + T+  L+   CKEG   KA  L   +++  + 
Sbjct: 907  RGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVK 966

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
             + + Y+ LI+G C   + + AF+LY+ M +    PN  I+ +L+ +F    ++   +E 
Sbjct: 967  LDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEK 1026

Query: 496  LLEML 500
            LL  L
Sbjct: 1027 LLRDL 1031



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/381 (22%), Positives = 166/381 (43%), Gaps = 3/381 (0%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            S++ G+L          +F+ +L      D+  + F++L   Y+ + K     D    MR
Sbjct: 659  SLVDGLLKEGHSKAALYMFEDMLNEGVQPDA--IAFNVLLDRYSRKGKMSKVNDILSTMR 716

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                   + + N  L        +      Y EM  +  +P+  T + ++  +CK G ++
Sbjct: 717  SRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLD 776

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             AV+  + +   GF     T N L+S  C +  + +A      +   G+ PNV T+N+L 
Sbjct: 777  VAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLF 836

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             GF +     EA  I   +     +P    + TLI G  ++GN +    L +EM   G+ 
Sbjct: 837  NGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVS 896

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               +  +A+I GL +  KT +A  ++  + +  ++P  +T++ L+   C   N  +A +L
Sbjct: 897  SQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALEL 956

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
               M +   + +   + +L+S  C + D   A ++  EM ++ + P++ I   L      
Sbjct: 957  RSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLC 1016

Query: 521  CGKDEL-AMKLFRKMEIRGLL 540
             G   + + KL R +  R L+
Sbjct: 1017 TGNYIVESEKLLRDLRTRELM 1037



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/320 (23%), Positives = 139/320 (43%), Gaps = 42/320 (13%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN    + +++ +CK+G ++ A+  +  M   G +    T + L++  C  G L  A  F
Sbjct: 441 PNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYF 500

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY--------- 371
            + M + G+ P+ +TF+ +I  +   G   +A  +F +M +    P+  TY         
Sbjct: 501 VDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLI 560

Query: 372 --------------------------NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
                                     NT++    + GN     +L +EM+ N    D  T
Sbjct: 561 GGHINEAKIFMHRPSSIPYAIGSTFYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFT 620

Query: 406 YNALILGLCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           Y +LI GLC++GK   A  L  + ++K  L PN + Y++L+ G     +S+ A  +++ M
Sbjct: 621 YTSLIAGLCRKGKMVPALLLSGRAIEKGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDM 680

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI---ILSELYSGLHHC 521
           +  G +P+   F +L+  + +     +  ++L  M  + +  +     IL   YS  H  
Sbjct: 681 LNEGVQPDAIAFNVLLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGM 740

Query: 522 GKDELAMKLFRKMEIRGLLP 541
            +     KL+ +M I G  P
Sbjct: 741 AR---CSKLYNEMIIHGFAP 757



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 6/248 (2%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V  ++ LI     + ++  A++   LM   G  P+V T N ++    K  ++      
Sbjct: 109 PAV--FDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSF 166

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F EM A  VSPNV T+N L+N   + G  +    L  +M   G     +TYN L+   CK
Sbjct: 167 FKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCK 226

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           +G+ K A+ L+  +    +  +  TY+ LI   C +  S + + + + M ++   PN+  
Sbjct: 227 KGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEIT 286

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRK 533
           +  L++   +      A +V  EM    + P+S+  + L  G  HC  G  E A++L   
Sbjct: 287 YNTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFG--HCSNGNIEEALRLCDV 344

Query: 534 MEIRGLLP 541
           M   GL P
Sbjct: 345 MVSHGLRP 352



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 85/437 (19%), Positives = 171/437 (39%), Gaps = 63/437 (14%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQ 218
           +++ G++      + +K+F+ +     +C+  P  + ++ L   +        A      
Sbjct: 289 TLINGLVKEGKIGVATKVFEEM----SLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDV 344

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M  +G  P   +    L+ +    +  +     + MR + +     +   ++   CK G+
Sbjct: 345 MVSHGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGL 404

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISG-------------------HCNKGLLSLAMK 319
           +E AV++  +M  +   P + T++ L++G                   +C  G L  A+ 
Sbjct: 405 LEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLKTGLVPNRVLHSTLIYNYCKMGNLKEALN 464

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
              +M ++G   +  T + L+  FC+ G+L EA      M    ++P+ VT++ +I+ YG
Sbjct: 465 AYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYG 524

Query: 380 QVGNSEMGASLYEEMLRNG-----------------------------------IKVDIL 404
             G++    S++++M   G                                     +   
Sbjct: 525 NSGDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGST 584

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YN ++    + G    A  L+ ++  N+ VP++ TY++LI G C +     A  L    
Sbjct: 585 FYNTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRA 644

Query: 465 IRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLE-MLEKCMAPDSIILSELYSGLHHCG 522
           I  G   PN  ++  L+    + E   +AA  + E ML + + PD+I  + L       G
Sbjct: 645 IEKGLLSPNPAMYTSLVDGLLK-EGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKG 703

Query: 523 KDELAMKLFRKMEIRGL 539
           K      +   M  R L
Sbjct: 704 KMSKVNDILSTMRSRSL 720


>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 418

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 217/409 (53%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++     D  S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKDSASAVFAAILETRGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A +     +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+FCK G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   +  +    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKLEIGTYTMIINEF------CKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 148/282 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L  ++    + R A   F  +  +G  P + S N  ++  +    ++     
Sbjct: 134 ASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L     TY+ +I   C + +     +L K M R G  P+
Sbjct: 374 SVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 114/222 (51%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K++I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/265 (22%), Positives = 120/265 (45%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  ++ LI+ +   G L  A++   L +++  +    T   ++    K          + 
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +   L   +  + + P+  TYS LI G C     + A +L+  M+ +G  PN   F 
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFT 245

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N   D A E+  +ML + ++PD I  + L  GL   G  + A  L  +M ++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P        I+ + + G+ E+ 
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETA 330


>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
          Length = 418

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 216/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K +  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF ++   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K++M+ +G+ P+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y +ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEX------CKKGDVWTGSKLLKEMQRXGYVP 414



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 148/282 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L   +    + R A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +T
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I+ D + Y ALI GLC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P   TY+ +I   C + +     +L K M R G  PN
Sbjct: 374 SVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPN 415



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 154/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FDSI  +  R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDSITKWGLR---PSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E+++ M S   +P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ +   VPN  T
Sbjct: 378 KPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 117/263 (44%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            ++ LI+ +   G L  A++   L +++  +    T   +I    K          + E 
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEES 127

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                  ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G  
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +   L   +  + + P+  TYS LI G C     + A +L+  M+ +G  PN   F  L
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+N   D A E+  +ML + + PD I  + L  GL   G  + A  L  +M ++GL
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307

Query: 540 LPKGFDKLRTINCAPENGEKESG 562
            P        I+   + G+ E+ 
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETA 330


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 228/465 (49%), Gaps = 22/465 (4%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W+ L  +   L   R  H  L        +L+F  WV       L   TH I
Sbjct: 6   YTFLTVHRWESLNCMKYRLASLRPVHGRL--------ALKFLNWVIKQPNLELNHVTHII 57

Query: 146 --VLHILTKNRKFKSSESILRGILDSDSFDLP---SKLFDSILYSYRMCDSSPLVFDLLF 200
               HIL + R +  +++ L+ +L      LP   + +F +++ +Y +C+S+P VFDLL 
Sbjct: 58  CTTTHILVRARMYNFAKTTLKHLLQ-----LPIGLNSVFGALMETYPICNSNPAVFDLLI 112

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           +     +   +A  TF  M   G  P + +CN  L SL+  ++VD+   F+K M    I 
Sbjct: 113 RVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGIC 172

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+V T N++++A C+ G  + A  + + ME  G  P+  TYNTL++ +C KG    A + 
Sbjct: 173 PDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQL 232

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + M   GI  +V T+N  I   C+  +  +   +   M+   V PN +TYNTLI+G+ +
Sbjct: 233 IDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVR 292

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  E+   +++EM    +  + +TYN LI G C  G   +A  L+  +  + L PN  T
Sbjct: 293 EGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVT 352

Query: 441 YSALITGQCVRKNSERAF--QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           Y AL+ G  + KN+E      + + M   G R +   +  ++   C+N   + A ++L +
Sbjct: 353 YGALLNG--LYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDD 410

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           ML+  + PD +  S L +G    GK   A ++  KM   GL+P G
Sbjct: 411 MLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNG 455



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 186/405 (45%), Gaps = 18/405 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           + T +I+L+ L +  KFK++  +LR + +S  +                   + + ++ L
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKMEESGVY------------------PTAVTYNTL 216

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y  + +++ A+     M   G    + + N F+ +L    R        K MRRN +
Sbjct: 217 LNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMV 276

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            PN  T N ++  F + G IE A +VF  M     +P+  TYNTLI+GHC  G +  A++
Sbjct: 277 YPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALR 336

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             ++M  +G++PN +T+  L+ G  K  +    + I   M+   V  + ++Y  +I+G  
Sbjct: 337 LMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLC 396

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E    L ++ML+  +  D++T++ LI G  + GK   A  ++  + K  LVPN  
Sbjct: 397 KNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGI 456

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            YS LI   C     + A   Y  M  SG   +     +L++TFC+    + A   +  M
Sbjct: 457 LYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHM 516

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               + P+S+    + +G  + G    A  +F KM   G  P  F
Sbjct: 517 SRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLF 561



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 158/359 (44%), Gaps = 4/359 (1%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           M   + + ++ L   +    K   AT  F +M  +  LP   + N  ++    +  +  A
Sbjct: 275 MVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEA 334

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L     M  + + PN  T   +++   K         + + M   G   S  +Y  +I G
Sbjct: 335 LRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDG 394

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G+L  A++  + M K  + P+V+TF+ LI GF + GK++ A  I  +M  T + PN
Sbjct: 395 LCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPN 454

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            + Y+TLI  Y ++G  +   + Y  M  +G   D  T N L+   C+ GK ++A Y + 
Sbjct: 455 GILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMN 514

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +  L PN+ T+  +I G     ++ +AF ++  M   G  P+   +  L+   C   
Sbjct: 515 HMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGG 574

Query: 488 DFDRAAEVLLEMLEKCM--APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             + A +    +  +C+  A D++I +   +     G    A+ L  +M     LP  F
Sbjct: 575 HINEALKFFHRL--RCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF 631



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/444 (22%), Positives = 186/444 (41%), Gaps = 75/444 (16%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D + + FD +   Y +      A   F +M  +G  P + +    L  L     ++ AL 
Sbjct: 522 DPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALK 581

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F+  +R    + +    N  + + C+ G +  A+ +   M +  F+P   TY  LI+G C
Sbjct: 582 FFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC 641

Query: 310 NKGLLSLAMK-------------------------------------FKNLMEKNGIQPN 332
            KG +  A+                                      F+ ++ K+ ++P+
Sbjct: 642 KKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKD-VEPD 700

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
            + FN +I  + +KGK  + N I S MK+ N+  N+ TYN L++GY +         LY+
Sbjct: 701 TVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYK 760

Query: 393 EMLRNGIKVDILTYNALILGLCK----------------EG------------------- 417
           +M+R+G   D  ++++LILG C+                EG                   
Sbjct: 761 DMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERN 820

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           + KKA  LVK +++  ++PN  TY+AL  G     +  +A ++ + ++ SG  P    + 
Sbjct: 821 EMKKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYI 880

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++  C+  +   A ++  EM    ++  ++ +S +  GL +  K E A+ +   M   
Sbjct: 881 TLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEM 940

Query: 538 GLLP--KGFDKLRTINCAPENGEK 559
            ++P    F  L  + C   N  K
Sbjct: 941 QIIPTVATFTTLMHVYCKEANVAK 964



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 170/393 (43%), Gaps = 13/393 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+  +   +   +L D +L      +   + F +L   +    K  NA +  C
Sbjct: 387 SYTAMIDGLCKNGMLEEAVQLLDDMLKV--SVNPDVVTFSVLINGFFRVGKINNAKEIMC 444

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDI-----ALGFYKEMRRNRISPNVYTLNMVMHA 272
           +M   G +P     N  L S L      +     AL  Y  M  +    + +T N+++  
Sbjct: 445 KMYKTGLVP-----NGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVAT 499

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           FC+ G +E A     +M  MG  P+  T++ +I+G+ N G    A    + M   G  P+
Sbjct: 500 FCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPS 559

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           + T+  L+ G C  G ++EA + F  ++    + + V +NT +    + GN     +L  
Sbjct: 560 LFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALIN 619

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVR 451
           EM+ N    D  TY  LI GLCK+GK   A  L  K ++K  L PN + Y++L+ G    
Sbjct: 620 EMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKH 679

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            ++  A  +++ M+     P+   F +++  + +     +  ++L  M  K +  +    
Sbjct: 680 GHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATY 739

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L  G            L++ M   G LP  F
Sbjct: 740 NILLHGYAKRHAMARCFMLYKDMIRHGFLPDKF 772



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 135/289 (46%), Gaps = 2/289 (0%)

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M+   +  N+ T N+++H + K   + R   ++K+M   GF+P   ++++LI G+C    
Sbjct: 727  MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              +A+K    +   G   +  TFN LI  FC++ ++ +A  +  +M    V PNV TYN 
Sbjct: 787  FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L NG  +  +      + + +L +G       Y  LI G+C+ G  K A  L  ++    
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +  +    SA++ G    K  E A  +   M+     P    F  LM  +C+  +  +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 494  EVLLEMLEKCMAP-DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E L  ++E C    D +  + L SGL   G  E A KL+ +M+ R L P
Sbjct: 967  E-LRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWP 1014



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/382 (21%), Positives = 168/382 (43%), Gaps = 6/382 (1%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQ 218
            S++ G+L          +F+ +L      D  P  + F+++   Y+ + K     D    
Sbjct: 671  SLVDGLLKHGHARAALYIFEEMLNK----DVEPDTVAFNVIIDQYSRKGKTSKVNDILST 726

Query: 219  MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
            M+       + + N  L        +      YK+M R+   P+ ++ + ++  +C+   
Sbjct: 727  MKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKS 786

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             + A+++ + +   G +    T+N LI+  C +  +  A +    M +  + PNV T+N 
Sbjct: 787  FDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNA 846

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            L  G  +    H+A+R+   +  +   P    Y TLING  +VGN +    L +EM   G
Sbjct: 847  LFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLG 906

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            I    +  +A++ GL    K + A +++  + +  ++P  +T++ L+   C   N  +A 
Sbjct: 907  ISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKAL 966

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            +L   M     + +   + +L+S  C N D + A ++  EM ++ + P++ I   L    
Sbjct: 967  ELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026

Query: 519  HHCGKDELAMKLFRKMEIRGLL 540
                    + KL R ++ R L+
Sbjct: 1027 CAGNYQIESEKLLRDIQDRELM 1048


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 190/350 (54%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP V D+L  TY    + ++A +    MRD G  P I  CN  L  LL ++ + +     
Sbjct: 46  SPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVR 105

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + M    ISP+VYT + ++ A+CK+   + A +V   M   G   +  TYN LI+G C  
Sbjct: 106 EFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRS 165

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A  FK  ME  G+ P+  T+  LI G CK  + +EA  +  EM    + PNVV Y
Sbjct: 166 GAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVY 225

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+G+ + GN++    + +EM+  G++ + +TY+ L+ GLCK G+  +A+ L+K + +
Sbjct: 226 ANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVR 285

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +S  P+  TY+ +I G     N + AF+L   M  +G  PN + + +++   CQ+ + ++
Sbjct: 286 DSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEK 345

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A+++L EM  K + P++ + + L SG    G   LA ++F KM    +LP
Sbjct: 346 ASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLP 395



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 160/333 (48%), Gaps = 35/333 (10%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A     EM    ISPNVYT ++++H  C+ G  E+A ++ + M + G  P+   Y  LIS
Sbjct: 311 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 370

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G +SLA +  + M K  + P++  +N+LIFG  K G++ E+ + F++M+   + P
Sbjct: 371 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 430

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK------VDIL---------------- 404
           N  TY+ LI+GY + G+ E    L + ML  G+K      +D+L                
Sbjct: 431 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 490

Query: 405 -------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
                         Y  LI  L   G  + A  ++ +++KN  VP+   YS+LI+G C  
Sbjct: 491 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKT 550

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + E+AF +   M + G  PN   +  L+   C++ D   A  V   +L K + P+ +  
Sbjct: 551 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 610

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L  G    G    A  L+ +M   G+ P  F
Sbjct: 611 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 643



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 151/298 (50%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            D A    KEM    + PN  T + ++   CK+G ++RA  + K M      P   TYN 
Sbjct: 238 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 297

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I GH        A +  + ME  GI PNV T++ +I G C+ G+  +A+ +  EM    
Sbjct: 298 IIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN   Y  LI+GY + GN  +   ++++M +  +  D+  YN+LI GL K G+ +++ 
Sbjct: 358 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 417

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                + +  L+PN  TYS LI G     + E A QL + M+ +G +PN  I+  L+ ++
Sbjct: 418 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 477

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +++D ++ +     ML++ +  D+ I   L   L   G  E A ++  ++E  G +P
Sbjct: 478 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP 535



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 6/303 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP V  L++++  + K G ++ A EV   M   G  PS+   N L+        ++L  K
Sbjct: 46  SPAV--LDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWK 103

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            +  M   GI P+V T++TLI  +CK  +   A ++  EM+      N VTYN LI G  
Sbjct: 104 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 163

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E      ++M   G+  D  TY ALI GLCK  ++ +A  L+ ++    L PN  
Sbjct: 164 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            Y+ LI G     N++ AF++ K M+ +G +PNK  ++ L+   C+    DRA+ +L +M
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 500 LEKCMAPDSIILSELYSG--LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +     PD+I  + +  G   HH  KD  A +L  +ME  G+ P  +     I+   ++G
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKD--AFRLLSEMENAGISPNVYTYSIMIHGLCQSG 341

Query: 558 EKE 560
           E E
Sbjct: 342 EPE 344



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 179/414 (43%), Gaps = 37/414 (8%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++++RG+      D  S L   ++      D+  + ++L+ + +      ++A     +M
Sbjct: 261 DNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHNKKDAFRLLSEM 318

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            + G  P + + +  +  L  S   + A    +EM    + PN +    ++  +C+ G +
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E+F  M  +  +P +  YN+LI G    G +  + K+   M++ G+ PN  T++ L
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY--------------------- 378
           I G+ K G L  A ++   M  T + PN V Y  L+  Y                     
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 379 --------------GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
                            GN E    +  E+ +NG   D+  Y++LI GLCK    +KA  
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           ++ ++ K  + PN   Y+ALI G C   +   A  ++ S++  G  PN   +  L+   C
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D   A  +  EML   + PD+ + S L +G    G  E AM L  +M +RG
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 3/365 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  L   Y        A + F +M     LP +   N  +  L    RV+ +  ++ +M
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGL 313
           +   + PN +T + ++H + K G +E A ++ + M   G  P+   Y  L+  +  +  +
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             ++  FK+++++  +  N I +  LI      G +  A R+ SE++     P+V  Y++
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRI-YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  +  + E    + +EM + G+  +I+ YNALI GLCK G    A  +   +    
Sbjct: 543 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN  TY++LI G C   +   AF LY  M+ +G  P+  ++ +L +      D ++A 
Sbjct: 603 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 662

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            ++ EM  +  A  S   + L  G    GK +  +KL   +  RGL+P        I+  
Sbjct: 663 FLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 721

Query: 554 PENGE 558
            E G+
Sbjct: 722 SEAGK 726



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 1/325 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y       +A     +M D G  P        L S   S+ ++     +K M    
Sbjct: 438 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 497

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +  +     +++H     G +E A  V   +E  G +P V  Y++LISG C       A 
Sbjct: 498 VMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAF 557

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M K G+ PN++ +N LI G CK G +  A  +F+ + A  + PN VTY +LI+G 
Sbjct: 558 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 617

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +VG+      LY EML  GI  D   Y+ L  G    G  ++A +L++++       + 
Sbjct: 618 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SI 676

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S+++ L+ G C R   +   +L   ++  G  PN    E ++S   +         + +E
Sbjct: 677 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 736

Query: 499 MLEKCMAPDSIILSELYSGLHHCGK 523
           + +K     +   S L+  + + GK
Sbjct: 737 LQQKTSESAARHFSSLFMDMINQGK 761



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 67/287 (23%), Positives = 124/287 (43%), Gaps = 24/287 (8%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           S +  D + + ++ L            A + F  +   G +P   +C  + S +  S +V
Sbjct: 564 SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP---NCVTYTSLIDGSCKV 620

Query: 245 -DIALGFY--KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            DI+  FY   EM    I+P+ +  +++       G +E+A+ + + M   G   S++++
Sbjct: 621 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSF 679

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N L+ G C +G +   +K  +++   G+ PN +T   +I G  + GKL E + IF E++ 
Sbjct: 680 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 739

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
                    +                +SL+ +M+  G K+ +   + +I   CKEG   K
Sbjct: 740 KTSESAARHF----------------SSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDK 782

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           A  L   +   S     S+Y A++   C +     A  L K M + G
Sbjct: 783 ALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829



 Score = 42.0 bits (97), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 76/191 (39%), Gaps = 31/191 (16%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQ-------------MRDYGFLPIIESCNKFLSSLLD 240
           L+ ++  + +A    F N  D FC+             +   G +P   +    +S L +
Sbjct: 664 LIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSE 723

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           + ++      + E+++        T       F  L         F +M + G IP +  
Sbjct: 724 AGKLSEVHTIFVELQQK-------TSESAARHFSSL---------FMDMINQGKIP-LDV 766

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM- 359
            + +I  HC +G L  A+  ++++          ++  ++   C+KGKL EA  +  EM 
Sbjct: 767 VDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMD 826

Query: 360 KATNVSPNVVT 370
           K  N+ P +V 
Sbjct: 827 KRGNLQPTLVA 837


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/436 (30%), Positives = 221/436 (50%), Gaps = 10/436 (2%)

Query: 111 HVLLKVQKDYVLSLEFFTWVQTHKP----SSLTLETHSIVLHILTKNRKFKSSES-ILRG 165
            VL + + D  L L+F   V  H P    SS +L   S ++H L + R+   +++ ILR 
Sbjct: 105 QVLFRCRGDLHLGLKFIGLVSYHFPNFKHSSXSL---SAMVHFLVRGRRLSEAQACILRM 161

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           +  S    +  K+ +S++ +     S  L++DLL +TY   KK R  ++ F  +R  G  
Sbjct: 162 VRKSGVSRV--KVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVS 219

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
             I +CNK L  L+ +  VD+A   Y E+ R  I  NVYTLN++++A CK    E  +  
Sbjct: 220 VSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFF 279

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
             +ME  G    + TYNTLI+ +C +GL+  A +  N     G++P ++T+N +++G CK
Sbjct: 280 LSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCK 339

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK   A  +  EM    ++PN  TYNTL+    +  N      +++EM R G+  D+++
Sbjct: 340 IGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +++LI  L + G   +A    ++++++ +VP+   Y+ LI G C       A ++   M+
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC  +   +   ++  C+ + F  A  +  EM+E+ M PD    + L  G    G  +
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ LF  M    L P
Sbjct: 520 KALNLFEAMVRTNLKP 535



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 172/356 (48%)

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           +S R  +   L ++ +        K+  A D   +M   G  P   + N  L  +   + 
Sbjct: 318 FSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDN 377

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +  A   + EM R  + P++ + + ++    + G + +A+  F+ ME  G +P    Y  
Sbjct: 378 ILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTI 437

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C  G LS A+K ++ M   G   +V+T+NT + G CKK    +A+ +F+EM    
Sbjct: 438 LIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P+  T+ TLI GY + GN +   +L+E M+R  +K D +TYN LI G CK G+  +A 
Sbjct: 498 MVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAK 557

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L  D+ +  ++P+  +Y  ++ G C       A  L   M+  G RPN      L+  +
Sbjct: 558 ELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGY 617

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C++ D  +A E L +M+   + PDS   + L  G       E A  L  +ME RGL
Sbjct: 618 CRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 156/286 (54%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + ++        +K F +A   F +M + G +P   +    +        +D 
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++ M R  + P+  T N ++  FCK G + RA E++ +M     IP   +Y T+++
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLN 580

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C+ GLL  A+   + M + GI+PN++T NTLI G+C+ G + +A    S+M +  + P
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP 640

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  +YNTLI+GY +  N E    L  EM + G++ +I+TYN ++ G C EGK ++A  ++
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVL 700

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + + +  + P+ +TYS+LI G   + N + AF+ +  M++ G  P+
Sbjct: 701 RKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 199/417 (47%), Gaps = 10/417 (2%)

Query: 128 TWVQTHKPSSLTLETHSIVLHILTK---NRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           T+VQ  K     L   S    IL +   +    +   +L G++ +   DL  +++  ++ 
Sbjct: 196 TYVQAKK-----LREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVR 250

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
                + +    +++       +KF N       M   G    I + N  +++      V
Sbjct: 251 G--GIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLV 308

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A           + P + T N +++  CK+G  +RA +V   M  +G  P+  TYNTL
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTL 368

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           +   C +  +  A +  + M + G+ P++++F++LI    + G L++A   F EM+ + +
Sbjct: 369 LVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGI 428

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ V Y  LI+G+ + G       + +EML  G  +D++TYN  + GLCK+     A  
Sbjct: 429 VPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L  ++ +  +VP+  T++ LI G C   N ++A  L+++M+R+  +P+K  +  L+  FC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  +  RA E+  +M+ K + PD I    + +G    G    A+ L  +M  +G+ P
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 181/383 (47%), Gaps = 39/383 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L      R     A + F +M   G LP + S +  +  L  +  +  AL  ++EM 
Sbjct: 365 YNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREME 424

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ I P+     +++  FC+ G +  A+++   M + G    V TYNT ++G C K + +
Sbjct: 425 RSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFA 484

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N M + G+ P+  TF TLI G+CK G + +A  +F  M  TN+ P+ VTYNTLI
Sbjct: 485 DADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLI 544

Query: 376 NGYGQVGNSEMGASLYEEMLR-----------------------------------NGIK 400
           +G+ + G       L+++M+R                                    GI+
Sbjct: 545 DGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIR 604

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++T N LI G C+ G   KA   +  +  N ++P++ +Y+ LI G     N E+AF L
Sbjct: 605 PNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M + G + N   + ++++ FC       A +VL +M+E  + PD    S L +G  H
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING--H 722

Query: 521 CGKDEL--AMKLFRKMEIRGLLP 541
             +D +  A +   +M  RGL+P
Sbjct: 723 VSQDNMKEAFRFHDEMLQRGLVP 745



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 151/314 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +       +A     +M   G    + + N FL+ L   +    A   + E
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YT   ++  +CK G +++A+ +F+ M      P   TYNTLI G C  G 
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M +  I P+ I++ T++ GFC  G L EA  +  +M    + PN+VT NT
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI GY + G+         +M+ NGI  D  +YN LI G  KE   +KA  L+ +++K  
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRG 672

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L  N  TY+ ++ G C     + A Q+ + MI  G  P+   +  L++     ++   A 
Sbjct: 673 LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAF 732

Query: 494 EVLLEMLEKCMAPD 507
               EML++ + PD
Sbjct: 733 RFHDEMLQRGLVPD 746


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 198/366 (54%), Gaps = 4/366 (1%)

Query: 180 DSILYSYRMCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           D++   YRM   +P    + F     + A +K++ +A     QM  +G    + S N  +
Sbjct: 79  DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     VD A+    +M +  I P+  T N +++  C  G I+ AV +F  M   G  
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V +YNT+I+G C  G   +A++    ME+N  +PNV+T+NT+I   CK   ++EA   
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            SEM    + P+VVTYNT+++G+  +G       L++EM+   +  D +T+N L+ GLCK
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCK 318

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EG   +A  + + + +    PNA TY+AL+ G C+    + A ++   MI  GC PN   
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +L++ +C+++  + A  +L EM EK + PD++  S L  GL   G+   A+ LF++M 
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438

Query: 536 IRGLLP 541
             GLLP
Sbjct: 439 SSGLLP 444



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 180/349 (51%), Gaps = 2/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L     +  K + A   F +M   G  P + S N  ++ L  +    +A+  +++
Sbjct: 167 ITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRK 226

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +NR  PNV T N ++ + CK  ++  AVE    M   G  P V TYNT++ G C+ G 
Sbjct: 227 MEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQ 286

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L+ A + FK ++ +N + P+ +TFN L+ G CK+G + EA  +   M      PN  TYN
Sbjct: 287 LNEATRLFKEMVGRN-VMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYN 345

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++GY      +    +   M+  G   ++ +YN LI G CK  +  +A  L+ ++ + 
Sbjct: 346 ALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           +L P+  TYS L+ G C       A  L+K M  SG  P+   + +L+  FC++   D A
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++L EM E+ + P+ I+ + L  G+   GK E+A +LF K+   G+ P
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRP 514



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 161/330 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M      P + + N  + SL     V+ A+ F  EM    I P+V T N ++H
Sbjct: 220 AVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILH 279

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC LG +  A  +FK M     +P   T+N L+ G C +G++S A      M + G +P
Sbjct: 280 GFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEP 339

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N  T+N L+ G+C   ++ EA ++   M     +PN+ +YN LINGY +         L 
Sbjct: 340 NAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM    +  D +TY+ L+ GLC+ G+ ++A  L K++  + L+P+   YS L+ G C  
Sbjct: 400 SEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH 459

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + + A +L K M     +PN  ++ +L+         + A E+  ++    + PD    
Sbjct: 460 GHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTY 519

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  GL   G  + A + FRKME  G LP
Sbjct: 520 NVMIKGLLKEGLSDEAYEFFRKMEDDGFLP 549



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 168/341 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +  +    +    A +   +M D G  P + + N  L       +++ A   +KE
Sbjct: 237 VTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKE 296

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+  T N+++   CK G++  A  V + M   G  P+  TYN L+ G+C    
Sbjct: 297 MVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQ 356

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K   +M   G  PN+ ++N LI G+CK  +++EA R+ SEM   N++P+ VTY+T
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ G  QVG      +L++EM  +G+  D++ Y+ L+ G CK G   +A  L+K++ +  
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN   Y+ LI G  +    E A +L+  +   G RP+   + +++    +    D A 
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           E   +M +    PDS   + +  G         A++L  +M
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEM 577



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 165/339 (48%), Gaps = 3/339 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   +    +   AT  F +M     +P   + N  +  L     V  A    + 
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN YT N +M  +C    ++ A++V   M   G  P++++YN LI+G+C    
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A +  + M +  + P+ +T++TL+ G C+ G+  EA  +F EM ++ + P+++ Y+ 
Sbjct: 392 MNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSI 451

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+ + G+ +    L +EM    IK +I+ Y  LI G+   GK + A  L   L  + 
Sbjct: 452 LLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ +I G      S+ A++ ++ M   G  P+   + +++  F QN+D   A 
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           +++ EM+ K  + DS     L     H   DE+  +  R
Sbjct: 572 QLIDEMVGKRFSADSSTFQMLLDLESH---DEIISRFMR 607



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 122/266 (45%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I+ A+  F  M  M   PSV  +   +     K   S A+   N M+  G+  NV + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   C+   +  A  +  +M    + P+ +T+NTLING    G  +    L+ EM+ +G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            + ++++YN +I GLCK G T  A  + + +++N   PN  TY+ +I   C  +    A 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +    M+  G  P+   +  ++  FC     + A  +  EM+ + + PD++  + L  GL
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G    A  +   M  +G  P  +
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAY 342



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 52/122 (42%)

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   +   +     +K    A  L   M   G   N +   +L++  C+    D A  V
Sbjct: 94  PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSV 153

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           + +M +  + PD+I  + L +GL + GK + A+ LF +M   G  P        IN   +
Sbjct: 154 MGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCK 213

Query: 556 NG 557
           NG
Sbjct: 214 NG 215


>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
          Length = 418

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    +  ++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S      + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 130/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++ D I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 222/457 (48%), Gaps = 53/457 (11%)

Query: 99  ALSTHLTPFRVKH---VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
            L  + + FR  H   VL+ ++ DY L L FF W    +  SL  E   IV  I T ++ 
Sbjct: 84  VLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRDPSL--EARCIVAQIATASKD 141

Query: 156 FKSSESILRGILDSDSFDL----PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
            K +  +++    + + D+      KLFD +L                            
Sbjct: 142 LKMARKLIQDFWVNPNLDVGVSFARKLFDKML---------------------------- 173

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSL---LDSERV----DIALGFYKEMRRNRISPNVY 264
                    +YG L  ++SCN F+S L   LD  ++    +  L   +EM+   + PN Y
Sbjct: 174 ---------NYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N V+   CK G +  A  V + M S G  P    Y TLI G C  G +S A +  + M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +K  I P+ IT+  +I G C+ G++ EA+++F EM    + P+ VTY  LI+GY + G  
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +   SL+ +ML+ G+  +I+TY AL  GLCK G+   A  L+ ++ +  L  N  TY++L
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G C   N ++A +L K M  +G  P+   +  LM  +C++ +  RA E+L +ML++ +
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P  +  + L +G    G  E   KL + M  +G++P
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMP 501



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 157/352 (44%), Gaps = 2/352 (0%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  +++ G+  +       KLF  ++   +  +   + +  L   Y    K + A   
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVC--KRLEPDEVTYTALIDGYCKEGKMKEAFSL 350

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             QM   G  P I +       L     VD A     EM R  +  N+YT N +++  CK
Sbjct: 351 HNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCK 410

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G I++AV++ K+ME  GF P   TY TL+  +C    +  A +    M    +QP V+T
Sbjct: 411 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 470

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           FN L+ GFC  G L +  ++   M    + PN  TYN+LI  Y    N      +Y  M 
Sbjct: 471 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 530

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+  D  TYN LI G CK    K+A +L +D+         S+Y+ALI G   RK   
Sbjct: 531 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 590

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            A +L++ M R G   ++ I+ +           +   E+  E +EKC+  D
Sbjct: 591 EARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGD 642



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 140/284 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + +M +  ++PN+ T   +    CK G ++ A E+   M   G   ++ TYN+L++
Sbjct: 347 AFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVN 406

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G +  A+K    ME  G  P+ +T+ TL+  +CK  ++  A+ +  +M    + P
Sbjct: 407 GLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQP 466

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            VVT+N L+NG+   G  E G  L + ML  GI  +  TYN+LI   C     +    + 
Sbjct: 467 TVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIY 526

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +    +VP+ +TY+ LI G C  +N + A+ L++ M+  G       +  L+  F + 
Sbjct: 527 RGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKR 586

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           + F  A E+  +M  + +  D  I +      +  GK EL ++L
Sbjct: 587 KKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLEL 630



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 2/247 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  + + D   KL   +  +    D+  + +  L   Y   ++   A +   QM 
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA--VTYTTLMDAYCKSREMVRAHELLRQML 460

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D    P + + N  ++    S  ++      K M    I PN  T N ++  +C    + 
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              E+++ M + G +P   TYN LI GHC    +  A      M   G    V ++N LI
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALI 580

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GF K+ K  EA  +F +M+   +  +   YN   +     G  E+   L +E +   + 
Sbjct: 581 KGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLV 640

Query: 401 VDILTYN 407
            DI T N
Sbjct: 641 GDIQTKN 647


>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           brasiliensis]
          Length = 427

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/422 (30%), Positives = 219/422 (51%), Gaps = 14/422 (3%)

Query: 128 TWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           TW+ +   S+   TL ++  ++H L  ++    ++ +++ ++        S +F +IL +
Sbjct: 1   TWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKXLIQVVVSRKGKGSASAVFAAILET 60

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
                S   VF  L   Y   +  R+A + +   R++ F    ++C K L  L+  +   
Sbjct: 61  KGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFK 120

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +  GFYK +       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL+
Sbjct: 121 LVWGFYKXILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G+   G L    + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + 
Sbjct: 181 NGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV 240

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN VT+ TLI+G+ + G  ++   +Y+ ML   +  D++TYN LI GLCK+G  K+A +L
Sbjct: 241 PNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHL 300

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    L P+  TY+ LI G C   + + AF+  K MI+     +   +  L+S  CQ
Sbjct: 301 IDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQ 360

Query: 486 NEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
                 A ++L EML   + P+    ++I++E       C K ++    KL ++M+  G 
Sbjct: 361 EGRSVDAEKMLREMLSVGLKPNXRTYTMIINEF------CKKGDVWKGSKLLKEMQRDGH 414

Query: 540 LP 541
           +P
Sbjct: 415 VP 416



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  KF     +   +L  ++    F L    +  IL     C   +S   F+
Sbjct: 87  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXIL----ECGYPASLYFFN 142

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 143 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 202

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 203 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 262

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G
Sbjct: 263 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 322

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I +D + Y ALI GLC+EG++  A  +++++    L PN
Sbjct: 323 CCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 382

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 383 XRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 426



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 116/225 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 203 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 262

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S   +P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI G
Sbjct: 263 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDG 322

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+K +
Sbjct: 323 CCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPN 382

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 383 XRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 108/217 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK M 
Sbjct: 211 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRML 270

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A  +   M   G  P   TY TLI G C +G L 
Sbjct: 271 SQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLD 330

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I  + + +  LI G C++G+  +A ++  EM +  + PN  TY  +I
Sbjct: 331 TAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMII 390

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 391 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427


>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 210/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H+L  ++    ++S+++ ++     D  S +F++IL +     S   VF  
Sbjct: 12  TLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A   F   + +      ++C K L  L++     +   FYKE+    
Sbjct: 72  LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++M  FCK G +  A  VF  +   G  PSV ++NTLI+G+   G L    
Sbjct: 132 YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G QP+V T++ LI G CK+GKL EAN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    ++   +Y++ML  G+  D++TYN LI GLCK+G+ K+   L+ ++  N L P+ 
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ LI G C   + E A +L   MI+   R +   +  L+S  C+      A ++L E
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +        + A KL R+M+  G LP
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLP 414



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 134/300 (44%), Gaps = 39/300 (13%)

Query: 174 LPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           L   +FD+I  +  R    S + F+ L   Y               M   G  P + + +
Sbjct: 154 LAQSVFDAITKWGLR---PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYS 210

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++ L    ++D A   + EM  N + PN  T   ++H  CK   ++ A+E++K M S 
Sbjct: 211 ILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ 270

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P + TYNTLI G C KG L       + M  NG++P+ I++ TLI G CK+G L   
Sbjct: 271 GLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDL--- 327

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                                           E+   L  +M++  I++D + Y ALI  
Sbjct: 328 --------------------------------EIALELRNKMIQESIRLDDVAYTALISC 355

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC+EG+   A  +++++    L P+  TY+ +I   C +++S+ A +L + M R G  P 
Sbjct: 356 LCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPG 415



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           + E+       ++  +N L+  + + G   +  S+++ + + G++  ++++N LI G  K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G   +   L   +  +   P+  TYS LI G C     + A +L+  M+ +G  PN   
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM--KLFRK 533
           F  L+   C+NE  D A E+  +ML + ++PD I  + L  GL  C K EL     L  +
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL--CKKGELKQVHDLIDE 301

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKE 560
           M + GL P        I+ + + G+ E
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLE 328


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 233/462 (50%), Gaps = 12/462 (2%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           S W  +  ++  L P  V   LL + K   L+  F   +       L  +T  + + +++
Sbjct: 58  SQWHFIEHVTDKLIPSLVSTTLLSLVKTPDLAFNFVNHIDLR---CLDFQTQCLAIAVVS 114

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFR 210
           K    KS   +L+ ++ +    +   LFD ++ ++ R+   S ++FD + + Y   +   
Sbjct: 115 KLSSPKSVTQLLKEVVSTRKNSV-RDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVD 173

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + F  M++ GF P  E+CN  LS L    R++ A  FY +M R  I  NVYT N+++
Sbjct: 174 EAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 233

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  CK G +++A      MES G  P++ TYNTL+ G+  +G +  A    + M+  G Q
Sbjct: 234 NVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQ 293

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++ T+N ++   C +G+   A+ +  EMK   + P+ V+YN LI G    G+ E   + 
Sbjct: 294 PDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAY 350

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM++ G+     TYN LI GL  E K + A  L++++ +  +V ++ TY+ +I G C 
Sbjct: 351 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQ 410

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             ++++AF L+  M+  G +P +  +  L+   C+      A E+  +++ K M PD ++
Sbjct: 411 HGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVM 470

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           ++ L  G    G  + A  L ++M+   + P       T NC
Sbjct: 471 MNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDV----TYNC 508



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 171/357 (47%), Gaps = 4/357 (1%)

Query: 186 YRM-CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           YRM   S+   F+++        K + A      M  +G  P I + N  +       R+
Sbjct: 218 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRI 277

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A     EM+     P++ T N ++   C  G   RA EV + M+ +G +P   +YN L
Sbjct: 278 EGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNIL 334

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G  N G L  A  +++ M K G+ P   T+NTLI G   + K+  A  +  E++   +
Sbjct: 335 IRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 394

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             + VTYN +INGY Q G+++   +L++EM+ +GIK    TY +LI  LC+  KT++A  
Sbjct: 395 VLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADE 454

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L + +    + P+    + L+ G C   N +RAF L K M R    P+   +  LM   C
Sbjct: 455 LFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLC 514

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               F+ A E++ EM  + + PD I  + L SG    G  + A  +  +M   G  P
Sbjct: 515 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNP 571



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 190/381 (49%), Gaps = 16/381 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
           T +I++++L K  K K ++  L GI++S         +++++  Y    R+  +  ++ +
Sbjct: 228 TFNIMINVLCKEGKLKKAKGFL-GIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISE 286

Query: 198 LLFKTYAHRKKFRN-----------ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           +  K +    +  N           A++   +M+  G +P   S N  +    ++  ++ 
Sbjct: 287 MKSKGFQPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLET 346

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  +  EM +  + P  YT N ++H       IE A  + + +   G +    TYN +I+
Sbjct: 347 AFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVIN 406

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G    A    + M  +GI+P   T+ +LI+  C++ K  EA+ +F ++    + P
Sbjct: 407 GYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKP 466

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++V  NTL++G+   GN +   SL +EM R  I  D +TYN L+ GLC EGK ++A  L+
Sbjct: 467 DLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELM 526

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++ +  + P+  +Y+ LI+G   + +++ AF +   M+  G  P    +  L+    +N
Sbjct: 527 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKN 586

Query: 487 EDFDRAAEVLLEMLEKCMAPD 507
           +D + A E+L EM  + + P+
Sbjct: 587 QDGELAEELLREMKSEGIVPN 607



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 108/199 (54%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + EM  + I P  +T   +++  C+      A E+F+ +   G  P +   NTL+ 
Sbjct: 417 AFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMD 476

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           GHC  G +  A      M++  I P+ +T+N L+ G C +GK  EA  +  EMK   + P
Sbjct: 477 GHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 536

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + ++YNTLI+GY + G+++    + +EML  G    +LTYNAL+ GL K    + A  L+
Sbjct: 537 DHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELL 596

Query: 427 KDLDKNSLVPNASTYSALI 445
           +++    +VPN S++ ++I
Sbjct: 597 REMKSEGIVPNDSSFCSVI 615



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 21/264 (7%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGI------LDSDSFDL----------PSKLFDSI 182
           T  T++ ++H L    K +++E ++R I      LDS ++++            K F   
Sbjct: 362 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAF--A 419

Query: 183 LYSYRMCDS---SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L+   M D    +   +  L      R K R A + F ++   G  P +   N  +    
Sbjct: 420 LHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 479

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  +D A    KEM R  I P+  T N +M   C  G  E A E+   M+  G  P   
Sbjct: 480 ATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 539

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  KG    A   ++ M   G  P ++T+N L+ G  K      A  +  EM
Sbjct: 540 SYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREM 599

Query: 360 KATNVSPNVVTYNTLINGYGQVGN 383
           K+  + PN  ++ ++I    +  N
Sbjct: 600 KSEGIVPNDSSFCSVIEAMSKSDN 623


>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rhodocnemis]
          Length = 428

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 212/417 (50%), Gaps = 2/417 (0%)

Query: 127 FTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           FTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL 
Sbjct: 1   FTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILE 60

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           +     S   VF  L   Y      R+A + +   R++      ++C K L  L+  +  
Sbjct: 61  TKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYF 120

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL
Sbjct: 121 KLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTL 180

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           ++G+   G L    + K+ M  +G+ P+V T++ LI G CK+ K+ +AN +F EM    +
Sbjct: 181 MNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGL 240

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN VT+ TLI+G+ + G  +    +Y+ ML   +  D++TYN LI GLCK+G  K+A  
Sbjct: 241 IPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHD 300

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L+ ++    L P+  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  C
Sbjct: 301 LIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           Q      A ++L EML   + PD+   + + +     G      KL ++M+  G  P
Sbjct: 361 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAP 417



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 88  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 143

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 144 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLAS 203

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G IP+  T+ TLI GHC  G +  A
Sbjct: 204 GVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFA 263

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 264 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 323

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 324 CCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPD 383

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 384 TGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 427



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD A+  YK M 
Sbjct: 212 YSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRML 271

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 272 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 331

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  +I
Sbjct: 332 TAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMII 391

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + + +++  EM+    +P+VVTYN L+NG
Sbjct: 392 NEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 133/302 (44%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T         C K L  L MK 
Sbjct: 68  DIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDT---------CRKVLEHL-MKL 117

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E+       ++  +N L++ + +
Sbjct: 118 K--------------YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCK 151

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+  +  S+++ + + G++  +++YN L+ G  + G   +   L   +  + ++P+  T
Sbjct: 152 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYT 211

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+   ML
Sbjct: 212 YSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRML 271

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ +
Sbjct: 272 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 331

Query: 561 SG 562
           + 
Sbjct: 332 TA 333


>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
          Length = 418

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 216/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY++     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I+ A  VF  +   G  P+  ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+  AN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 VTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLMKEMQRDGYVP 414



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 168/334 (50%), Gaps = 8/334 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLF-DSILYSYRMCDSSPLVFDL 198
           +I  + LTK  KF+    +   +L  ++    F L    + DS+   Y    +S   F++
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGY---PASLYFFNI 141

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +    + + A   F  +  +G  P   S N  ++  +    +D        M+ + 
Sbjct: 142 LMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASG 201

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LAM
Sbjct: 202 VQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ VTY TLI+G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGS 321

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P  
Sbjct: 322 CKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            TY+ +I   C + +     +L K M R G  P+
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPS 415



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + K ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +  R    + + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWGLR---PTAVSFNTLMNGYIRLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ +T+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 128/301 (42%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++  +   F     T   ++          L   F 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
               + G   ++  FN L+  FCK+G++  A  +F  +    + P  V++NTL+NGY ++
Sbjct: 125 EDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRL 184

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 185 GDLDEGFRLKNAMQASGVQ-----------------------------------PDVYTY 209

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 210 SVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+ + + G+ E+
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLET 329

Query: 562 G 562
            
Sbjct: 330 A 330


>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rubella]
          Length = 394

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 196/369 (53%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L ++  ++H L  ++    ++S+++ ++        S +F  IL +     S   VF  L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAVILETKGTQRSDIYVFSGL 60

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y      R+A + +   R++ F    ++C K L  L+  +   +  GFYKE+  +  
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGY 120

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             ++Y  N++MH FCK   I  A  VF  +   G  PSV +YNTL++G+   G L    +
Sbjct: 121 PASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ 
Sbjct: 181 LKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+  
Sbjct: 241 KNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 300

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ALI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L EM
Sbjct: 301 TYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 360

Query: 500 LEKCMAPDS 508
           L   + PD+
Sbjct: 361 LSVGLKPDA 369



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 164/323 (50%), Gaps = 6/323 (1%)

Query: 144 SIVLHILTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +I  + LT+  KF     +   +L  ++    F L    +  IL S     +S   F++L
Sbjct: 73  AIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEILESGY--PASLYFFNIL 130

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              +   +  R A   F  +  +G  P + S N  ++  +    +D        M  + +
Sbjct: 131 MHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGV 190

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA++
Sbjct: 191 QPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALE 250

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY  LI+G  
Sbjct: 251 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCC 310

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+A 
Sbjct: 311 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 370

Query: 440 TYSALITGQCVRKNSERAFQLYK 462
           TY+ +I   C + +  +  +L K
Sbjct: 371 TYTMIINEFCKKGDVWKGSKLLK 393



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 79/198 (39%), Gaps = 35/198 (17%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+AL  YK+M 
Sbjct: 197 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQML 256

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------- 305
              + P++ T N +++  CK G +++A ++   M   G  P   TY  LI          
Sbjct: 257 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLD 316

Query: 306 -------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                    SG C +G    A K    M   G++P+  T+  +I
Sbjct: 317 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMII 376

Query: 341 FGFCKKGKLHEANRIFSE 358
             FCKKG + + +++  E
Sbjct: 377 NEFCKKGDVWKGSKLLKE 394


>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
          Length = 418

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 210/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++ F  ++S+++ ++        S +F +I+ +     S   VF  
Sbjct: 12  TLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIIETKGNQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F    ++C K L  L+  +  ++   FY+E+    
Sbjct: 72  LITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEILECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 KLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G   +A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A +++ E
Sbjct: 312 ITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G  P
Sbjct: 372 MLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 414



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 170/329 (51%), Gaps = 10/329 (3%)

Query: 150 LTKNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLLFKTY 203
           LT+  KF     + + +L  ++    F+L    ++ IL     C   +S   F++L   +
Sbjct: 91  LTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEIL----ECGYPASLYFFNILMHRF 146

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
                 R A   F  +  +G  P + S N  ++  +    ++        M  + + P+V
Sbjct: 147 CKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDV 206

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           YT +++++  CK   ++ A E+F+ M   G +P+  T+ TLI GHC  G + LAM+    
Sbjct: 207 YTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQ 266

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M    + P++IT+NTLI+G CKKG L++A+ +  EM    + P+ +TY TLI+G  + G+
Sbjct: 267 MLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGD 326

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+  TY+ 
Sbjct: 327 LDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTM 386

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +I   C + +  +  +L K M R G  P+
Sbjct: 387 IINEFCKKGDVWKGSKLLKEMQRDGHAPS 415



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 113/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + + +  ++ L    ++D A   ++EM    + PN  T   ++   CK G 
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+EV+K M S   +P + TYNTLI G C KG L+ A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K D  TY  +I   CK+G   K + L+K++ ++   P+  T
Sbjct: 377 LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 105/210 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G + +A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLD 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 329 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 116/299 (38%), Gaps = 47/299 (15%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP   T    +H++C +       ++F   +S+  I  V +          KG  S +  
Sbjct: 3   SPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSL--IQVVVS---------RKGKGSASAV 51

Query: 320 FKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           F  ++E  G Q  ++  F+ LI  + + G L +A   +   +         T   ++   
Sbjct: 52  FAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHL 111

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++    +  + YEE+L  G    +  +N L+   CKEG  + A  +   + K  L P+ 
Sbjct: 112 VKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSV 171

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ L+ G     +    F+L  +M  SG +P+ + + +L++  C+    D A E    
Sbjct: 172 VSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANE---- 227

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
                                          LF +M ++GL+P G      I+   +NG
Sbjct: 228 -------------------------------LFEEMLVKGLVPNGVTFTTLIDGHCKNG 255


>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           citrodora]
          Length = 380

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 198/370 (53%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 10  TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 69

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++ F   +++C K L  L+  +   +  GFYKE+    
Sbjct: 70  LITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFYKEILECG 129

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++M  FCK G I  A  V   +   G  PSV ++NTLI+G+   G L    
Sbjct: 130 YPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPSVVSFNTLINGYIRLGDLDEGF 189

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 190 RLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGH 249

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G+ K+A  L+ ++    L P+ 
Sbjct: 250 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMSMEGLKPDK 309

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +  ++  L+S  CQ      A ++L E
Sbjct: 310 ITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLRE 369

Query: 499 MLEKCMAPDS 508
           ML   + P++
Sbjct: 370 MLSVGLKPNT 379



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/303 (22%), Positives = 123/303 (40%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++      F   + T   ++          L   F 
Sbjct: 63  DIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKVLEHLMKLKYFKLVWGFY 122

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G   ++  FN L+  FCK+G +  A  +           N +T           
Sbjct: 123 KEILECGYPASLYFFNILMQRFCKEGDIRVAQLVL----------NAIT----------- 161

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
                         + G++  ++++N LI G  + G   +   L   +  + + P+  TY
Sbjct: 162 --------------KWGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTY 207

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 208 SVLINGLCKESKMDDANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 267

Query: 502 KCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           + ++PD I  + L  GL  C K EL  A  L  +M + GL P        I+   + G+ 
Sbjct: 268 QSLSPDLITYNTLIYGL--CKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDM 325

Query: 560 ESG 562
           E+ 
Sbjct: 326 ETA 328


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 219/424 (51%), Gaps = 8/424 (1%)

Query: 122 LSLEFFTWVQTH-KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFD 180
           L L+FF W      PS+   +  + +   L     F  +  +L  ++ +  +  P  +  
Sbjct: 103 LLLDFFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRA--YPSPPVVLA 160

Query: 181 SILYSYRMCDS---SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           SI  +  + DS   SP V D+L  TY    + ++A +    MRD G  P I  CN  L  
Sbjct: 161 SIHRA--LSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKD 218

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           LL ++ + +     + M    ISP+VYT + ++ A+CK+   + A +V   M   G   +
Sbjct: 219 LLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLN 278

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYN LI+G C  G +  A  FK  ME  G+ P+  T+  LI G CK  + +EA  +  
Sbjct: 279 TVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLD 338

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    + PNVV Y  LI+G+ + GN++    + +EM+  G++ + +TY+ L+ GLCK G
Sbjct: 339 EMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMG 398

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +  +A+ L+K + ++S  P+  TY+ +I G     + + AF+L   M  +G  PN + + 
Sbjct: 399 QMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYS 458

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           +++   CQ+ + ++A+++L EM  K + P++ + + L SG    G   LA ++F KM   
Sbjct: 459 IMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKV 518

Query: 538 GLLP 541
            +LP
Sbjct: 519 NVLP 522



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 35/333 (10%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A     EM    ISPNVYT ++++H  C+ G  E+A ++ + M + G  P+   Y  LIS
Sbjct: 438 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 497

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G +SLA +  + M K  + P++  +N+LIFG  K G++ E+ + F++M+   + P
Sbjct: 498 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 557

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK------VDIL---------------- 404
           N  TY+ LI+GY + G+ E    L + ML  G+K      +D+L                
Sbjct: 558 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 617

Query: 405 -------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
                         Y  LI  L   G  + A  ++  ++KN  VP+   YS+LI+G C  
Sbjct: 618 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 677

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + E+AF +   M + G  PN   +  L+   C++ D   A  V   +L K + P+ +  
Sbjct: 678 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 737

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L  G    G    A  L+ +M   G+ P  F
Sbjct: 738 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 770



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 150/298 (50%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            D A    KEM    + PN  T + ++   CK+G ++RA  + K M      P   TYN 
Sbjct: 365 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 424

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I GH        A +  + ME  GI PNV T++ +I G C+ G+  +A+ +  EM    
Sbjct: 425 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 484

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN   Y  LI+GY + GN  +   ++++M +  +  D+  YN+LI GL K G+ +++ 
Sbjct: 485 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 544

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                + +  L+PN  TYS LI G     + E A QL + M+ +G +PN  I+  L+ ++
Sbjct: 545 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 604

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +++D ++ +     ML++ +  D+ I   L   L   G  E A ++   +E  G +P
Sbjct: 605 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 662



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 6/303 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP V  L++++  + K G ++ A EV   M   G  PS+   N L+        ++L  K
Sbjct: 173 SPAV--LDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWK 230

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            +  M   GI P+V T++TLI  +CK  +   A ++  EM+      N VTYN LI G  
Sbjct: 231 VREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLC 290

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E      ++M   G+  D  TY ALI GLCK  ++ +A  L+ ++    L PN  
Sbjct: 291 RSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 350

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            Y+ LI G     N++ AF++ K M+ +G +PNK  ++ L+   C+    DRA+ +L +M
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 500 LEKCMAPDSIILSELYSG--LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +     PD+I  + +  G   HH  KD  A +L  +ME  G+ P  +     I+   ++G
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKD--AFRLLSEMENAGISPNVYTYSIMIHGLCQSG 468

Query: 558 EKE 560
           E E
Sbjct: 469 EPE 471



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 37/414 (8%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++++RG+      D  S L   ++      D+  + ++L+ + +      ++A     +M
Sbjct: 388 DNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDAFRLLSEM 445

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            + G  P + + +  +  L  S   + A    +EM    + PN +    ++  +C+ G +
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E+F  M  +  +P +  YN+LI G    G +  + K+   M++ G+ PN  T++ L
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+ K G L  A ++   M  T + PN V Y  L+  Y +  + E  +S ++ ML  G+
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 400 KVD-----------------------------------ILTYNALILGLCKEGKTKKAAY 424
            +D                                   +  Y++LI GLCK    +KA  
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           ++ ++ K  + PN   Y+ALI G C   +   A  ++ S++  G  PN   +  L+   C
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D   A  +  EML   + PD+ + S L +G    G  E AM L  +M +RG
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/365 (26%), Positives = 170/365 (46%), Gaps = 3/365 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  L   Y        A + F +M     LP +   N  +  L    RV+ +  ++ +M
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGL 313
           +   + PN +T + ++H + K G +E A ++ + M   G  P+   Y  L+  +  +  +
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             ++  FK+++++  +  N I +  LI      G +  A R+ S ++     P+V  Y++
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRI-YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  +  + E    + +EM + G+  +I+ YNALI GLCK G    A  +   +    
Sbjct: 670 LISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN  TY++LI G C   +   AF LY  M+ +G  P+  ++ +L +      D ++A 
Sbjct: 730 LVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM 789

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            ++ EM  +  A  S   + L  G    GK +  +KL   +  RGL+P        I+  
Sbjct: 790 FLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGL 848

Query: 554 PENGE 558
            E G+
Sbjct: 849 SEAGK 853



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 142/325 (43%), Gaps = 1/325 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y       +A     +M D G  P        L S   S+ ++     +K M    
Sbjct: 565 LIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQG 624

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +  +     +++H     G +E A  V   +E  G +P V  Y++LISG C       A 
Sbjct: 625 VMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAF 684

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M K G+ PN++ +N LI G CK G +  A  +F+ + A  + PN VTY +LI+G 
Sbjct: 685 GILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGS 744

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +VG+      LY EML  GI  D   Y+ L  G    G  ++A +L++++       + 
Sbjct: 745 CKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SI 803

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S+++ L+ G C R   +   +L   ++  G  PN    E ++S   +         + +E
Sbjct: 804 SSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVE 863

Query: 499 MLEKCMAPDSIILSELYSGLHHCGK 523
           + +K     +   S L+  + + GK
Sbjct: 864 LQQKTSESAARHFSSLFMDMINQGK 888



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 97/414 (23%), Positives = 165/414 (39%), Gaps = 75/414 (18%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILD-------------------SDSFDLPSKLFDSI 182
           T+S ++H   KN   +S+E +++ +LD                   SD  +  S  F S+
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L    M D+   ++ +L    +       A      +   G +P +   +  +S L  + 
Sbjct: 621 LDQGVMLDNR--IYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTA 678

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             + A G   EM +  + PN+   N ++   CK G I  A  VF ++ + G +P+  TY 
Sbjct: 679 DREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYT 738

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPN------------------------------ 332
           +LI G C  G +S A    N M   GI P+                              
Sbjct: 739 SLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR 798

Query: 333 ----VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG------ 382
               + +FN L+ GFCK+GK+ E  ++   +    + PN +T   +I+G  + G      
Sbjct: 799 GHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVH 858

Query: 383 ---------NSEMGA----SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                     SE  A    SL+ +M+  G K+ +   + +I   CKEG   KA  L   +
Sbjct: 859 TIFVELQQKTSESAARHFSSLFMDMINQG-KIPLDVVDDMIRDHCKEGNLDKALMLRDVI 917

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
              S     S+Y A++   C +     A  L K M + G  P+++   +L++  
Sbjct: 918 VAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNL 971


>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
          Length = 418

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 217/409 (53%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    ++        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 112/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 109/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A   F +M D G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G+C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%)

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G   +   L   + 
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            + + P+  TYS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A E+  +ML + ++PD I  + L  GL   G  + A  L  +M ++GL P        I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 551 NCAPENGEKESG 562
           +   + G+ E+ 
Sbjct: 319 DGNCKEGDLETA 330


>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
          Length = 418

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
          Length = 418

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +JL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMIXEAKTLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K J  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L  ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +J  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 SCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 113/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 109/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M D G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 120/268 (44%)

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           I  +  ++ LI+ +   G L  A++   L +++  +    T   +J    K         
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWG 122

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
            + E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G   +   L   +  + + P+  TYS LI G C     + A +L+  M+ +G  PN  
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            F  L+   C+N   D A E+  +ML + ++PD I  + L  GL   G  + A  L  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKESG 562
            ++GL P        I+ + + G  E+ 
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETA 330


>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
          Length = 418

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGCMP 414



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLE----CGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R GC P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPS 415



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           herrerae]
          Length = 395

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 194/366 (53%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  L  
Sbjct: 2   SYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLIT 61

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      R+A + +   R++ F   ++ C K L  L+  +   +  GFYKE+       
Sbjct: 62  XYLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPA 121

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  N++MH FCK G I  A  VF  +   G  PSV ++NTL++G+   G L    + K
Sbjct: 122 SLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLK 181

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ + 
Sbjct: 182 NAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKN 241

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++   +Y++ML   +  D++TYN L  GLCK+G  K+A  L+ ++    L P+  TY
Sbjct: 242 GRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 301

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C   + E AF+  K MI+   R +  ++  L+S  CQ      A ++L EML 
Sbjct: 302 TTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLS 361

Query: 502 KCMAPD 507
             + P+
Sbjct: 362 VGLKPN 367


>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 418

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L  ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYAP 414



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 SCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPS 415



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++   P+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYAPSVVT 418



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 152/359 (42%), Gaps = 42/359 (11%)

Query: 209 FRNATDTFCQMRDY----GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           FR+   ++C M  +      +P  ++  + + S               E +  +IS ++Y
Sbjct: 9   FRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQIS-DIY 67

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
             + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK K  
Sbjct: 68  VFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKLK-- 115

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
                       +  L++GF            + E        ++  +N L++ + + G 
Sbjct: 116 ------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVKEGE 151

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
             +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  TYS 
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSV 211

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML + 
Sbjct: 212 LINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQS 271

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           ++PD I  + L  GL   G  + A  L  +M ++GL P        I+ + + G  E+ 
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETA 330


>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
          Length = 418

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M     +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A +    M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 130/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +   PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hederifolia]
          Length = 431

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 220/424 (51%), Gaps = 14/424 (3%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFATIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   V   L   Y      R+A + +   R++      ++C K L  L+  + 
Sbjct: 63  ETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L+   + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 183 LMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GL K+G  K+A 
Sbjct: 243 LIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY  LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 303 DLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIR 537
           CQ      A ++L EML   + PD    ++I++E       C K ++    KL ++M+  
Sbjct: 363 CQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEF------CKKGDVWKGSKLLKEMQRD 416

Query: 538 GLLP 541
           G +P
Sbjct: 417 GHVP 420



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    ++        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G IP+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G  KKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 267 MEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 387 DRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 430



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 132/303 (43%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y L+ ++ A+ + G +  A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 71  DIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLKYFKLVWG 128

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+   G  L   ML +G++                                   P+  
Sbjct: 189 RLGDLNEGFRLKSAMLASGVQ-----------------------------------PDVY 213

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +M
Sbjct: 214 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 273

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L +C+ PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 274 LSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDL 333

Query: 560 ESG 562
           ++ 
Sbjct: 334 DTA 336


>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
          Length = 418

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 216/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTLRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    ++        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+  TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G +P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPS 415



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+  T+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++   P+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 110/210 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A   F +M D G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G+C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G K  ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 133/308 (43%), Gaps = 37/308 (12%)

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLL 314
           +  +  ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L 
Sbjct: 59  KGTLRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLE 109

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L MK K              +  L++GF            + E        ++  +N L
Sbjct: 110 HL-MKLK--------------YFKLVWGF------------YEENLECGYPASLYFFNIL 142

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + + G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + +
Sbjct: 143 MHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGV 202

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E
Sbjct: 203 QPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAME 262

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           +  +ML + ++PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322

Query: 555 ENGEKESG 562
           + G+ E+ 
Sbjct: 323 KEGDLETA 330


>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
           asparagoides]
          Length = 418

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K +  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF ++   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K++M+ +G+QP+V T + LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y +ML   +  D++TYN LI GLCK+G  K+   L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRXGYXP 414



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L   +    + R A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L +   +  EM    + P+ +T
Sbjct: 254 NGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I++D   Y ALI GLC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P   TY+ +I   C + +     +L K M R G  PN
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPN 415



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 151/341 (44%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FDSI  +  R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDSITKWGLR---PSVVSFNTLMNGYIKIGDLDEGFRLKSVM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E+++ M S   +P + TYNTLI G C KG L       + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  +   Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ +    PN  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 117/265 (44%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  ++ LI+ +   G L  A++   L +++  +    T   +I    K          + 
Sbjct: 66  IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYE 125

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  K G
Sbjct: 126 ESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIG 185

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +   L   +  + + P+  T+S LI G C     + A +L+  M+ +G  PN   F 
Sbjct: 186 DLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFT 245

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N   D A E+  +ML + + PD I  + L  GL   G  +    L  +M ++
Sbjct: 246 TLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMK 305

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P        I+   + G+ E+ 
Sbjct: 306 GLKPDKITYTTLIDGNCKEGDLETA 330


>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
          Length = 418

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMRPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  MI +G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|356513957|ref|XP_003525674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Glycine max]
          Length = 626

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 222/446 (49%), Gaps = 9/446 (2%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           H+ P  +  +LL+ Q D+   L FF WV+     + TL  + +++HIL  +R F  + ++
Sbjct: 83  HMGPHEISRILLRCQSDHSSVLTFFNWVKNDLNITPTLHNYCVIVHILAWSRVFSHAMNL 142

Query: 163 LRGIL---DSDSFDLP--SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           L  ++   + +   +P    ++++++     C+ +P +FD+L K Y           TF 
Sbjct: 143 LSELIQLVEVEGVCVPPNDGIYENLVECTEDCNWNPAIFDMLIKAYVKAGMVEKGLATFR 202

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +  +  F+P + +CN  LS L     +      Y+EM R  I  N YT N++ H  CK G
Sbjct: 203 RNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMGRLGIHRNAYTFNIMTHVLCKDG 262

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             ++       ME  GF P + TYNTL++ +C K  L  A     +M   G+ PN+IT  
Sbjct: 263 DTDKVTRFLDKMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHT 322

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G C++GK+ EA+++F +M    + P+VV+YNTL++GY + G  +M  SL  EM+ N
Sbjct: 323 VLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGN 382

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV--RKNSE 455
           GI  D +T   ++ G  ++GK   A   V +L +  +      Y  LI   C+  R  + 
Sbjct: 383 GICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAA 442

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           R+F L  S  + G  P  + +  L+ + C+  + + A  +  EM+++ M  + +    + 
Sbjct: 443 RSFLLRIS--QDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVI 500

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L    +   A  L  +M   G+LP
Sbjct: 501 SCLCRVNRTLEAEGLLEEMVSSGILP 526



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 135/279 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P + + N  ++S     R++ A   YK M    + PN+ T  ++M+  C+ G
Sbjct: 273 KMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEG 332

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A ++F  M   G  P V +YNTL+SG+C +G + +     + M  NGI P+ +T  
Sbjct: 333 KVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGNGICPDSVTCR 392

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            ++ GF + GKL  A     E+K   +      Y+ LI      G      S    + ++
Sbjct: 393 LIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAARSFLLRISQD 452

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G    I TYN L+  LCK    ++A  L  ++ K S++ N   Y A+I+  C    +  A
Sbjct: 453 GYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISCLCRVNRTLEA 512

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
             L + M+ SG  P+  I   L++ +C+    D+A  +L
Sbjct: 513 EGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLL 551



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 118/276 (42%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L        K + A   F QM   G  P + S N  +S      ++ +      EM  N
Sbjct: 323 VLMNGLCEEGKVKEAHQLFHQMVHRGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIGN 382

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+  T  +++  F + G +  A+     ++          Y+ LI   C +G    A
Sbjct: 383 GICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFAA 442

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             F   + ++G  P + T+N L+   CK   + EA  + SEM   ++  N+V Y  +I+ 
Sbjct: 443 RSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVISC 502

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             +V  +     L EEM+ +GI  D+    ALI G C+E K  KA  L+K       V +
Sbjct: 503 LCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVYD 562

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
             +Y+A++   C   N     +L   +++ G   N+
Sbjct: 563 TESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNR 598



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 113/286 (39%), Gaps = 2/286 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+ +        +LF  +++  R  D   + ++ L   Y    K +       +M  
Sbjct: 324 LMNGLCEEGKVKEAHQLFHQMVH--RGIDPDVVSYNTLVSGYCREGKMQMCRSLLHEMIG 381

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P   +C   +       ++  AL    E++R RI       + ++ A C  G    
Sbjct: 382 NGICPDSVTCRLIVEGFARDGKLLSALNTVVELKRFRIKIPEDLYDYLIVALCIEGRPFA 441

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A      +   G++P + TYN L+   C    +  A+  K+ M K  +  N++ +  +I 
Sbjct: 442 ARSFLLRISQDGYMPKINTYNKLVESLCKFNNVEEALILKSEMVKRSMILNLVAYRAVIS 501

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C+  +  EA  +  EM ++ + P+V     LINGY +    +   SL +         
Sbjct: 502 CLCRVNRTLEAEGLLEEMVSSGILPDVEISRALINGYCEENKVDKAVSLLKFFANEFQVY 561

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           D  +YNA++   C  G   +   L   L K   V N  T   +I G
Sbjct: 562 DTESYNAVVKVFCDVGNVAELLELQDKLLKVGYVSNRLTCKYVIHG 607



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 5/162 (3%)

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           ++ LI    K G  +K     +   +   +PN    + L++G        + + +Y+ M 
Sbjct: 181 FDMLIKAYVKAGMVEKGLATFRRNIEACFIPNVIACNCLLSGLSRFNYIGQCWAVYEEMG 240

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           R G   N + F ++    C++ D D+    L +M E+   PD +  + L +   +C K  
Sbjct: 241 RLGIHRNAYTFNIMTHVLCKDGDTDKVTRFLDKMEEEGFEPDLVTYNTLVNS--YCKKRR 298

Query: 526 L--AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE-KESGGL 564
           L  A  L++ M IRG++P        +N   E G+ KE+  L
Sbjct: 299 LEDAFYLYKIMYIRGVMPNLITHTVLMNGLCEEGKVKEAHQL 340


>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 418

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 210/403 (52%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H+L  ++    ++S+++ ++     D  S +F++IL +     S   VF  
Sbjct: 12  TLHSYCTMIHLLCTHQMLIEAKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A   F   + +      ++C K L  L++     +   FYKE+    
Sbjct: 72  LMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++M  FCK G +  A  VF  +   G  PSV ++NTLI+G+   G L    
Sbjct: 132 YPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G QP+V T++ LI G CK+GKL EAN +F+EM    + PN VT+ TLI+G+
Sbjct: 192 RLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    ++   +Y++ML  G+  D++TYN LI GLCK+G+ K+   L+ ++  N L P+ 
Sbjct: 252 CKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ LI G C   + E A +L   MI+   R +   +  L+S  C+      A ++L E
Sbjct: 312 ISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLRE 371

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +        + A KL R+M+  G +P
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVP 414



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 4/268 (1%)

Query: 174 LPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           L   +FD+I  +  R    S + F+ L   Y               M   G  P + + +
Sbjct: 154 LAQSVFDAITKWGLR---PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYS 210

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++ L    ++D A   + EM  N + PN  T   ++H  CK   ++ A+E++K M S 
Sbjct: 211 ILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQ 270

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P + TYNTLI G C KG L       + M  NG++P+ I++ TLI G CK+G L  A
Sbjct: 271 GLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIA 330

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             + ++M   ++  + V Y  LI+   + G +     +  EML  G+K D  TY  +I  
Sbjct: 331 LELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINE 390

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            CK+  +K A+ L++++ ++  VP   T
Sbjct: 391 FCKKRDSKTASKLLREMQRDGPVPGVVT 418



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 98/207 (47%), Gaps = 4/207 (1%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           + E+       ++  +N L+  + + G   +  S+++ + + G++  ++++N LI G  K
Sbjct: 124 YKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIK 183

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G   +   L   +  +   P+  TYS LI G C     + A +L+  M+ +G  PN   
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM--KLFRK 533
           F  L+   C+NE  D A E+  +ML + ++PD I  + L  GL  C K EL     L  +
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGL--CKKGELKQVHDLIDE 301

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKE 560
           M + GL P        I+ + + G+ E
Sbjct: 302 MIMNGLKPDKISYTTLIDGSCKEGDLE 328


>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           alba]
          Length = 413

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 207/402 (51%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L ++  ++H L  ++ F  ++S+++ ++        S +F +IL +     S   VF  L
Sbjct: 1   LHSYCTMIHFLCTHQMFSEAKSLIQXVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 60

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y      R+A + +   R++      ++C K L  L+      +  GFY+E+     
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    +
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ 
Sbjct: 181 LKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHC 240

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  ++   +Y++ML   +  D++TYN LI GLCK+G   +A  L+ ++    L P+  
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C   + + AF+  K MI+   R +   +  ++S  CQ      A ++L EM
Sbjct: 301 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREM 360

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 402



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 174/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 73  AIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL----ECGYPASLYFFN 128

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 129 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 188

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 189 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 248

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L++A+ +  EM    + P+  TY TLI+G
Sbjct: 249 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDG 308

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y A+I GLC+EG+   A  +++++    L P+
Sbjct: 309 CCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPD 368

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 369 TGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMN 412



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 53  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLRYFKLVWG 110

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++                                   P+  
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQ-----------------------------------PDVY 195

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +M
Sbjct: 196 TYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 255

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L + + PD I  + L  GL   G    A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 256 LSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 315

Query: 560 ESG 562
           ++ 
Sbjct: 316 DAA 318



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 197 YSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 256

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G + +A  +   M   G  P   TY TLI G C +G L 
Sbjct: 257 SQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 316

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  +I
Sbjct: 317 AAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMII 376

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + + +++  EM+     P+V TYN L+NG
Sbjct: 377 NEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 238/476 (50%), Gaps = 15/476 (3%)

Query: 80  DFVNIAYSHLIHSDWKKLTAL-STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           + VN   + L   +W+ L  L S  L+P  V  V+ K   D    L+FF WVQ     S 
Sbjct: 40  NIVNEITTFLNQKNWESLLPLVSNKLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQ 99

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD-------- 190
            L++ SI+  IL  +R F  ++S++  ++   S    S++ DS++ S +  D        
Sbjct: 100 KLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGY-SEILDSLIKSCKEFDLNNVNGNE 158

Query: 191 -----SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
                   +VF+LL   Y  +  F  A   F   +  GF+  +  CN  LS LL + +++
Sbjct: 159 NSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLE 218

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +   FY  M    +  +VYT   +++A  + G  +    +   ME  G  PS+ TYN +I
Sbjct: 219 LFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVI 278

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C  G +  A + K LM+K G+  +V T++ LI GF K+ +  EA  +  EM +  + 
Sbjct: 279 GGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLK 338

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P  V Y  LI+G+ + G+S     + EEML  G+K+++ TYNAL+ G+CK G  +KA  L
Sbjct: 339 PGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADAL 398

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    + P+  TY+ +I G    +N+ R   L   M +S   P  +   M+++  C+
Sbjct: 399 LNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCR 458

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   + A+ V   M+   + P+++I + L  G    G+ + A+++ + M+ +G+ P
Sbjct: 459 HGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQP 514



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 179/373 (47%), Gaps = 35/373 (9%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P  ++ N  +   L  +          EM+++ + P  YT  M+++  C+ G IE A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             VF+ M S+G  P+   Y TLI GH  +G    A++   +M+K G+QP+V+ +N++I G
Sbjct: 466 SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIG 525

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK-- 400
            CK  K+ EA     EM    + PNV TY  LI+GY + G  ++    ++EML  GI   
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN 585

Query: 401 ---------------------------------VDILTYNALILGLCKEGKTKKAAYLVK 427
                                             D+ TY+ALI GL + GK + A  L+ 
Sbjct: 586 DVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLS 645

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +  +  LVP+  TY+++I+G C +    +AFQL++ M + G  PN   +  L++  C+  
Sbjct: 646 EFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAG 705

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           + +RA E+   +  K +A +++  + +  G    G    A +LF +M ++G+ P  F   
Sbjct: 706 EIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYS 765

Query: 548 RTINCAPENGEKE 560
             I+   + G  E
Sbjct: 766 ALIDGCRKEGNTE 778



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 3/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+    S +  S++F+ I+ S  +   + +++  L K +    +F+ A      M  
Sbjct: 452 IINGLCRHGSIEDASRVFE-IMVSLGV-KPNAVIYTTLIKGHVQEGRFQEAVRILKVMDK 509

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P +   N  +  L  S +++ A  +  EM    + PNVYT   ++H +CK G ++ 
Sbjct: 510 KGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQV 569

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A   FK M   G  P+      LI G+C +G  + A      M    + P+V T++ LI 
Sbjct: 570 ADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIH 629

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G  + GKL  A  + SE     + P+V TYN++I+G+ + G       L+E M + GI  
Sbjct: 630 GLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISP 689

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I+TYNALI GLCK G+ ++A  L   +    L  NA TY+ +I G C   N  +AF+L+
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G  P+  ++  L+    +  + ++A  + LE ++K  A  S  L+ L  G    
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKS 808

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A +L   M  + + P
Sbjct: 809 GKVIEANQLLEDMVDKHVKP 828



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 169/363 (46%), Gaps = 5/363 (1%)

Query: 187 RMCDSSPLVFD-----LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++ D   LV D     +L   +  +K+   A     +M   G  P   +    +   +  
Sbjct: 295 KLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQ 354

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
                A    +EM    +  N++T N ++   CK G +E+A  +   M  +G  P   TY
Sbjct: 355 GDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N +I G+  +   S      + M+K+ + P   T   +I G C+ G + +A+R+F  M +
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS 474

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V PN V Y TLI G+ Q G  +    + + M + G++ D+L YN++I+GLCK  K ++
Sbjct: 475 LGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEE 534

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   + ++ +  L PN  TY ALI G C     + A + +K M+  G  PN  +   L+ 
Sbjct: 535 AKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALID 594

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +C+      A  +   ML + + PD    S L  GL   GK + AM+L  +   +GL+P
Sbjct: 595 GYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP 654

Query: 542 KGF 544
             F
Sbjct: 655 DVF 657



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 3/321 (0%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           D E+ D  L    EM    I P+  T N ++  + K     R  ++   M+    +P+  
Sbjct: 391 DMEKADALL---NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAY 447

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T   +I+G C  G +  A +   +M   G++PN + + TLI G  ++G+  EA RI   M
Sbjct: 448 TCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVM 507

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               V P+V+ YN++I G  +    E       EM+  G+K ++ TY ALI G CK G+ 
Sbjct: 508 DKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEM 567

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A    K++    + PN    +ALI G C   ++  A  +++ M+     P+   +  L
Sbjct: 568 QVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSAL 627

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +    +N     A E+L E LEK + PD    + + SG    G    A +L   M  +G+
Sbjct: 628 IHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGI 687

Query: 540 LPKGFDKLRTINCAPENGEKE 560
            P        IN   + GE E
Sbjct: 688 SPNIITYNALINGLCKAGEIE 708



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 34/390 (8%)

Query: 208  KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
            K + A +   +  + G +P + + N  +S       +  A   ++ M +  ISPN+ T N
Sbjct: 636  KLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYN 695

Query: 268  MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             +++  CK G IERA E+F  +   G   +  TY T+I G+C  G LS A +  + M   
Sbjct: 696  ALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLK 755

Query: 328  GIQPNVITF----------------------------------NTLIFGFCKKGKLHEAN 353
            G+ P+   +                                  N L+ GFCK GK+ EAN
Sbjct: 756  GVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEAN 815

Query: 354  RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++  +M   +V P+ VTY  LI+ + + G  +     + +M +  +  + LTY AL+ G 
Sbjct: 816  QLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGY 875

Query: 414  CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
               G+  +   L  ++    + P+  T+S +I       +  +  +L   M++ G   +K
Sbjct: 876  NMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSK 935

Query: 474  HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            ++  +L+   C+ E      +VL ++ E+ +       S L    H  GK + A ++ + 
Sbjct: 936  NVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKS 995

Query: 534  MEIRGLLPKGFDKLRTINCAPENGEKESGG 563
            M     +P   +    IN   ++ + E+ G
Sbjct: 996  MVRFKWVPDSTELNDLINVEQDSTDSENAG 1025



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 167/395 (42%), Gaps = 24/395 (6%)

Query: 140  LETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPS------------KLFDSIL 183
            + T+S ++H L +N K + +  +L   L+     D F   S            K F   L
Sbjct: 621  VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQ--L 678

Query: 184  YSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
            + Y MC    SP  + ++ L        +   A + F  +   G      +    +    
Sbjct: 679  HEY-MCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYC 737

Query: 240  DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
             S  +  A   + EM    + P+ +  + ++    K G  E+A+ +F      GF  S +
Sbjct: 738  KSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTS 796

Query: 300  TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            + N L+ G C  G +  A +    M    ++P+ +T+  LI   CK G L EA + F +M
Sbjct: 797  SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDM 856

Query: 360  KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            +  N+ PN +TY  L++GY   G      +L++EM+   I+ D +T++ +I    KEG  
Sbjct: 857  QKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDH 916

Query: 420  KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             K   LV D+ K     + +    LI   C +++     ++ + +   G   +      L
Sbjct: 917  VKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTL 976

Query: 480  MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +  F +    D AA VL  M+     PDS  L++L
Sbjct: 977  VRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDL 1011



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 102/249 (40%), Gaps = 17/249 (6%)

Query: 160  ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK-------TYA-----HRK 207
            ES+ +G   + S +    L D    S ++ +++ L+ D++ K       TY      H K
Sbjct: 786  ESVQKGFASTSSLN---ALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCK 842

Query: 208  K--FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
                + A   F  M+    +P   +    LS    + R       + EM    I P+  T
Sbjct: 843  TGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVT 902

Query: 266  LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
             ++++ A  K G   + +++  +M   G   S    + LI   C K  +S  +K    +E
Sbjct: 903  WSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIE 962

Query: 326  KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
            + G+  ++ T +TL+  F K GK+  A R+   M      P+    N LIN      +SE
Sbjct: 963  EQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSE 1022

Query: 386  MGASLYEEM 394
                  ++M
Sbjct: 1023 NAGDFLKQM 1031


>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 846

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 244/513 (47%), Gaps = 49/513 (9%)

Query: 60  NRNPIPIPHRTLPEPKGQDLDFVNIAYS-------HLIHSDWKKLTALSTHLTPFRVKHV 112
           + NPI  P   L  P     + VN+  +       HL H    +   +  HL    +  V
Sbjct: 52  DSNPISSPFYNLLPPTHNPNNIVNLISTALKQKSFHLSHFQ-TQFKTILPHLGAHEISRV 110

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           L++ Q D   +L FF WV+     +L+L+ + +++HIL  N+ F  +  +L  ++  ++ 
Sbjct: 111 LIRTQSDASSALTFFNWVKNDLRFTLSLQNYCLIVHILGWNQIFDQAMKLLCELIQLNNV 170

Query: 173 DLPS--KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           ++ S   ++  ++     C+ +P++FD+L K Y          +TF +  +  F+P + +
Sbjct: 171 NVVSYDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVA 230

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  L+ L     +      Y+EM R  I  N YT N++ H  C+ G  ++     + ME
Sbjct: 231 CNCLLNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKME 290

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             GF P + TYN LI+G+C K  L  A     +M   G+ PN+I+++ L+ G CK+GK+ 
Sbjct: 291 EEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIK 350

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS-EMGASLYEEMLRNGIKVDILT---- 405
           EA+++F++M    + P+VV+YNTLI+GY + G   +M  SL  EM+  GI+ D +T    
Sbjct: 351 EAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIV 410

Query: 406 -------------------------------YNALILGLCKEGKTKKA-AYLVKDLDKNS 433
                                          Y+ L++ LCKEG+   A ++L++      
Sbjct: 411 FQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGD 470

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            VP  STY  L    C   N E A  L   M +   + N   ++ ++S  C+ +    A 
Sbjct: 471 YVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAE 530

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            +L EM+   + PD  I   L +G  +C ++++
Sbjct: 531 NLLEEMVSLGILPDLEIKRALING--YCEENDV 561



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/339 (23%), Positives = 148/339 (43%), Gaps = 37/339 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P + + N  ++      R++ A   YK M    + PN+ + + +M+  CK G
Sbjct: 288 KMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEG 347

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITF 336
            I+ A ++F  M   G  P V +YNTLISG+C +G  + +     + M   GI+P+ +T 
Sbjct: 348 KIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTC 407

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVS------------------------------- 365
             +  G+ ++GKL  A  + +E++   +                                
Sbjct: 408 RIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQ 467

Query: 366 -----PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
                P + TY  L        N E    L  EM +  +K+++ TY A+I  LC+  +T 
Sbjct: 468 DGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTS 527

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A  L++++    ++P+     ALI G C   + ++A  L K   +     +   +  ++
Sbjct: 528 EAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIV 587

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
             FC+  +     E+  ++++    P+S+    +  GL 
Sbjct: 588 KVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQ 626



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/316 (21%), Positives = 132/316 (41%), Gaps = 37/316 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y  +++  +A   +  M   G +P + S +  ++ L    ++  A   + +
Sbjct: 299 VTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNLISYSALMNGLCKEGKIKEAHQLFNQ 358

Query: 254 MRRNRISPNVYTLNMVMHAFCKLG-IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           M +  I P+V + N ++  +CK G  ++    +   M  +G  P   T   +  G+  +G
Sbjct: 359 MVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREG 418

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK------------------------ 348
            L  A+     +++ GI+     ++ L+   CK+G+                        
Sbjct: 419 KLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTY 478

Query: 349 ------------LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                       + EA  + SEM   ++  N+ TY  +I+   +V  +    +L EEM+ 
Sbjct: 479 IKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSEAENLLEEMVS 538

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            GI  D+    ALI G C+E    KA  L+K   K   V +  +Y+A++   C   N   
Sbjct: 539 LGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIVKVFCEVGNVAE 598

Query: 457 AFQLYKSMIRSGCRPN 472
             +L   +++ G  PN
Sbjct: 599 LMELQDKLVKIGYVPN 614



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 121/294 (41%), Gaps = 8/294 (2%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK-KFRNATDTF 216
           S  +++ G+          +LF+ ++   R  D   + ++ L   Y     K +      
Sbjct: 335 SYSALMNGLCKEGKIKEAHQLFNQMVQ--RGIDPDVVSYNTLISGYCKEGGKMQMCRSLL 392

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN--RISPNVYTLNMVMHAFC 274
            +M   G  P   +C           ++  AL    E++R   +I  N+Y   +V  A C
Sbjct: 393 HEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLV--ALC 450

Query: 275 KLGIIERAVEVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           K G    A      +   G ++P ++TY  L    C+   +  A+  K+ M K  ++ N+
Sbjct: 451 KEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNL 510

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T+  +I   C+  +  EA  +  EM +  + P++     LINGY +  + +   SL + 
Sbjct: 511 TTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKF 570

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +     D  +YNA++   C+ G   +   L   L K   VPN+ T   +I G
Sbjct: 571 FAKEFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRG 624



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 94/220 (42%), Gaps = 3/220 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE-RVDIALGFYKEMRR 256
           ++F+ Y    K  +A +   +++ +G + I E+   +L   L  E R   A  F   + +
Sbjct: 409 IVFQGYTREGKLLSALNMVAELQRFG-IKIPENLYDYLLVALCKEGRPFAARSFLIRISQ 467

Query: 257 N-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P + T   +  + C    +E A+ +   M       ++TTY  +IS  C     S
Sbjct: 468 DGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSMKLNLTTYKAIISCLCRVKRTS 527

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   GI P++     LI G+C++  + +A  +           +  +YN ++
Sbjct: 528 EAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAKEFQVYDTESYNAIV 587

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             + +VGN      L +++++ G   + LT   +I GL K
Sbjct: 588 KVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGLQK 627


>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
          Length = 418

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 215/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH F K G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYKP 414



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +    + R A   F  +  +G  P + S N  ++  +    ++        M+ +
Sbjct: 141 ILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G +P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPS 415



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 4/280 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++ G +      L   +FD+I  +  R    S + F+ L   Y               M+
Sbjct: 142 LMHGFVKEGEIRLAQSVFDAITKWGLR---PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TLI
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+K
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            +I TY  +I   CK+G     + L+K++ ++   P+  T
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++G+ +
Sbjct: 115 K--------------YFKLVWGF------------YEENLECGYPASLYFFNILMHGFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 140/473 (29%), Positives = 228/473 (48%), Gaps = 11/473 (2%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           ++ S W  +  +S +LTP  + +VL  +     L  +F   +  H    L  +++ + + 
Sbjct: 78  VLSSQWHFIEQVSPNLTPALISNVLYNLCSKPQLVSDFIHHLHPH---CLDTKSYCLAVV 134

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRK 207
           +L +    K +  +L+ ++++       +LFD +  S  R+   S +VFDLL        
Sbjct: 135 LLARLPSPKLALQLLKQVMET-RIATNRELFDELTLSRDRLSVKSSIVFDLL------EG 187

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K + A +    M   GF P + S N  +        ++ A      MR   I P+ YT  
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G +E A  +F  M  +G +P+  TYNTLI G+CNKG L  A  +++ M K 
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI P+V T+N L+     +G++ EA+ +  EM+   + P+ +TYN LINGY + GN++  
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRA 367

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L+ EML  GI+   +TY +LI  L +  + K+A  L + +    + P+   ++A+I G
Sbjct: 368 FDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDG 427

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C   N ERAF L K M R    P++  F  LM   C+    + A  +L EM  + + PD
Sbjct: 428 HCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD 487

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            I  + L SG    G  + A  +  +M   G  P        I C  +N E +
Sbjct: 488 HISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGD 540



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 162/311 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A+  F +M + G +P   + N  +    +   ++ A  +  EM +  I P+V T N
Sbjct: 258 RLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYN 317

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++HA    G +  A ++ K M   G IP   TYN LI+G+   G    A    N M   
Sbjct: 318 LLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK 377

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+P  +T+ +LI+   ++ ++ EA+ +F ++    VSP+V+ +N +I+G+   GN E  
Sbjct: 378 GIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERA 437

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L +EM R  +  D +T+N L+ G C+EGK ++A  L+ ++    + P+  +Y+ LI+G
Sbjct: 438 FMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISG 497

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
              R + + AF +   M+  G  P    +  L+   C+N++ D A E+L EM+ K ++PD
Sbjct: 498 YGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 557

Query: 508 SIILSELYSGL 518
                 L  G+
Sbjct: 558 DSTYLSLIEGM 568



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 153/322 (47%), Gaps = 37/322 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      +  S LFD ++    + ++  + ++ L   Y ++     A     +M 
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNA--VTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + + N  + +L    R+  A    KEMR+  I P+  T N++++ + + G  +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 281 RAVEVFKNMESMGFIPSVTTY-----------------------------------NTLI 305
           RA ++   M S G  P+  TY                                   N +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            GHC  G +  A      M++  + P+ +TFNTL+ G C++GK+ EA  +  EMK   + 
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIK 485

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+ ++YNTLI+GYG+ G+ +    + +EML  G    +LTYNALI  LCK  +   A  L
Sbjct: 486 PDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEEL 545

Query: 426 VKDLDKNSLVPNASTYSALITG 447
           +K++    + P+ STY +LI G
Sbjct: 546 LKEMVNKGISPDDSTYLSLIEG 567



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 109/220 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y+     + A D   +M   G  P   +    +  L    R+  A   +++
Sbjct: 349 ITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    +SP+V   N ++   C  G +ERA  + K M+     P   T+NTL+ G C +G 
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    + M+  GI+P+ I++NTLI G+ ++G + +A  +  EM +   +P ++TYN 
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           LI    +    ++   L +EM+  GI  D  TY +LI G+
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 21/262 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPLVFD 197
           ++ T+++++H L    +   ++ +++ +       +P  + ++ ++  Y  C ++   FD
Sbjct: 312 SVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI--IPDAITYNILINGYSRCGNAKRAFD 369

Query: 198 L------------------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           L                  L    + R + + A D F ++ D G  P +   N  +    
Sbjct: 370 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHC 429

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  V+ A    KEM R  + P+  T N +M   C+ G +E A  +   M+  G  P   
Sbjct: 430 ANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHI 489

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           +YNTLISG+  +G +  A   ++ M   G  P ++T+N LI   CK  +   A  +  EM
Sbjct: 490 SYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549

Query: 360 KATNVSPNVVTYNTLINGYGQV 381
               +SP+  TY +LI G G V
Sbjct: 550 VNKGISPDDSTYLSLIEGMGNV 571


>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
          Length = 418

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 214/408 (52%), Gaps = 12/408 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  L
Sbjct: 13  LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGL 72

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E      
Sbjct: 73  ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGY 132

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    +
Sbjct: 133 PASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR 192

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ 
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+  
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 500 LEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           L   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 373 LSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      ++M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 156/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A     +M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
          Length = 418

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 216/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L+   
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 FTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWXGSKLLKEMQRDGYKP 414



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 168/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    ++        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+  TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G +P+
Sbjct: 381 IGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPS 415



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 110/222 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+  T+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++   P+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/210 (29%), Positives = 110/210 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A   F +M D G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G+C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G K  ++T
Sbjct: 389 NEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEENLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 209 YSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           velutina]
          Length = 406

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/395 (30%), Positives = 204/395 (51%)

Query: 147 LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           +H L  ++ F  ++S+L+ ++        S +F +IL +     S   VF  L   Y   
Sbjct: 1   IHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLES 60

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
              R+A + +   R +      ++C K L  L+  +   +  GFY+E+       ++Y  
Sbjct: 61  GFLRDAIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFF 120

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N++MH FCK G I  A  VF  +   G  PS  +YNTL++G+   G+L    + K+ M  
Sbjct: 121 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLA 180

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +G+QP+V T++ LI G CK+ K+ +A+ +F EM    + PN VT+ TLI+G+ + G  ++
Sbjct: 181 SGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 240

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ D+ +  L P+  TY+ LI 
Sbjct: 241 AMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLID 300

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C       AF+  K +I+   R +  ++  L+S  CQ      A ++L EML   + P
Sbjct: 301 GCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNP 360

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+   + + +     G      KL ++M+  G +P
Sbjct: 361 DTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 395



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 171/344 (49%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 66  AIECYXLTRKHKLWVPFDTCRKVLEYLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 121

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P   S N  ++  +    +D        M  +
Sbjct: 122 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLAS 181

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 182 GVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 241

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  +M    + P+ +TY TLI+G
Sbjct: 242 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 301

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G         + +++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 302 CCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 361

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 362 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMN 405



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 116/225 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 182 GVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 241

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S   +P + TYNTLI G C KG L  A    + M + G++P+ IT+ TLI G
Sbjct: 242 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDG 301

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      +   N+  + V Y  LI+G  Q G S     +  EML  G+  D
Sbjct: 302 CCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPD 361

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+K++ ++  VP+  TY+ L+ G
Sbjct: 362 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 114/217 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 190 YSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 249

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++  +M   G  P   TY TLI G C +G+L 
Sbjct: 250 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLV 309

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  + +  I+ + + +  LI G C++G+  +A ++  EM +  ++P+  TY  +I
Sbjct: 310 SAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMII 369

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L +EM R+G    ++TYN L+ G
Sbjct: 370 NEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 101/248 (40%), Gaps = 36/248 (14%)

Query: 311 KGLLSLAMKFKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           KG  S +  F  ++E  G Q  ++  F+ LI  + + G L +A   +   +   +     
Sbjct: 24  KGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFD 83

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T   ++    ++   ++    YEE+L  G    +  +N L+   CK+G  + A  +   +
Sbjct: 84  TCRKVLEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAI 143

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K  L P+A +Y+ L+ G       +  F+L  +M+ SG +P+ + +             
Sbjct: 144 TKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTY------------- 190

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
                                 S L +GL    K + A +LF +M ++GL+P G      
Sbjct: 191 ----------------------SVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTL 228

Query: 550 INCAPENG 557
           I+   +NG
Sbjct: 229 IDGHCKNG 236


>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           rehmannii]
          Length = 420

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 205/403 (50%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++   +H L  ++ F  ++S+++ ++          +F +IL +     S   VF  
Sbjct: 7   TLHSYCTTIHFLCTHQMFSEAKSLIQVVVSRKGKGSAXAVFAAILETKGTQRSDIYVFSG 66

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++      ++C K L  L+      +  GFY+E+    
Sbjct: 67  LITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEILECG 126

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 127 YPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 186

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+  + +AN +F EM    + PN VT+ TLI+G+
Sbjct: 187 RLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGH 246

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  DJ+TYN L+ GLCK+G   +A  L+ ++    L P+ 
Sbjct: 247 CKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDK 306

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 307 FTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLRE 366

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 367 MLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVP 409



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 175/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 80  AIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL----ECGYPASLYFFN 135

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        MR +
Sbjct: 136 ILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRAS 195

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 196 GVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLA 255

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTL++G CKKG L++A+ +  EM    + P+  TY TLI+G
Sbjct: 256 MEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDG 315

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 316 CCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPD 375

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P    + +LM+
Sbjct: 376 TGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMN 419



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 130/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T         C K L  L MK 
Sbjct: 60  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDT---------CRKVLEHL-MKL 109

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           +              +  L++GF            + E+       ++  +N L++ + +
Sbjct: 110 R--------------YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCK 143

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+  +   +++ + + G++  +++YN L+ G  + G   +   L   +  + + P+  T
Sbjct: 144 DGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYT 203

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+  +ML
Sbjct: 204 YSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQML 263

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + + PD I  + L  GL   G    A  L  +M  +GL P  F     I+   + G+ +
Sbjct: 264 SQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLD 323

Query: 561 SG 562
           + 
Sbjct: 324 AA 325


>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
          Length = 418

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L   +    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLNVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G +
Sbjct: 198 QVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G+ P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++  +   F     T   ++          L   F 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
               + G   ++  FN L+  F K+G++  A  +F  +   ++ P+VV++NTL+NGY ++
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 185 GDLDEGFRLKNAMQVSGVQ-----------------------------------PDVYTY 209

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 210 SVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E+
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLET 329

Query: 562 G 562
            
Sbjct: 330 A 330


>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           turbinata]
          Length = 413

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 209/408 (51%), Gaps = 12/408 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  L
Sbjct: 1   LHSYCTMIHFLCTHQMLSEAKSLIQLVVSRKGKGSASVVFATILETKGTQRSDIYVFSGL 60

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y      R+A + +   R++      ++C K L  L+      +  GFY+E+     
Sbjct: 61  ITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEILECGY 120

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    +
Sbjct: 121 PASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFR 180

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            K+ M  NG+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ 
Sbjct: 181 LKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHC 240

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  ++   +Y+ ML   +  D++TYN LI GLCK G  K+A  L+ ++    L P+  
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKF 300

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L EM
Sbjct: 301 TYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREM 360

Query: 500 LEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           L   + PD    ++I++E       C K ++    KL ++M+  G  P
Sbjct: 361 LSVGLKPDIGTYTMIINEF------CKKGDVWKGSKLLKEMQRNGHAP 402



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 73  AIECYRLTREHKLWVPFDTCRKMLEHLMKLRYFKLVWGFYEEIL----ECGYPASLYFFN 128

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  N
Sbjct: 129 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAN 188

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G IP+  T+ TLI GHC  G + LA
Sbjct: 189 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLA 248

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CK G L +A+ +  EM    + P+  TY TLI+G
Sbjct: 249 MEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 308

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 309 CCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPD 368

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 369 IGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMN 412



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G +P   +    +     + RVD+A+  YK M 
Sbjct: 197 YSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRML 256

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 257 SQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 316

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A K  K ++++N                                  G++P++ T+  +I
Sbjct: 317 TAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMII 376

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + + +++  EM+    +P+VVTYN L+NG
Sbjct: 377 NEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 132/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T         C K +L   MK 
Sbjct: 53  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDT---------CRK-MLEHLMKL 102

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           +              +  L++GF            + E+       ++  +N L++ + +
Sbjct: 103 R--------------YFKLVWGF------------YEEILECGYPASLYFFNILMHRFCK 136

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+  +  S+++ + + G++  +++YN L+ G  + G   +   L   +  N + P+  T
Sbjct: 137 DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYT 196

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+   ML
Sbjct: 197 YSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRML 256

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ +
Sbjct: 257 SQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 316

Query: 561 SG 562
           + 
Sbjct: 317 TA 318


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 186/365 (50%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++ +S++ +Y  C S+PLVFDLL +TY   +K R   + F  ++  G    I +CN  L 
Sbjct: 11  EIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLG 70

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L+    VD+A   Y+E+ R+ +  NVYTLN++++A CK   IE       +ME  G  P
Sbjct: 71  GLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP 130

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V TYNTLI+ +C +GLL  A +  + M   G++P V T+N +I G CK GK   A  + 
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 190

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM    +SP+  TYN L+    +  N      +++EM   G+  D+++++ALI  L K 
Sbjct: 191 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A    +D+    L P+   Y+ LI G C       A ++   M+  GC  +   +
Sbjct: 251 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             +++  C+ +    A E+  EM E+ + PD    + L +G    G    A+ LF  M  
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370

Query: 537 RGLLP 541
           R L P
Sbjct: 371 RNLKP 375



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 218/447 (48%), Gaps = 38/447 (8%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF-DLPSKLFD 180
           L+ E +  V       + + T +I+++ L KN+K ++++S L  + +   F D+ +  ++
Sbjct: 80  LAWEIYQEV-VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVT--YN 136

Query: 181 SILYSY----------RMCDS------SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDY 222
           +++ +Y           + DS       P VF  + +        K+  A     +M   
Sbjct: 137 TLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKI 196

Query: 223 GFLP--------IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
           G  P        ++E C     +++D+ER+      + EM    + P++ + + ++    
Sbjct: 197 GMSPDTATYNILLVECCRN--DNMMDAERI------FDEMPSQGVVPDLVSFSALIGLLS 248

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G +++A++ F++M++ G  P    Y  LI G C  G++S A+K ++ M + G   +V+
Sbjct: 249 KNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVV 308

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+NT++ G CK+  L EA+ +F+EM    V P+  T+ TLINGY + GN     +L+E M
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++  +K D++TYN LI G CK  + +K   L  D+    + PN  +Y  LI G C     
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             AF+L+  M+  G          ++  +C+  +  +A E L  ML K + PD I  + L
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +G       + A  L  KME  GLLP
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLP 515



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 201/418 (48%), Gaps = 41/418 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  +  +     + D +L      D++   +++L           +A   F +M 
Sbjct: 172 AIINGLCKTGKYLRAKGVLDEMLKIGMSPDTA--TYNILLVECCRNDNMMDAERIFDEMP 229

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + S +  +  L  +  +D AL ++++M+   ++P+     +++  FC+ G++ 
Sbjct: 230 SQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMS 289

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI----------- 329
            A++V   M   G +  V TYNT+++G C + +LS A +    M + G+           
Sbjct: 290 EALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLI 349

Query: 330 ------------------------QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                                   +P+V+T+NTLI GFCK  ++ + N ++++M +  + 
Sbjct: 350 NGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN ++Y  LINGY  +G       L++EM+  G +  I+T N ++ G C+ G   KA   
Sbjct: 410 PNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEF 469

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    +VP+  TY+ LI G    +N +RAF L   M  SG  P+   + ++++ F +
Sbjct: 470 LSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSR 529

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
                 A  ++L+M+E+ + PD    + L +G  H  ++ L  A ++  +M  RG +P
Sbjct: 530 QGRMQEAELIMLKMIERGVNPDRSTYTSLING--HVTQNNLKEAFRVHDEMLQRGFVP 585



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 151/284 (53%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +       K    A + F +M + G  P   +    ++       ++ A+
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++ M +  + P+V T N ++  FCK   +E+  E++ +M S    P+  +Y  LI+G+
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 422

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN G +S A +  + M + G +  +IT NT++ G+C+ G   +A+   S M    + P+ 
Sbjct: 423 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 482

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLING+ +  N +   +L  +M  +G+  D++TYN ++ G  ++G+ ++A  ++  
Sbjct: 483 ITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 542

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +  + P+ STY++LI G   + N + AF+++  M++ G  P+
Sbjct: 543 MIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 145/315 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +        A     +M + G +  + + N  L+ L   + +  A   + E
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YT   +++ + K G + +AV +F+ M      P V TYNTLI G C    
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +    +  N M    I PN I++  LI G+C  G + EA R++ EM        ++T NT
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ GY + GN+         ML  GI  D +TYN LI G  KE    +A  LV  ++ + 
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TY+ ++ G   +   + A  +   MI  G  P++  +  L++      +   A 
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 572

Query: 494 EVLLEMLEKCMAPDS 508
            V  EML++   PD 
Sbjct: 573 RVHDEMLQRGFVPDD 587



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 71/155 (45%)

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           L ++ L+    +  K ++     + L    L  + +  ++L+ G       + A+++Y+ 
Sbjct: 28  LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQE 87

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           ++RSG + N +   ++++  C+N+  +     L +M EK + PD +  + L +     G 
Sbjct: 88  VVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGL 147

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            E A +L   M  +GL P  F     IN   + G+
Sbjct: 148 LEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182


>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
          Length = 418

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L   +    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLNVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 167/335 (49%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 153/341 (44%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G +
Sbjct: 198 QVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G+ P+ IT+ TL
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/301 (23%), Positives = 127/301 (42%), Gaps = 35/301 (11%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  + ++ A+ + G +  A+E ++  +   F     T   ++          L   F 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFY 124

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
               + G   ++  FN L+  F K+G++  A  +F  +   ++ P+VV++NTL+NGY ++
Sbjct: 125 EESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKL 184

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ + G  L   M  +G++                                   P+  TY
Sbjct: 185 GDLDEGFRLKNAMQVSGVQ-----------------------------------PDVYTY 209

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E+  +ML 
Sbjct: 210 SVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLS 269

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E+
Sbjct: 270 QSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLET 329

Query: 562 G 562
            
Sbjct: 330 A 330


>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           rugosa]
          Length = 414

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 207/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +I  +     S   VF  
Sbjct: 1   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSG 60

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +    ++ F    ++C K L  L+  +   +  GFY+E+    
Sbjct: 61  LITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 120

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 121 YPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 180

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K  +AN +F EM    + PN V + TLI+G+
Sbjct: 181 RLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGH 240

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A +L+ ++    L P+ 
Sbjct: 241 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDK 300

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R ++  +  L+S  C       A ++L E
Sbjct: 301 ITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLRE 360

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G +P
Sbjct: 361 MLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVP 403



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 164/328 (50%), Gaps = 6/328 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLLFKTYAHRKKFRNAT 213
           F +   +L  ++    F L    ++ IL     C   +S   F++L   +      R A 
Sbjct: 90  FDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFNILMHRFCKDGDIRJAQ 145

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F  +  +G  P + S N  ++  +    +D        M  + + P+VYT +++++  
Sbjct: 146 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGX 205

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK    + A E+F  M   G +P+   + TLI GHC  G + LAM+    M    + P++
Sbjct: 206 CKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDL 265

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+NTLI+G CKKG L +A+ +  EM    + P+ +TY TLI+G  + G+ +      + 
Sbjct: 266 ITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKR 325

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M++   ++D + Y ALI GLC EG++  A  +++++    L P+A TY+ +I   C + +
Sbjct: 326 MIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGD 385

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             +  +L K M R G  P+   + +LM+
Sbjct: 386 VWKGSKLLKEMQRDGHVPSVVTYNVLMN 413


>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 418

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 213/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++ +++ ++        S +F +JL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMIPEAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K +  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y +ML   +  D++TYN LI GLCK+G  K+A  L  ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 149/282 (52%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L  ++    + R A   F  +  +G  P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G + LAM+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +T
Sbjct: 254 NGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P   TY+ +I   C + +     +L K M R G  P+
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 112/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++  M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 108/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M D G +P   +    +     + RVD+A+  Y +M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 61/268 (22%), Positives = 121/268 (45%)

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           I  +  ++ LI+ +   G L  A++   L +++  +    T   +I    K         
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
            + E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G   +   L   +  + + P+  TYS LI G C     + A +L+  M+ +G  PN  
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            F  L+   C+N   D A E+  +ML + ++PD I  + L  GL   G  + A  L  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKESG 562
            ++GL P        I+ + + G+ E+ 
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETA 330


>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
           microphylla]
          Length = 418

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 213/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F  IL +     S   VF  
Sbjct: 12  TLQSYCSMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G   +   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E A +  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 SCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 112/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 109/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M D G +P   +    +     + RV +A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/304 (22%), Positives = 133/304 (43%), Gaps = 37/304 (12%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAM 318
           + ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L M
Sbjct: 63  TSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-M 112

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K K              +  L++GF            + E        ++  +N L++ +
Sbjct: 113 KLK--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSF 146

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G   +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+ 
Sbjct: 147 VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDV 206

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS LI G C     + A +L+  M+ +G  PN   F  L+   C+N     A E+  +
Sbjct: 207 YTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQ 266

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           ML + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+ + + G+
Sbjct: 267 MLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGD 326

Query: 559 KESG 562
            E+ 
Sbjct: 327 LETA 330


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/371 (32%), Positives = 197/371 (53%), Gaps = 3/371 (0%)

Query: 195 VFDLLFKTYAHRKK---FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           V DLL   Y+ + K   F    + F  + + G  P +++CN  LSSL+ +  V ++   +
Sbjct: 126 VVDLLIHVYSTQFKHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVF 185

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    ++P+VY  + +++AFC  G ++ A+E+F+ ME +G  P+V TYN +I G C  
Sbjct: 186 DIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKN 245

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A +FK  MEK  ++P+++T+  LI G  K  +  EAN I  EM     +PN V Y
Sbjct: 246 GRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVY 305

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NTLI+GY ++GN      + ++M+ NGI  + +T N+LI G CK  + + A +L++++  
Sbjct: 306 NTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              V N  T++++I   C++   + A      M+    +PN  +  +L+S  CQN     
Sbjct: 366 GGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A E+   +LEK  A +++  + L  GL   G  E A KL ++M  RGL+         I 
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485

Query: 552 CAPENGEKESG 562
              + G+ E G
Sbjct: 486 ACCKEGKVEEG 496



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 21/397 (5%)

Query: 142 THSIVLHILTKNRKFKSS-----ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           T + V+H L    +F S+     E +LR    +D   L + L   +  + +  ++  L +
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDG--LLTLLVSGLCQNGKQSEAIELWY 431

Query: 197 DLLFKTYAHRKKFRNA-TDTFCQ-------------MRDYGFLPIIESCNKFLSSLLDSE 242
            LL K +A      NA     C+             M + G +    S N  + +     
Sbjct: 432 RLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEG 491

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +V+      +EM R  I P++YT NM++H  C +G IE A  ++   +  G  P   TY 
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYG 551

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I G+C    +    K    M    I+ N + + TLI  +C+ G + EA R+  +M++ 
Sbjct: 552 IMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            +     TY++LI+G   +G  +    L +EM + G+  +++ Y ALI G CK G+  K 
Sbjct: 612 GIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKV 671

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +++++  N++ PN  TY+ +I G C   N + A +L   M + G  P+   +  L + 
Sbjct: 672 DSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNG 731

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           FC+    + A +V   M    ++ D I  + L  G H
Sbjct: 732 FCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWH 768



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 162/345 (46%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +  LL        K   A + + ++ + GF     + N  +  L ++   + A    KEM
Sbjct: 409 LLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEM 468

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +  +  + N ++ A CK G +E   ++ + M   G  P + TYN L+ G CN G +
Sbjct: 469 LERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKI 528

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A    +  +KNG  P+  T+  +I G+CK  ++ E  ++F EM    +  N V Y TL
Sbjct: 529 EEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTL 588

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I  Y + GN      L ++M   GI     TY++LI GL   G    A  L+ ++ K  L
Sbjct: 589 IRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGL 648

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN   Y+ALI G C      +   + + M  +   PNK  + ++++  C+  +   AA+
Sbjct: 649 SPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAK 708

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +L EM +K + PD++  + L +G    GK E A+K+   M   G+
Sbjct: 709 LLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGI 753



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 149/310 (48%), Gaps = 4/310 (1%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S L  + +   A+  +  +     + N  T N ++H  C+ G  E A ++ K M   G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +    +YNTLI   C +G +    K K  M + GIQP++ T+N L+ G C  GK+ EA 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++ E K     P+  TY  +I+GY +    E G  L++EM+   I+ + + Y  LI   
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C+ G  ++A  L  D+    +   ++TYS+LI G       + A QL   M + G  PN 
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLF 531
             +  L+  +C+     +   +L EM    + P+ I  + + +G  HC  G  + A KL 
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMING--HCKLGNMKAAAKLL 710

Query: 532 RKMEIRGLLP 541
            +M  +G++P
Sbjct: 711 NEMAQKGIVP 720



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 165/385 (42%), Gaps = 35/385 (9%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + + +L       ++F  A     +M D G+ P     N  +        +  AL   
Sbjct: 266 SLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIR 325

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT-------- 303
            +M  N ISPN  T N ++  +CK   +E A  + + M + G + +  T+ +        
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385

Query: 304 ---------------------------LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
                                      L+SG C  G  S A++    + + G   N +T 
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G C+ G   EA ++  EM    +  + ++YNTLI    + G  E G  L EEM+R
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            GI+ D+ TYN L+ GLC  GK ++A  L  +  KN   P+A TY  +I G C     E 
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
             +L++ M+      N  ++  L+  +C+N +   A  +  +M  + +   S   S L  
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIH 625

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL + G  + A +L  +M   GL P
Sbjct: 626 GLSNIGLVDSANQLLDEMRKEGLSP 650



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 135/299 (45%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R D AL F  EM      PN   L +++   C+ G    A+E++  +   GF  +  T N
Sbjct: 387 RFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSN 446

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI G C  G    A K    M + G+  + I++NTLI   CK+GK+ E  ++  EM   
Sbjct: 447 ALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRR 506

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P++ TYN L++G   +G  E    L+ E  +NG   D  TY  +I G CK  + ++ 
Sbjct: 507 GIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEG 566

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L +++    +  NA  Y  LI   C   N   AF+L   M   G       +  L+  
Sbjct: 567 EKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHG 626

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                  D A ++L EM ++ ++P+ +  + L  G    G+      + ++M I  + P
Sbjct: 627 LSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHP 685



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 62/128 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR  G  P +      +       ++       +EM  N + PN  T  ++++  CKLG
Sbjct: 642 EMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLG 701

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A ++   M   G +P   TYN L +G C +G +  A+K  +LM   GI  + IT+ 
Sbjct: 702 NMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYT 761

Query: 338 TLIFGFCK 345
           TLI G+ K
Sbjct: 762 TLIDGWHK 769


>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           hermannioides]
          Length = 417

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 206/403 (51%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++  ++H L  ++    ++S+++ ++        S +F +IL +     S   VF  
Sbjct: 4   TLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSG 63

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   R++      ++C K L  L+  +   +  GFY+E+    
Sbjct: 64  LITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECG 123

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    
Sbjct: 124 YPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGF 183

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G 
Sbjct: 184 RLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGR 243

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y+ ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 244 CKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDK 303

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 304 FTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 363

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML   + PD+   + + +     G      KL ++M+  G  P
Sbjct: 364 MLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 406



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 77  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 132

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 133 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 192

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G IP+  T+ TLI G C  G + LA
Sbjct: 193 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLA 252

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 253 MEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 312

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 313 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPD 372

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 373 TGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 416



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G    A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 57  DIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLKYFKLVWG 114

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 115 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 174

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++                                   P+  
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQ-----------------------------------PDVY 199

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A +L+  M+  G  PN   F  L+   C+N   D A E+   M
Sbjct: 200 TYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRM 259

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 260 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 319

Query: 560 ESG 562
           ++ 
Sbjct: 320 DTA 322


>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
          Length = 418

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMIAEAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++  K +  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L  ++    L P+ 
Sbjct: 252 CKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 8/334 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFD-SILYSYRMCDSSPLVFDL 198
           +I  + LTK  KF+    +   ++  ++    F L    ++ S+ Y Y    +S   F++
Sbjct: 85  AIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGY---PASLYFFNI 141

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L  ++    + R A   F  +  +G  P + S N  ++  +    +D        M+ + 
Sbjct: 142 LMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASG 201

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+VYT +++++  CK   +E A E+F  M + G +P+  T+ TLI GHC  G + LAM
Sbjct: 202 VQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAM 261

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G 
Sbjct: 262 EIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGS 321

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P  
Sbjct: 322 CKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEI 381

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            TY+ +I   C + +     +L K M R G  P+
Sbjct: 382 GTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    +++ A   + EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 109/210 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M + G +P   +    +     + RVD+A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 120/268 (44%)

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           I  +  ++ LI+ +   G L  A++   L +++  +    T   +I    K         
Sbjct: 63  ISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWG 122

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
            + E        ++  +N L++ + + G   +  S+++ + + G++  ++++N L+ G  
Sbjct: 123 FYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G   +   L   +  + + P+  TYS LI G C     E A +L+  M+ +G  PN  
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            F  L+   C+N   D A E+  +ML + ++PD I  + L  GL   G  + A  L  +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKESG 562
            ++GL P        I+ + + G  E+ 
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETA 330


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 214/424 (50%), Gaps = 4/424 (0%)

Query: 122 LSLEFFTWV--QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF 179
           L+L+F  WV  Q    +   ++   I  HIL + R +  +  IL+ +  S      S +F
Sbjct: 52  LALKFLKWVVKQPGLDTDHIVQLFCITTHILVRARMYDPARHILKEL--SLMSGKSSFVF 109

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
            +++ +YR+C+S+P VFD+L + Y      +++ + F  M  YGF P + +CN  L S++
Sbjct: 110 GALMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIV 169

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            S        F KEM + +I P+V T N++++  C  G  +++  + + ME  G+ P++ 
Sbjct: 170 KSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIV 229

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYNT++  +C KG    A++  + M   G+  +V T+N LI   C+  +  +   +  +M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   + PN VTYNTL+NG+   G   +   L  EML  G+  + +T+NALI G   EG  
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           K+A  +   ++   L+    +Y  L+ G C     + A   Y  M R+G    +  +  +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+N   D A  +L EM +  + PD +  S L +G    G+ + A ++  ++   GL
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 540 LPKG 543
            P G
Sbjct: 470 SPNG 473



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 163/351 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   Y  + +F+ A +    M   G    + + N  +  L  S R        ++
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRD 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  I PN  T N +++ F   G +  A ++   M + G  P+  T+N LI GH ++G 
Sbjct: 289 MRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+K  ++ME  G+    +++  L+ G CK  +   A   +  MK   V    +TY  
Sbjct: 349 FKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  +    +  EM ++GI  DI+TY+ALI G C+ G+ K A  +V  + +  
Sbjct: 409 MIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN   YS LI   C     +   ++Y++MI  G  P+   F +L+++ C+      A 
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAE 528

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           E +  M    + P+++    L +G    G+   A  +F +M   G  P  F
Sbjct: 529 EFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFF 579



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 160/349 (45%), Gaps = 1/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +     F+ A   F  M   G +    S    L  L  +   D+A GFY  
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMR 393

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+RN +     T   ++   CK G ++ AV +   M   G  P + TY+ LI+G C  G 
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGR 453

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    + + G+ PN I ++TLI+  C+ G L E  RI+  M     +P+  T+N 
Sbjct: 454 LKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNV 513

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+    + G           M  +GI  + ++++ LI G    G+  KA  +  ++ K  
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVG 573

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P   TY +L+ G C   +   A +  KS+       +  +   L++  C++ + D+A 
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAV 633

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG-LLP 541
            +  EM+++ + PDS   + L SGL   GK  +A+   ++ E RG L+P
Sbjct: 634 SLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVP 682



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/429 (24%), Positives = 182/429 (42%), Gaps = 29/429 (6%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY------------ 186
           T+ T++ VLH   K  +FK++  +L      D  +L     D   Y+             
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELL------DHMNLKGVNADVCTYNMLIHDLCRSNRSA 280

Query: 187 -----------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
                      RM   + + ++ L   +++  K   A     +M  +G  P   + N  +
Sbjct: 281 KGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALI 340

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
              +       AL  +  M    +     +  +++   CK    + A   +  M+  G  
Sbjct: 341 DGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC 400

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
               TY  +I G C  G L  A+   N M K+GI P+++T++ LI GFC+ G+L  A  I
Sbjct: 401 VGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEI 460

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              +    +SPN + Y+TLI    ++G  +    +YE M+  G   D  T+N L+  LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCK 520

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            GK  +A   ++ +  + ++PNA ++  LI G        +AF ++  M + G  P    
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFT 580

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+   C+      A + L  +     A D+++ + L + +   G  + A+ LF +M 
Sbjct: 581 YGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMV 640

Query: 536 IRGLLPKGF 544
            R +LP  F
Sbjct: 641 QRSILPDSF 649



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 154/335 (45%), Gaps = 1/335 (0%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  ++++  S  +D A+  + EM +  I P+ +T   ++   C+ G    A+   K  E
Sbjct: 616 CNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAE 675

Query: 291 SMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G  +P+   Y   + G    G       F+  M+K G+  +V+T N +I G+ + GK+
Sbjct: 676 ARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKI 735

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            + + +  EM   N  PN+ TYN L++GY +  +      LY  M+ +GI  D LT  ++
Sbjct: 736 EKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           ILG+C+    +    ++K      +  +  T++ LI+  C       AF +   M   G 
Sbjct: 796 ILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
             +K+  + ++S   +N  F  +  VL EM ++ ++P+S     L +GL   G  + A  
Sbjct: 856 SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915

Query: 530 LFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           +  +M    + P    +   +    + G+ +   L
Sbjct: 916 VKEEMIAHKICPPNVAESAMVRALAKCGKADEASL 950



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/289 (23%), Positives = 133/289 (46%)

Query: 253  EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            EM      PN+ T N+++H + K   +  +  ++++M   G +P   T  ++I G C   
Sbjct: 744  EMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESN 803

Query: 313  LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +L + +K        G++ +  TFN LI   C  G+++ A  + + M +  +S +  T +
Sbjct: 804  MLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCD 863

Query: 373  TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
             +++   +    +    +  EM + GI  +   Y  L+ GLC+ G  K A  + +++  +
Sbjct: 864  AIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAH 923

Query: 433  SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             + P     SA++        ++ A  L +SM++    P    F  LM  FC+N +   A
Sbjct: 924  KICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEA 983

Query: 493  AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+ + M    +  D +  + L +GL   G   +A +LF +M+  G L 
Sbjct: 984  LELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLA 1032



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 144/342 (42%), Gaps = 4/342 (1%)

Query: 203  YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
            Y+   K     D   +M +    P + + N  L      + V  +   Y+ M  + I P+
Sbjct: 729  YSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPD 788

Query: 263  VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
              T   ++   C+  ++E  +++ K     G      T+N LIS  C  G ++ A    N
Sbjct: 789  KLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVN 848

Query: 323  LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            +M   GI  +  T + ++    +  +  E+  +  EM    +SP    Y  L+NG  +VG
Sbjct: 849  VMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVG 908

Query: 383  NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
            + +    + EEM+ + I    +  +A++  L K GK  +A+ L++ + K  LVP  ++++
Sbjct: 909  DIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFT 968

Query: 443  ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             L+   C   N   A +L   M   G + +   + +L++  C   D   A E+  EM   
Sbjct: 969  TLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRD 1028

Query: 503  CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                +      L  G+   G +     +     ++ LL +GF
Sbjct: 1029 GFLANVTTYKALVGGILSQGTEFSGTDII----LKDLLARGF 1066



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 134/322 (41%), Gaps = 26/322 (8%)

Query: 115  KVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS--------------- 159
            K++K + L  E     Q   P+   L T++I+LH  +K +   +S               
Sbjct: 734  KIEKTHDLLFEMGN--QNQGPN---LTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPD 788

Query: 160  ----ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
                 SI+ GI +S+  ++  K+  + +   R  +     F++L        +   A D 
Sbjct: 789  KLTCYSIILGICESNMLEIGLKILKAFIC--RGVEVDRHTFNMLISKCCANGEINWAFDM 846

Query: 216  FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
               M   G      +C+  +S L  + R   +     EM +  ISP       +++  C+
Sbjct: 847  VNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCR 906

Query: 276  LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            +G I+ A  V + M +    P     + ++      G    A      M K  + P + +
Sbjct: 907  VGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIAS 966

Query: 336  FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            F TL+  FCK G + EA  +   M    +  ++V+YN LI G    G+  +   L+EEM 
Sbjct: 967  FTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMK 1026

Query: 396  RNGIKVDILTYNALILGLCKEG 417
            R+G   ++ TY AL+ G+  +G
Sbjct: 1027 RDGFLANVTTYKALVGGILSQG 1048



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 98/215 (45%), Gaps = 2/215 (0%)

Query: 197  DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
            D +        +F+ +     +M   G  P        L+ L     +  A    +EM  
Sbjct: 863  DAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIA 922

Query: 257  NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            ++I P     + ++ A  K G  + A  + ++M  M  +P++ ++ TL+   C  G ++ 
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTE 982

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A++ + +M   G++ +++++N LI G C KG +  A  +F EMK      NV TY  L+ 
Sbjct: 983  ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVG 1042

Query: 377  GYGQVGNSEMGAS-LYEEMLRNGIKVDILTYNALI 410
            G    G    G   + +++L  G  +  +++N +I
Sbjct: 1043 GILSQGTEFSGTDIILKDLLARGF-ITAMSFNHMI 1076


>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
          Length = 418

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 212/408 (51%), Gaps = 12/408 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L+++  ++H L  ++    ++++++ ++        S +F  IL +     S   VF  L
Sbjct: 13  LQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGL 72

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E      
Sbjct: 73  ITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGY 132

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    +
Sbjct: 133 PASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFR 192

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+ 
Sbjct: 193 LKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHC 252

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  ++   +Y+ ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+  
Sbjct: 253 KNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKI 312

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L EM
Sbjct: 313 TYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372

Query: 500 LEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           L   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 373 LSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYMP 414



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 169/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +   P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+   LM    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 NCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPS 415



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G  P + + +  ++ L    ++D A   + EM  N + PN  T   ++   CK G +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   CK+G     + L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 37/302 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKF 320
           ++Y  + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK 
Sbjct: 65  DIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKL 114

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K              +  L++GF            + E        ++  +N L++ + +
Sbjct: 115 K--------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVK 148

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G   +  S+++ + +  ++  ++++N L+ G  K G   +   L   +  + + P+  T
Sbjct: 149 EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYT 208

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C     + A +L+  M+ +G  PN   F  L+   C+N   D A E+   ML
Sbjct: 209 YSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLML 268

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            + ++PD I  + L  GL   G  + A  L  +M ++GL P        I+   + G+ E
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLE 328

Query: 561 SG 562
           + 
Sbjct: 329 TA 330


>gi|15221081|ref|NP_172636.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200496|sp|Q9SAA6.1|PPR34_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g11710, mitochondrial; Flags: Precursor
 gi|4835786|gb|AAD30252.1|AC007296_13 F25C20.14 [Arabidopsis thaliana]
 gi|22655109|gb|AAM98145.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|30725498|gb|AAP37771.1| At1g11710 [Arabidopsis thaliana]
 gi|332190652|gb|AEE28773.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 657

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/470 (28%), Positives = 230/470 (48%), Gaps = 10/470 (2%)

Query: 72  PEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV- 130
           PEP  +D+ F  +   +L    W  L   S+ LT   +  VL + +    L+LEF+ WV 
Sbjct: 26  PEP--EDILFSALCL-NLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVL 82

Query: 131 --QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL-PSKLFDSILYSYR 187
              T   S    E   +++H+L  +R+F  + SI+  ++  +   L P  +   ++ SY+
Sbjct: 83  RSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQ 142

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
            C SSP VFD L +        + A +   Q R  GF   + + N F+  LL+   +D  
Sbjct: 143 ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              YKEM       NV T N+V+++FCK   +  A+ VF  M   G  P+V ++N +I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262

Query: 308 HCNKGLLSLAMKF---KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
            C  G +  A++      +M  N + PN +T+N++I GFCK G+L  A RI  +M  + V
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N  TY  L++ YG+ G+S+    L +EM   G+ V+ + YN+++  L  EG  + A  
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           +++D++  ++  +  T + ++ G C     + A +  + +       +      LM  F 
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +++    A ++L  ML + ++ D+I    L  G    GK E A++++  M
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/327 (23%), Positives = 151/327 (46%), Gaps = 15/327 (4%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C  R YG   ++++  +  SS       D AL    EM    +  N    N +++     
Sbjct: 324 CNERTYG--ALVDAYGRAGSS-------DEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G IE A+ V ++M S        T   ++ G C  G +  A++F+  + +  +  +++  
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTL+  F +  KL  A++I   M    +S + +++ TLI+GY + G  E    +Y+ M++
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                +++ YN+++ GL K G    A  +V  ++   +V    TY+ L+       N E 
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVEE 550

Query: 457 AFQLYKSMIRSGCRPNKHI--FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           A  +   M +     +  +  F ++++  C+   +++A EVL  M+E+ + PDSI    L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +        E  ++L   + ++G+ P
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTP 637



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/349 (22%), Positives = 149/349 (42%), Gaps = 35/349 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   +   DL  ++   ++ S   C+     +  L   Y        A     +M 
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERT--YGALVDAYGRAGSSDEALRLCDEMT 353

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +      N  +  L     ++ A+   ++M    +  + +T  +V+   C+ G ++
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AVE  + +     +  +  +NTL+        L+ A +    M   G+  + I+F TLI
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL---------- 390
            G+ K+GKL  A  I+  M   N + N+V YN+++NG  + G +    ++          
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV 533

Query: 391 -YEEMLRNGIK----------------------VDILTYNALILGLCKEGKTKKAAYLVK 427
            Y  +L   +K                      V ++T+N +I  LCK G  +KA  ++K
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            + +  +VP++ TY  LIT     ++ E+  +L+  +I  G  P++HI+
Sbjct: 594 FMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 5/276 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + ++ ++ G  P V  +++L+      G    A +        G   +V   N  +    
Sbjct: 137 LIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLL 194

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
              ++    +++ EM +     NV T+N +I  + +        S++  ML+ G+  +++
Sbjct: 195 NVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254

Query: 405 TYNALILGLCKEGKTKKAAYLVKDL---DKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++N +I G CK G  + A  L+  +     N + PNA TY+++I G C     + A ++ 
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++SG   N+  +  L+  + +    D A  +  EM  K +  +++I + +   L   
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           G  E AM + R M  + +    F +   +     NG
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 143/471 (30%), Positives = 228/471 (48%), Gaps = 21/471 (4%)

Query: 80  DFVNIAYSHLIHSD-W-----KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH 133
           DF       ++H+D W     +KL  L+  L P  V  VL+++++D  L+ +FF W  T 
Sbjct: 78  DFDRDWIRKVVHNDLWDDPGLEKLFDLT--LAPIWVPRVLVELKEDPKLAFKFFKWSMTR 135

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYR-M 188
                ++E++ IV HIL   R +  + S+L+ ++    D D FD        +L+S R +
Sbjct: 136 NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFD--------VLWSTRNV 187

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C     VFD LF           A   F +M+ +   P   SCN  L       + D   
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+K+M      P V+T N+++   CK G +E A  +F+ M+  G +P   TYN++I G 
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G L   + F   M+    +P+VIT+N LI  FCK GKL      + EMK   + PNV
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+Y+TL++ + + G  +     Y +M R G+  +  TY +LI   CK G    A  L  +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  +  N  TY+ALI G C  +  + A +L+  M  +G  PN   +  L+  F + ++
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            DRA E+L E+  + + PD ++      GL    K E A  +  +M+  G+
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 166/332 (50%), Gaps = 4/332 (1%)

Query: 214 DTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           DT C   +M+D    P + + N  ++      ++ I L FY+EM+ N + PNV + + ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            AFCK G++++A++ + +M  +G +P+  TY +LI  +C  G LS A +  N M + G++
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            NV+T+  LI G C   ++ EA  +F +M    V PN+ +YN LI+G+ +  N +    L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             E+   GIK D+L Y   I GLC   K + A  ++ ++ +  +  N+  Y+ L+     
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-CMAPDSI 509
             N      L   M           F +L+   C+N+   +A +    +     +  ++ 
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           I + +  GL    + E A  LF +M  +GL+P
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 201/456 (44%), Gaps = 53/456 (11%)

Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDS--------DSFDLPSKLFDSILYS 185
           T+ T++I++  + K    +++  +      RG++          D F    +L D++ + 
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 186 YRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
             M    C+   + ++ L   +    K     + + +M+  G  P + S +  + +    
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG------------------------ 277
             +  A+ FY +MRR  + PN YT   ++ A CK+G                        
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440

Query: 278 -----------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
                       ++ A E+F  M++ G IP++ +YN LI G      +  A++  N ++ 
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI+P+++ + T I+G C   K+  A  + +EMK   +  N + Y TL++ Y + GN   
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALI 445
           G  L +EM    I+V ++T+  LI GLCK     KA  Y  +  +   L  NA+ ++A+I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C     E A  L++ M++ G  P++  +  LM    +  +   A  +  +M E  M 
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D +  + L  GL HC + + A     +M   G+ P
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 2/330 (0%)

Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           + P VF  +++            A   F +M+  G +P   + N  +       R+D  +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM+     P+V T N +++ FCK G +   +E ++ M+  G  P+V +Y+TL+   
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A+KF   M + G+ PN  T+ +LI   CK G L +A R+ +EM    V  NV
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G       +    L+ +M   G+  ++ +YNALI G  K     +A  L+ +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+   Y   I G C  +  E A  +   M   G + N  I+  LM  + ++ +
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                 +L EM E  +    +    L  GL
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-----FDLLFKTYAHRKKFRNATDT 215
           +++ G+ D++      +LF  +       D++ ++     ++ L   +   K    A + 
Sbjct: 442 ALIDGLCDAERMKEAEELFGKM-------DTAGVIPNLASYNALIHGFVKAKNMDRALEL 494

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             +++  G  P +     F+  L   E+++ A     EM+   I  N      +M A+ K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVI 334
            G     + +   M+ +    +V T+  LI G C   L+S A+ + N +  + G+Q N  
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F  +I G CK  ++  A  +F +M    + P+   Y +L++G  + GN     +L ++M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
              G+K+D+L Y +L+ GL    + +KA   ++++    + P+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 99/219 (45%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L       G L EA + FS+MK   V P   + N L++ + ++G ++
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                +++M+  G +  + TYN +I  +CKEG  + A  L +++    LVP+  TY+++I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       +     ++ M    C P+   +  L++ FC+        E   EM    + 
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P+ +  S L       G  + A+K +  M   GL+P  +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 6/147 (4%)

Query: 257 NRIS------PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           NRIS       N      ++   CK   +E A  +F+ M   G +P  T Y +L+ G+  
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G +  A+  ++ M + G++ +++ + +L++G     +L +A     EM    + P+ V 
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRN 397
             +++  + ++G  +    L   ++++
Sbjct: 721 CISVLKKHYELGCIDEAVELQSYLMKH 747


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 206/401 (51%), Gaps = 10/401 (2%)

Query: 146 VLHILTKNRKFKSSES-ILRGILDS--DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKT 202
           ++H+  ++R+   +++ ILR I  S     ++   L  S+  +   C ++ LVFDLL +T
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGN---CGTNNLVFDLLIRT 57

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y   +K R  T+ F  +R  G+L  I +CN  L  L+  + V++A   ++E+ R+ I  N
Sbjct: 58  YVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELN 117

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           VYTLN++++A CK G  +        ME  G    + TYNTLI  +C +GLL  A +  N
Sbjct: 118 VYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMN 177

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   G++P++ T+N +I G CKKG+   A  I  EM    +SP+  TYNTL+    +  
Sbjct: 178 SMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRD 237

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N      ++ EMLR G+  D++++++LI    +     +A    +D+ K  LVP+   Y+
Sbjct: 238 NFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYT 297

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L+ G C   N   A ++   M+  GC  +   +  +++  C+ +    A ++  EM+E+
Sbjct: 298 VLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVER 357

Query: 503 CMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
              PD    + L  G  HC  G    A+ LF  M  R + P
Sbjct: 358 GALPDFYTFTTLIHG--HCQDGNMTKALSLFGTMTQRNIKP 396



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 171/350 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++ +      + ++  A     +M + G  P   + N  L      +    A   +
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM R  + P++ + + ++  F +   +++A+  F++M+  G +P    Y  L+ G+C  
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A+K ++ M + G   +VI +NT++ G CK+  L +A+++F EM      P+  T+
Sbjct: 307 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 366

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            TLI+G+ Q GN     SL+  M +  IK DI+ YN LI G CK G+ +KA+ L   +  
Sbjct: 367 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY  LI   C   +   AF+L+  MI  G +P       ++  +C++ D  +
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 486

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A E L  M+ K +APD I  + L +G       + A     KME  GLLP
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP 536



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 180/383 (46%), Gaps = 39/383 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L      R  F  A + F +M   G +P + S +  ++    +  +D AL ++++M+
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEV------------------------------ 285
           +  + P+     ++MH +C+ G +  A+++                              
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345

Query: 286 -----FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                F  M   G +P   T+ TLI GHC  G ++ A+     M +  I+P+++ +NTLI
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK G++ +A+ ++  M +  + PN +TY  LIN Y  VG+      L++ M+  GIK
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++T N +I G C+ G + KA   +  +    + P+  +Y+ LI G     N ++AF  
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLW 525

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M + G  P+   + ++M+ FC+      A  VL +M+EK + PD    + L +G  H
Sbjct: 526 INKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALING--H 583

Query: 521 CGKDEL--AMKLFRKMEIRGLLP 541
             +D L  A +   +M  RG  P
Sbjct: 584 VTQDNLNEAFRFHDEMLQRGFAP 606



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 151/284 (53%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +       K   +A   F +M + G LP   +    +        +  AL
Sbjct: 324 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 383

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M +  I P++   N ++  FCK+G +E+A E++  M S    P+  TY  LI+ +
Sbjct: 384 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 443

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G +S A +  ++M + GI+P ++T NT+I G+C+ G   +A+     M A  V+P+ 
Sbjct: 444 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 503

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++YNTLING+ +  N +       +M + G+  DI+TYN ++ G C++G+ ++A  +++ 
Sbjct: 504 ISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRK 563

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +  + P+ STY+ALI G   + N   AF+ +  M++ G  P+
Sbjct: 564 MIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 148/316 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   Y        A     +M + G +  + + N  L+ L   + +  A   + E
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+ YT   ++H  C+ G + +A+ +F  M      P +  YNTLI G C  G 
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M    I PN IT+  LI  +C  G + EA R++  M    + P +VT NT
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY + G+S         M+  G+  D ++YN LI G  +E    KA   +  ++K  
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TY+ ++ G C +   + A  + + MI  G  P++  +  L++     ++ + A 
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAF 593

Query: 494 EVLLEMLEKCMAPDSI 509
               EML++  APD +
Sbjct: 594 RFHDEMLQRGFAPDDV 609



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/154 (20%), Positives = 65/154 (42%)

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           L ++ LI    +  K ++     + L     + + +  ++L+ G       E A+++++ 
Sbjct: 49  LVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHRE 108

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           ++RSG   N +   ++++  C++  FD     L EM    +  D +  + L       G 
Sbjct: 109 VVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGL 168

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            E A ++   M  +GL P  F     IN   + G
Sbjct: 169 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKG 202


>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
          Length = 418

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 212/409 (51%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F  JL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +   +++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +   G  PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+QP+V T++ LI G CK+ K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G   +   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E A    K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++    KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CKKGDVWTGSKLLKEMQRDGYVP 414



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 170/335 (50%), Gaps = 10/335 (2%)

Query: 144 SIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LTK  KF+    +   +L  ++    F L    ++  L     C   +S   F+
Sbjct: 85  AIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL----ECGYPASLYFFN 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  ++    + R A   F  +  +G  P + S N  ++  +    +D        M+ +
Sbjct: 141 ILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQAS 200

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   +E A E+F+ M   G +P+  T+ TLI GHC  G + LA
Sbjct: 201 GVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLA 260

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +TY TLI+G
Sbjct: 261 MEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDG 320

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P 
Sbjct: 321 SCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             TY+ +I   C + +     +L K M R G  P+
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPS 415



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + +  ++ L    +++ A   ++EM  N + PN  T   ++   CK G 
Sbjct: 197 MQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGR 256

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ T
Sbjct: 257 VXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G
Sbjct: 317 LIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +K +I TY  +I   CK+G     + L+K++ ++  VP+  T
Sbjct: 377 LKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 107/210 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M D G +P   +    +     + RV +A+  YK+M 
Sbjct: 209 YSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQML 268

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 269 SQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLE 328

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A  ++  M K  I+ + + +  LI G C++G+  +A ++  EM +  + P + TY  +I
Sbjct: 329 TAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMII 388

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           N + + G+   G+ L +EM R+G    ++T
Sbjct: 389 NEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/359 (21%), Positives = 153/359 (42%), Gaps = 42/359 (11%)

Query: 209 FRNATDTFCQMRDY----GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           FR+   ++C M  +      +P  ++  + + S               E +  +IS ++Y
Sbjct: 9   FRHTLQSYCTMIHFLCTHQMIPEAKTLIQIVVSRKGKGSASAVFAXJLETKGTQIS-DIY 67

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
             + ++ A+ + G +  A+E ++  +   F +P  T         C K L  L MK K  
Sbjct: 68  VFSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDT---------CRKVLEHL-MKLK-- 115

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
                       +  L++GF            + E        ++  +N L++ + + G 
Sbjct: 116 ------------YFKLVWGF------------YEESLECGYPASLYFFNILMHSFVKEGE 151

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
             +  S+++ + + G++  ++++N L+ G  K G   +   L   +  + + P+  TYS 
Sbjct: 152 IRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSV 211

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C     E A +L++ M+ +G  PN   F  L+   C+N     A E+  +ML + 
Sbjct: 212 LINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQS 271

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           ++PD I  + L  GL   G  + A  L  +M ++GL P        I+ + + G+ E+ 
Sbjct: 272 LSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 190/351 (54%), Gaps = 3/351 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + +V+  L   +A   +   +     +MR+ G LP +   N  +     ++R++ A  + 
Sbjct: 450 NAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYL 509

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM   R+ PN +T    +  + K G +E A   F  M S G +P+V  Y  LI GHC +
Sbjct: 510 MEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE 569

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G ++ A   F+ ++ +  +Q +V T++ LI G  + GK+HEA  IFSE++   + PN  T
Sbjct: 570 GNVTEAFSVFRFILSRRVLQ-DVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFT 628

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+LI+G  + GN +  + L EEM   GI  DI+TYN LI GLCK G+ ++A  L  D++
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L PN  TY+A++ G C  KN   AFQL + M+  G  P+  I+ ++++  C+ E F+
Sbjct: 689 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 748

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A ++  EMLEK  A  ++  + L  G    GK + A  L  +M  +  +P
Sbjct: 749 KALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIP 798



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/546 (26%), Positives = 246/546 (45%), Gaps = 71/546 (13%)

Query: 63  PIPIPHRTLPEPKGQDL----DFVNIAYSHLIHSDWKKL---TALSTHLTPFRVKHVLLK 115
           P PI H+       Q L    D V    + L   +W+ L   + +   L    ++ V+L+
Sbjct: 13  PRPISHKAASFSSSQALTQNEDSVREITTLLNSHNWQALMESSDIPKKLNTDIIRSVILQ 72

Query: 116 VQ-KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN----RKFKSSESILRGIL-DS 169
            Q  D    L FF W Q HK  + T +    VL  L  N      +  +  +++ I+ +S
Sbjct: 73  NQVGDPKRLLNFFYWSQ-HKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNS 131

Query: 170 DSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           DS   P  +  SI+  YR C+ SP  ++FD+L  +Y        A + F   +++ F P 
Sbjct: 132 DS---PLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPS 188

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG---------- 277
           + SCN  L  LL   +V++    +  M  +++ P+VYT   ++ A CK+G          
Sbjct: 189 LLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLL 248

Query: 278 -------IIERAVEVFKNMESMGFIPSVTTYNTLISGHC--------------------- 309
                  +++ A+E+ ++M   G +P + TY+ LI+G C                     
Sbjct: 249 EMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 308

Query: 310 --------------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
                          +G +  A + K+ M   GI+ N+I +NTL+ G CK GK+ +A  I
Sbjct: 309 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 368

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EM    V P+  TY+ LI G+ +  N      L +EM +  +   +LTY+ +I GLC+
Sbjct: 369 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCR 428

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G  +    +++++  N L PNA  Y+ L+T        E +  + + M   G  P+   
Sbjct: 429 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 488

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+  FC+ +  + A   L+EMLE+ + P++        G    G+ E+A + F +M 
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548

Query: 536 IRGLLP 541
             G+LP
Sbjct: 549 SCGVLP 554



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 173/368 (47%), Gaps = 2/368 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +D+L   +   K+ R A     +M D G  P   + N  +   +    ++ A     EM 
Sbjct: 279 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 338

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I  N+   N +++  CK G +E+A+E+ + M   G  P   TY+ LI GHC    ++
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 398

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M+K  + P V+T++ +I G C+ G L   N I  EM    + PN V Y TL+
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             + + G  E    + E M   GI  D+  YN+LI+G CK  + ++A   + ++ +  L 
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PNA TY A I G       E A + +  M+  G  PN  I+  L+   C+  +   A  V
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF--DKLRTINCA 553
              +L + +  D    S L  GL   GK   A  +F +++ +GLLP  F  + L + +C 
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCK 638

Query: 554 PENGEKES 561
             N +K S
Sbjct: 639 QGNVDKAS 646



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 170/352 (48%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ ++++ L        K   A +   +M + G  P  ++ +  +      + +  A  
Sbjct: 343 EANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFE 402

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM++ +++P V T +++++  C+ G ++    + + M   G  P+   Y TL++ H 
Sbjct: 403 LLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA 462

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +  +      M + GI P+V  +N+LI GFCK  ++ EA     EM    + PN  
Sbjct: 463 KEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAH 522

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY   I+GY + G  E+    + EML  G+  ++  Y ALI G CKEG   +A  + + +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               ++ +  TYS LI G         AF ++  +   G  PN   +  L+S  C+  + 
Sbjct: 583 LSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNV 642

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+A+++L EM  K + PD +  + L  GL   G+ E A  LF  +E RGL P
Sbjct: 643 DKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 163/377 (43%), Gaps = 35/377 (9%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y+   +   A   F +M   G LP +      +        V  A   ++ +   R+  +
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T ++++H   + G +  A  +F  ++  G +P+  TYN+LISG C +G +  A +   
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI P+++T+N LI G CK G++  A  +F +++   ++PN VTY  +++GY +  
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNA---------------------------------- 408
           N      L EEML  G+  D   YN                                   
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNT 770

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G CK GK ++A +L++++ +   +PN  TY++LI   C       A +L+  M    
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P    +  L+  +    +    + +  EM+ K + PD +    +       G    A 
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890

Query: 529 KLFRKMEIRGL-LPKGF 544
           KL  ++ ++G+ +  GF
Sbjct: 891 KLKDEILVKGMPMKSGF 907



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 151/309 (48%), Gaps = 1/309 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L    +   K   A   F ++++ G LP   + N  +S       VD A    +EM 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I+P++ T N+++   CK G IERA  +F ++E  G  P+  TY  ++ G+C     +
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M   G+ P+   +N ++   CK+ K  +A  +F EM     + + V++NTLI
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLI 772

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY + G  +    L EEM+      + +TY +LI   CK G   +A  L  ++ + +++
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P A TY++L+ G     N      L++ M+  G  P+K  + +++  +C+  +   A ++
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892

Query: 496 LLEMLEKCM 504
             E+L K M
Sbjct: 893 KDEILVKGM 901



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 166/358 (46%), Gaps = 28/358 (7%)

Query: 140 LETHSIVLHILTKNRKFKSS-------------------ESILRGILDSDSFDLPSKLFD 180
           ++T+S+++H L++N K   +                    S++ G     + D  S+L +
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            +    +  +   + +++L        +   A + F  +   G  P   +    +     
Sbjct: 651 EM--CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCK 708

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           S+    A    +EM    + P+ +  N++++  CK    E+A+++F+ M   GF  +V+ 
Sbjct: 709 SKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVS- 767

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           +NTLI G+C  G L  A      M +    PN +T+ +LI   CK G + EA R++ EM+
Sbjct: 768 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 827

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
             NV P   TY +L++GY  +GN    ++L+EEM+  GI+ D +TY  +I   C+EG   
Sbjct: 828 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 887

Query: 421 KAA-----YLVKDLD-KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +A       LVK +  K+       T S +  G  +  N + A ++ +SM++ G   N
Sbjct: 888 EACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSN 945


>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 582

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 123/420 (29%), Positives = 220/420 (52%), Gaps = 1/420 (0%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           LS  F++W  +      +L++   ++ ILTK+  FK++  +L  +   +    P  L   
Sbjct: 62  LSWSFYSWTDSLPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSL 121

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +       +    VF  L   YA      ++   F Q+   G  P +++C   L+SL+  
Sbjct: 122 VGGVSEDPEVLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKE 181

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
              D     +K+M +  +  N++  N+++HA  K G  E+A ++   ME  G  P + TY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTY 241

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NTLIS +C K +   A+  ++ ME++G+ P+++T+N+LI GF ++G++ EA R+F ++K 
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKG 301

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V  N VTY TLI+GY ++ + +    L E M   G    ++TYN+++  LC++G+ ++
Sbjct: 302 V-VMANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIRE 360

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L+ ++    + P+  T + LI   C  ++   A ++ K MI SG + + + ++ L+ 
Sbjct: 361 ANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            FC+  + D A E L  M+EK ++P     S L  G ++  K +   KL  + E RGL P
Sbjct: 421 GFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCP 480



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 169/346 (48%), Gaps = 1/346 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+++L    +       A     +M + G  P I + N  +S          AL     M
Sbjct: 205 VYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R+ ++P++ T N ++H F + G +  A  +F+ ++ +  + +  TY TLI G+C    +
Sbjct: 265 ERSGVAPDIVTYNSLIHGFSREGRMREATRLFRKIKGV-VMANHVTYTTLIDGYCRMNDI 323

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++ + +ME  G  P V+T+N+++   C+ G++ EANR+ +EM    + P+ +T NTL
Sbjct: 324 DEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTL 383

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           IN Y ++ +      + ++M+ +G+K+D+ +Y ALI G CK  +   A   +  + +  L
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGL 443

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P  S YS L+ G   +   +   +L +   + G  P+  ++  L+   C+ E  D A  
Sbjct: 444 SPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKV 503

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +   M +K +  DS+I + +       GK   A  LF  M  R L+
Sbjct: 504 LFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVMYNRRLM 549



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 17/283 (6%)

Query: 179 FDSILYSY----RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY------------ 222
           ++S+++ +    RM +++ L   +     A+   +    D +C+M D             
Sbjct: 276 YNSLIHGFSREGRMREATRLFRKIKGVVMANHVTYTTLIDGYCRMNDIDEALRLREVMES 335

Query: 223 -GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GF P + + N  L  L +  R+  A     EM   +I P+  T N +++A+CK+  +  
Sbjct: 336 RGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVS 395

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV+V K M   G    + +Y  LI G C    L  A +    M + G+ P    ++ L+ 
Sbjct: 396 AVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVD 455

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF  + K  E  ++  E +   + P+V  Y  LI    ++   +    L+E M + G+  
Sbjct: 456 GFYNQNKQDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMG 515

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           D + Y  +     + GK   A+ L   +    L+ N   Y +L
Sbjct: 516 DSVIYTTMAYAYWRTGKVTDASALFDVMYNRRLMVNLKLYKSL 558



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/221 (18%), Positives = 88/221 (39%), Gaps = 35/221 (15%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + +      + R A     +M      P   +CN  +++    E +  A+   K+
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN--- 310
           M  + +  ++Y+   ++H FCK+  ++ A E   +M   G  P  + Y+ L+ G  N   
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNK 462

Query: 311 -----------------------KGLLSLAMKFKNL---------MEKNGIQPNVITFNT 338
                                  +GL+    K + +         MEK G+  + + + T
Sbjct: 463 QDEITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTT 522

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           + + + + GK+ +A+ +F  M    +  N+  Y +L   Y 
Sbjct: 523 MAYAYWRTGKVTDASALFDVMYNRRLMVNLKLYKSLSASYA 563


>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           javanica]
          Length = 431

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 213/424 (50%), Gaps = 14/424 (3%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++ F  ++S+++ ++        S +F +IL
Sbjct: 3   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAAIL 62

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +     S   VF  L   Y      R+A + +   R++      ++C K L  L+    
Sbjct: 63  ETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRY 122

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  P V +YNT
Sbjct: 123 FKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNT 182

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L    + K+ M  +G+QP+V T++ LI G  K+  + + N +F EM    
Sbjct: 183 LMNGYIRLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKG 242

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D +TYN L  GLCK+G   +A 
Sbjct: 243 LVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAH 302

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L P+  TY+ LI G C   + + AF+  K MI+     +   +  L+S  
Sbjct: 303 GLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGL 362

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIR 537
           CQ      A ++L EML   + PD    ++I++E       C K ++    K  ++M+  
Sbjct: 363 CQEGRSXDAEKMLREMLSVGLKPDXGTYTMIINEF------CKKGDVWKGXKXLKEMQRN 416

Query: 538 GLLP 541
           G +P
Sbjct: 417 GHVP 420



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 168/344 (48%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 91  AIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYEEIL----ECGYPASLYFFN 146

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 147 ILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRLKSAMXAS 206

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++   K   ++   E+F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 207 GVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCKNGRVDLA 266

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P+ IT+NTL +G CKKG L++A+ +  EM    + P+  TY TLI+G
Sbjct: 267 MEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDG 326

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I +D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 327 CCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPD 386

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ +I   C + +  +  +  K M R+G  P    + +LM+
Sbjct: 387 XGTYTMIINEFCKKGDVWKGXKXLKEMQRNGHVPXVVTYNVLMN 430



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/265 (21%), Positives = 115/265 (43%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  ++ LI+ +   G L  A++   L  ++ +     T   ++    K          + 
Sbjct: 72  IYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLRYFKLVWGFYE 131

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E+       ++  +N L++ + + G+  +  S+++ + + G++  + +YN L+ G  + G
Sbjct: 132 EILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLG 191

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +   L   +  + + P+  TYS LI G       +   +L+  M+  G  PN   F 
Sbjct: 192 XLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFT 251

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N   D A E+  +ML + + PD I  + L  GL   G    A  L  +M ++
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMK 311

Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
           GL P  F     I+   + G+ ++ 
Sbjct: 312 GLKPDKFTYTTLIDGCCKEGDLDAA 336


>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
          Length = 418

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/409 (29%), Positives = 214/409 (52%), Gaps = 12/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL+++  ++H L  ++    ++++++ ++        S +F +IL +     S   VF  
Sbjct: 12  TLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSG 71

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y      R+A + +  ++++ F    ++C K L  L+  +   +  GFY+E     
Sbjct: 72  LITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECG 131

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              ++Y  N++MH+F K G I  A  VF  +      PSV ++NTL++G+   G L    
Sbjct: 132 YPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGF 191

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           + KN M+ +G+Q +V T++ LI G CK  K+ +AN +F EM    + PN VT+ TLI+G+
Sbjct: 192 RLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGH 251

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+ 
Sbjct: 252 CKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDK 311

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C   + E AF+  K MI+   R +   +  L+S  CQ      A ++L E
Sbjct: 312 ITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRE 371

Query: 499 MLEKCMAPD----SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ML   + P+    ++I++E       C K ++   +KL ++M+  G +P
Sbjct: 372 MLSVGLKPEIGTYTMIINEF------CEKGDVWTGLKLLKEMQRDGYMP 414



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 146/282 (51%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S   F++L  ++    + R A   F  +  +   P + S N  ++  +    +D     
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M+ + +  +VYT +++++  CK   ++ A E+F  M   G +P+  T+ TLI GHC 
Sbjct: 194 KNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              + +AM+    M    + P++IT+NTLI+G CKKG L +A  +  EM    + P+ +T
Sbjct: 254 NRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+G  + G+ E      + M++  I++D + Y ALI GLC+EG++  A  +++++ 
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              L P   TY+ +I   C + +     +L K M R G  P+
Sbjct: 374 SVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPS 415



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 153/341 (44%), Gaps = 26/341 (7%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL------TLETHSIVLHILTKNRKFKSSE 160
           FRV     +   ++++ L++F  V      SL      +L   +I++H   K  + + ++
Sbjct: 97  FRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQ 156

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+                FD+I  +S R    S + F+ L   Y               M
Sbjct: 157 SV----------------FDAITKWSLR---PSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  G    + + +  ++ L  + ++D A   + EM  N + PN  T   ++   CK   +
Sbjct: 198 QASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRV 257

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+E++K M S    P + TYNTLI G C KG L  A    + M   G++P+ IT+ TL
Sbjct: 258 DVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+
Sbjct: 318 IDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 377

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           K +I TY  +I   C++G       L+K++ ++  +P+  T
Sbjct: 378 KPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 197/366 (53%), Gaps = 4/366 (1%)

Query: 180 DSILYSYRMCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           D++   YRM   +P    + F     ++A +K++        QM  +     + S N  +
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     VD ++    +M +  I P+  T N +++  C  G I+ AVE+F  M   G  
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHE 195

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V +Y T+I+G C  G  S+A+     ME+NG +PNV+T++T+I   CK   +++A   
Sbjct: 196 PNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEF 255

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            SEM    + PNV TYN++++G+  +G       L++EM+   +  + +T+  L+ GLCK
Sbjct: 256 LSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCK 315

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EG   +A  + + + +  + P+ STY+AL+ G C+++    A ++++ MIR GC P  H 
Sbjct: 316 EGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHS 375

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +L++ +C++   D A  +L EM  K + PD++  S L  GL   G+ + A+ LF++M 
Sbjct: 376 YNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMC 435

Query: 536 IRGLLP 541
             G  P
Sbjct: 436 SYGPHP 441



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 176/359 (49%), Gaps = 35/359 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   + N  ++ L +  ++  A+  + EM +    PNV +   V++  CK G
Sbjct: 153 KMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTG 212

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
               AV+VFK ME  G  P+V TY+T+I   C   L++ AM+F + M + GI PNV T+N
Sbjct: 213 NTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYN 272

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +++ GFC  G+L+EA R+F EM   +V PN VT+  L++G  + G       ++E M   
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEK 332

Query: 398 GIKVDILTYNA-----------------------------------LILGLCKEGKTKKA 422
           G++ DI TYNA                                   LI G CK  +  +A
Sbjct: 333 GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEA 392

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+ ++   +L P+  TYS L+ G C     + A  L+K M   G  PN   + +L+  
Sbjct: 393 KSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDG 452

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           FC++   D A ++L  M EK + P+ +  + L  G+   GK E+A +LF K+   G  P
Sbjct: 453 FCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRP 511



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 163/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D F +M   G  P + + +  + SL     V+ A+ F  EM    I PNV+T N ++H
Sbjct: 217 AVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVH 276

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC LG +  A  +FK M     +P+  T+  L+ G C +G++S A      M + G++P
Sbjct: 277 GFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEP 336

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           ++ T+N L+ G+C +  ++EA ++F  M     +P   +YN LINGY +    +   SL 
Sbjct: 337 DISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLL 396

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM    +  D +TY+ L+ GLC+ G+ K+A  L K++      PN  TY  L+ G C  
Sbjct: 397 AEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKH 456

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + + A +L KSM      PN   + +L+         + A E+  ++      PD    
Sbjct: 457 GHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTY 516

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  GL   G  + A  LFRKME  G LP
Sbjct: 517 TVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 546



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 4/312 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           + F+S+  ++  VD AL  +  M R    P+V      + +F K       V +   M+ 
Sbjct: 62  DGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL 121

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
                +V + N LI+  C    +  ++     M K GI P+ ITFN LI G C +GK+ E
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F+EM      PNV++Y T+ING  + GN+ M   ++++M +NG K +++TY+ +I 
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LCK+     A   + ++ +  + PN  TY++++ G C       A +L+K M+     P
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMK 529
           N   F +L+   C+      A  V   M EK + PD    + L  G  +C +  +  A K
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDG--YCLQRLMNEAKK 359

Query: 530 LFRKMEIRGLLP 541
           +F  M  +G  P
Sbjct: 360 VFEIMIRKGCAP 371



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 152/327 (46%), Gaps = 2/327 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G  +    +  ++LF  ++    M ++  + F +L            A   F  M 
Sbjct: 273 SIVHGFCNLGQLNEATRLFKEMVGRDVMPNT--VTFTILVDGLCKEGMVSEARLVFETMT 330

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +        ++ A   ++ M R   +P  ++ N++++ +CK   ++
Sbjct: 331 EKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMD 390

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M      P   TY+TL+ G C  G    A+     M   G  PN++T+  L+
Sbjct: 391 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILL 450

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK G L EA ++   MK   + PN+V Y  LI G    G  E+   L+ ++  +G +
Sbjct: 451 DGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTR 510

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI TY  +I GL KEG + +A  L + ++ +  +PN+ +Y+ +I G    ++S  A +L
Sbjct: 511 PDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRL 570

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE 487
              M+      N   F+ML+    Q+E
Sbjct: 571 IDEMVGKRFSVNLSTFQMLLDLESQDE 597



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 145/309 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             ++ +   + +  +   AT  F +M     +P   +    +  L     V  A   ++ 
Sbjct: 269 FTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P++ T N +M  +C   ++  A +VF+ M   G  P   +YN LI+G+C    
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M    + P+ +T++TL+ G C+ G+  EA  +F EM +    PN+VTY  
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+ + G+ +    L + M    ++ +I+ Y  LI G+   GK + A  L   L  + 
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ +I G      S+ A+ L++ M   G  PN   + +++  F QN+D   A 
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568

Query: 494 EVLLEMLEK 502
            ++ EM+ K
Sbjct: 569 RLIDEMVGK 577


>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           urticoides]
          Length = 412

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/400 (30%), Positives = 204/400 (51%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++  ++H L  ++    ++S++  ++        S +F ++L +     S   VF  L  
Sbjct: 2   SYCTMIHFLCTHQXLSEAKSLIEVVVSRKGKGSASAVFAAVLETXGNQRSDIYVFSGLIT 61

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      R+A + +   R++      ++C K L  L+  +   +  GFY+E+       
Sbjct: 62  AYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA 121

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL++G+   G L    + K
Sbjct: 122 SLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLK 181

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M  +G+QP+V T++ LI G CK+ K+  AN +F EM    + PN VT+ TLI+G+ + 
Sbjct: 182 SAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKN 241

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L+ ++    L P+  TY
Sbjct: 242 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTY 301

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C   + + AF+  K MI+   R +   +  L+S  CQ      A ++L EML 
Sbjct: 302 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 361

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + PD+   + + +     G      KL ++M+  G  P
Sbjct: 362 VGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAP 401



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 172/344 (50%), Gaps = 10/344 (2%)

Query: 144 SIVLHILTKNRK----FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFD 197
           +I  + LT+  K    F +   +L  ++    F L    ++ IL     C   +S   F+
Sbjct: 72  AIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFN 127

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   +      R A   F  +  +G  P + S N  ++  +    +D        M  +
Sbjct: 128 ILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLAS 187

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+VYT +++++  CK   ++ A  +F  M   G +P+  T+ TLI GHC  G + LA
Sbjct: 188 GVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLA 247

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G
Sbjct: 248 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDG 307

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L P+
Sbjct: 308 CCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 367

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             TY+ ++   C + +  +  +L K M R G  P+   + +LM+
Sbjct: 368 TGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMN 411



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/303 (25%), Positives = 130/303 (42%), Gaps = 39/303 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G +  A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 52  DIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLKYFKLVWG 109

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++                                   P+  
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQ-----------------------------------PDVY 194

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G C     + A  L+  M+  G  PN   F  L+   C+N   D A E+  +M
Sbjct: 195 TYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQM 254

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           L + + PD I  + L  GL   G  + A  L  +M ++GL P  F     I+   + G+ 
Sbjct: 255 LSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDL 314

Query: 560 ESG 562
           ++ 
Sbjct: 315 DTA 317



 Score = 88.2 bits (217), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 35/217 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A   F +M   G +P   +    +     + RVD+A+  YK+M 
Sbjct: 196 YSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 255

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++   M   G  P   TY TLI G C +G L 
Sbjct: 256 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLD 315

Query: 316 LAMKF-KNLMEKN----------------------------------GIQPNVITFNTLI 340
            A +  K ++++N                                  G++P+  T+  ++
Sbjct: 316 TAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIV 375

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             FCKKG + + +++  EM+    +P+VVTYN L+NG
Sbjct: 376 NEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/409 (30%), Positives = 205/409 (50%), Gaps = 6/409 (1%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL 194
           P S  +E   + L  +   R   +   ILR I  S    +  ++ +S++     C    L
Sbjct: 59  PDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRV--EIVESLISMSSTCGVDNL 116

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VFDLL ++Y   +K    TDTF  +R  GFL  I +CN  L  L+    VD+A   Y E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R+ I  NVYTLN++++A CK   I+       +ME  G    + TYNTLI+ +C +GLL
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLL 236

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  N M   G++P + T+N +I G CKKG+   A  +F+EM +  +SP+  TYNTL
Sbjct: 237 GEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTL 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +    +  N      ++ +ML  G+  D++++++LI    + G   +A    +D+  + L
Sbjct: 297 LVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGL 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP+   Y+ LI G C       A ++   M+  GC  +   +  +++  C+ +    A  
Sbjct: 357 VPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANA 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           +  EM+E+ + PD    + L  G  HC +  +  A+ LF  M  + + P
Sbjct: 417 LFDEMVERGVVPDFCTFTTLIHG--HCKEGNMGKALSLFGIMTQKNIKP 463



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 184/356 (51%), Gaps = 20/356 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLP--------IIESC--NKFLSSLLDSERVD 245
           ++ +      + ++  A   F +M   G  P        ++ESC  N FL      E  D
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFL------EAKD 311

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           I    + +M    +SP++ + + ++    + G +++A+  F++M++ G +P    Y  LI
Sbjct: 312 I----FSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILI 367

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G+C  G++S A++ ++ M + G   +V+ +NT++ G CKK  L +AN +F EM    V 
Sbjct: 368 NGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVV 427

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+  T+ TLI+G+ + GN     SL+  M +  IK DI+TYN LI G CK  + +KA  L
Sbjct: 428 PDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANEL 487

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++    + PN  +Y+ L+ G C       AF+L+  MIR G +P       ++  +C+
Sbjct: 488 WNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCR 547

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + D  +A E L +M+ + + PDSI  + L +G       + A  L  KME +GL P
Sbjct: 548 SGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQP 603



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 183/383 (47%), Gaps = 39/383 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L         F  A D F  M   G  P + S +  +     +  +D AL ++++M+
Sbjct: 293 YNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMK 352

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEV------------------------------ 285
            + + P+     ++++ +C+ G++  A+E+                              
Sbjct: 353 TSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLA 412

Query: 286 -----FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                F  M   G +P   T+ TLI GHC +G +  A+    +M +  I+P+++T+N LI
Sbjct: 413 DANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILI 472

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK  ++ +AN +++EM +  + PN ++Y  L+NGY  +G       L++EM+R GIK
Sbjct: 473 DGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIK 532

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++T N +I G C+ G   KA   +  +    + P++ TY+ LI G    +  ++AF L
Sbjct: 533 PTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFL 592

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M   G +P+   + ++++ FC+      A  +L +M+E+ + PD    + L +G  +
Sbjct: 593 INKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLING--Y 650

Query: 521 CGKDEL--AMKLFRKMEIRGLLP 541
             +D L  A +   +M  RG +P
Sbjct: 651 VSQDNLKEAFRFHDEMLQRGFVP 673



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 153/284 (53%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +      +K   +A   F +M + G +P   +    +        +  AL
Sbjct: 391 CALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKAL 450

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M +  I P++ T N+++  FCK   +E+A E++  M S    P+  +Y  L++G+
Sbjct: 451 SLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGY 510

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN G +S A +  + M + GI+P ++T NT+I G+C+ G L +A+    +M +  V P+ 
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLING+ +    +    L  +M   G++ D++TYN ++ G C++G+ ++A  +++ 
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +  + P+ STY+ LI G   + N + AF+ +  M++ G  P+
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 152/335 (45%), Gaps = 5/335 (1%)

Query: 179 FDSILYSYRMCDSSPLVFD-----LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
            D  L  +R   +S LV D     +L   Y        A +   +M + G    + + N 
Sbjct: 341 LDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNT 400

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L+ L   + +  A   + EM    + P+  T   ++H  CK G + +A+ +F  M    
Sbjct: 401 ILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKN 460

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P + TYN LI G C    +  A +  N M    I PN I++  L+ G+C  G + EA 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           R++ EM    + P +VT NT+I GY + G+         +M+  G+  D +TYN LI G 
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGF 580

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            K     KA +L+  ++   L P+  TY+ ++ G C +   + A  + + MI  G  P++
Sbjct: 581 VKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDR 640

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
             +  L++ +   ++   A     EML++   PD 
Sbjct: 641 STYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 129/293 (44%), Gaps = 35/293 (11%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             ++++ ++ +   +    + FK +   GF+ S+   N+L+ G    G + LA +  N +
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            ++GI+ NV T N ++   CK  K+ +            V P ++               
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDD------------VKPFLI--------------- 209

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                   +M + GI  DI+TYN LI   C+EG   +A  ++  +    L P   TY+A+
Sbjct: 210 --------DMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C +    RA  ++  M+  G  P+   +  L+   C+N +F  A ++  +ML + +
Sbjct: 262 INGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +PD I  S L       G  + A+  FR M+  GL+P        IN    NG
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374


>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 632

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 233/478 (48%), Gaps = 17/478 (3%)

Query: 52  VSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPF---- 107
           + E+  K+  NP+   +  LP+ +    + V +  SHL  ++  +L  L +H+       
Sbjct: 42  IPESEAKLIVNPL---YHFLPQNQNP-FNIVELVSSHL-KTNNPRLALLQSHIKELIPHL 96

Query: 108 ---RVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILR 164
              ++  +LL+ Q ++V +L FF WV+      L+   + +++HIL  +R+F  +   L 
Sbjct: 97  GHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLS 156

Query: 165 GILD-SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
            +++ S        +F +++     C+ +P++F++L K Y        +  +F +M   G
Sbjct: 157 ELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG 216

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F+P + +CN  L+ L   +        Y+EM R  +  N YT N++ +  C+ G + +  
Sbjct: 217 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 276

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
              + ME  GF P V TYNTLI  +  +G L  A     +M + G+ P+++++ +L+ G 
Sbjct: 277 GFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGL 336

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ G++ EA+++F  M    + P+VV YNTLI  Y + G  +   SL  EM+  GI  D 
Sbjct: 337 CRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDS 396

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            T   L+ G  +EG+   A  LV ++ K  +      Y  LI   C       A  L + 
Sbjct: 397 FTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLER 456

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           ++    +P+  I+  L+ +FC++ +   A  + LEM+ +   P     ++ Y  L HC
Sbjct: 457 ILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPT----TDTYKSLIHC 510



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 141/324 (43%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P + + N  + S +   R++ A   YK M R  + P++ +   +M   C+LG
Sbjct: 281 KMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLG 340

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A ++F  M   G  P V  YNTLI  +C  G+L  A    + M   GI P+  T  
Sbjct: 341 RVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCR 400

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G+ ++G+L  A  +  E++   V+     Y  LI    +        SL E +L +
Sbjct: 401 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED 460

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             + D   YN LI   C+     +A  L  ++   +  P   TY +LI   C    S   
Sbjct: 461 SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDG 520

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M+ S   P+  I   L++ +C+  + D+A  +L+   +     DS   + L   
Sbjct: 521 EGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKV 580

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G +   M+L  +M   G LP
Sbjct: 581 YRDVGNETKLMELQDRMLKAGFLP 604



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N + F  LI  + K   +HE+   F +M      PNV+  N ++NG  ++ +      LY
Sbjct: 185 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 244

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM R G+  +  T+N L   LC++G   K    ++ +++    P+  TY+ LI     R
Sbjct: 245 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 304

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E AF LYK M R G  P+   +  LM   C+      A ++   M+++ M PD ++ 
Sbjct: 305 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 364

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L       G  + A  L  +M   G+ P  F
Sbjct: 365 NTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSF 397



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 35/278 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N     M++ A+ KL +I  +   FK M  +GF+P+V   N +++G       +   +  
Sbjct: 185 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 244

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G+  N  TFN L +  C+ G +++                       ING+   
Sbjct: 245 EEMGRIGVHSNAYTFNILTYVLCRDGDVNK-----------------------INGF--- 278

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
                     E+M   G   D++TYN LI    + G+ + A YL K + +  ++P+  +Y
Sbjct: 279 ---------LEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSY 329

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++L+ G C       A QL+  MI  G  P+  ++  L+  +C++     A  +L EM+ 
Sbjct: 330 TSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIG 389

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + PDS     L  G    G+   A+ L  +++  G+
Sbjct: 390 IGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGV 427



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 131/318 (41%), Gaps = 35/318 (11%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + ++ L  +Y  R +  +A   +  M   G +P + S    +  L    RV  A  
Sbjct: 288 DPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQ 347

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    + P+V   N ++ A+CK G+++ A  +   M  +G  P   T   L+ G+ 
Sbjct: 348 LFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYG 407

Query: 310 NKGLLSLAMKF--------------------------------KNLMEK---NGIQPNVI 334
            +G L  A+                                  K+L+E+   +  QP+  
Sbjct: 408 REGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSD 467

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI  FC+   + EA  +  EM   N  P   TY +LI+   ++  S  G  L  EM
Sbjct: 468 IYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEM 527

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + + +  D     AL+ G CKEG   KA  L+    K+    ++ ++++L+       N 
Sbjct: 528 VESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLVKVYRDVGNE 587

Query: 455 ERAFQLYKSMIRSGCRPN 472
            +  +L   M+++G  PN
Sbjct: 588 TKLMELQDRMLKAGFLPN 605



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 4/226 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L + Y    +  +A +   +++  G     +     + SL   +R   A    + +  +
Sbjct: 401 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED 460

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC--NKGLLS 315
              P+    N ++ +FC+   +  A+ +   M +  + P+  TY +LI   C  N+ +  
Sbjct: 461 SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDG 520

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +  +  M ++ + P+      L+ G+CK+G   +A  +           +  ++N+L+
Sbjct: 521 EGLMVE--MVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESFNSLV 578

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             Y  VGN      L + ML+ G   + LT   +I G+ K  +  K
Sbjct: 579 KVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 624


>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g40400-like [Cucumis sativus]
          Length = 636

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 233/478 (48%), Gaps = 17/478 (3%)

Query: 52  VSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPF---- 107
           + E+  K+  NP+   +  LP+ +    + V +  SHL  ++  +L  L +H+       
Sbjct: 46  IPESEAKLIVNPL---YHFLPQNQNP-FNIVELVSSHL-KTNNPRLALLQSHIKELIPHL 100

Query: 108 ---RVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILR 164
              ++  +LL+ Q ++V +L FF WV+      L+   + +++HIL  +R+F  +   L 
Sbjct: 101 GHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAWSRQFPLAMKFLS 160

Query: 165 GILD-SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
            +++ S        +F +++     C+ +P++F++L K Y        +  +F +M   G
Sbjct: 161 ELIELSKDVSSSEDVFQNLVLCTEHCNWNPVIFEMLIKAYVKLDLIHESYWSFKKMVKLG 220

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F+P + +CN  L+ L   +        Y+EM R  +  N YT N++ +  C+ G + +  
Sbjct: 221 FVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVLCRDGDVNKIN 280

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
              + ME  GF P V TYNTLI  +  +G L  A     +M + G+ P+++++ +L+ G 
Sbjct: 281 GFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGL 340

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ G++ EA+++F  M    + P+VV YNTLI  Y + G  +   SL  EM+  GI  D 
Sbjct: 341 CRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDS 400

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            T   L+ G  +EG+   A  LV ++ K  +      Y  LI   C       A  L + 
Sbjct: 401 FTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLER 460

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           ++    +P+  I+  L+ +FC++ +   A  + LEM+ +   P     ++ Y  L HC
Sbjct: 461 ILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPT----TDTYKSLIHC 514



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 141/324 (43%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P + + N  + S +   R++ A   YK M R  + P++ +   +M   C+LG
Sbjct: 285 KMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLG 344

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A ++F  M   G  P V  YNTLI  +C  G+L  A    + M   GI P+  T  
Sbjct: 345 RVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCR 404

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G+ ++G+L  A  +  E++   V+     Y  LI    +        SL E +L +
Sbjct: 405 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED 464

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             + D   YN LI   C+     +A  L  ++   +  P   TY +LI   C    S   
Sbjct: 465 SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDG 524

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M+ S   P+  I   L++ +C+  + D+A  +L+   +     DS   + L   
Sbjct: 525 EGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKV 584

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G +   M+L  +M   G LP
Sbjct: 585 YRDVGNETKLMELQDRMLKAGFLP 608



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 98/213 (46%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N + F  LI  + K   +HE+   F +M      PNV+  N ++NG  ++ +      LY
Sbjct: 189 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 248

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM R G+  +  T+N L   LC++G   K    ++ +++    P+  TY+ LI     R
Sbjct: 249 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 308

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E AF LYK M R G  P+   +  LM   C+      A ++   M+++ M PD ++ 
Sbjct: 309 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 368

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L       G  + A  L  +M   G+ P  F
Sbjct: 369 NTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSF 401



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 35/278 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N     M++ A+ KL +I  +   FK M  +GF+P+V   N +++G       +   +  
Sbjct: 189 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 248

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G+  N  TFN L +  C+ G +++                       ING+   
Sbjct: 249 EEMGRIGVHSNAYTFNILTYVLCRDGDVNK-----------------------INGF--- 282

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
                     E+M   G   D++TYN LI    + G+ + A YL K + +  ++P+  +Y
Sbjct: 283 ---------LEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSY 333

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++L+ G C       A QL+  MI  G  P+  ++  L+  +C++     A  +L EM+ 
Sbjct: 334 TSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIG 393

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + PDS     L  G    G+   A+ L  +++  G+
Sbjct: 394 IGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGV 431



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 131/318 (41%), Gaps = 35/318 (11%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + ++ L  +Y  R +  +A   +  M   G +P + S    +  L    RV  A  
Sbjct: 292 DPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQ 351

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    + P+V   N ++ A+CK G+++ A  +   M  +G  P   T   L+ G+ 
Sbjct: 352 LFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYG 411

Query: 310 NKGLLSLAMKF--------------------------------KNLMEK---NGIQPNVI 334
            +G L  A+                                  K+L+E+   +  QP+  
Sbjct: 412 REGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSD 471

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI  FC+   + EA  +  EM   N  P   TY +LI+   ++  S  G  L  EM
Sbjct: 472 IYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEM 531

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + + +  D     AL+ G CKEG   KA  L+    ++    ++ ++++L+       N 
Sbjct: 532 VESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLVKVYRDVGNE 591

Query: 455 ERAFQLYKSMIRSGCRPN 472
            +  +L   M+++G  PN
Sbjct: 592 TKLMELQDRMLKAGFLPN 609



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 4/226 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L + Y    +  +A +   +++  G     +     + SL   +R   A    + +  +
Sbjct: 405 ILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERILED 464

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC--NKGLLS 315
              P+    N ++ +FC+   +  A+ +   M +  + P+  TY +LI   C  N+ +  
Sbjct: 465 SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSVDG 524

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +  +  M ++ + P+      L+ G+CK+G   +A  +           +  ++N+L+
Sbjct: 525 EGLMVE--MVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESFNSLV 582

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             Y  VGN      L + ML+ G   + LT   +I G+ K  +  K
Sbjct: 583 KVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 628


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/458 (27%), Positives = 229/458 (50%), Gaps = 15/458 (3%)

Query: 87  SHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIV 146
           +HL+HS+    + L+  L P      LL+  ++Y L L     +QT   +S      + +
Sbjct: 57  THLLHSN----STLTLTLIP-----QLLQKCQNYPLLLP--NLIQTIASTSPNPSIIATL 105

Query: 147 LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP---LVFDLLFKTY 203
           +H L +++K   ++S+L  I+         ++ DS++ +     +S    +VFDLL +TY
Sbjct: 106 IHFLVQSKKLPEAQSLLLRIIRKSGVS-HVEVIDSLISTSSSNLNSNQNVVVFDLLIRTY 164

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
              +K R  ++ F  +R  GF   I +CN  L +++    VD+A   Y++  ++    NV
Sbjct: 165 VQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNV 224

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           YTLN++++A CK G ++        ME  G    + TYNTL++ +C +GL+S A    + 
Sbjct: 225 YTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDC 284

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G++P + T+N LI G CK+G    A R+  EM    + PN  T+N ++    +  +
Sbjct: 285 MAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKED 344

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                 ++ EML+ G+  D++++++++    + G+  +A    + +    LVP+   Y+ 
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C   +   A ++   M+  GC  +   +  L++  C+ +  D A E+  EM+E+ 
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG 464

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + PD   L+ L  G    G    A+ LF  M +R L P
Sbjct: 465 VFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKP 502



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   Y        A     +M + G +  + + N  L+ L   + +D A   +KE
Sbjct: 400 VIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE 459

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ YTL  ++H +CK G + +A+ +F+ M      P V TYNTL+ G C  G 
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M    I P+ I+F+ LI GFC  G + EA R++ EMK   + P +VT NT
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY + GN          M+  G+  D +TYN LI    KE    +A +L+ ++++  
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+PN  TY+A++ G       + A  +   MI  G  P+K  +  L++ +   ++   A 
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699

Query: 494 EVLLEMLEKCMAPD 507
            V  EML++   PD
Sbjct: 700 RVHDEMLQRGFVPD 713



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 172/354 (48%), Gaps = 16/354 (4%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLP--------IIESCNKFLSSLLDSERVDIA 247
           ++ L         +  A     +M   G  P        ++ESC K    + ++ERV   
Sbjct: 297 YNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRK--EDVWEAERV--- 351

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM +  + P++ + + ++  F + G + RA+  F+ M+ +G +P    Y  LI+G
Sbjct: 352 ---FNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C    +S A+K +N M + G   +V+T+NTL+ G C+   L +A+ +F EM    V P+
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             T  TLI+GY + GN     SL+E M    +K D++TYN L+ G CK G+ +KA  L  
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    + P+  ++S LI G C       AF+L+  M   G +P       ++  + +  
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  +A + L  M+ + + PD I  + L +        + A  L   ME RGLLP
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLP 642



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 153/286 (53%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + ++ L       K   +A + F +M + G  P   +    +        +  
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK 487

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++ M    + P+V T N +M  FCK+G +E+A E++ +M S    PS  +++ LI+
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C+ GL+S A +  + M++ GI+P ++T NT+I G+ + G L +AN   + M +  V P
Sbjct: 548 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TYNTLIN + +  N +    L   M   G+  +++TYNA++ G  + G+ ++A  ++
Sbjct: 608 DCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVL 667

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             +    + P+ STY++LI G   + N + AF+++  M++ G  P+
Sbjct: 668 HKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 192/382 (50%), Gaps = 4/382 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+    S++   ++ D +L    +C ++   F+ +      ++    A   F +M 
Sbjct: 299 ALINGLCKEGSYERAKRVLDEML-GVGLCPNAA-TFNPMLVESCRKEDVWEAERVFNEML 356

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + S +  +     +  +  AL ++++M+   + P+     ++++ +C+   + 
Sbjct: 357 QRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVS 416

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
            A+++   M   G +  V TYNTL++G C   +L  A + FK ++E+ G+ P+  T  TL
Sbjct: 417 GALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVER-GVFPDFYTLTTL 475

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+CK G + +A  +F  M   ++ P+VVTYNTL++G+ +VG  E    L+ +M+   I
Sbjct: 476 IHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREI 535

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
               ++++ LI G C  G   +A  L  ++ +  + P   T + +I G     N  +A  
Sbjct: 536 FPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND 595

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
              +MI  G  P+   +  L+++F + E+FDRA  ++  M E+ + P+ +  + +  G  
Sbjct: 596 FLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFS 655

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G+ + A  +  KM  +G+ P
Sbjct: 656 RHGRMQEAEMVLHKMIDKGINP 677



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 170/348 (48%), Gaps = 4/348 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  +   ++   +   A   F +M+  G +P        ++    ++ V  AL    EM 
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +V T N +++  C+  +++ A E+FK M   G  P   T  TLI G+C  G ++
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M    ++P+V+T+NTL+ GFCK G++ +A  ++ +M +  + P+ ++++ LI
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG+  +G       L++EM   GIK  ++T N +I G  + G   KA   +  +    + 
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI      +N +RAF L  +M   G  PN   +  ++  F ++     A  V
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           L +M++K + PD    + L +G  +  KD +  A ++  +M  RG +P
Sbjct: 667 LHKMIDKGINPDKSTYTSLING--YVSKDNMKEAFRVHDEMLQRGFVP 712



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 189/460 (41%), Gaps = 47/460 (10%)

Query: 121 VLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF----KSSESILRGILDSDSFDLPS 176
           V  L   T+VQ  K     L   S    +L K R F     +  ++L  I+     DL  
Sbjct: 156 VFDLLIRTYVQARK-----LREGSEAFQLLRK-RGFCVSINACNALLGAIVKVGWVDLAW 209

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+++  + S  + +   L  +++        K  N      +M + G    + + N  ++
Sbjct: 210 KVYEDFVKSGNIVNVYTL--NIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVN 267

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +      V  A G    M    + P ++T N +++  CK G  ERA  V   M  +G  P
Sbjct: 268 AYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCP 327

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+N ++   C K  +  A +  N M + G+ P++I+F++++  F + G+L  A   F
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 357 SEMKATNVSPN-----------------------------------VVTYNTLINGYGQV 381
            +MK   + P+                                   VVTYNTL+NG  + 
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              +    L++EM+  G+  D  T   LI G CK+G   KA  L + +   SL P+  TY
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + L+ G C     E+A +L+  MI     P+   F +L++ FC       A  +  EM E
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           K + P  +  + +  G    G    A      M   G+ P
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPP 607



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 39/228 (17%)

Query: 368 VVTYNTLINGYGQ-----------------------------------VGNSEMGASLYE 392
           VV ++ LI  Y Q                                   VG  ++   +YE
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           + +++G  V++ T N ++  LCK+GK       + ++++  +  +  TY+ L+   C R 
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               AF L   M   G +P    +  L++  C+   ++RA  VL EML   + P++   +
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 513 ELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            +   +  C K+++  A ++F +M  RG++P        +     NGE
Sbjct: 334 PML--VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGE 379


>gi|255542890|ref|XP_002512508.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548469|gb|EEF49960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 444

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 199/389 (51%), Gaps = 6/389 (1%)

Query: 98  TALSTHL---TPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           + L THL    P  + H LL    D  L+L +FTW Q     S +LE    +LH L   +
Sbjct: 50  SELKTHLKSTNPIALLHQLLTSGADSDLTLRYFTWSQKELKLSHSLELTFRMLHSLAYAK 109

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           K+    S L   + +D     S +F +I  S     ++ ++ D+L    A   K R   +
Sbjct: 110 KYSKIRSFLDNCVQNDKNYPVSFIFHAISVSGDSFCANSIIVDILVWADAKNLKTRLGFE 169

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F +  DYG    + SCN  +S L+   + D  L   KEM+ + I PN  T N+++  FC
Sbjct: 170 AFKRASDYGLKLSVTSCNPLMSGLVKMYKADAIL---KEMKADGICPNEVTFNILIDGFC 226

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
               +  A++VF  M   G  P+V TYN+LI+G CN G ++ A   ++ M  + ++PN+I
Sbjct: 227 NDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNII 286

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T N L+ GFCK   + +A  +F +M    ++PNV TYN LI+ Y +  N E   +LY  M
Sbjct: 287 THNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRIM 346

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           L  G+  D+ TYN LI+GLC++G  + A   V ++D   L  +  TY+ L+   C +   
Sbjct: 347 LGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGEM 406

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           ++  +L   M + G +P++  +  ++  +
Sbjct: 407 KKTLRLLDEMCKKGLKPSQLTYNTMIDGY 435



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 136/258 (52%), Gaps = 3/258 (1%)

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           E FK     G   SVT+ N L+SG          +K    M+ +GI PN +TFN LI GF
Sbjct: 169 EAFKRASDYGLKLSVTSCNPLMSGLVKMYKADAILK---EMKADGICPNEVTFNILIDGF 225

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C    +  A ++F+EM    V PNVVTYN+LING    G      +L ++M+ + ++ +I
Sbjct: 226 CNDKNVSVAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATTLRDQMVNSCLEPNI 285

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +T+NAL+ G CK    K+A  L +D+ K  + PN +TY+ LI   C  +N E AF LY+ 
Sbjct: 286 ITHNALLNGFCKNKMVKQAGELFEDMPKQRITPNVTTYNILIDAYCKDENMEDAFALYRI 345

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+  G  P+   +  L+   C+  D + A   + EM  K +  D I  + L   L + G+
Sbjct: 346 MLGKGVYPDVSTYNCLIVGLCRKGDLEGARNRVSEMDTKHLKADLITYNILMDSLCNKGE 405

Query: 524 DELAMKLFRKMEIRGLLP 541
            +  ++L  +M  +GL P
Sbjct: 406 MKKTLRLLDEMCKKGLKP 423


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 208/411 (50%), Gaps = 11/411 (2%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP- 193
           PS L    H I     TK R    +     G L ++S  +     D++   YRM   +P 
Sbjct: 37  PSFLFFNHHHITTSTCTKKRSLPQNNG---GFLSNNSISID----DALASFYRMLRMNPR 89

Query: 194 ---LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
              + F     + A +K++        QM  +G    + S N  ++ L     V  A+  
Sbjct: 90  PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             +M +  I P+  T N +++  C  G I+ AV +F  M   G  P V +Y+T+I+G C 
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G  S+A++    ME+ G +PN++ + T+I   CK   +++A  + SEM    + P+VVT
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+T+++G+  +G+      L+ EM+   +  + +T+  L+ GLCKEG   +A  + + + 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K    PNA TY+AL+ G C+    + A ++   M+  GC P  H + +L++ +C+    D
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  +L+EM EK + PD++  S L  GL   G+ + A+ LF++M   GLLP
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 165/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L        + + A   F +M   G  P + S +  ++ L  S    +AL   ++
Sbjct: 163 ITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRK 222

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN+     ++ + CK  ++  A+++   M   G  P V TY+T++ G C+ G 
Sbjct: 223 MEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGH 282

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A    N M    + PN +TF  L+ G CK+G + EA  +F  M      PN  TYN 
Sbjct: 283 LNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++GY      +    + + M+  G    + +YN LI G CK  +  +A  L+ ++ +  
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TYS L+ G C     + A  L+K M  SG  P+   +  L+   C++   D A 
Sbjct: 403 LTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEAL 462

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L  M E  + PD ++ + L  G+   GK E+A +LF K+   G+ P
Sbjct: 463 KLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQP 510



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 161/324 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P + +    + SL     V+ A+    EM    I P+V T + ++H FC LG
Sbjct: 222 KMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLG 281

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  +F  M     +P+  T+  L+ G C +G++S A      M K G +PN  T+N
Sbjct: 282 HLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYN 341

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G+C   ++ EA ++   M     +P V +YN LINGY +    +   SL  EM   
Sbjct: 342 ALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK 401

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D +TY+ L+ GLC+ G+ ++A  L K++  + L+P+  TYS L+ G C   + + A
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L KSM  S   P+  ++ +L+         + A E+  ++    + P     + +  G
Sbjct: 462 LKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKG 521

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G  + A +LFRKME  G LP
Sbjct: 522 LLKEGLSDEAYELFRKMEDDGFLP 545



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 166/346 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  +  +        +A D   +M D G  P + + +  L        ++ A 
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM    + PN  T  +++   CK G++  A  VF+ M   G  P+  TYN L+ G+
Sbjct: 288 ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +  A K  ++M   G  P V ++N LI G+CK+ +L EA  +  EM    ++P+ 
Sbjct: 348 CLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDT 407

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY+TL+ G  QVG  +   +L++EM  +G+  D++TY+ L+ GLCK G   +A  L+K 
Sbjct: 408 VTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS 467

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + ++ + P+   Y+ LI G  +    E A +L+  +   G +P    + +++    +   
Sbjct: 468 MQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGL 527

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D A E+  +M +    P+S   + +  G         A++L  +M
Sbjct: 528 SDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           +S+ +  L +D+ DL S++ D      R      + +  +   +        AT  F +M
Sbjct: 240 DSLCKDTLVNDAMDLLSEMVD------RGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
                +P   +    +  L     V  A   ++ M +    PN YT N +M  +C    +
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A +V   M   G  P V +YN LI+G+C +  L  A      M +  + P+ +T++TL
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G C+ G+  EA  +F EM ++ + P+++TY+TL++G  + G+ +    L + M  + I
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + DI+ YN LI G+   GK + A  L   L  + + P   TY+ +I G      S+ A++
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           L++ M   G  PN   + +++  F QN+D   A  ++ EM+ K  + DS
Sbjct: 534 LFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADS 582



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 120/266 (45%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I+ A+  F  M  M   PSV  +   +     K   S  +   N M+  G+  NV + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   C+   +  A  +  +M    + P+ +T+NTLING    G  +    L+ EM+R G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            + D+++Y+ +I GLCK G T  A  L++ +++    PN   Y+ +I   C       A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   M+  G  P+   +  ++  FC     + A  +  EM+ + + P+++  + L  GL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G    A  +F  M  +G  P  +
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAY 338


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/475 (28%), Positives = 230/475 (48%), Gaps = 39/475 (8%)

Query: 102 THLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSES 161
           + L P  V   L+K++ D   +L+FF             E++ ++ HIL     +  + S
Sbjct: 90  SALAPIWVSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCGMFYLDARS 149

Query: 162 ILR-GILDSDSFDLPSKLFDSILYSYR-MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           +++  IL    F  P   F  +L+S R +C     VFD LF           A   F +M
Sbjct: 150 VIKEWILLGREF--PGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKM 207

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
             +  LP + SCN+ L  L  S +  +AL F+K+M    +SP+V+T NMV+    + G +
Sbjct: 208 NKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDL 267

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM--------------------- 318
           E A  +F+ M++ G  P + TYN+LI G+   G+L+ A+                     
Sbjct: 268 EAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSL 327

Query: 319 -----KFKNL---------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
                KF+ +         M++ G+QPNV+T++TLI  FCK G L EAN+ F +M    +
Sbjct: 328 INCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGL 387

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN  TY +LI+   ++G+      L  EM + G+ ++I+TY AL+ GLC++G+ ++A  
Sbjct: 388 QPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEE 447

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L   L K     N   Y++L  G    K  E+A  + + M +   +P+  ++   +   C
Sbjct: 448 LFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLC 507

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  + + +  V+ EM++  +  +S I + L       GK   A+ L ++M+  G+
Sbjct: 508 RQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGI 562



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 35/376 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y        A   F +M+D G  P + + N  ++     ER+  A  +   
Sbjct: 287 VTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHG 346

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M++  + PNV T + ++ AFCK G++  A + F +M  +G  P+  TY +LI  +C  G 
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K ++ M++ G+  N++T+  L+ G C+ G++ EA  +F  +     + N   Y +
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE----------------- 416
           L +GY +    E    + EEM +  +K D+L Y   I GLC++                 
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526

Query: 417 ------------------GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                             GKT +A  L++++    +     TY  LI G C     ++A 
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + +  M R+G +PN  I+  L+   C+N+  + A  +  EML+K ++PD ++ + L  G 
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGN 646

Query: 519 HHCGKDELAMKLFRKM 534
              G    A+ L  +M
Sbjct: 647 MKHGNPGEALSLRNRM 662



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 172/388 (44%), Gaps = 35/388 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + ++ L   +   ++   A +    M+  G  P + + +  + +   +  +  A 
Sbjct: 317 CEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEAN 376

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+ +M R  + PN +T   ++ A CK+G +  A ++   M+  G   ++ TY  L+ G 
Sbjct: 377 KFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGL 436

Query: 309 CNKG-----------------------------------LLSLAMKFKNLMEKNGIQPNV 333
           C  G                                   ++  AM     M K  ++P++
Sbjct: 437 CEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDL 496

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + T I+G C++ ++ ++  +  EM    ++ N   Y TLI+ Y +VG +    +L +E
Sbjct: 497 LLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQE 556

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   GIK+ ++TY  LI GLCK G  ++A      + +N L PN   Y+ALI G C    
Sbjct: 557 MQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDC 616

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E A  L+  M+  G  P+K ++  L+    ++ +   A  +   M+E  M  D    + 
Sbjct: 617 LEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTS 676

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G    G+ +LA  L  +M  +G++P
Sbjct: 677 LIWGFSRYGQVQLAKSLLDEMLRKGIIP 704



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 146/308 (47%), Gaps = 2/308 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+ +        +LF ++L +    +    ++  LF  Y   K    A D   +M 
Sbjct: 431 ALLDGLCEDGRMREAEELFGALLKAGWTLNQQ--IYTSLFHGYIKAKMMEKAMDILEEMN 488

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P +      +  L     ++ ++   +EM    ++ N Y    ++ A+ K+G   
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV + + M+ +G   +V TY  LI G C  GL+  A+++ + M +NG+QPN++ +  LI
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK   L EA  +F+EM    +SP+ + Y +LI+G  + GN     SL   M+  G++
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGME 668

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D+  Y +LI G  + G+ + A  L+ ++ +  ++P+      L+       +   A  L
Sbjct: 669 LDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALAL 728

Query: 461 YKSMIRSG 468
           +  M R G
Sbjct: 729 HDDMARRG 736



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 143/328 (43%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M+  G    I +    L  L +  R+  A   +  + +   + N      + H + K  
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++E+A+++ + M      P +  Y T I G C +  +  +M     M   G+  N   + 
Sbjct: 476 MMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYT 535

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI  + K GK  EA  +  EM+   +   VVTY  LI+G  ++G  +     ++ M RN
Sbjct: 536 TLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRN 595

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++ +I+ Y ALI GLCK    ++A  L  ++    + P+   Y++LI G     N   A
Sbjct: 596 GLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEA 655

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M+  G   +   +  L+  F +      A  +L EML K + PD ++   L   
Sbjct: 656 LSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRK 715

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFD 545
            +  G    A+ L   M  RGL+    D
Sbjct: 716 YYELGDINEALALHDDMARRGLISGTID 743



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 133/302 (44%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R A + F  +   G+    +         + ++ ++ A+   +EM +  + P++    
Sbjct: 441 RMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYG 500

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             +   C+   IE ++ V + M   G   +   Y TLI  +   G  + A+     M+  
Sbjct: 501 TKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL 560

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+  V+T+  LI G CK G + +A R F  M    + PN++ Y  LI+G  +    E  
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +L+ EML  GI  D L Y +LI G  K G   +A  L   + +  +  +   Y++LI G
Sbjct: 621 KNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWG 680

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                  + A  L   M+R G  P++ +   L+  + +  D + A  +  +M  + +   
Sbjct: 681 FSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISG 740

Query: 508 SI 509
           +I
Sbjct: 741 TI 742



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 93/205 (45%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++  L   Y    K   A +   +M+D G    + +    +  L     V  A+ ++  M
Sbjct: 533 IYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM 592

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            RN + PN+     ++   CK   +E A  +F  M   G  P    Y +LI G+   G  
Sbjct: 593 TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNP 652

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+  +N M + G++ ++  + +LI+GF + G++  A  +  EM    + P+ V    L
Sbjct: 653 GEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICL 712

Query: 375 INGYGQVGNSEMGASLYEEMLRNGI 399
           +  Y ++G+     +L+++M R G+
Sbjct: 713 LRKYYELGDINEALALHDDMARRGL 737


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/444 (29%), Positives = 221/444 (49%), Gaps = 8/444 (1%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           ++T   V  V+ K Q    L+LEF  WV   K    ++E+  +V+H+L  ++++  +  I
Sbjct: 4   NMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFI 63

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +  +++ +    P ++ D+++ SY +C SSP VFD L +T         A +   +++  
Sbjct: 64  MGNLMNVNGIS-PLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLD 122

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF   + + N FLS LL    V+     YKEM       NV T N++++A  K G +  A
Sbjct: 123 GFWVTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEA 182

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME---KNGIQPNVITFNTL 339
           V V       G  P+V T+N +I G    G + LA+K    ME      ++P+ +T+N+ 
Sbjct: 183 VSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSF 242

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + GFCK G L  A     EM    + PNV TY TL++GY +VG+ E    L +E++  G+
Sbjct: 243 VNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGL 302

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             + + YN++I  L  EG  + A+ L+ D+    + P+  TYS +I G C       AF+
Sbjct: 303 LPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFK 362

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
             + ++      +     ++++  C++ +   A ++L  M  + + PD +    L     
Sbjct: 363 FLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLID--R 420

Query: 520 HC--GKDELAMKLFRKMEIRGLLP 541
           HC  GK E A++++ KM   G  P
Sbjct: 421 HCKDGKVENAIQVYEKMIKTGEKP 444



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 154/316 (48%), Gaps = 11/316 (3%)

Query: 185 SYRMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++R+CD         + ++++ +    +       A+     M D    P   + +  + 
Sbjct: 290 AFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIE 349

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L  +  ++ A  F + +    +  + ++ N+V++  C+   +  A ++  NM   G +P
Sbjct: 350 GLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVP 409

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V T+ TLI  HC  G +  A++    M K G +PN++ +N++I GF K+G    A  + 
Sbjct: 410 DVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLI 469

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             ++   +  +VVTYNTLI+GY   G  +   +L+ EM  +GI    +TYN LI  LCK 
Sbjct: 470 DTLRRMGLF-DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKA 528

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A  L+K +    L+P+  TY+ LIT    + + E   +L+  M+  G  P++  +
Sbjct: 529 GHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVPDRQTY 588

Query: 477 EMLMSTFCQNE--DFD 490
           + ++    Q E  +FD
Sbjct: 589 QTMVIPLLQEESVEFD 604



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 153/312 (49%), Gaps = 7/312 (2%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLP---IIESCNKFLSSLLDSERVDIALGFYKEMR 255
           L   Y       NA     ++ + G LP   I  S   +LS   D E   + L    +M 
Sbjct: 277 LVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLL---SDMI 333

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             RI P+ +T ++V+   C+ G +  A +  + +  M  +    ++N +I+  C    L+
Sbjct: 334 DKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLA 393

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M   G+ P+V+TF TLI   CK GK+  A +++ +M  T   PN++ YN++I
Sbjct: 394 GAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVI 453

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG+ + G+ +    L + + R G+  D++TYN LI G C  GK  +A  L  ++  + ++
Sbjct: 454 NGFAKEGSFDPAILLIDTLRRMGL-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGIL 512

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ LI   C   +  +A +L K M+  G  P+   + +L+++F +    +   E+
Sbjct: 513 ASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVIEL 572

Query: 496 LLEMLEKCMAPD 507
              M+ K + PD
Sbjct: 573 HDYMVLKGVVPD 584



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 167/370 (45%), Gaps = 27/370 (7%)

Query: 208 KFRNATDTFCQMRDY-----GFLPIIESCNKFLSSLLDSERVDIALGFYKE-MRRNRISP 261
           KF+N+     +  D+       L  IESC   +  L++S+R D AL      M  N ISP
Sbjct: 16  KFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFIMGNLMNVNGISP 75

Query: 262 NVYTLNMVMHAF--CK---------------LGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +  L+ ++ ++  CK               +G  E A EV   ++  GF  +V  +N  
Sbjct: 76  -LEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFWVTVHAWNNF 134

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           +S       ++   K    M   G   NV TFN +I+   K+G+L EA  +      T +
Sbjct: 135 LSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRSLKTGI 194

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEM-LRNG--IKVDILTYNALILGLCKEGKTKK 421
            PNVVT+N +I+G  ++G  ++   L  +M + +G  +K D +TYN+ + G CK G    
Sbjct: 195 WPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAV 254

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A    K++    + PN  TY+ L+ G     + E AF+L   ++  G  PN  I+  ++ 
Sbjct: 255 AEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIH 314

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 D + A+ +L +M++K + PD    S +  GL   G    A K  + +    L+ 
Sbjct: 315 WLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVR 374

Query: 542 KGFDKLRTIN 551
             F     IN
Sbjct: 375 DAFSHNVVIN 384



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 36/345 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N F++       + +A  F KEM    I PNV T   ++  + ++G +E A  +   +  
Sbjct: 240 NSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVE 299

Query: 292 MGFIPSVTTYNTLI-----------------------------------SGHCNKGLLSL 316
            G +P+   YN++I                                    G C  G L+ 
Sbjct: 300 KGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNE 359

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A KF  ++ +  +  +  + N +I   C+   L  A ++ + M    + P+VVT+ TLI+
Sbjct: 360 AFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLID 419

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + + G  E    +YE+M++ G K ++L YN++I G  KEG    A  L+  L +  L  
Sbjct: 420 RHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMGLF- 478

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY+ LI G C     ++AF L+  M  SG   +   +  L+++ C+     +A E++
Sbjct: 479 DVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAKELM 538

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             M+ + + PD +  + L +        E  ++L   M ++G++P
Sbjct: 539 KMMVLRGLIPDYVTYTILITSFSKKCSPEEVIELHDYMVLKGVVP 583



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 19/262 (7%)

Query: 322 NLMEKNGIQPNVI----------------TFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           NLM  NGI P  +                 F+ L+    + G    A  + ++++     
Sbjct: 66  NLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLDGFW 125

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
             V  +N  ++   ++ +      +Y+EM+  G   ++ T+N +I  L KEG+  +A  +
Sbjct: 126 VTVHAWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSV 185

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSGC--RPNKHIFEMLMST 482
           +    K  + PN  T++ +I G       + A +L + M + SGC  +P+   +   ++ 
Sbjct: 186 IYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNG 245

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           FC+  +   A E   EML K + P+    + L  G    G  E A +L  ++  +GLLP 
Sbjct: 246 FCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPN 305

Query: 543 GFDKLRTINCAPENGEKESGGL 564
                  I+     G+ E   L
Sbjct: 306 SVIYNSIIHWLSMEGDMEGASL 327


>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
           cujabensis]
          Length = 409

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 196/383 (51%), Gaps = 2/383 (0%)

Query: 128 TWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           TW+ +   S+   TL ++  ++H L  ++    ++S++  ++        S +F ++L +
Sbjct: 1   TWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAAVLET 60

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
                S   VF  L   Y      R+A + +    ++      ++C K L  L+  +   
Sbjct: 61  KGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFK 120

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PSV +YNTL+
Sbjct: 121 LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLM 180

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G+   G L    + K+ M  +G  P+V T++ LI G CK+ K+  AN +F EM    + 
Sbjct: 181 NGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLV 240

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A  L
Sbjct: 241 PNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDL 300

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++    L P+  TY+ LI G C   + + AF   K MI+   R +   +  L+S  CQ
Sbjct: 301 IDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQ 360

Query: 486 NEDFDRAAEVLLEMLEKCMAPDS 508
                 A ++L EML   + PD+
Sbjct: 361 EGRSVDAEKMLREMLSVGLXPDA 383



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 157/311 (50%), Gaps = 6/311 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLLFKTYAHRKKFRNAT 213
           F +   +L  ++    F L    ++ IL     C   +S   F++L   +      R A 
Sbjct: 103 FDTCRKVLEHLMKLKYFKLVWGFYEEIL----ECGYPASLYFFNILMHRFCKDGDIRVAQ 158

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F  +  +G  P + S N  ++  +    +D        M  +   P+VYT +++++  
Sbjct: 159 SVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGL 218

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK   ++ A E+F  M   G +P+  T+ TLI GHC  G + LAM+    M    + P++
Sbjct: 219 CKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDL 278

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+NTLI+G CKKG L +A+ +  EM    + P+  TY TLI+G  + G+ +      + 
Sbjct: 279 ITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKR 338

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M++  I++D + Y ALI GLC+EG++  A  +++++    L P+A TY+ +I   C + +
Sbjct: 339 MIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGD 398

Query: 454 SERAFQLYKSM 464
             +  +L K M
Sbjct: 399 VWKGSKLLKEM 409


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/497 (27%), Positives = 243/497 (48%), Gaps = 9/497 (1%)

Query: 44  NPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTH 103
           +P F  PS+S   ++ + +  P     L  P     + ++     L+   +  L  L+  
Sbjct: 5   SPIF--PSLSLLRLRKSYHWKPRHESKLTRP-----ELIDRISRLLVLGRYHALKDLNFQ 57

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
            + + +  VLLK++ + + SL FF            + +H  ++HIL++ R +  + S L
Sbjct: 58  FSDYILDSVLLKLKFNPIASLHFFKLASKQSNFRPNVNSHCKLVHILSRARMYDETRSYL 117

Query: 164 RGILDSDSFDLPS-KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
             ++     +  S  +++ ++  +     SP VFD++ K Y  +   +NA   F  M   
Sbjct: 118 NELVTPSKNNYSSLVVWNELVRVFEDFKFSPTVFDMILKIYCEKGMIKNALHVFDNMGKL 177

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + SCN+ LSSL+       A+  Y  + R  I P+V+T +++++A+CK G +  A
Sbjct: 178 GCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVA 237

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V+  K M+ +GF  +V TYN+LI G  + G +  A     LM + GI  N +T   LI G
Sbjct: 238 VDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKG 297

Query: 343 FCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           +C++ KL EA ++  EM ++  +  +   Y  LI+GY +V   +    L +EML  G+++
Sbjct: 298 YCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRM 357

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++   NALI G CK G+  +A  L+  +    L P + +YS L+ G C      +A  +Y
Sbjct: 358 NLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVY 417

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R G + N      L+   C+   F+ A  V   ML++ + PD +    L   L   
Sbjct: 418 NEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKM 477

Query: 522 GKDELAMKLFRKMEIRG 538
           G+   A+ L+  +  RG
Sbjct: 478 GEFFRALALWNDILARG 494



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 161/376 (42%), Gaps = 48/376 (12%)

Query: 209 FRNATDTFCQ-------------MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +R   D +C+             M     LP IE  N  +  L  S++    +    EM 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SPNV T   ++  +C  G +++A   + +M   GF P+V   + ++S     G + 
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 316 ----LAMKFKNL-------------------MEKNGIQ------------PNVITFNTLI 340
               L  K  NL                   ++   I             PN + +N  I
Sbjct: 657 EANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAI 716

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK GK+ +A +IFS +     SP+  TY TLI+GY   GN     SL +EML+ G+ 
Sbjct: 717 AGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLA 776

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +I+TYNALI GLCK G   +A  L   L    L PN  +Y+ LI G C   N+  A  L
Sbjct: 777 PNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDL 836

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M++ G  P+   +  L+  FC+  D  +A  +L EM E     +     +L  G   
Sbjct: 837 RNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVK 896

Query: 521 CGKDELAMKLFRKMEI 536
           CG+ +   KL   M I
Sbjct: 897 CGEVKKIAKLHNMMHI 912



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 177/419 (42%), Gaps = 70/419 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   Y    K  +A     +M + G    +  CN  ++    + +V  A      M 
Sbjct: 327 YGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMV 386

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P  Y+ + +M  FC+ G++ +A+ V+  M  +G   +V T+N+L+ G C  G   
Sbjct: 387 DWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFE 446

Query: 316 LAMKFKNLMEKNGIQPNVIT-----------------------------------FNTLI 340
            A+   +LM K G+ P+ ++                                   FNT+I
Sbjct: 447 DALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMI 506

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK  K+ EA   F+ MK     P+ VTY TLI+GY ++GN E    + E+M +  I 
Sbjct: 507 NGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAIL 566

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             I  YN+LI GL K  KT++   L+ ++    L PN  TY  LI G C     ++AF  
Sbjct: 567 PSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTA 626

Query: 461 YKSMIRSGCRPNKHIFEMLMST----------------------FCQNEDFDR------- 491
           Y  MI  G  PN  I   ++S+                      F  +  FDR       
Sbjct: 627 YFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDG 686

Query: 492 ------AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                  A+ L E  +    P+S++ +   +GL   GK + A K+F  + +RG  P  F
Sbjct: 687 NLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNF 745



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 160/413 (38%), Gaps = 70/413 (16%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L K       F +A   +  M   G  P   S    L  L        AL  + ++    
Sbjct: 435 LLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARG 494

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              + Y  N +++ FCK+  +  A E F  M+ +GF P   TY TLI G+C  G +  A 
Sbjct: 495 YGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAF 554

Query: 319 KFKNLMEKN-----------------------------------GIQPNVITFNTLIFGF 343
           K K  MEK                                    G+ PNV+T+ TLI G+
Sbjct: 555 KVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGW 614

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD- 402
           C +G+L +A   + +M     +PNV+  + +++   ++G  +    L ++M+   + +D 
Sbjct: 615 CDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDH 674

Query: 403 ----------------------------------ILTYNALILGLCKEGKTKKAAYLVKD 428
                                              + YN  I GLCK GK   A  +   
Sbjct: 675 GYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSS 734

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L      P+  TY  LI G     N   AF L   M++ G  PN   +  L++  C++ +
Sbjct: 735 LLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGN 794

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            DRA ++  ++  K +AP+ I  + L  G    G    A+ L  KM   G+ P
Sbjct: 795 LDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISP 847



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/230 (30%), Positives = 109/230 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L K        +   DT  +      LP     N  ++ L  S +VD A   +  + 
Sbjct: 677 FDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLL 736

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SP+ +T   ++H +   G +  A  +   M   G  P++ TYN LI+G C  G L 
Sbjct: 737 LRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLD 796

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + +   G+ PNVI++N LI G+CK G   EA  + ++M    +SP+++TY+ LI
Sbjct: 797 RAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALI 856

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            G+ + G+     +L +EM       +I  +  L+ G  K G+ KK A L
Sbjct: 857 YGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 130/262 (49%), Gaps = 3/262 (1%)

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           E+ +  E   F P+V  ++ ++  +C KG++  A+   + M K G  P++ + N L+   
Sbjct: 136 ELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSL 193

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            +KG+   A  ++  +    + P+V T + ++N Y + G   +     +EM   G ++++
Sbjct: 194 VRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNV 253

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYN+LI G    G  ++A  ++K + +  ++ N  T + LI G C +   E A ++ + 
Sbjct: 254 VTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLRE 313

Query: 464 MIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           M RS G   +++ + +L+  +C+    D A  +  EML   +  +  I + L +G    G
Sbjct: 314 MERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNG 373

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
           +   A +L  +M    L P+ +
Sbjct: 374 QVSEAERLLMRMVDWDLEPESY 395



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/264 (22%), Positives = 111/264 (42%), Gaps = 9/264 (3%)

Query: 116 VQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI-----LRGILDSD 170
           V  D  L   +F   + HK     L++  I   +   ++ F    S+     + G+  S 
Sbjct: 666 VNLDVFLDHGYFD--RLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSG 723

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
             D   K+F S+L   R        +  L   Y+      +A     +M   G  P I +
Sbjct: 724 KVDDAKKIFSSLLL--RGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIIT 781

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  ++ L  S  +D A   + ++    ++PNV + N+++  +CK G    A+++   M 
Sbjct: 782 YNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKML 841

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  PS+ TY+ LI G C +G +  A    + M +     N+  F  L+ G  K G++ 
Sbjct: 842 KEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVK 901

Query: 351 EANRIFSEMKATNVSPNVVTYNTL 374
           +  ++ + M  T     V+++  +
Sbjct: 902 KIAKLHNMMHITIPCAGVISHKQM 925


>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
           barbata]
          Length = 429

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 207/418 (49%), Gaps = 2/418 (0%)

Query: 126 FFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFTW+ +   S+   TL ++  ++H L  ++    ++S+++ ++          +F +I 
Sbjct: 1   FFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSAXAVFAAIX 60

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +         VF  L  TY      R+A + +   R++      ++C K L  L+  + 
Sbjct: 61  ETKGTQRXDIYVFSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKY 120

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             +  GF   +            N++MH FCK G I  A  VF  +   G  PSV +YNT
Sbjct: 121 FKLVWGFXXXIXXXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNT 180

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++G+   G L+   + K+ M  +G+QP+V T++ LI G CK+ K+ +AN +F EM    
Sbjct: 181 LMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 240

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN VT+ TLI+G+ + G  ++   +Y++ML   +  D++TYN LI GLCK+G  K+A 
Sbjct: 241 LXPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAH 300

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++    L  +  TY+ LI G C   + + AF+  K MI+   R +   +  L+S  
Sbjct: 301 DLIDEMSMKGLKXDKITYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGL 360

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           CQ      A ++L EML   + PD+   + + +     G      KL + M+  G  P
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAP 418



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 151/286 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +      R A   F  +  +G  P + S N  ++  +    ++        M 
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+VYT +++++  CK   ++ A E+F  M   G  P+  T+ TLI GHC  G + 
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LAM+    M    + P++IT+NTLI+G CKKG L +A+ +  EM    +  + +TY TLI
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G+ +      + M++  I++D + Y ALI GLC+EG++  A  +++++    L 
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 382

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           P+  TY+ +I   C + +  +  +L K M R+G  P+   + +LM+
Sbjct: 383 PDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMN 428



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 114/225 (50%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + +  ++ L    ++D A   + EM    + PN  T   ++   CK G ++ A
Sbjct: 205 GVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLA 264

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E++K M S   +P + TYNTLI G C KG L  A    + M   G++ + IT+ TLI G
Sbjct: 265 MEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDG 324

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A      M   N+  + V Y  LI+G  Q G S     +  EML  G+K D
Sbjct: 325 CCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPD 384

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             TY  +I   CK+G   K + L+KD+ +N   P+  TY+ L+ G
Sbjct: 385 TXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 109/217 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K  +A + F +M   G  P   +    +     + RVD+A+  YK+M 
Sbjct: 213 YSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVDLAMEIYKQML 272

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++ T N +++  CK G +++A ++   M   G      TY TLI G C +G L 
Sbjct: 273 SQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCCKEGDLD 332

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + +  M +  I+ + + +  LI G C++G+  +A ++  EM +  + P+  TY  +I
Sbjct: 333 AAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMII 392

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N + + G+   G+ L ++M RNG    ++TYN L+ G
Sbjct: 393 NEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 129 WVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
           W+ +      T +++  + + L+ ++ F+  +SI+R ++     D  + +F +IL +   
Sbjct: 90  WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAG- 148

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
              S  VFD L   Y       +A   F  +R+  F      C   L  +++S       
Sbjct: 149 TRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            FY E+      P V   N++++ FCK G I  A  +F  +   G  P+  ++NTLI+G 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L    + K  ME+N I P+V T++ LI G CK+G+L  A ++F EM+   + PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+  LI+G  +    +   + Y +ML  G+K D++ YN L+ GLCK G   KA  LV +
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+  TY+ LI G C   + E A ++ K M   G   +   F  L+S FC++  
Sbjct: 389 MKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A   L EM+E  M PD    + +  G    G  ++  KL ++M+I G  P
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 177/337 (52%), Gaps = 4/337 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +      R+A   F ++R  G  P   S N  ++ L  S  +D      K M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            NRI P+V+T ++++H  CK G ++ A ++F  M+  G  P+  T+  LI G      + 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM   + M   G++P+++ +NTL+ G CK G +++A ++  EMK   + P+ +TY TLI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY + G+ E    + + M   G+ +D + + ALI G C++G+ + A   ++++ +  + 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ +I G C + N +  F+L K M  +G +P    + +LM+  C+      A  +
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKL 530
           L  ML   + PD I  + L  G  HC  GK E  +KL
Sbjct: 526 LEAMLNLGVTPDDITYNILLEG--HCKNGKAEDLLKL 560



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 5/285 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      D+  +LFD +    R    + + F  L       ++  +A +T+ QM  
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEM--QQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLT 356

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P +   N  L+ L     V+ A     EM+   + P+  T   ++  +CK G +E 
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLES 416

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+E+ K M   G +     +  LISG C  G +  A +    M + G++P+  T+  +I 
Sbjct: 417 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVID 476

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+CKKG +    ++  EM+     P V+TYN L+NG  + G  +    L E ML  G+  
Sbjct: 477 GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           D +TYN L+ G CK G   KA  L+K  ++  L+ + + Y++L++
Sbjct: 537 DDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVS 578



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 99/207 (47%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +SE+      P V  YN LIN + + G+      ++ E+ + G++   +++N LI GLCK
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
                +   L K +++N + P+  TYS LI G C     + A QL+  M + G RPN   
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F  L+    ++   D A     +ML   + PD ++ + L +GL   G    A KL  +M+
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390

Query: 536 IRGLLPKGFDKLRTINCAPENGEKESG 562
           + G+ P        I+   + G+ ES 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESA 417


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 244/525 (46%), Gaps = 80/525 (15%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           S W  +  L+ +LTP  +   L  + ++ +L     + +  H P  L L T  I L IL 
Sbjct: 49  SQWHFIKHLAPNLTPSLLSSTLPTLHQNPILVETLLSHLHRH-PHCLDLNTRCITLCILY 107

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
           +    K S  IL+ IL + +   P+ +F+ + L   R+   + LVFDLL   Y   +K  
Sbjct: 108 RLPSPKPSFHILQPILHTTT---PTVIFNELSLARNRLNVKTTLVFDLLLSAYCQFRKPD 164

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A +    M++   +P  E+CN  LS LL   ++ +A   Y+EM +  I  ++ T N+++
Sbjct: 165 EALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMI 224

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKN-- 327
           +  C+ G  ++A +   +ME  G  P+V TYNT+I+G+C +G    A K FK + +KN  
Sbjct: 225 NILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLK 284

Query: 328 --------------------------------GIQPNVITFNTLIFGFCKKG-------- 347
                                           G+ PN +T+N LI G C KG        
Sbjct: 285 PDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAY 344

Query: 348 ---------------------------KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
                                      ++ EA  +  EM+   V P+VVTYN  INGY +
Sbjct: 345 RDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCR 404

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            GN++   SL++EM+   I+  + TY +LI    K  +  +A    K   K  ++P+   
Sbjct: 405 CGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIM 464

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           ++ALI G CV  N +RAFQL K M  +   P++  F  LM  +C+    + A ++L EM 
Sbjct: 465 FNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMK 524

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           E+ + PD I  + L SG    G  + A+++F +M     L  GFD
Sbjct: 525 ERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM-----LSLGFD 564



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 181/403 (44%), Gaps = 35/403 (8%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS + F+++        K++ A D    M  YG  P + + N  ++      + + A   
Sbjct: 215 SSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKI 274

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +K M+   + P+ YT N  +   CK   IE A  V   +   G +P+  TYN LI G CN
Sbjct: 275 FKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN 334

Query: 311 KGLLSLAMKFKNLM-----------------------------------EKNGIQPNVIT 335
           KG L  A  +++ M                                    + G++P+V+T
Sbjct: 335 KGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N  I G+C+ G   +A  +F EM   N+ P V TY +LI+ +G+          +++ +
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           + G+  DI+ +NALI G C  G   +A  L+K++D   +VP+  T++ L+ G C  +  E
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE 514

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A +L   M   G +P+   +  L+S + +  D   A EV  EML     P  +  + L 
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            G    G+ + A +L R+M+ +G+ P     L  I     N +
Sbjct: 575 QGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDD 617



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 136/273 (49%), Gaps = 2/273 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G +  + + N  + +L   +R++ A    KEMR   + P+V T N+ ++ +C+ G
Sbjct: 347 EMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCG 406

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM-KFKNLMEKNGIQPNVITF 336
             ++A+ +F  M      P+V TY +LI     +  +S A  KFK  + K G+ P++I F
Sbjct: 407 NAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI-KEGMLPDIIMF 465

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G C  G +  A ++  EM    V P+ VT+NTL+ GY +    E    L +EM  
Sbjct: 466 NALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKE 525

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            GIK D ++YN LI G  K G  K A  +  ++      P   TY+ALI G      ++ 
Sbjct: 526 RGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADH 585

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           A +L + M   G  P+   +  ++     N+D 
Sbjct: 586 AEELLREMQSKGITPDDSTYLYVIEAMKTNDDL 618


>gi|296081012|emb|CBI18516.3| unnamed protein product [Vitis vinifera]
          Length = 967

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 222/462 (48%), Gaps = 26/462 (5%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
           Y+ L    W+ L  ++  L   R  H  L        +L+F  WV       L   TH  
Sbjct: 64  YTILTIDRWESLNHMAYGLKQLRPVHGRL--------ALKFLKWVIKQPGLELKHLTHMY 115

Query: 146 VL--HILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLFKT 202
            L  HIL K R + S++SILR +       + SK +F +++ +Y +C+S P VFDLL + 
Sbjct: 116 CLTAHILVKARMYDSAKSILRHLC---QMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRV 172

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y        A +TF  +   GF P + +CN  L+S++  +R ++    ++EM    I PN
Sbjct: 173 YLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPN 232

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T N++++  C  G +++A  + K ME  GF+P++ TYNTL++ +C KG    A++  +
Sbjct: 233 VGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELID 292

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI+ +V T+N  I   C   +  +A  +  +M+   +SPN VTYNTLING+ + G
Sbjct: 293 YMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEG 352

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              + A ++ EM +  +  + +TYNALI G C  G  ++A  L+  ++   L  N     
Sbjct: 353 KIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE---- 408

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
                     N   A ++Y  M  +G   +     +L+S+ C++     A + L  M   
Sbjct: 409 --------HGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRI 460

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + P+SI    + +G    G    A   F  M   G  P  F
Sbjct: 461 GLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 502



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 164/372 (44%), Gaps = 24/372 (6%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y  + +++ A +    M   G    + + N F+ +L  + R   A    K+
Sbjct: 269 VTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKK 328

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR+  ISPN  T N +++ F K G I  A +VF  M      P+  TYN LI GHC+ G 
Sbjct: 329 MRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGD 388

Query: 314 LSLAMKFKNLMEKNGIQPNV-----------------------ITFNTLIFGFCKKGKLH 350
              A++  + ME  G++ N                         T N L+   C+ GKL 
Sbjct: 389 FEEALRLLDHMEAAGLRLNEHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLG 448

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA +    M    + PN +TY+ +INGYG +G+     S +++M++ G      TY +L+
Sbjct: 449 EAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLL 508

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK G   +A   +  L       ++  Y+ L+   C   N   A  L+  M+++   
Sbjct: 509 KGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVL 568

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVL-LEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           P+ + +  L++  C+      A  +    M    + P+ ++ + L  GL   G  + A  
Sbjct: 569 PDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFY 628

Query: 530 LFRKMEIRGLLP 541
            F +M  +G  P
Sbjct: 629 FFEEMMKKGTCP 640



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 12/309 (3%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  F++EM +    P+    N ++ +  + G + +A + F  M   G  P++ TYN L+ 
Sbjct: 626 AFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLH 685

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK------------LHEANR 354
           G   K  L   +   + M + GI P+ +TF++LI G  K G             + E+  
Sbjct: 686 GFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTV 745

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  EM    V P    Y TLING  +VG+ +    L +EM   G     +  +A++ GL 
Sbjct: 746 VLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLL 805

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
             GKT+ A  ++  + +  L+P  +T++ L+   C       A +L   M   G + +  
Sbjct: 806 HCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVV 865

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L+   C N D   A E+  EM  + + P+    + L   +          KL   +
Sbjct: 866 AYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 925

Query: 535 EIRGLLPKG 543
           + RGL+  G
Sbjct: 926 QERGLISWG 934



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 12/299 (4%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M   G  P   + N  + S     ++  A  F+  MR   + PN+ T N+++H F K
Sbjct: 630 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 689

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF--KNLMEK------- 326
              + R + ++  M   G  P   T+++LI G    G+  L +K   K +ME+       
Sbjct: 690 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEESTVVLHE 749

Query: 327 ---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
              NG+ P    + TLI G C+ G +  A ++  EM+A     + V  + ++ G    G 
Sbjct: 750 MLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGK 809

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           +E    + + MLR  +   I T+  L+   C++ K  +A  L   ++   L  +   Y+ 
Sbjct: 810 TEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNV 869

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           LI G C   +S  AF+LY+ M      PN   + +L+       +  +  ++L ++ E+
Sbjct: 870 LIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQER 928



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 17/400 (4%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  S+L+G+    +     K  + + Y     DS  ++++ L            A   
Sbjct: 501 FFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS--VMYNTLLAETCKSGNLHEAVAL 558

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG-FYKEMRRNRISPNVYTLNMVMHAFC 274
           F +M     LP   + +  L+ L    +   A+  F   M R  + PN      ++    
Sbjct: 559 FDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLS 618

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G  + A   F+ M   G  P    +N +I     +G +  A  F + M   G+ PN+ 
Sbjct: 619 KAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLA 678

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL---- 390
           T+N L+ GF KK  L     ++S M    + P+ +T+++LI G  + G  ++G  L    
Sbjct: 679 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKM 738

Query: 391 --------YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                     EML NG+      Y  LI G+C+ G  + A  L  +++      +    S
Sbjct: 739 IMEESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAES 798

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           A++ G      +E A  +   M+R    P    F  LM  FC++     A + L  ++E 
Sbjct: 799 AMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK-LKGVMEL 857

Query: 503 C-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C +  D +  + L  G+   G    A +L+ +M  R L P
Sbjct: 858 CGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCP 897


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/413 (29%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 129 WVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
           W+ +      T +++  + + L+ ++ F+  +SI+R ++     D  + +F +IL +   
Sbjct: 90  WLSSIPTFRHTSQSYCAMANFLSAHQMFQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
              S  VFD L   Y       +A   F  +R+  F      C   L  +++S       
Sbjct: 150 -RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIW 208

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            FY E+      P V   N++++ FCK G I  A  +F  +   G  P+  ++NTLI+G 
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L    + K  ME+N I P+V T++ LI G CK+G+L  A ++F EM+   + PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+  LI+G  +    +   + Y +ML  G+K D++ YN L+ GLCK G   KA  LV +
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+  TY+ LI G C   + E A ++ K M   G   +   F  L+S FC++  
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A   L EM+E  M PD    + +  G    G  ++  KL ++M+I G  P
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKP 501



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 178/337 (52%), Gaps = 4/337 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +      R+A   F ++R  G  P   S N  ++ L  S  +D      K M 
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            NRI P+V+T ++++H  CK G ++ A ++F  M+  G  P+  T+  LI G C    + 
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM   + M   G++P+++ +NTL+ G CK G +++A ++  EM+   + P+ +TY TLI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY + G+ E    + + M   G+ +D + + ALI G C++G+ + A   ++++ +  + 
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ +I G C + N +  F+L K M  +G +P    + +LM+  C+      A  +
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKL 530
           L  ML   + PD I  + L  G  HC  GK E  +KL
Sbjct: 526 LEAMLNLGVTPDDITYNILLEG--HCKNGKAEDLLKL 560



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 5/285 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      D+  +LFD +    R    + + F  L       ++  +A +T+ QM  
Sbjct: 299 LIHGLCKEGRLDVAEQLFDEM--QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLT 356

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P +   N  L+ L     V+ A     EMR   + P+  T   ++  +CK G +E 
Sbjct: 357 MGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLES 416

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+E+ K M   G +     +  LISG C  G +  A +    M + G++P+  T+  +I 
Sbjct: 417 AMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVID 476

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+CKKG +    ++  EM+     P V+TYN L+NG  + G  +    L E ML  G+  
Sbjct: 477 GYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTP 536

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           D +TYN L+ G CK G   KA  L+K  ++  L+ + + Y++L++
Sbjct: 537 DDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVS 578



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 99/207 (47%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +SE+      P V  YN LIN + + G+      ++ E+ + G++   +++N LI GLCK
Sbjct: 211 YSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCK 270

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
                +   L K +++N + P+  TYS LI G C     + A QL+  M + G RPN   
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F  L+   C++   D A     +ML   + PD ++ + L +GL   G    A KL  +M 
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390

Query: 536 IRGLLPKGFDKLRTINCAPENGEKESG 562
           + G+ P        I+   + G+ ES 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESA 417


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 245/519 (47%), Gaps = 25/519 (4%)

Query: 63  PIPIPHRTLPEPKGQDLDFVNIAYSHLIHS--DWKKLTALSTHLTPFRVKHVLLKVQKDY 120
           P P+P +   +P   D   +    S L +   D  +   L  HL+P +   V   V+++ 
Sbjct: 33  PSPLPSQN--QPPSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNV 90

Query: 121 --VLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
               +L FF +         TL ++ +++  L  +     +  +L  ++D     LP   
Sbjct: 91  NPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRK---LPVLF 147

Query: 179 FDS----ILYSYRMCDSSPL--------VFDLLFKTYAHRKK---FRNATDTFCQMRDYG 223
            D     I  +  M D + +          DLL   Y  + +   FRNA   F  + + G
Sbjct: 148 GDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG 207

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P +++C   LSSL+ +  ++ +   ++ MR+  +SP+VY  +  ++AFCK G +E A+
Sbjct: 208 VFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAI 266

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F +ME +G  P+V TYN LI G C  G L  A +FK  M K+G+   +IT++ LI G 
Sbjct: 267 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 326

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            K  K +EAN +  E      +PN V YNTLI+GY ++GN      +  +M+  GI  + 
Sbjct: 327 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +T N++I G CK G+ ++A  +++++       N   ++ +I   C+    E A +  + 
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+    RPN  +   L+   C+      A E+   +LEK    + +  + L  GL   G 
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + A++L +KM  RG +         I+   + G+ E G
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 545



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 152/295 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  +       N+ T N ++H  CK G ++ AV + K M   GF+    TYNTLIS
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G +    K +  M K GI+P+  T+N LI G C+ GKL EA  +++E K+ ++ P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +I+GY +    E G  L+ E+L   ++++ + YN LI   C+ G T +A  L 
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 654

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            D+    + P  +TYS+LI G C     E A  L   M + G  PN   +  L+  +C+ 
Sbjct: 655 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 714

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              D+   VL EM    + P+ I  + +  G    G  + A KL  +M  +G++P
Sbjct: 715 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVP 769



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 18/396 (4%)

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
           + ++H L  N +F+S+   LR +L               L + R  D    +   L    
Sbjct: 425 TTIIHWLCMNSRFESALRFLREML---------------LRNMRPNDG---LLTTLVGGL 466

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
               K  +A + + ++ + GF   + + N  +  L  +  +  A+   K+M       + 
Sbjct: 467 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 526

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T N ++   CK G +E   ++   M   G  P   TYN LI G C  G L  A+   N 
Sbjct: 527 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 586

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
            +   + PNV T+  +I G+CK  K+ E  ++F+E+   N+  N V YNTLI  Y + GN
Sbjct: 587 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           +     L+++M   GI     TY++LI G+C  G+ + A  L+ ++ K  L+PN   Y+A
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C     ++   + + M      PNK  + +++  + ++ D   AA++L EM+ K 
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           + PD++  + L +G    GK E   K+   M   GL
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 170/387 (43%), Gaps = 35/387 (9%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ + + +L       +KF  A     +  + GF P     N  +        +  AL 
Sbjct: 313 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 372

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-------------- 295
              +M    I+PN  TLN ++  FCK+G +E+A  + + M S GF               
Sbjct: 373 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 432

Query: 296 ---------------------PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                                P+     TL+ G C +G  S A++    + + G   N++
Sbjct: 433 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 492

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T N LI G CK G + EA R+  +M       + +TYNTLI+G  + G  E G  L  EM
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ GI+ D  TYN LI G+C+ GK  +A  L  +     LVPN  TY  +I G C     
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E   +L+  ++      N  ++  L+  +C+N +   A ++  +M  K + P +   S L
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G+ + G+ E A  L  +M   GLLP
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLP 699



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 104/219 (47%), Gaps = 2/219 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   +D  +   KLF  +L      +S  +V++ L + Y        A      MR 
Sbjct: 602 MIDGYCKADKIEEGEKLFTELLTQNLELNS--VVYNTLIRAYCRNGNTVEAFKLHDDMRS 659

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P   + +  +  + +  R++ A     EMR+  + PNV     ++  +CKLG +++
Sbjct: 660 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 719

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            V V + M S    P+  TY  +I G+   G +  A K  + M   GI P+ +T+N L  
Sbjct: 720 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 779

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           GFCK+GK+ E  +I   M    +  + +TY TL++G+ Q
Sbjct: 780 GFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQ 818


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 245/519 (47%), Gaps = 25/519 (4%)

Query: 63  PIPIPHRTLPEPKGQDLDFVNIAYSHLIHS--DWKKLTALSTHLTPFRVKHVLLKVQKDY 120
           P P+P +   +P   D   +    S L +   D  +   L  HL+P +   V   V+++ 
Sbjct: 100 PSPLPSQN--QPPSSDHALLKSVTSILSNPSLDSTQCKQLIPHLSPHQFDSVFFSVRRNV 157

Query: 121 --VLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
               +L FF +         TL ++ +++  L  +     +  +L  ++D     LP   
Sbjct: 158 NPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRK---LPVLF 214

Query: 179 FDS----ILYSYRMCDSSPL--------VFDLLFKTYAHRKK---FRNATDTFCQMRDYG 223
            D     I  +  M D + +          DLL   Y  + +   FRNA   F  + + G
Sbjct: 215 GDPKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKG 274

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P +++C   LSSL+ +  ++ +   ++ MR+  +SP+VY  +  ++AFCK G +E A+
Sbjct: 275 VFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGGKVEDAI 333

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F +ME +G  P+V TYN LI G C  G L  A +FK  M K+G+   +IT++ LI G 
Sbjct: 334 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 393

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            K  K +EAN +  E      +PN V YNTLI+GY ++GN      +  +M+  GI  + 
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +T N++I G CK G+ ++A  +++++       N   ++ +I   C+    E A +  + 
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+    RPN  +   L+   C+      A E+   +LEK    + +  + L  GL   G 
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + A++L +KM  RG +         I+   + G+ E G
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEG 612



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 159/318 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  +       N+ T N ++H  CK G ++ AV + K M   GF+    TYNTLIS
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G +    K +  M K GI+P+  T+N LI G C+ GKL EA  +++E K+ ++ P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +I+GY +    E G  L+ E+L   ++++ + YN LI   C+ G T +A  L 
Sbjct: 662 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 721

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            D+    + P  +TYS+LI G C     E A  L   M + G  PN   +  L+  +C+ 
Sbjct: 722 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 781

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              D+   VL EM    + P+ I  + +  G    G  + A KL  +M  +G++P     
Sbjct: 782 GQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTY 841

Query: 547 LRTINCAPENGEKESGGL 564
               N   + G+ E G L
Sbjct: 842 NVLTNGFCKEGKIEEGKL 859



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 179/382 (46%), Gaps = 18/382 (4%)

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
           + ++H L  N +F+S+   LR +L               L + R  D    +   L    
Sbjct: 492 TTIIHWLCMNSRFESALRFLREML---------------LRNMRPNDG---LLTTLVGGL 533

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
               K  +A + + ++ + GF   + + N  +  L  +  +  A+   K+M       + 
Sbjct: 534 CKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDK 593

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T N ++   CK G +E   ++   M   G  P   TYN LI G C  G L  A+   N 
Sbjct: 594 ITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNE 653

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
            +   + PNV T+  +I G+CK  K+ E  ++F+E+   N+  N V YNTLI  Y + GN
Sbjct: 654 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           +     L+++M   GI     TY++LI G+C  G+ + A  L+ ++ K  L+PN   Y+A
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 773

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C     ++   + + M      PNK  + +++  + ++ D   AA++L EM+ K 
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833

Query: 504 MAPDSIILSELYSGLHHCGKDE 525
           + PD++  + L +G    GK E
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIE 855



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 170/387 (43%), Gaps = 35/387 (9%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ + + +L       +KF  A     +  + GF P     N  +        +  AL 
Sbjct: 380 NATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALR 439

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-------------- 295
              +M    I+PN  TLN ++  FCK+G +E+A  + + M S GF               
Sbjct: 440 IRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLC 499

Query: 296 ---------------------PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                                P+     TL+ G C +G  S A++    + + G   N++
Sbjct: 500 MNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLV 559

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T N LI G CK G + EA R+  +M       + +TYNTLI+G  + G  E G  L  EM
Sbjct: 560 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 619

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ GI+ D  TYN LI G+C+ GK  +A  L  +     LVPN  TY  +I G C     
Sbjct: 620 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 679

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E   +L+  ++      N  ++  L+  +C+N +   A ++  +M  K + P +   S L
Sbjct: 680 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 739

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G+ + G+ E A  L  +M   GLLP
Sbjct: 740 IHGMCNIGRMEDAKCLIDEMRKEGLLP 766



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 118/233 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++LL        K   A + + + +    +P + +    +     +++++     + E+ 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  N    N ++ A+C+ G    A ++  +M S G  P+  TY++LI G CN G + 
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 750

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M K G+ PNV+ +  LI G+CK G++ +   +  EM + ++ PN +TY  +I
Sbjct: 751 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 810

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +GY + G+ +  A L  EM+  GI  D +TYN L  G CKEGK ++   L +D
Sbjct: 811 DGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 2/191 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   +D  +   KLF  +L      +S  +V++ L + Y        A      MR 
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNS--VVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P   + +  +  + +  R++ A     EMR+  + PNV     ++  +CKLG +++
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            V V + M S    P+  TY  +I G+   G +  A K  + M   GI P+ +T+N L  
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846

Query: 342 GFCKKGKLHEA 352
           GFCK+GK+ E 
Sbjct: 847 GFCKEGKIEEG 857


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 215/437 (49%), Gaps = 4/437 (0%)

Query: 106 PFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRG 165
           P  +  VL  V+   V++L FF W +       +  ++S++L IL +N   +S+  ++  
Sbjct: 47  PKLLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEK 106

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           ++   S  + + + D +  S     S  L+ DLL   Y  +         F +M   G L
Sbjct: 107 VV---SVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLL 163

Query: 226 PIIESCNKFLSSLLDSE-RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           P +++CN+ L  L D +  +D+A   Y  M    I P V T N ++ +FCK G+++ A++
Sbjct: 164 PDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQ 223

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +   M++MG  P+  TYN L++G  + G +  A +    M + G++ +V T++ LI G+C
Sbjct: 224 LLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYC 283

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           +KG++ EA+R+  EM +    P VVTYNT++ G  + G       L + M+   +  D++
Sbjct: 284 EKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLV 343

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           +YN LI G  + G   +A  L  +L   SL P+  TY+ LI G C   + + A +L   M
Sbjct: 344 SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I+ G  P+   F   +  FC+  +   A E+  EML + + PD         G    G  
Sbjct: 404 IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 463

Query: 525 ELAMKLFRKMEIRGLLP 541
             A  +  +M  RG  P
Sbjct: 464 SKAFGMQEEMLARGFPP 480



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 176/362 (48%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S   +D L + Y  + +   A+    +M   G +P + + N  +  L    RV  A  
Sbjct: 269 EVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARK 328

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M    + P++ + N +++ + +LG I  A  +F  +      PSV TYNTLI G C
Sbjct: 329 LLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLC 388

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L +AM+ K+ M K+G  P+V TF T + GFCK G L  A  +F EM    + P+  
Sbjct: 389 RLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRF 448

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y T I G  ++G+      + EEML  G   D++TYN  I GL K G  K+A+ LVK +
Sbjct: 449 AYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 508

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             N LVP+  TY+++I    +  +  +A  L+  M+  G  P+   + +L+ ++      
Sbjct: 509 LYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 568

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
             A     EM EK + P+ I  + L +GL    K + A   F +M+ +G+ P  +     
Sbjct: 569 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTIL 628

Query: 550 IN 551
           IN
Sbjct: 629 IN 630



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 214/425 (50%), Gaps = 11/425 (2%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR--KFKSSESILRGILDSDS-FDLPSKL 178
           L L+   W+   K  SL  +   +   +++K      K+   +LR + D D+  D+  ++
Sbjct: 132 LILDLLLWIYVKK--SLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREV 189

Query: 179 FDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++ ++     C   P V  ++ +  ++  +   + A     QM+  G  P   + N  ++
Sbjct: 190 YNVMVE----CGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVN 245

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L  S  ++ A    ++M R  +  +VYT + ++  +C+ G IE A  + + M S G +P
Sbjct: 246 GLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVP 305

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TYNT++ G C  G +S A K  ++M    + P+++++NTLI+G+ + G + EA  +F
Sbjct: 306 TVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLF 365

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +E++  +++P+VVTYNTLI+G  ++G+ ++   L +EM+++G   D+ T+   + G CK 
Sbjct: 366 AELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKM 425

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G    A  L  ++    L P+   Y   I G+    +  +AF + + M+  G  P+   +
Sbjct: 426 GNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITY 485

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            + +    +  +   A+E++ +ML   + PD +  + +       G    A  LF +M  
Sbjct: 486 NVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLS 545

Query: 537 RGLLP 541
           +G+ P
Sbjct: 546 KGIFP 550



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 107/208 (51%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P + + N F+  L     +  A    K+M  N + P+  T   ++HA    G
Sbjct: 472 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 531

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A  +F  M S G  PSV TY  LI  +  +G L LA+     M + G+ PNVIT+N
Sbjct: 532 HLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 591

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK  K+ +A   F+EM+A  +SPN  TY  LIN    +G+ +    LY++ML  
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 651

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYL 425
            I+ D  T+ +L+  L K+ K     +L
Sbjct: 652 EIQPDSCTHRSLLKHLNKDYKLHVVRHL 679



 Score = 68.6 bits (166), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 67/142 (47%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
            R A   F +M   G  P + +    + S     R+ +A+  + EM    + PNV T N 
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  CK+  +++A   F  M++ G  P+  TY  LI+ +CN G    A++    M    
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652

Query: 329 IQPNVITFNTLIFGFCKKGKLH 350
           IQP+  T  +L+    K  KLH
Sbjct: 653 IQPDSCTHRSLLKHLNKDYKLH 674


>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
 gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 227/463 (49%), Gaps = 28/463 (6%)

Query: 64  IPIPHRTLPEPKGQD---LDFVNIAYSHLIHSDWKKLTALSTH-----LTPFRVKHVLLK 115
           +P    T P P          +++   H   S W  L +L T      L P     + LK
Sbjct: 23  LPFSTTTSPPPNHHSPLTTAIISLLTHHRSKSRWSHLRSLLTTTTSTPLAPGHFSLITLK 82

Query: 116 VQKDYVLSLEFFTWVQTHKPS--SLTLETHSIVLHILTKNRKFKSSESILRGILDSDS-F 172
           ++ +  L+L FF +   H  S  S  L +++ ++HIL++ R    ++ I+R  L S   +
Sbjct: 83  LKSNPHLALSFFHFT-LHNSSLCSHNLRSYATIIHILSRARLKAHAQEIIRAGLRSQILY 141

Query: 173 DL--PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
            L    + F+ ++ SYR CDS+P VFDLL K+    KK   + +    +R  G  P I +
Sbjct: 142 HLLKEVRFFEVLVKSYRECDSAPFVFDLLIKSCLELKKIDGSIEIVKMLRSKGISPSIST 201

Query: 231 CNKFLSSLLDSERVDIALGFYKE------------MRRN-RISPNVYTLNMVMHAFCKLG 277
           CN  +S +   +   +  G +KE            MRR  R+ PNV++ N +M  F + G
Sbjct: 202 CNALISEVSRCKGSFVGYGVFKEVFGLESCELGEKMRRGFRVRPNVHSFNELMVGFYRNG 261

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E   E++  ME  G + +  +Y  LI+  C  G LS A +  + M   GI P+V+ +N
Sbjct: 262 EVEMVEEIWSEMERFGCVANGFSYGVLIAVFCEGGRLSEAERLWDEMRVKGIMPDVVAYN 321

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GFCK G++ +A  +F EM  + +  + VT+  LI GY ++G+      +Y++M R 
Sbjct: 322 TIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEGYCRIGDVNSAILVYKDMRRR 381

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSER 456
             +++ LT   LI GLC++ +  +A  +++   ++ S  PN  +Y  LI G C     E 
Sbjct: 382 DFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHPNGKSYELLINGLCEDGKMEE 441

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           A +L   M+  G  PN  I+   +  + +  + + AA +  EM
Sbjct: 442 ALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAMLRKEM 484


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 190/350 (54%), Gaps = 2/350 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L ++YA   +   A          G+ P + + N  L +L D+  +  A  F   M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDAS-LPSARRFLSSML 144

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ ++PNVYT N+++ A C  G +E AV V  +M   G  P+  TYNTL++  C  G L 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 316 LAMKFKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A +  +LM + G  +PN++TFN+++ G CK G++  A ++F EM    ++P+VV+YNTL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++GY +VG      +++ EM + G+  D++T+ +LI   CK G  ++A  LV  + +  L
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             N  T++ALI G C +   + A    + M + G +P+   +  L++ +C+    D A E
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++ EM  K + PD +  S + SG    G  + A +L +KM  +G+LP   
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 183/347 (52%), Gaps = 1/347 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIA 247
           C  + + ++ L   +    +   A      MR+ G   P + + N  ++ L  + R++ A
Sbjct: 183 CAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGA 242

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM R  ++P+V + N ++  +CK+G +  ++ VF  M   G +P V T+ +LI  
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G L  A+     M + G++ N +TF  LI GFCKKG L +A     EM+   + P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VV YN LINGY ++G  ++   L  EM    +K D++TY+ +I G CK G    A  L +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + K  ++P+A TYS+LI G C  K    A +L+++M++ G +P++  +  L+   C+  
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           + ++A  +  EM+ K + PD +  S L +GL    + + A +L  K+
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        +   A   F +M   G  P + S N  LS       +  +L  + E
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+V T   ++HA CK G +E+AV +   M   G   +  T+  LI G C KG 
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M K GIQP+V+ +N LI G+CK G++  A  +  EM+A  V P+VVTY+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +VGN +    L ++ML+ G+  D +TY++LI GLC+E +   A  L +++ +  
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ LI G C   N E+A  L+  MIR G  P+   + +L++   ++     A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKL 547
            +L ++  +   PD+I    L   +  C K E    + L +   ++GL+ K  DK+
Sbjct: 524 RLLFKLYHEDPVPDNIKYDAL---MLCCSKAEFKSVVALLKGFCMKGLM-KEADKV 575



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 179/349 (51%), Gaps = 5/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L +    R +   A      MR  G  P   + N  +++   +  +D A      MR
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214

Query: 256 R-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PN+ T N +++  CK G +E A +VF  M   G  P V +YNTL+SG+C  G L
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             ++   + M + G+ P+V+TF +LI   CK G L +A  + ++M+   +  N VT+  L
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + G  +      EEM + GI+  ++ YNALI G CK G+   A  L+++++   +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS +I+G C   N + AFQL + M++ G  P+   +  L+   C+ +  + A E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           +   ML+  + PD    + L  G  HC  G  E A+ L  +M  +G+LP
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDG--HCKEGNVEKALSLHDEMIRKGVLP 501



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 183/414 (44%), Gaps = 21/414 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +   +   K+FD ++      D   + ++ L   Y        +   F +M 
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDV--VSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    + +   +  ++ A+    +MR   +  N  T   ++  FCK G ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+   + M   G  PSV  YN LI+G+C  G + LA +    ME   ++P+V+T++T+I
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+CK G L  A ++  +M    V P+ +TY++LI G  +         L+E ML+ G++
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY  LI G CKEG  +KA  L  ++ +  ++P+  TYS LI G      ++ A +L
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 461 YKSMIRSGCRPNKHIFEMLM---------------STFCQNEDFDRAAEVLLEMLEKCMA 505
              +      P+   ++ LM                 FC       A +V   ML++   
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 506 PDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            D  + S L  G  HC  G    A+   ++M   G  P     +  +    E G
Sbjct: 586 LDGSVYSILIHG--HCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 637



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 146/377 (38%), Gaps = 88/377 (23%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +  +    +A     +MR  G  P +   N  ++      R+D+A    +E
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERA------------------------------- 282
           M   R+ P+V T + ++  +CK+G ++ A                               
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 283 ----VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                E+F+NM  +G  P   TY TLI GHC +G +  A+   + M + G+ P+V+T++ 
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 339 LI--------------------------------------------------FGFCKKGK 348
           LI                                                   GFC KG 
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA++++  M   N   +   Y+ LI+G+ + GN     S +++MLR+G   +  +  +
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GL +EG   +A   ++DL     + +A    ALI     RK     FQ    +  S 
Sbjct: 629 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLN--RKEGMDYFQAQGEIWYSE 686

Query: 469 CRPNKHIFEMLMSTFCQ 485
             P+   +  +M T C 
Sbjct: 687 SSPSVEYWNYMM-TICH 702


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 190/350 (54%), Gaps = 2/350 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FD L ++YA   +   A          G+ P + + N  L +L D+  +  A  F   M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALSDAS-LPSARRFLSSML 144

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ ++PNVYT N+++ A C  G +E AV V  +M   G  P+  TYNTL++  C  G L 
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 316 LAMKFKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A +  +LM + G  +PN++TFN+++ G CK G++  A ++F EM    ++P+VV+YNTL
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++GY +VG      +++ EM + G+  D++T+ +LI   CK G  ++A  LV  + +  L
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             N  T++ALI G C +   + A    + M + G +P+   +  L++ +C+    D A E
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++ EM  K + PD +  S + SG    G  + A +L +KM  +G+LP   
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 183/347 (52%), Gaps = 1/347 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIA 247
           C  + + ++ L   +    +   A      MR+ G   P + + N  ++ L  + R++ A
Sbjct: 183 CAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGA 242

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM R  ++P+V + N ++  +CK+G +  ++ VF  M   G +P V T+ +LI  
Sbjct: 243 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 302

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G L  A+     M + G++ N +TF  LI GFCKKG L +A     EM+   + P+
Sbjct: 303 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 362

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VV YN LINGY ++G  ++   L  EM    +K D++TY+ +I G CK G    A  L +
Sbjct: 363 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 422

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + K  ++P+A TYS+LI G C  K    A +L+++M++ G +P++  +  L+   C+  
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           + ++A  +  EM+ K + PD +  S L +GL    + + A +L  K+
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 179/349 (51%), Gaps = 5/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L +    R +   A      MR  G  P   + N  +++   +  +D A      MR
Sbjct: 155 YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 214

Query: 256 R-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PN+ T N +++  CK G +E A +VF  M   G  P V +YNTL+SG+C  G L
Sbjct: 215 EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 274

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             ++   + M + G+ P+V+TF +LI   CK G L +A  + ++M+   +  N VT+  L
Sbjct: 275 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 334

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + G  +      EEM + GI+  ++ YNALI G CK G+   A  L+++++   +
Sbjct: 335 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 394

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS +I+G C   N + AFQL + M++ G  P+   +  L+   C+ +  + A E
Sbjct: 395 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 454

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           +   ML+  + PD    + L  G  HC  G  E A+ L  +M  +G+LP
Sbjct: 455 LFENMLQLGVQPDEFTYTTLIDG--HCKEGNVEKALSLHDEMIRKGVLP 501



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        +   A   F +M   G  P + S N  LS       +  +L  + E
Sbjct: 224 VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 283

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+V T   ++HA CK G +E+AV +   M   G   +  T+  LI G C KG 
Sbjct: 284 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 343

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M K GIQP+V+ +N LI G+CK G++  A  +  EM+A  V P+VVTY+T
Sbjct: 344 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 403

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +VGN +    L ++ML+ G+  D +TY++LI GLC+E +   A  L +++ +  
Sbjct: 404 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ LI G C   N E+A  L+  MIR G  P+   + +L++   ++     A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKL 547
            +L ++  +   PD+I    L   +  C K E    + L +   ++GL+ K  DK+
Sbjct: 524 RLLFKLYHEDPVPDNIKYDAL---MLCCSKAEFKSVVALLKGFCMKGLM-KEADKV 575



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/408 (25%), Positives = 183/408 (44%), Gaps = 52/408 (12%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +   +   K+FD ++      D   + ++ L   Y        +   F +M 
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDV--VSYNTLLSGYCKVGCLHESLAVFSEMT 285

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    + +   +  ++ A+    +MR   +  N  T   ++  FCK G ++
Sbjct: 286 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 345

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+   + M   G  PSV  YN LI+G+C  G + LA +    ME   ++P+V+T++T+I
Sbjct: 346 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 405

Query: 341 FGFCKKG-----------------------------------KLHEANRIFSEMKATNVS 365
            G+CK G                                   +L++A  +F  M    V 
Sbjct: 406 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 465

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+  TY TLI+G+ + GN E   SL++EM+R G+  D++TY+ LI GL K  +TK+A  L
Sbjct: 466 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 525

Query: 426 VKDLDKNSLVPNASTYS---------------ALITGQCVRKNSERAFQLYKSMIRSGCR 470
           +  L     VP+   Y                AL+ G C++   + A ++Y+SM+    +
Sbjct: 526 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 585

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            +  ++ +L+   C+  +  +A     +ML    +P+S     L  GL
Sbjct: 586 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 141/364 (38%), Gaps = 85/364 (23%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +  +    +A     +MR  G  P +   N  ++      R+D+A    +E
Sbjct: 329 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 388

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERA------------------------------- 282
           M   R+ P+V T + ++  +CK+G ++ A                               
Sbjct: 389 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 448

Query: 283 ----VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                E+F+NM  +G  P   TY TLI GHC +G +  A+   + M + G+ P+V+T++ 
Sbjct: 449 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 508

Query: 339 LI--------------------------------------------------FGFCKKGK 348
           LI                                                   GFC KG 
Sbjct: 509 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 568

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA++++  M   N   +   Y+ LI+G+ + GN     S +++MLR+G   +  +  +
Sbjct: 569 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 628

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GL +EG   +A   ++DL     + +A    ALI       N +    +   M R G
Sbjct: 629 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDG 688

Query: 469 CRPN 472
             P+
Sbjct: 689 LLPS 692



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/273 (19%), Positives = 110/273 (40%), Gaps = 52/273 (19%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP   + +  +  L + +R++ A   ++ M +  + P+ +T   ++   CK G
Sbjct: 423 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 482

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISG------------------------------ 307
            +E+A+ +   M   G +P V TY+ LI+G                              
Sbjct: 483 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 542

Query: 308 --------------------HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKK 346
                                C KGL+  A K +++++++N  + +   ++ LI G C+ 
Sbjct: 543 ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN-WKLDGSVYSILIHGHCRG 601

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G + +A     +M  +  SPN  +  +L+ G  + G      +  +++L      D    
Sbjct: 602 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS 661

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            ALI    KEG       ++  + ++ L+P++ 
Sbjct: 662 KALIDLNRKEGNVDALIDVLCGMARDGLLPSSG 694


>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 33/457 (7%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           LS +L P  +   ++K   D +L L+FF + +TH                L+ N  F + 
Sbjct: 70  LSRNLNP-SIAFEVIKRFSDPLLGLKFFEFSRTH----------------LSINHTFNTY 112

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           + ++R +      D    +FD +     + DSS  + +LL  +YA   K  +A +   ++
Sbjct: 113 DLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSS--ILELLVSSYARMGKLDSAKNFLNEV 170

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
             YG        N  L+ L+    VD A+  ++E       P+VY+ N+++   C++G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNT 338
           ++A E F+NM + G  P + +YNTLI+G C    +S      K  M   G+ P+VIT+ +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I G+CK G +  A+ +F EM ++ + PN  T+N LI+G+G+VGN      +YE+ML  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++T+ +LI G C+EG+  +   L +++   +L PN  TY+ LI   C       A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              + +  S   P   I+  ++  FC+    D A  ++ EM EK   PD I  + L  G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG- 469

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
            +C K  +   +             F K+  INC P+
Sbjct: 470 -NCMKGRMVEAI-----------STFYKMIEINCVPD 494


>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Cucumis sativus]
          Length = 548

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 221/457 (48%), Gaps = 33/457 (7%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           LS +L P  +   ++K   D +L L+FF + +TH                L+ N  F + 
Sbjct: 70  LSRNLNP-SIAFEVIKRFSDPLLGLKFFEFSRTH----------------LSINHTFNTY 112

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           + ++R +      D    +FD +     + DSS  + +LL  +YA   K  +A +   ++
Sbjct: 113 DLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSS--ILELLVSSYARMGKLDSAKNFLNEV 170

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
             YG        N  L+ L+    VD A+  ++E       P+VY+ N+++   C++G I
Sbjct: 171 HCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEI 230

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNT 338
           ++A E F+NM + G  P + +YNTLI+G C    +S      K  M   G+ P+VIT+ +
Sbjct: 231 DKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTS 290

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I G+CK G +  A+ +F EM ++ + PN  T+N LI+G+G+VGN      +YE+ML  G
Sbjct: 291 IISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLG 350

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++T+ +LI G C+EG+  +   L +++   +L PN  TY+ LI   C       A 
Sbjct: 351 CLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKENRIREAR 410

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              + +  S   P   I+  ++  FC+    D A  ++ EM EK   PD I  + L  G 
Sbjct: 411 NFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIG- 469

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
            +C K  +   +             F K+  INC P+
Sbjct: 470 -NCMKGRMVEAI-----------STFYKMIEINCVPD 494


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/469 (29%), Positives = 230/469 (49%), Gaps = 16/469 (3%)

Query: 87  SHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLE----FFTWVQTHKPSSLTLET 142
           S L   +W+ L   S          V L ++++ V+  +    FF WV +    S  L T
Sbjct: 50  SLLKQKNWQFLIESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLST 109

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-----FD 197
            SI+  IL  +  F ++ ++L  ++D+ +  +  K+ DSI+  Y+  + S        F+
Sbjct: 110 FSILSLILCNSGLFGNAANVLERMIDTRNPHV--KILDSIIKCYKEINGSSSSSSVVVFE 167

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   Y  +     A   F   +   F+  +  CN     LL   RV++    YK M   
Sbjct: 168 ILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML-G 226

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+VYT   +++A+C++G +E    V  +ME  G IP++ TY+ +I+G C  G +  A
Sbjct: 227 AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEA 286

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M   G+ P+   + TLI GFC++ +  E   +  EM    + P+ V Y  LING
Sbjct: 287 LELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALING 346

Query: 378 YGQVGNSEMGASLY--EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  V  S++G +    EEM    IK++  TY ALI GLCK G  +KA  L  ++    + 
Sbjct: 347 F--VKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI G    +N E+A++L   + +     N ++   +++  C   D  RA E+
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             EM+   + P+ +I + +  GL   G+ E A+K+   M+ +GL P  F
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 178/385 (46%), Gaps = 37/385 (9%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D F +M   G  P I++ N  +      + ++ A     E+++  ++ N Y    +++
Sbjct: 391 AEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVN 450

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G + RA E+F+ M S G  P++  Y T++ G   +G    A+K   +M+  G+ P
Sbjct: 451 GLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSP 510

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V  +NT+I GFCK GK+ E      EM A  + PNV TY   I+GY + G  +     +
Sbjct: 511 DVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSF 570

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKA-------------------AYLVKDLDKN 432
            EML +GI  + +    LI G CK+G T KA                   + L+  L KN
Sbjct: 571 IEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKN 630

Query: 433 ----------------SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
                            LVP+  TY++LI+  C   + + AF+L+  M + G  PN   +
Sbjct: 631 GKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTY 690

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L++  C+  +  +A E+   + EK +A +S+  S + +G         A +LF  M++
Sbjct: 691 NALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKL 750

Query: 537 RGLLPKGFDKLRTIN--CAPENGEK 559
            G+ P  F     I+  C   N EK
Sbjct: 751 VGVPPDSFVYCALIDGCCKAGNTEK 775



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 184/375 (49%), Gaps = 5/375 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+         ++LF  ++ S+ +   + +++  + K      +F  A      M+
Sbjct: 447 AIVNGLCHCGDLTRANELFQEMI-SWGL-KPNIVIYTTIVKGLVKEGRFEEAIKILGVMK 504

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P +   N  +     + +++    +  EM    + PNVYT    +H +C+ G ++
Sbjct: 505 DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQ 564

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM-KFKNLMEKNGIQPNVITFNTL 339
            A   F  M   G  P+      LI G+C  G  + A  KF+ ++++ G+ P+V T + L
Sbjct: 565 AAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ-GVLPDVQTHSVL 623

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G  K GKL EA  +FSE+    + P+V TY +LI+   + G+ +    L+++M + GI
Sbjct: 624 IHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI 683

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +I+TYNALI GLCK G+  KA  L   + +  L  N+ TYS +I G C   N   AFQ
Sbjct: 684 NPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQ 743

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+  M   G  P+  ++  L+   C+  + ++A  + L M+E+ +A  +   + L  G  
Sbjct: 744 LFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAS-TPAFNALIDGFF 802

Query: 520 HCGKDELAMKLFRKM 534
             GK   A +L   M
Sbjct: 803 KLGKLIEAYQLVEDM 817



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 155/335 (46%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H      A + F +M  +G  P I      +  L+   R + A+     M+   +SP+V+
Sbjct: 454 HCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVF 513

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             N V+  FCK G +E        M + G  P+V TY   I G+C  G +  A +    M
Sbjct: 514 CYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
             +GI PN +    LI G+CK G   +A   F  M    V P+V T++ LI+G  + G  
Sbjct: 574 LDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKL 633

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    ++ E+L  G+  D+ TY +LI  LCKEG  K A  L  D+ K  + PN  TY+AL
Sbjct: 634 QEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNAL 693

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C      +A +L+  +   G   N   +  +++ +C++ +   A ++   M    +
Sbjct: 694 INGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGV 753

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            PDS +   L  G    G  E A+ LF  M   G+
Sbjct: 754 PPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 165/351 (47%), Gaps = 2/351 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++  L   +  +K+         +M   G  P   +    ++  +    +  A    +EM
Sbjct: 304 IYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM 363

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              +I  N +T   ++H  CK+G +E+A ++F  M  MG  P + TYN LI G+     +
Sbjct: 364 FARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNM 423

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +    ++K  +  N      ++ G C  G L  AN +F EM +  + PN+V Y T+
Sbjct: 424 EKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTI 483

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNS 433
           + G  + G  E    +   M   G+  D+  YN +I+G CK GK ++  +YLV+ + K  
Sbjct: 484 VKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAK-G 542

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  TY A I G C     + A + +  M+ SG  PN  I   L+  +C++ +  +A 
Sbjct: 543 LKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAF 602

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                ML++ + PD    S L  GL   GK + AM +F ++  +GL+P  F
Sbjct: 603 AKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 162/339 (47%), Gaps = 1/339 (0%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y    + + A  +F +M D G  P    C   +           A   ++ M    + P+
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T ++++H   K G ++ A+ VF  +   G +P V TY +LIS  C +G L  A +  +
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M K GI PN++T+N LI G CK G++ +A  +F  +    ++ N VTY+T+I GY +  
Sbjct: 677 DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA 736

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N      L+  M   G+  D   Y ALI G CK G T+KA  L   + +   + +   ++
Sbjct: 737 NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFN 795

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ALI G         A+QL + M+ +   PN   + +L+   C   +   A ++ +EM ++
Sbjct: 796 ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + P+ +  + L  G +  G+      LF +M  RG+ P
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKP 894



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 37/329 (11%)

Query: 211 NATDTFCQMR---DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           N T  F + R   D G LP +++ +  +  L  + ++  A+G + E+    + P+V+T  
Sbjct: 597 NTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYT 656

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G ++ A E+  +M   G  P++ TYN LI+G C  G ++ A +  + + + 
Sbjct: 657 SLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEK 716

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T++T+I G+CK   L EA ++F  MK   V P+   Y  LI+G  + GN+E  
Sbjct: 717 GLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKA 776

Query: 388 ASLY----------------------------------EEMLRNGIKVDILTYNALILGL 413
            SL+                                  E+M+ N I  + +TY  LI   
Sbjct: 777 LSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYH 836

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G  K+A  L  ++ K +++PN  TY++L+ G          F L+  M+  G +P+ 
Sbjct: 837 CTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDD 896

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             + +++    +  ++ +A +++ +ML +
Sbjct: 897 LAWSVMVDAHLKEGNWIKALKLVDDMLSE 925



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 166/378 (43%), Gaps = 18/378 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPS---------KLFDSILYSY 186
           ++THS+++H L+KN K + +  +   +LD     D F   S          L  +     
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676

Query: 187 RMC----DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
            MC    + + + ++ L        +   A + F  + + G      + +  ++    S 
Sbjct: 677 DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA 736

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +  A   +  M+   + P+ +    ++   CK G  E+A+ +F  M   G I S   +N
Sbjct: 737 NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFN 795

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI G    G L  A +    M  N I PN +T+  LI   C  G + EA ++F EM+  
Sbjct: 796 ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           NV PNV+TY +L++GY ++G      SL++EM+  GIK D L ++ ++    KEG   KA
Sbjct: 856 NVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKA 915

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             LV D+    +    + Y+ LI   C   N     ++   + + G + +      L+  
Sbjct: 916 LKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCC 975

Query: 483 FCQNEDFDRAAEVLLEML 500
           F +    D A  VL  M+
Sbjct: 976 FHRAGRTDEALRVLESMV 993



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    ++M  N I+PN  T  +++   C +G I+ A ++F  M+    +P+V TY +L+ 
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLH 869

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM--KATNV 364
           G+   G  S      + M   GI+P+ + ++ ++    K+G   +A ++  +M  +  NV
Sbjct: 870 GYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNV 929

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N+  Y  LI+   +  N      + +E+ + G K+ + T   L+    + G+T +A  
Sbjct: 930 CKNL--YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALR 987

Query: 425 LVKDLDKNSL 434
           +++ + ++ L
Sbjct: 988 VLESMVRSFL 997


>gi|297844018|ref|XP_002889890.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335732|gb|EFH66149.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 223/470 (47%), Gaps = 10/470 (2%)

Query: 72  PEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV- 130
           PEP  +D+ F  +   +L    W  L   S+ LT   +  VL + +    L+LEF+ WV 
Sbjct: 26  PEP--EDILFSALCL-NLKQRRWNTLHQFSSSLTNPLISRVLRQFRSSPKLALEFYNWVL 82

Query: 131 --QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL-PSKLFDSILYSYR 187
              T   S    E   +++H+L   R+F  + SI+  ++  +   L P  +   ++ SY+
Sbjct: 83  ENNTVAKSENRFEASCVMIHLLVDWRRFDDALSIMVNLMSVEGEKLSPLHVLSGLIRSYQ 142

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
            C SS  VFD L +        + A +   Q R  GF   + + N F+  LL+   +D  
Sbjct: 143 ACGSSLDVFDSLVRACTQNGDAQGAYEVIEQTRTEGFWVSVHALNNFMGCLLNLNEIDWF 202

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              YKEM       NV T N+V+++FCK   +  A+ VF  M   G  P+V ++N +I G
Sbjct: 203 WMVYKEMDSLGYVENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVVSFNMMIDG 262

Query: 308 HCNKGLLSLAMKF---KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
            C  G +  A++      +M  N + PN +T+N++I GFCK G+L  A RI  EM    V
Sbjct: 263 ACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGEMVKLGV 322

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N  TY  L++ YG+ G+S+    L +EM   G+  + + YN+++  L  EG T+ A  
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFMEGDTEGAMM 382

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           +++D+ +  +  +  T + ++ G C       A + ++ +       +      LM  F 
Sbjct: 383 VLRDMVRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCHNTLMHHFV 442

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +++      ++L  ML   +  D+I+   L  G    GK E A+ ++  M
Sbjct: 443 RDKKLVCVDQILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGM 492



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 127/244 (52%), Gaps = 6/244 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ F++++   ++  ++   N +MH F +   +    ++  +M   G       + TLI 
Sbjct: 415 AVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVHGLGLDTILFGTLID 474

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+  +G L  A+   + M K    PN++ +N+++ G  K+G    A  + + M+    S 
Sbjct: 475 GYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAAEAVVNAME----SK 530

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLR-NGIK-VDILTYNALILGLCKEGKTKKAAY 424
           + VTYNTL+NG  ++GN E   ++   M + +G K V ++TYN LI  LCK G  +KA  
Sbjct: 531 DTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAKE 590

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           ++K + +  +VP++ TY  LIT     +  E   +L+  MI  G  P++HI++ ++    
Sbjct: 591 VLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVTPHEHIYQSIVRPLL 650

Query: 485 QNED 488
             E+
Sbjct: 651 DGEN 654



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 149/348 (42%), Gaps = 8/348 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   +   DL  ++   ++     C+     +  L   Y        A     +M 
Sbjct: 296 SVINGFCKAGRLDLAERIRGEMVKLGVDCNERT--YGALVDAYGRAGSSDEALRLCDEMT 353

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +      N  +  L      + A+   ++M R R+  + +T  +V+   C+ G + 
Sbjct: 354 SKGLVANTVIYNSIVYWLFMEGDTEGAMMVLRDMVRKRMQIDGFTRAIVVRGLCRNGYVA 413

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AVE  + +     +  +  +NTL+        L    +    M  +G+  + I F TLI
Sbjct: 414 EAVEFHRQISEKKLVEDIVCHNTLMHHFVRDKKLVCVDQILGSMLVHGLGLDTILFGTLI 473

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+ K+GKL  A  I+  M   N +PN+V YN+++NG  + G +    ++   M      
Sbjct: 474 DGYLKEGKLERAIDIYDGMIKMNKTPNLVIYNSIVNGLSKRGMAGAAEAVVNAMESK--- 530

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS--TYSALITGQCVRKNSERAF 458
            D +TYN L+ G  K G  ++A  ++  + K     + S  TY+ LI   C     E+A 
Sbjct: 531 -DTVTYNTLLNGSLKIGNVEEADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAK 589

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           ++ K M+  G  P+   +  L+++F +N   +   E+   M+ + + P
Sbjct: 590 EVLKIMVERGVVPDSITYGTLITSFSKNRGQEEVVELHDYMILQGVTP 637



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/447 (21%), Positives = 175/447 (39%), Gaps = 84/447 (18%)

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D F +  K  DS+ Y       +   F+L+  ++    K   A   F +M   G  P + 
Sbjct: 200 DWFWMVYKEMDSLGYV-----ENVNTFNLVIYSFCKENKLFEALSVFYRMLKCGIWPNVV 254

Query: 230 SCNKFLSSLLDSERVDIAL---GFYKEMRRNRISPNVYTLNMVMHAFCKLG---IIER-- 281
           S N  +     +  +  AL   G    M  N +SPN  T N V++ FCK G   + ER  
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGVMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314

Query: 282 ------------------------------AVEVFKNMESMGFIPSVTTYNTLI------ 305
                                         A+ +   M S G + +   YN+++      
Sbjct: 315 GEMVKLGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVANTVIYNSIVYWLFME 374

Query: 306 -----------------------------SGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
                                         G C  G ++ A++F   + +  +  +++  
Sbjct: 375 GDTEGAMMVLRDMVRKRMQIDGFTRAIVVRGLCRNGYVAEAVEFHRQISEKKLVEDIVCH 434

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTL+  F +  KL   ++I   M    +  + + + TLI+GY + G  E    +Y+ M++
Sbjct: 435 NTLMHHFVRDKKLVCVDQILGSMLVHGLGLDTILFGTLIDGYLKEGKLERAIDIYDGMIK 494

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                +++ YN+++ GL K G    A  +V  ++    V    TY+ L+ G     N E 
Sbjct: 495 MNKTPNLVIYNSIVNGLSKRGMAGAAEAVVNAMESKDTV----TYNTLLNGSLKIGNVEE 550

Query: 457 AFQLYKSMIRSGCRPNKHI--FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           A  +   M +     +  +  + +L++  C+   +++A EVL  M+E+ + PDSI    L
Sbjct: 551 ADNILSRMQKQDGEKSVSLVTYNILINHLCKFGCYEKAKEVLKIMVERGVVPDSITYGTL 610

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +        E  ++L   M ++G+ P
Sbjct: 611 ITSFSKNRGQEEVVELHDYMILQGVTP 637


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 213/406 (52%), Gaps = 3/406 (0%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL 194
           P   +L  H+ +LHIL   R+F ++ ++L  +L + S  +   LF  ++  Y+    S  
Sbjct: 38  PCRPSLLAHAQLLHILAHARRFPAARALLASLLSAHS--VAPTLFPDLVEVYKDFSFSAA 95

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            FDLL + +A   + ++A   F +M   G    + SCN+ L+ L+ +  +  A+  +++M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R     P+ +T+ ++  A+C+ G +  A +  K ME MG   ++  Y+ ++ G+C  G  
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN-VSPNVVTYNT 373
            +A K  + ++  G+ PNV+T+  L+ G+CK+G++ EA ++  E+K    +  + V Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LINGY Q G  E    + +EM+  G++V++  YN +I G CK G+  +   L++  +   
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +  +Y+ L+ G C +    +AF+    M+R+G       +  L++ FC     D A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           ++   ML++ + P+ I  S L  G    GK E A+ L+++   RGL
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGL 441



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 203/447 (45%), Gaps = 37/447 (8%)

Query: 126 FFTWVQTHKPSSLTLET--HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FF   +T +  +L  ET    +  +++T N       +++ G+  +       +LF  + 
Sbjct: 420 FFKAGKTEQALNLWKETLARGLARNVVTIN-------TVINGLCKNRRMTEAEELFHRMK 472

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                CDS  L +  L   Y        AT    +M + GF+P +E  N F++ L  +++
Sbjct: 473 EWSCPCDS--LTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQ 530

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
                    EM    +SPN  T   ++  +CK G +  A  ++  M   G  P++   + 
Sbjct: 531 SGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSV 590

Query: 304 LISGHCNKGLLSLA-MKFKNLMEKNGIQP------NV-------------------ITFN 337
           L+S    +G +  A +  + L + + IQ       N+                   I +N
Sbjct: 591 LVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWN 650

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G CK G++ +A  +F ++K     P+  TY++LI+G    G+ ++   L +EML  
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  +I+TYN+LI GLCK     +A  L   L    + PNA TY+ LI G C   N+  A
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F+L + MI+ G +P    + +L+   C     + A ++L +M+E  + P+ I    L  G
Sbjct: 771 FKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQG 830

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
              CG  +   KL+ +M I GLLP  +
Sbjct: 831 YARCGNMKAITKLYNEMHICGLLPANW 857



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 160/341 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y  R +  +A     +M D G    +   N  ++      R+       + 
Sbjct: 271 VAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQA 330

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                ++ + Y+ N ++  +C+ G + +A E    M   GF  +  TYNTL++G C++G 
Sbjct: 331 NEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGA 390

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K   LM K G+ PN I+ +TL+ GF K GK  +A  ++ E  A  ++ NVVT NT
Sbjct: 391 IDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINT 450

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  +         L+  M       D LTY  LI G CK G   +A  +  +++   
Sbjct: 451 VINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLG 510

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            VP+   +++ ITG  + K S +   +   M   G  PN   +  L++ +C+  +   A 
Sbjct: 511 FVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDAC 570

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  EM+EK + P+  I S L S  +  GK + A  + +K+
Sbjct: 571 ILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKL 611



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 189/386 (48%), Gaps = 3/386 (0%)

Query: 182 ILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE-SCNKFLSSL 238
           +L+S ++   SP  + + LL K Y    +   A     ++++   + I E +    ++  
Sbjct: 221 LLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGY 280

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               R++ A     EM    +  N++  N +++ +CKLG +    ++ +  E  G     
Sbjct: 281 CQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDE 340

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            +YNTL+ G+C KG ++ A +  ++M +NG     +T+NTL+ GFC +G + +A +++  
Sbjct: 341 YSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFL 400

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    V PN ++ +TL++G+ + G +E   +L++E L  G+  +++T N +I GLCK  +
Sbjct: 401 MLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRR 460

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  L   + + S   ++ TY  LI G C   +  RA Q+   M   G  P+  +F  
Sbjct: 461 MTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNS 520

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            ++     +   +  ++ +EM  K ++P+++    L +G    G    A  L+ +M  +G
Sbjct: 521 FITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKG 580

Query: 539 LLPKGFDKLRTINCAPENGEKESGGL 564
           L P  F     ++C    G+ +   L
Sbjct: 581 LKPNLFICSVLVSCFYREGKVDEANL 606


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 220/458 (48%), Gaps = 12/458 (2%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSL------EFFTWVQTHKPSSLTLETHSI 145
           S +   +++   L    V+HV+  + ++  LSL       FF ++ +      T+ET+ +
Sbjct: 65  SSFAACSSIRNVLPSLSVRHVVDLINRN-PLSLPHRSIFAFFKFISSQPEFRFTVETYFV 123

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI--LYSYRMCDSSPLVFDLLFKTY 203
           +   L  +  F  ++S++  ++     +  S +F S+  +    MCD    + D L  TY
Sbjct: 124 MARFLAIHEMFVEAQSLIELVVSRKGKNSASSVFISLVEMRGTPMCD---FLVDALMITY 180

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
                  +    F   R + F+  I  C   L  ++         GFY E+       NV
Sbjct: 181 MDLGFIPDVIQCFRLSRKHNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNV 240

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           Y  N++M+ FCK G I  A +VF  +      P+V ++NTLI+G+C  G L +  + K+ 
Sbjct: 241 YVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHH 300

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           MEK+  +P+V T++ LI   CK+ K+  A+R+F EM    + PN V + TLI+G+ + G 
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQ 360

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            ++    Y++ML  G++ DI+ YN L+ G CK G    A  +V  + +  L P+  TY+ 
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTT 420

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C   + + A ++ K M ++G   ++  F  L+   C+      A   L EML   
Sbjct: 421 LIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M PD +  + +       G  +   KL ++M+  G +P
Sbjct: 481 MKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIP 518



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 165/325 (50%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   +       +A   F ++      P + S N  ++       +D+       M
Sbjct: 242 VFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHM 301

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            ++R  P+V+T + +++A CK   ++ A  +F  M   G IP+   + TLI GH   G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQI 361

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L  +    M   G+QP+++ +NTL+ GFCK G L  A  I   M    + P+ VTY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTL 421

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + G+ +    + +EM +NGI++D + ++ALI G+CKEG+   A   ++++ +  +
Sbjct: 422 IDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGM 481

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+ ++   C + +++  F+L K M   G  PN   + +L++  C+      A  
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADM 541

Query: 495 VLLEMLEKCMAPDSIILSELYSGLH 519
           +L  ML   + PD I  + L  G H
Sbjct: 542 LLDAMLNVGVVPDDITYNTLLEGHH 566



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 133/264 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L        K   A   F +M + G +P        +     + ++D+    Y++M 
Sbjct: 313 YSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKML 372

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++   N +++ FCK G +  A  +   M   G  P   TY TLI G C  G + 
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVD 432

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++ +  M++NGI+ + + F+ LI G CK+G++ +A R   EM    + P+ VTY  ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMM 492

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G+++ G  L +EM  +G   +++TYN L+ GLCK G+ K A  L+  +    +V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVV 552

Query: 436 PNASTYSALITGQCVRKNSERAFQ 459
           P+  TY+ L+ G     N+ + ++
Sbjct: 553 PDDITYNTLLEGHHRHANASKHYK 576



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 123/264 (46%), Gaps = 7/264 (2%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATD----TFCQMRDYGFLPIIESCNKFLSSLLDS 241
           Y MC+   +  D++F T  H        D    ++ +M   G  P I   N  ++    +
Sbjct: 334 YEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN 393

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +  A      M R  + P+  T   ++  FC+ G ++ A+E+ K M+  G       +
Sbjct: 394 GDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGF 453

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           + LI G C +G +  A +    M + G++P+ +T+  ++  FCKKG      ++  EM++
Sbjct: 454 SALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS 513

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               PNVVTYN L+NG  ++G  +    L + ML  G+  D +TYN L+ G  +     K
Sbjct: 514 DGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASK 573

Query: 422 AAYLVKDLDKNSLVPNASTYSALI 445
                K   +  +V + ++Y +L+
Sbjct: 574 H---YKQKPEIGIVADLASYKSLV 594


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 185/357 (51%), Gaps = 3/357 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   F ++ K++  + K R+    F QM D G  P     N  +       RVD 
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   Y+EM    + P++YT N +++AFCK   ++ A+E+FK M   GF P V TY+T+IS
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 307 GHCNKGLL--SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           G C  G +  +L M F  ++E+ G   N + +N LI G CK   +  A ++  EM +   
Sbjct: 122 GLCKTGKVTEALEMLFHKMIER-GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ +TYNT+++G  ++G        ++ M   G   D++ YN L+  L KEGKT +A  
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L KD+     +P+  TY++++ G   + N + A +++K M+ SGC PN   + +++S  C
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  D A +VL EM +    PD +  + L  GL      + A +LF  M   G  P
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 357



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 183/354 (51%), Gaps = 3/354 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S   ++ L   +    K + A + F  M + GF P + + +  +S L  + +V  AL 
Sbjct: 75  EPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALE 134

Query: 250 --FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
             F+K + R   S N    N +++  CK   IERA ++ + M S G++P   TYNT++SG
Sbjct: 135 MLFHKMIERG-CSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +S A +F + M   G  P+V+ +N L+    K+GK  EA ++F ++ A    P+
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            VTYN+++ G  +  N +    ++++M+ +G   +  TY+ ++ G C+  K   A  +++
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ K   VP+  TY+ L+ G C     ++A +L+ +M+ +GC P+   + ++++  C+  
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A  +   M+E+ + PD +  + L  GL   GK + A  L  +M   G  P
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 148/285 (51%), Gaps = 1/285 (0%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SPN YT  +V+ +FCK G +    ++F+ M   G  P    YN LI G+  KG +  A +
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M   G++P++ T+N+L+  FCK+ K+ EA  +F  M      P+VVTY+T+I+G  
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 380 QVGN-SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           + G  +E    L+ +M+  G   + + YNALI GLCK+   ++A  L++++     VP+ 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ +++G C       A Q + SM   G  P+   +  L+    +    D A ++  +
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           ++ K   PD++  + +  GL      + A ++F+KM   G  P G
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNG 289



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 152/321 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C ++ + ++ L       +    A     +M   G++P   + N  LS L    +V  
Sbjct: 143 RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSE 202

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  F+  M     SP+V   N ++ A  K G  + A+++FK++ + G++P   TYN+++ 
Sbjct: 203 AKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILL 262

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G   K  +  A +    M  +G  PN  T++ ++ G C+  K+ +A+++  EM      P
Sbjct: 263 GLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYN L++G  +    +    L+  M+ NG   DI++Y+ ++ GLCK  K   A  L 
Sbjct: 323 DVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLF 382

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  LVP+  T++ L+ G C     + A  L   M  SGC P+   +  LM+   + 
Sbjct: 383 DRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQ 442

Query: 487 EDFDRAAEVLLEMLEKCMAPD 507
               +A  +   M EK    D
Sbjct: 443 GRHIQADRLTQAMKEKGFLSD 463


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 177/327 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM   G  P I + +  +      +RVD+A   + +M +  + P+  T N +++  CK+G
Sbjct: 120 QMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVG 179

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
              +AVE F + E+ G  P+V TY T+I+G C  G  + A      ME+ G QPNV+T+N
Sbjct: 180 KFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYN 239

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK   ++EA  IFS MKA  +SP++ TYN+LI G       +  ++L  EM   
Sbjct: 240 ILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL 299

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  +I T+N L+  +CKEGK  +A  + K + +  + P+  TYS+L+ G  +R     A
Sbjct: 300 NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEA 359

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+ +MI  GC+P+   + +L+  +C+ +  D A ++  EM+ + + PD++  + L  G
Sbjct: 360 RKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHG 419

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L   G+   A  LF+ M   G LP  F
Sbjct: 420 LCQLGRLREAQDLFKNMHSNGNLPDLF 446



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 169/355 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +++L  +    K    A D F  M+     P I + N  +  L +  R   A 
Sbjct: 231 CQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEAS 290

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    I PN++T N+++ A CK G +  A  VFK M  MG  P V TY++L+ G+
Sbjct: 291 ALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGY 350

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +  +  A K  + M   G +P+  ++N LI G+CK  ++ EA ++F+EM    ++P+ 
Sbjct: 351 SLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDN 410

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V YNTLI+G  Q+G       L++ M  NG   D+ TY+ L+ G CKEG   KA  L + 
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L P+ + Y+ LI   C   N + A +L+  +   G  PN  I+  +++  C+   
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            D A E    M      PD    + +  G      +  A +L  +M  RG + + 
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEA 585



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 163/348 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L        KF  A + F      G  P + +    ++ L        A G +K+
Sbjct: 166 VTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKK 225

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PNV T N+++ + CK  ++  A+++F  M++    P + TYN+LI G CN   
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A    N M    I PN+ TFN L+   CK+GK+ EA  +F  M    V P+VVTY++
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ GY           L++ M+  G K D  +YN LI G CK  +  +A  L  ++    
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+   Y+ LI G C       A  L+K+M  +G  P+   + ML+  FC+     +A 
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +   M    + PD  + + L   +   G  + A KLF ++ ++GLLP
Sbjct: 466 RLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLP 513



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 175/333 (52%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M + G  P + + N  + SL   + V+ AL  +  M+  RISP+++T N ++ 
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C     + A  +   M S+  +P++ T+N L+   C +G +S A      M + G++P
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V+T+++L++G+  + ++ EA ++F  M      P+  +YN LI GY +    +    L+
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM+  G+  D + YN LI GLC+ G+ ++A  L K++  N  +P+  TYS L+ G C  
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKE 458

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +AF+L++ M  +  +P+  ++ +L+   C+  +   A ++  E+  + + P+  I 
Sbjct: 459 GYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIY 518

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + + + L   G  + A++ FR ME  G  P  F
Sbjct: 519 TTIINNLCKEGLLDEALEAFRNMEGDGCPPDEF 551



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 140/302 (46%), Gaps = 1/302 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV-EVFKNMESMGFIPSVTTYN 302
           +D AL  +  M      P +     ++ A  K+G    AV  + K ME  G  P + T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI    +   + LA    + M K G+QP+ +TFNTLI G CK GK  +A   F + +A+
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P V TY T+ING  ++G +   A L+++M   G + +++TYN LI  LCK+    +A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   +    + P+  TY++LI G C  +  + A  L   M      PN   F +L+  
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+      A  V   M E  + PD +  S L  G     +   A KLF  M  +G  P 
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 543 GF 544
            F
Sbjct: 375 AF 376



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 119/247 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y+ R +   A   F  M   G  P   S N  +     ++R+D A   + E
Sbjct: 341 VTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNE 400

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+    N ++H  C+LG +  A ++FKNM S G +P + TY+ L+ G C +G 
Sbjct: 401 MIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGY 460

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +   +M+   ++P++  +N LI   CK G L +A ++FSE+    + PNV  Y T
Sbjct: 461 LGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTT 520

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +IN   + G  +     +  M  +G   D  +YN +I G  +     +AA L+ ++    
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580

Query: 434 LVPNAST 440
            V  A T
Sbjct: 581 FVAEAGT 587



 Score = 42.0 bits (97), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 46/104 (44%)

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K M  +G  P+ +   +L+  F   +  D A  V  +M++  + PD++  + L +GL 
Sbjct: 117 LSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLC 176

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             GK   A++ F   E  G  P  +     IN   + GE  +  
Sbjct: 177 KVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAA 220


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 196/392 (50%), Gaps = 13/392 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  ++SFD   +LF  +  + R C  SP+ ++++      R     A D   +M 
Sbjct: 363 SLIHGLCMANSFDDARELFADM--NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 420

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P + + N  +  L  S RV+ AL  + EM R   +PN  + N ++   C+   I+
Sbjct: 421 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 480

Query: 281 RAVE---------VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           +A +         + K M   G +P V TY+TLISG C+   +  A      M K   +P
Sbjct: 481 QACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKP 540

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            V+T NTLI G CK G++ EA  +   M ++  SP+VVTYNTL++G+ + G +E    L 
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 600

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M+  G+  +++TY AL+ GLCK  +  +A  +   +  +   PN  TY+ALI G C  
Sbjct: 601 SDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSA 660

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE--KCMAPDSI 509
              +   +L+  M+ +G  P+  ++  L +  C++    RA E+L E  E  +  A    
Sbjct: 661 GQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE 720

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +      GL   GK E+A+   R M   G LP
Sbjct: 721 VYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 752



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 147/300 (49%), Gaps = 4/300 (1%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
            R K   A     +M D G +P + + +  +S L    RVD A    ++M + +  P V 
Sbjct: 484 QRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVV 543

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N ++H  CK G I+ A EV   M S G  P V TYNTL+ GHC  G    A +  + M
Sbjct: 544 TQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDM 603

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G+ PNV+T+  L+ G CK  +L EA  +F++MK++  +PN+ TY  LI G+   G  
Sbjct: 604 VARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQV 663

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA---STY 441
           + G  L+ EM+  GI  D + Y  L   LCK G++ +A  ++++  + SL   A     Y
Sbjct: 664 DGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVY 722

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
              + G       E A    + M+R G  P       L++  C++     A  VL E+++
Sbjct: 723 RFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 782



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 171/358 (47%), Gaps = 9/358 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        +   A   F +M +    P   S    +  L  + +++ A   ++++ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + ++P+      ++H  C     + A E+F +M   G  PS  TYN +I   C +G+L 
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M ++G  P+V+T+NT++ G CK  ++ EA  +F+EM+    +PN  ++NT+I
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470

Query: 376 NGYGQV---------GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            G  Q          G  +    L + M  +G   D++TY+ LI GLC   +   A +L+
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +D+ K    P   T + LI G C     + A ++  +M+ SG  P+   +  L+   C+ 
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              +RA E+L +M+ + +AP+ +  + L SGL    +   A  +F +M+  G  P  F
Sbjct: 591 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLF 648



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 160/363 (44%), Gaps = 55/363 (15%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S +  L  L+DS R+D AL  Y+E RR    P + TLN+++  FC  G +++A E+ + M
Sbjct: 182 SLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLLEGFCSRGQVDKARELLRAM 238

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMK------------------------------ 319
                 P   +Y T++ G C  G +  A++                              
Sbjct: 239 PDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGL 298

Query: 320 ------------FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                       F+ + E+N + P+  ++  LI G  K GKL++A  +F ++  + V+P+
Sbjct: 299 CQNDRIDEAVQMFEKMNERN-VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPS 357

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            V Y +LI+G     + +    L+ +M R G     +TYN +I   CK G  ++A  L+K
Sbjct: 358 TVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIK 417

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + ++  VP+  TY+ ++ G C     E A  L+  M R GC PN+     ++   CQ  
Sbjct: 418 KMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQS 477

Query: 488 DFDRAAE---------VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             D+A +         +L  M +    PD +  S L SGL    + + A  L   M  R 
Sbjct: 478 KIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537

Query: 539 LLP 541
             P
Sbjct: 538 CKP 540



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 167/422 (39%), Gaps = 77/422 (18%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P V+++L  + + R++          M D G  P   +    L  L  + ++D A     
Sbjct: 44  PDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMD 103

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EMR   I P   T + + H  C  G +ERA ++ + M     + + + YN ++   C   
Sbjct: 104 EMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAA 159

Query: 313 LLSLAMKFKNLMEKNGI--------------------------------QPNVITFNTLI 340
            +  A++    M +  I                                +P ++T N L+
Sbjct: 160 RVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLL 219

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL---------- 390
            GFC +G++ +A  +   M     +P+ V+Y T+++G  + G  E    L          
Sbjct: 220 EGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSS 279

Query: 391 -------------------------------YEEMLRNGIKVDILTYNALILGLCKEGKT 419
                                          +E+M    +  D  +Y  LI GL K GK 
Sbjct: 280 SSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKL 339

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L + L  + + P+   Y++LI G C+  + + A +L+  M R GC P+   + ++
Sbjct: 340 NDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVM 399

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+    + A +++ +M+E    PD +  + +  GL    + E A+ LF +ME  G 
Sbjct: 400 IDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC 459

Query: 540 LP 541
            P
Sbjct: 460 TP 461



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 121/283 (42%), Gaps = 8/283 (2%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P       V+  +C +G    AV++F  ME     P    YN LI     +  
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC-HSPYPDVYNVLIDSLSKRQE 59

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                K   +M   G  P+  TF T++ G CK GK+ EA  +  EM++  + P   T + 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L +     G+ E    L E M       +   YN +++ LCK  +   A  L + + +  
Sbjct: 120 LAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +   A +  +++ G       + A Q+Y+   R  C    ++   L+  FC     D+A 
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNV---LLEGFCSRGQVDKAR 232

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           E+L  M ++  APD +    +  GL   G+ E A++LF   E+
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/260 (18%), Positives = 93/260 (35%), Gaps = 59/260 (22%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVF 196
           T+ T + ++H L K  + K +  +L  ++ S                      SP  + +
Sbjct: 541 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ--------------------SPDVVTY 580

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L   +    +   A +    M   G  P + +    +S L  + R+  A G + +M+ 
Sbjct: 581 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 640

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL--- 313
           +  +PN++T   ++  FC  G ++  +++F  M   G  P    Y TL +  C  G    
Sbjct: 641 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 700

Query: 314 ----------------------------------LSLAMKFKNLMEKNGIQPNVITFNTL 339
                                             + +A+ F   M + G  P      +L
Sbjct: 701 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASL 760

Query: 340 IFGFCKKGKLHEANRIFSEM 359
           + G CK G+  EA  +  E+
Sbjct: 761 VAGLCKSGQGGEARAVLEEI 780


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 195/382 (51%), Gaps = 15/382 (3%)

Query: 191 SSPLVFDLLF-------KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           SSPL+ DLL        +  A  + F  A D   + R   F     S N+ LS+L+ +ER
Sbjct: 111 SSPLIADLLVLALASASQPLASYEAFLLAGDAHPRHRPSAF-----SVNRLLSALVAAER 165

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD+A   +K   R R+SP+++T N+V+   CK G + +A +V K++ + G  PSV TYNT
Sbjct: 166 VDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNT 225

Query: 304 LISGHCNKGLLSLAMKFKNL---MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           +I G+C +G          L   M + GI PN +TFN L+ G+CK      A R+F EMK
Sbjct: 226 IIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMK 285

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              ++ +VVTY+ L+ G    G  E G  L +EM   G+  ++ T N+++ G CK+G   
Sbjct: 286 QQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMT 345

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A   +  +++ ++ PN  TY+ L+ G       + A  + ++M   G RPN  I+  L+
Sbjct: 346 DAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLI 405

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + F +N D+   + +L EM  K +  D +  + L   L   G+   A+KL  +M + GL 
Sbjct: 406 AGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLE 465

Query: 541 PKGFDKLRTINCAPENGEKESG 562
           P        IN   E G  +S 
Sbjct: 466 PVHLTYNTIINGYCEKGNIKSA 487



 Score =  174 bits (442), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 185/406 (45%), Gaps = 46/406 (11%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S   +L  ++ ++  DL  + F + L   R        F+++        + R A D   
Sbjct: 152 SVNRLLSALVAAERVDLAERAFKAALR--RRVSPDLFTFNIVISGLCKTGQLRKAGDVAK 209

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSER------VDIALGFYKEMRRNRISPNVYTLNMVMH 271
            +R +G  P + + N  +       R      VD  L   KEM    ISPN  T N++++
Sbjct: 210 DIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALL---KEMVEAGISPNEVTFNVLVN 266

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK      AV VF+ M+  G   SV TY+ L+ G C++G +   +K  + M+  G+ P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV---------- 381
           N+ T N+++ GFCKKG + +A      M+  NV PNVVTY  L++GY ++          
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 382 -------------------------GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                                    G+    + L +EM   G++ DI+TYN LI  LC +
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVK 446

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ +KA  L+ ++    L P   TY+ +I G C + N + A+++   M +   R N   +
Sbjct: 447 GEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTY 506

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            + +   C+    +   E+L EMLEK + P+ +    +  G+   G
Sbjct: 507 NVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKG 552



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 112/264 (42%), Gaps = 35/264 (13%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S + +  L        K         +M+D G +P + + N  L+       +  A G+
Sbjct: 291 ASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGW 350

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS------------- 297
              M +  + PNV T  +++  + +L  ++ A+ V + M   G  P+             
Sbjct: 351 IDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTR 410

Query: 298 ----------------------VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
                                 + TYN LI   C KG +  A+K  + M   G++P  +T
Sbjct: 411 NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLT 470

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT+I G+C+KG +  A  I + M+      NVVTYN  I    ++G  E    L  EML
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530

Query: 396 RNGIKVDILTYNALILGLCKEGKT 419
             G+  + +TY+ +  G+ ++G T
Sbjct: 531 EKGLVPNGVTYDTIKEGMMEKGYT 554


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/324 (32%), Positives = 173/324 (53%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P + + N  + SL     V  A+ F+ EM +  I P+V+T + ++H FC LG
Sbjct: 70  KMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLG 129

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  +FK M     IP+  T+  LI G C K ++S A      M + G++P+V T+N
Sbjct: 130 RVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYN 189

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G+C + ++ EA ++F+ M     +PNV +YN LING+ + G  +    L  EM   
Sbjct: 190 ALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  DI TY+ L+ G C+ G+ ++A  L+K++    L+PN  TYS ++ G C   + + A
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F+L K+M  S   PN  I+ +L+   C     + A E+   +  K + P  +  + + SG
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISG 369

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G    A +LFR+M + G LP
Sbjct: 370 LLKGGLSNEACELFREMAVNGCLP 393



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 173/349 (49%), Gaps = 2/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L      + K  +A   F +M   G  P + + +  ++ L       +AL   K+
Sbjct: 11  VTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKK 70

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PNV   N ++ + CK  ++  A++ F  M   G  P V TY++++ G CN G 
Sbjct: 71  MEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGR 130

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           ++ A   FK ++E+N I PN +TF  LI G CKK  + EA  +F  M    + P+V TYN
Sbjct: 131 VNEATSLFKQMVERNVI-PNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYN 189

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++GY      +    L+  M R G   ++ +YN LI G CK G+  +A  L+ ++   
Sbjct: 190 ALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK 249

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           SL P+  TYS L+ G C     + A +L K M   G  PN   + +++   C++   D A
Sbjct: 250 SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEA 309

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+L  M E  + P+  I + L  G+   GK E A +LF  + ++G+ P
Sbjct: 310 FELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQP 358



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 177/351 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ +  +    +    A D F +M   G  P + + +  L    +  RV+ A 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K+M    + PN  T  +++   CK  +I  A  VF+ M   G  P V TYN L+ G+
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C++  +  A K  N+M++ G  PNV ++N LI G CK G++ EA  + +EM   +++P++
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY+TL+ G+ QVG  +    L +EM   G+  +++TY+ ++ GLCK G   +A  L+K 
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + ++ + PN   Y+ LI G C     E A +L+ ++   G +P    + +++S   +   
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            + A E+  EM      P+S   + +  G    G    A++L  +M  +G 
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGF 426



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 154/283 (54%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P + T N ++   C    I  AV++F  M  MG  P V TY+T+I+G C  G  ++A+
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    ME+ G +PNV+ +NT+I   CK   + EA   FSEM    + P+V TY+++++G+
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
             +G      SL+++M+   +  + +T+  LI GLCK+    +A  + + + +  L P+ 
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+AL+ G C R   + A +L+  M R GC PN   + +L++  C++   D A  +L E
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M  K + PD    S L  G    G+ + A +L ++M   GLLP
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLP 288



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 153/306 (50%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + +  +   AT  F QM +   +P   +    +  L     +  A   ++ M    + P+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           VYT N ++  +C    ++ A ++F  M+  G  P+V +YN LI+GHC  G +  A     
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M    + P++ T++TL+ GFC+ G+  EA  +  EM +  + PN++TY+ +++G  + G
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHG 304

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + +    L + M  + I+ +I  Y  LI G+C  GK + A  L  +L    + P   TY+
Sbjct: 305 HLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYT 364

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +I+G      S  A +L++ M  +GC PN   + +++  F +N D   A  ++ EM+ K
Sbjct: 365 VMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGK 424

Query: 503 CMAPDS 508
             + DS
Sbjct: 425 GFSADS 430



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 153/322 (47%), Gaps = 21/322 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS----YRMCDSSPLVFD 197
           T+S +LH      +   + S+ + +++ +   +P+K+  +IL       RM   + LVF+
Sbjct: 117 TYSSILHGFCNLGRVNEATSLFKQMVERNV--IPNKVTFTILIDGLCKKRMISEAWLVFE 174

Query: 198 ---------------LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                           L   Y  R +   A   F  M   G  P + S N  ++    S 
Sbjct: 175 TMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSG 234

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+D A G   EM    ++P+++T + +M  FC++G  + A E+ K M S G +P++ TY+
Sbjct: 235 RIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYS 294

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++ G C  G L  A +    M+++ I+PN+  +  LI G C  GKL  A  +FS +   
Sbjct: 295 IVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVK 354

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P VVTY  +I+G  + G S     L+ EM  NG   +  TYN +I G  + G T  A
Sbjct: 355 GIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNA 414

Query: 423 AYLVKDLDKNSLVPNASTYSAL 444
             L++++       ++ST+  L
Sbjct: 415 VRLIEEMVGKGFSADSSTFRML 436



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 147/319 (46%), Gaps = 2/319 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SIL G  +    +  + LF  ++   R    + + F +L      ++    A   F  M 
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVE--RNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + N  +       ++D A   +  M R   +PNV + N++++  CK G I+
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M      P + TY+TL+ G C  G    A +    M   G+ PN+IT++ ++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G L EA  +   M+ + + PN+  Y  LI G    G  E    L+  +   GI+
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TY  +I GL K G + +A  L +++  N  +PN+ TY+ +I G     ++  A +L
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417

Query: 461 YKSMIRSGCRPNKHIFEML 479
            + M+  G   +   F ML
Sbjct: 418 IEEMVGKGFSADSSTFRML 436



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 117/220 (53%), Gaps = 4/220 (1%)

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M K G+QP ++TFNTL+ G C K K+ +A ++F EM      P+V+TY+T+ING  ++GN
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           + M   L ++M   G K +++ YN +I  LCK+    +A     ++ K  + P+  TYS+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           ++ G C       A  L+K M+     PNK  F +L+   C+      A  V   M EK 
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 504 MAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           + PD    + L  G  +C + ++  A KLF  M+ +G  P
Sbjct: 181 LEPDVYTYNALVDG--YCSRSQMDEAQKLFNIMDRKGCAP 218



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 18/165 (10%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T+SIVL  L K+           G LD ++F+L   + +S +      + +  ++ +L
Sbjct: 290 LITYSIVLDGLCKH-----------GHLD-EAFELLKAMQESKI------EPNIFIYTIL 331

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            +      K   A + F  +   G  P + +    +S LL     + A   ++EM  N  
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            PN  T N+++  F + G    AV + + M   GF    +T+  L
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 3/447 (0%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           K L +LS H     + H  L + +  + +  FF ++ +      T+ET+ ++   L  + 
Sbjct: 75  KVLPSLSVHHVVDLINHNPLSLPQRSIFA--FFKFISSQPGFRFTVETYFVLARFLAVHE 132

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
            F  ++S++  ++     +  S +F S L   R+      + D L  TY       +A  
Sbjct: 133 MFTEAQSLIELVVSRKGKNSASSVFIS-LVEMRVTPMCGFLVDALMITYTDLGFIPDAIQ 191

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F   R + F   I  C   L  ++         GFY E+       NVY  N++M+ FC
Sbjct: 192 CFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G I  A +VF  +      P+V ++NTLI+G+C  G L    + K+ MEK+  +P+V 
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T++ LI   CK+ K+  A+ +F EM    + PN V + TLI+G+ + G  ++    Y++M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           L  G++ DI+ YN L+ G CK G    A  +V  + +  L P+  TY+ LI G C   + 
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E A ++ K M ++G   ++  F  L+   C+      A   L EML   + PD +  + +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
                  G  +   KL ++M+  G +P
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVP 518



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 165/325 (50%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   +       +A   F ++      P + S N  ++       +D       +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            ++R  P+V+T + +++A CK   ++ A  +F  M   G IP+   + TLI GH   G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L  +    M   G+QP+++ +NTL+ GFCK G L  A  I   M    + P+ +TY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + G+ E    + +EM +NGI++D + ++AL+ G+CKEG+   A   ++++ +  +
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+ ++   C + +++  F+L K M   G  P+   + +L++  C+      A  
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541

Query: 495 VLLEMLEKCMAPDSIILSELYSGLH 519
           +L  ML   + PD I  + L  G H
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHH 566



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 129/263 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L        K   A   F +M   G +P        +     +  +D+    Y++M 
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P++   N +++ FCK G +  A  +   M   G  P   TY TLI G C  G + 
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++ +  M++NGI+ + + F+ L+ G CK+G++ +A R   EM    + P+ VTY  ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G+++ G  L +EM  +G    ++TYN L+ GLCK G+ K A  L+  +    +V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552

Query: 436 PNASTYSALITGQCVRKNSERAF 458
           P+  TY+ L+ G     NS + +
Sbjct: 553 PDDITYNTLLEGHHRHANSSKRY 575



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 13/289 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD----TF 216
           +++  +   +  D    LFD       MC    +  D++F T  H        D    ++
Sbjct: 315 ALINALCKENKMDGAHGLFDE------MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P I   N  ++    +  +  A      M R  + P+  T   ++  FC+ 
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G +E A+E+ K M+  G       ++ L+ G C +G +  A +    M + GI+P+ +T+
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             ++  FCKKG      ++  EM++    P+VVTYN L+NG  ++G  +    L + ML 
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            G+  D +TYN L+ G  +   + K  Y+ K   +  +V + ++Y +++
Sbjct: 549 IGVVPDDITYNTLLEGHHRHANSSK-RYIQK--PEIGIVADLASYKSIV 594


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 9/374 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + + + ++        +   AT  F +M+  G +P   + N  ++      +V  A 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM+ + ++PNV T + V+H FC+   ++ A ++F+ M   G +P++ TYNTL+SG 
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  GL+  A +  + M + G+QP+  +++TL+ G CK GK+  A ++F +    +  P+V
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y+TLI G  + G  +    L+E+M  N  + D++T+ AL+ GLCK  + ++A  +++ 
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++  +  PN  TYS+LI G C       A +++K MI  G  PN   +  L+  FC    
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK------ 542
            D A  ++ EM      PD I  + L  GL   G+   A +LF  M+ +   P       
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 543 ---GFDKLRTINCA 553
              GF KL  I+ A
Sbjct: 482 LIGGFCKLERIDMA 495



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 187/378 (49%), Gaps = 2/378 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S ++++ G+  +   D+  K+F+    S   C    + +  L        +   A   F 
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR+    P + +    +  L   +R+  A    + M     +PNV T + ++   CK G
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 385

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A EVFK M   G  P+V TYN+LI G C    +  A+     M   G  P++IT+N
Sbjct: 386 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 445

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G CK G+  EANR+F +MKA   +P+V+TY+ LI G+ ++   +M  +L+++ML+ 
Sbjct: 446 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 505

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++T++ L+ G C  G    A  L++++  +   P+  TY++L+ G C       A
Sbjct: 506 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 565

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++ K M + GC+PN   +  L+  FC+      A  +L EM+   + P+ I    L  G
Sbjct: 566 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGG 625

Query: 518 LHHCGKDELAMKLFRKME 535
               G  E A K+  ++E
Sbjct: 626 FCGTGDLEEARKILERLE 643



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 175/341 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + K   A   F QM + G +P + + N  LS L  +  +D A     E
Sbjct: 197 VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+ ++ + +M   CK G I+ A++VF++  +    P V  Y+TLI+G C  G 
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K    M +N  +P+V+TF  L+ G CK  +L EA ++   M+  N +PNV+TY++
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       +++ M+  GI+ +++TYN+LI G C       A  L++++    
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +P+  TY+ LI G C    +  A +L+  M    C P+   +  L+  FC+ E  D A 
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  +ML++ + PD +  S L  G  + G  + A +L  +M
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 537



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 178/381 (46%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   KLF  ++ +   C  + + ++ L            A +   +MR
Sbjct: 201 TVIHGFCRQTKVDTAYKLFRQMVEN--GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   S +  ++ L  + ++D+AL  +++       P+V   + ++   CK G ++
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F+ M      P V T+  L+ G C    L  A +    ME     PNVIT+++LI
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G++ +A  +F  M    + PNVVTYN+LI+G+      +    L EEM   G  
Sbjct: 379 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 438

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+TYN LI GLCK G+  +A  L  D+      P+  TYS LI G C  +  + A  L
Sbjct: 439 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 498

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M++    P+   F  L+  +C     D A  +L EM+    +PD    + L  G   
Sbjct: 499 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 558

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+   A ++ ++M  RG  P
Sbjct: 559 VGRMVEARRVLKRMAKRGCQP 579



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 180/381 (47%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+  +   D   +L D +    R        +D L        K   A   F    
Sbjct: 236 TLLSGLCRNGLMDEAYELLDEM--RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +    P + + +  ++ L  + R+D A   +++MR N   P+V T   +M   CK   ++
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +V + ME     P+V TY++LI G C  G +  A +    M   GI+PNV+T+N+LI
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC    +  A  +  EM AT   P+++TYNTLI+G  + G +     L+ +M      
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 473

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TY+ LI G CK  +   A  L  D+ K +++P+  T+S L+ G C     + A +L
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M+ S C P+ + +  L+  FC+      A  VL  M ++   P+ +  + L      
Sbjct: 534 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 593

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            GK  +A +L  +M   G+ P
Sbjct: 594 AGKPTVAYRLLEEMVGNGVQP 614



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 159/315 (50%), Gaps = 3/315 (0%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +  GF   + + N+   +LL + R+D      K      I+PNV+T  +V+   CK G +
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++A E+ + M   G +P    YN +I   C     + A+ +   ME    + NVIT+  +
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIM 132

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK  +L EA   F++MK     PN  TYN LING+ +V        L +EM  +G+
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL 192

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +++TY+ +I G C++ K   A  L + + +N  +PN  TY+ L++G C     + A++
Sbjct: 193 APNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYE 252

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M   G +P+K  ++ LM+  C+    D A +V  +       PD +  S L +GL 
Sbjct: 253 LLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLC 312

Query: 520 HCGKDELAMKLFRKM 534
             G+ + A KLF KM
Sbjct: 313 KAGRLDEACKLFEKM 327



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 7/379 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   D      ++ +++    R C  + + +  L        + R+A + F +M 
Sbjct: 341 ALMDGLCKGDRLQEAQQVLETM--EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 398

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + N  +     +  VD AL   +EM      P++ T N ++   CK G   
Sbjct: 399 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 458

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F +M++    P V TY+ LI G C    + +A    + M K  + P+V+TF+TL+
Sbjct: 459 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 518

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C  G + +A R+  EM A++ SP+V TY +L++G+ +VG       + + M + G +
Sbjct: 519 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 578

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++TY ALI   C+ GK   A  L++++  N + PN  TY +LI G C   + E A ++
Sbjct: 579 PNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKI 638

Query: 461 YKSMIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            + + R   C+ +   + ++M   C+      A E+L  + +    P   I   L  GL 
Sbjct: 639 LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL- 697

Query: 520 HCGKDEL--AMKLFRKMEI 536
            C   EL  AM++  +M +
Sbjct: 698 -CQGKELGKAMEVLEEMTL 715



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 156/334 (46%), Gaps = 26/334 (7%)

Query: 245 DIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           D AL F+    + +    NVYT N +  A  +   I+    + KN    G  P+V TY  
Sbjct: 5   DAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I G C  G L  A +    M ++G  P+   +N +I   CK     +A   F  M+   
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMEC-- 122

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              NV+T+  +I+G  +        + + +M + G   +  TYN LI G CK  K  +A 
Sbjct: 123 -EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+K++ ++ L PN  TYS +I G C +   + A++L++ M+ +GC PN   +  L+S  
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME-------- 535
           C+N   D A E+L EM E+ + PD      L +GL   GK ++A+K+F            
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 536 ------IRGLLPKG--------FDKLRTINCAPE 555
                 I GL   G        F+K+R  +C P+
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPD 335



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 132/261 (50%), Gaps = 2/261 (0%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ER+D+A   + +M +  + P+V T + ++  +C  G+++ A  + + M +    P V TY
Sbjct: 490 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 549

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            +L+ G C  G +  A +    M K G QPNV+T+  LI  FC+ GK   A R+  EM  
Sbjct: 550 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTK 420
             V PNV+TY +LI G+   G+ E    + E + R+   K D+  Y  ++ GLC+ G+  
Sbjct: 610 NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMS 669

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEML 479
            A  L++ + ++   P    Y ALI G C  K   +A ++ + M  S   RPN   +E +
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 729

Query: 480 MSTFCQNEDFDRAAEVLLEML 500
           +    +    + A  +  E+L
Sbjct: 730 IQELAREGRHEEANALADELL 750



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 8/241 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL--LFKTYAHRKKFRNATDTFCQ 218
           +++ G  ++   D   +L + ++ S    D SP V+    L   +    +   A     +
Sbjct: 516 TLVEGYCNAGLVDDAERLLEEMVAS----DCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 571

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + +    + +   + +  +A    +EM  N + PNV T   ++  FC  G 
Sbjct: 572 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGD 631

Query: 279 IERAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           +E A ++ + +E        +  Y  ++ G C  G +S A++    ++++G  P    + 
Sbjct: 632 LEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 691

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVS-PNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            LI G C+  +L +A  +  EM  +  S PN   Y  +I    + G  E   +L +E+L 
Sbjct: 692 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 751

Query: 397 N 397
           N
Sbjct: 752 N 752


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 179/353 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++ +  ++L   Y    +  +A     Q    GF P   + N F++ L  ++ V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+V+T N+V++  CK G +E A  +   M   G +P +TT+NTLI+  
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A+     +   G+ P+V TFN LI   CK G  H A R+F EMK +  +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+    +G       L ++M   G     +TYN +I GLCK+ + ++A  +   
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  K  + AF+L   MI  G +PN   +  +++ +C+  D
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AA++L  M       D +    L +GL   G+ ++A+K+ R M I+G+ P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           + + G+  +D      K+ D ++      D     ++++        +   A     QM 
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP I + N  +++L    R++ AL   +++    +SP+VYT N++++A CK+G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+ M++ G  P   TYNTLI   C+ G L  A+     ME  G   + IT+NT+I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKK ++ EA  +F +M    +S N +T+NTLI+G  +    +    L  +M+  G++
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN+++   CK+G  KKAA +++ +  N    +  TY  LI G C    ++ A ++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M   G RP    +  ++ +  +  +   A  +  EM E    PD++    ++ GL  
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 521 CGKD-ELAMKLFRKMEIRGLLPK 542
            G   + A     +M  +G +P+
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 25/407 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T   ++IV++ L KN + + ++ IL  ++D                  R C 
Sbjct: 315 EGHDPDVFT---YNIVVNCLCKNGQLEEAKGILNQMVD------------------RGCL 353

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L        +   A D   Q+   G  P + + N  +++L       +AL  
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N ++   C LG + +A+++ K+MES G   S  TYNT+I G C 
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  N ITFNTLI G CK  K+ +A  + ++M +  + PN +T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + E M  NG +VD++TY  LI GLCK G+T+ A  +++ + 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ ++     R N   A  L++ M   G  P+   ++++    C+     
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             A + +LEM++K   P+      L  GL + G D+      R +EI
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY---FIRAIEI 697



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 6/343 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRD--YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
             +Y  ++ F +A D         +G        N  L+ L++  ++ +    Y EM   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V T N +M A C+   +  AV + + M S G  P  TT+ TL+ G   +G +  A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M + G     +T N LI G+CK G++ +A     +  A    P+ +TYNT +NG
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295

Query: 378 YGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Q  N  +G +L   + M++ G   D+ TYN ++  LCK G+ ++A  ++  +     +
Sbjct: 296 LCQ--NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +T++ LI   C     E A  L + +   G  P+ + F +L++  C+  D   A  +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             EM      PD +  + L   L   GK   A+ L + ME  G
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M + G  P V T+NTL+   C    +  A+     M   G+ P+  TF TL+ GF 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ + M     S   VT N LINGY ++G  E      ++ + +G + D +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN  + GLC+      A  ++  + +    P+  TY+ ++   C     E A  +   M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   F  L++  C     + A ++  ++  K ++PD    + L + L   G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 525 ELAMKLFRKMEIRGLLP 541
            LA++LF +M+  G  P
Sbjct: 408 HLALRLFEEMKNSGCTP 424



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG- 277
           MR  G  P  ++ N  L SL     +  AL  ++EM      P+  T  +V    C+ G 
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITF 336
            I+ A +    M   GFIP  +++  L  G  N G+    ++  + +MEK  ++ + +  
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDV-- 709

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATN 363
            + I G+ K  K ++A   F      N
Sbjct: 710 -SAIRGYLKIRKFYDALATFGRFLEIN 735


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/406 (31%), Positives = 199/406 (49%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+E++ IV HIL   R +  +  ILR ++ S +      +FD +  +  +C     VFD 
Sbjct: 9   TIESYCIVAHILFCARMYYDANRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDA 68

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LF        F  A   F +M+     P   SCN  L       + D    F+K+M    
Sbjct: 69  LFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAG 128

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P V+T N+++   CK G IE A  +F+ M+  G IP   TYN++I G+   G L   +
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            F   M+    +P+VIT+NTLI  FCK GKL +    F EMK + + PNVV+Y+TL++ +
Sbjct: 189 YFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAF 248

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    +     Y +M R G+  +  TY +L+   CK G    A  L  ++ +  +  N 
Sbjct: 249 CKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNV 308

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ALI G C  +  + A +L+  M+ +G  PN   +  L+  F + ++ DRA E+L E
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           M  + + PD ++       L    K E A  +  +M+ +G+    F
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTF 414



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 146/300 (48%), Gaps = 2/300 (0%)

Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           S P VF  +++            A+  F +M+  G +P   + N  +       R+D  +
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM+     P+V T N +++ FCK G + + +E F+ M+  G  P+V +Y+TL+   
Sbjct: 189 YFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAF 248

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C + ++  A+KF   M + G+ PN  T+ +L+  +CK G L +A R+  EM    V  NV
Sbjct: 249 CKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNV 308

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G   V   +    L+ +M+  G+  ++ +Y ALI G  K     +A  L+ +
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+   Y   I   C  +  E A  +   M   G + N  I+  LM  + ++E+
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 181/403 (44%), Gaps = 38/403 (9%)

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           +  S LF+ + +   + D+  + ++ +   Y    +  +    F +M+     P + + N
Sbjct: 150 EAASGLFEEMKFRGLIPDT--VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYN 207

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++      ++   L F++EM+++ + PNV + + ++ AFCK  ++++A++ + +M  +
Sbjct: 208 TLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRL 267

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P+  TY +L+  +C  G LS A +  + M + G++ NV+T+  LI G C   ++ EA
Sbjct: 268 GLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEA 327

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M    V PN+ +Y  LI+G+ +  N +    L +EM   GIK D+L Y   I  
Sbjct: 328 EELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWS 387

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPN----------------------------------- 437
           LC   K + A  ++ ++ +  +  N                                   
Sbjct: 388 LCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVT 447

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           A T+  LI G C  K   +A   +  +    G + N  I+  ++   C+ +  + A  + 
Sbjct: 448 AVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLF 507

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +M +K + PD    + L  G    G    A+ L  KM   G+
Sbjct: 508 EQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/439 (20%), Positives = 176/439 (40%), Gaps = 93/439 (21%)

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESIL-----RGILDS--------DSFDLPSKLFDSI 182
           S  T+ T++I++  + K    +++  +      RG++          D +    +L D++
Sbjct: 129 SKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 183 LYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
            +   M    C+   + ++ L   +    K     + F +M+  G  P + S +  + + 
Sbjct: 189 YFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAF 248

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG--------------------- 277
              + +  AL FY +MRR  + PN +T   ++ A+CK+G                     
Sbjct: 249 CKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNV 308

Query: 278 --------------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
                          I+ A E+F  M + G IP++ +Y  LI G      +  A++  + 
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M+  GI+P+++ + T I+  C   K+  A  + +EM+   +  N   Y TL++ Y +  N
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428

Query: 384 SEMGAS-------------------LYEEMLRN-----------------GIKVDILTYN 407
              G                     L + + +N                 G++ +   Y 
Sbjct: 429 PSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 488

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           A+I GLCKE + + A  L + + +  LVP+ + Y++LI G+  + N  +A  L   M   
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548

Query: 468 GCRPNKHIFEMLMSTFCQN 486
           G        ++     CQN
Sbjct: 549 GVESGARFGDL-----CQN 562


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 179/353 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++ +  ++L   Y    +  +A     Q    GF P   + N F++ L  ++ V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+V+T N+V++  CK G +E A  +   M   G +P +TT+NTLI+  
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A+     +   G+ P+V TFN LI   CK G  H A R+F EMK +  +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+    +G       L ++M   G     +TYN +I GLCK+ + ++A  +   
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  K  + AF+L   MI  G +PN   +  +++ +C+  D
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AA++L  M       D +    L +GL   G+ ++A+K+ R M I+G+ P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           + + G+  +D      K+ D ++      D     ++++        +   A     QM 
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP I + N  +++L    R++ AL   +++    +SP+VYT N++++A CK+G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+ M++ G  P   TYNTLI   C+ G L  A+     ME  G   + IT+NT+I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKK ++ EA  +F +M    +S N +T+NTLI+G  +    +    L  +M+  G++
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 528

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN+++   CK+G  KKAA +++ +  N    +  TY  LI G C    ++ A ++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M   G RP    +  ++ +  +  +   A  +  EM E    PD++    ++ GL  
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 521 CGKD-ELAMKLFRKMEIRGLLPK 542
            G   + A     +M  +G +P+
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 25/407 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T   ++IV++ L KN + + ++ IL  ++D                  R C 
Sbjct: 315 EGHDPDVFT---YNIVVNCLCKNGQLEEAKGILNQMVD------------------RGCL 353

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L        +   A D   Q+   G  P + + N  +++L       +AL  
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N ++   C LG + +A+++ K+MES G   S  TYNT+I G C 
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  N ITFNTLI G CK  K+ +A  + ++M +  + PN +T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + E M  NG +VD++TY  LI GLCK G+T+ A  +++ + 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ ++     R N   A  L++ M   G  P+   ++++    C+     
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             A + +LEM++K   P+      L  GL + G D+      R +EI
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY---FIRAIEI 697



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 6/343 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRD--YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
             +Y  ++ F +A D         +G        N  L+ L++  ++ +    Y EM   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V T N +M A C+   +  AV + + M S G  P  TT+ TL+ G   +G +  A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M + G     +T N LI G+CK G++ +A     +  A    P+ +TYNT +NG
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295

Query: 378 YGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Q  N  +G +L   + M++ G   D+ TYN ++  LCK G+ ++A  ++  +     +
Sbjct: 296 LCQ--NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +T++ LI   C     E A  L + +   G  P+ + F +L++  C+  D   A  +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             EM      PD +  + L   L   GK   A+ L + ME  G
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M + G  P V T+NTL+   C    +  A+     M   G+ P+  TF TL+ GF 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ + M     S   VT N LINGY ++G  E      ++ + +G + D +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN  + GLC+      A  ++  + +    P+  TY+ ++   C     E A  +   M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   F  L++  C     + A ++  ++  K ++PD    + L + L   G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 525 ELAMKLFRKMEIRGLLP 541
            LA++LF +M+  G  P
Sbjct: 408 HLALRLFEEMKNSGCTP 424



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG- 277
           MR  G  P  ++ N  L SL     +  AL  ++EM      P+  T  +V    C+ G 
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITF 336
            I+ A +    M   GFIP  +++  L  G  N G+    ++  + +MEK  ++ + +  
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDV-- 709

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATN 363
            + I G+ K  K ++A   F      N
Sbjct: 710 -SAIRGYLKIRKFYDALATFGRFLEIN 735


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 182/350 (52%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K          QM  +G  P + +    ++SL    RVD A    
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    ME+   QPNV+ F+TLI   CK  ++ EA  IFSEM    +SPN+VTY
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+G  ++   +   +L  EM+ + I  D+ T N ++  LCKEG   +A  +V  +  
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 308

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY+AL+ G C+R   + A +++ +M+   C  N   +  L++ +C+ +  D+
Sbjct: 309 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM  + + P+++  + L  GL H G+ + A+ LF +M  RG +P
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 171/350 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +VF  L  +    ++   A + F +M   G  P I + N  +  L          
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I P+V+TLN V+ A CK G++  A +V   M   G  P+V TYN L+ GH
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  + +A+K  + M       NVI++NTLI G+CK   + +A  +F EM    ++PN 
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+G   VG  +   SL+ EM+  G   D++TY  L   LCK     KA  L+K 
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ ++  P+   Y+ ++ G C     E A  L+ ++   G +PN   + +++   C+   
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              A+++  EM +   +P+    + +  G     +    ++L  +M  RG
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 555



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 164/335 (48%), Gaps = 13/335 (3%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + SL    +V  A   + EM    ISPN+ T N ++H  CKL   +    +   M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P V T NT++   C +G+++ A    ++M   G++PNV+T+N L+ G C + ++  A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F  M   +   NV++YNTLINGY ++ + +    L+EEM R  +  + +TYN LI GL
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G+ + A  L  ++     +P+  TY  L    C  ++ ++A  L K++  S   P+ 
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            I+  ++   C+  + + A ++   +  K + P+    + +  GL   G    A KLF +
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 534 MEIRG---------LLPKGF----DKLRTINCAPE 555
           M   G         L+ +GF    + LRTI    E
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 177/428 (41%), Gaps = 50/428 (11%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           +LT   K K   ++L      DSF +P  ++                  ++  +  H  +
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY---------------TLAIVINSLCHLNR 120

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A     ++   G  P   +    +  L    ++  AL  + +M      PNV T   
Sbjct: 121 VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 180

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  CK+G    A+ + ++ME     P+V  ++TLI   C    ++ A    + M   G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240

Query: 329 IQPNVITFNTLIFG-----------------------------------FCKKGKLHEAN 353
           I PN++T+N+LI G                                    CK+G + EA+
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +   M    V PNVVTYN L++G+      ++   +++ M+      ++++YN LI G 
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK     KA YL +++ +  L PN  TY+ LI G C     + A  L+  M+  G  P+ 
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L    C+N   D+A  +L  +      PD  I + +  G+   G+ E A  LF  
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480

Query: 534 MEIRGLLP 541
           +  +GL P
Sbjct: 481 LSSKGLQP 488



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 21/342 (6%)

Query: 84  IAYSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           + Y+ LIH      +WK +T L   +       V  K+  D V +L   T V       +
Sbjct: 246 VTYNSLIHGLCKLCEWKHVTTLMNEM-------VDSKIMPD-VFTLN--TVVDALCKEGM 295

Query: 139 TLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
             E H +V  ++ +  +    +  +++ G    +  D+  K+FD++++  + C ++ + +
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH--KDCVANVISY 353

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L   Y   +    A   F +M      P   + N  +  L    R+  A+  + EM  
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               P++ T   +    CK   +++A+ + K +E   + P +  Y T++ G C  G L  
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473

Query: 317 AMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           A   F NL  K G+QPNV T+N +I G CK+G L EA+++FSEM     SPN  TYN + 
Sbjct: 474 ARDLFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLIT 532

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            G+ +   +     L EEML  G  VD+ T   L+  L  +G
Sbjct: 533 RGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 126/260 (48%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +R  + + + ++ L   +  R +   A   F  M     +  + S N  ++     + VD
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+  ++EM R  ++PN  T N ++H  C +G ++ A+ +F  M + G IP + TY TL 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              C    L  AM     +E +   P++  + T++ G C+ G+L +A  +FS + +  + 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNV TYN +I+G  + G     + L+ EM +NG   +  TYN +  G  +  +  +   L
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 426 VKDLDKNSLVPNASTYSALI 445
           ++++       + ST + L+
Sbjct: 548 LEEMLARGFSVDVSTTTLLV 567



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 110/246 (44%)

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           +++NT  S   +   L  A+   N M      P+ + FN L+    K         +  +
Sbjct: 36  SSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M +  + P+V T   +IN    +   +   S   ++L+ G + D  T+  LI GLC EGK
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A +L   +      PN  TY  LI G C   N+  A +L +SM +  C+PN  +F  
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+ + C++     A  +  EM+ K ++P+ +  + L  GL    + +    L  +M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 539 LLPKGF 544
           ++P  F
Sbjct: 276 IMPDVF 281


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 179/353 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++ +  ++L   Y    +  +A     Q    GF P   + N F++ L  ++ V  AL
Sbjct: 155 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 214

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+V+T N+V++  CK G +E A  +   M   G +P +TT+NTLI+  
Sbjct: 215 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 274

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A+     +   G+ P+V TFN LI   CK G  H A R+F EMK +  +P+ 
Sbjct: 275 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 334

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+    +G       L ++M   G     +TYN +I GLCK+ + ++A  +   
Sbjct: 335 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 394

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  K  + AF+L   MI  G +PN   +  +++ +C+  D
Sbjct: 395 MDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGD 454

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AA++L  M       D +    L +GL   G+ ++A+K+ R M I+G+ P
Sbjct: 455 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           + + G+  +D      K+ D ++      D     ++++        +   A     QM 
Sbjct: 199 TFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 256

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP I + N  +++L    R++ AL   +++    +SP+VYT N++++A CK+G   
Sbjct: 257 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 316

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+ M++ G  P   TYNTLI   C+ G L  A+     ME  G   + IT+NT+I
Sbjct: 317 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 376

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKK ++ EA  +F +M    +S N +T+NTLI+G  +    +    L  +M+  G++
Sbjct: 377 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQ 436

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN+++   CK+G  KKAA +++ +  N    +  TY  LI G C    ++ A ++
Sbjct: 437 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 496

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M   G RP    +  ++ +  +  +   A  +  EM E    PD++    ++ GL  
Sbjct: 497 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 556

Query: 521 CGKD-ELAMKLFRKMEIRGLLPK 542
            G   + A     +M  +G +P+
Sbjct: 557 GGGPIKEAFDFMLEMVDKGFIPE 579



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 25/407 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T   ++IV++ L KN + + ++ IL  ++D                  R C 
Sbjct: 223 EGHDPDVFT---YNIVVNCLCKNGQLEEAKGILNQMVD------------------RGCL 261

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L        +   A D   Q+   G  P + + N  +++L       +AL  
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N ++   C LG + +A+++ K+MES G   S  TYNT+I G C 
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  N ITFNTLI G CK  K+ +A  + ++M +  + PN +T
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + E M  NG +VD++TY  LI GLCK G+T+ A  +++ + 
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ ++     R N   A  L++ M   G  P+   ++++    C+     
Sbjct: 502 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 561

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             A + +LEM++K   P+      L  GL + G D+      R +EI
Sbjct: 562 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY---FIRAIEI 605



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 6/343 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRD--YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
             +Y  ++ F +A D         +G        N  L+ L++  ++ +    Y EM   
Sbjct: 24  LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 83

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V T N +M A C+   +  AV + + M S G  P  TT+ TL+ G   +G +  A
Sbjct: 84  GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 143

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M + G     +T N LI G+CK G++ +A     +  A    P+ +TYNT +NG
Sbjct: 144 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 203

Query: 378 YGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Q  N  +G +L   + M++ G   D+ TYN ++  LCK G+ ++A  ++  +     +
Sbjct: 204 LCQ--NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +T++ LI   C     E A  L + +   G  P+ + F +L++  C+  D   A  +
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             EM      PD +  + L   L   GK   A+ L + ME  G
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M + G  P V T+NTL+   C    +  A+     M   G+ P+  TF TL+ GF 
Sbjct: 76  VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 135

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ + M     S   VT N LINGY ++G  E      ++ + +G + D +
Sbjct: 136 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN  + GLC+      A  ++  + +    P+  TY+ ++   C     E A  +   M
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   F  L++  C     + A ++  ++  K ++PD    + L + L   G  
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 315

Query: 525 ELAMKLFRKMEIRGLLP 541
            LA++LF +M+  G  P
Sbjct: 316 HLALRLFEEMKNSGCTP 332



 Score = 45.8 bits (107), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG- 277
           MR  G  P  ++ N  L SL     +  AL  ++EM      P+  T  +V    C+ G 
Sbjct: 500 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 559

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITF 336
            I+ A +    M   GFIP  +++  L  G  N G+    ++  + +MEK  ++ + +  
Sbjct: 560 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDV-- 617

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATN 363
            + I G+ K  K ++A   F      N
Sbjct: 618 -SAIRGYLKIRKFYDALATFGRFLEIN 643


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 225/459 (49%), Gaps = 18/459 (3%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           L +H     ++ +  K+Q  +  S     +V   + S      + ++++   +++   SS
Sbjct: 54  LYSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSS 113

Query: 160 ESILRGILDSDSFDLPSKLFDSIL----------YSYRMCDSSPLVFDL-------LFKT 202
            S    ++D   F   S  F+++L            +R  + S +  DL       + K 
Sbjct: 114 ISYFNEMVDK-GFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKG 172

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
                +   + D   ++R++GF P +      +        ++ A   + EM +  +  N
Sbjct: 173 CCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVAN 232

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +T  +++H   K GI ++  E+++ M+  G  P++ TYN +++ HC  G    A K  +
Sbjct: 233 EWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFD 292

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M + G+  N++T+NTLI G C++ K +EAN++  +MK+  ++PN++TYNTLI+G+  VG
Sbjct: 293 EMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVG 352

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                 SL  ++   G+   ++TYN L+ G CK+G T  A  +VK++++  + P+  TY+
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYT 412

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI       N E+A QL   M   G  P+ H + +L+  FC     + A+ +   M+ K
Sbjct: 413 ILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAK 472

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + P+ +I + +  G    G    A++LFR+ME + L P
Sbjct: 473 KLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LFK    ++ F    + + +M++ G  P + + N  ++      R   A   + EMR   
Sbjct: 243 LFKNGIKKQGF----EMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERG 298

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +S N+ T N ++   C+      A +V   M+S G  P++ TYNTLI G C  G L  A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ++  G+ P+++T+N L+ GFCKKG    A ++  EM+   + P+ +TY  LI+ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTF 418

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++ N E    L   M   G+  D+ TY+ LI G C +G+  +A+ L K +    L PN 
Sbjct: 419 ARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNK 478

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ ++ G C   +S RA +L++ M      PN   +  ++   C+      A  ++ +
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 499 MLEKCMAPDSIILS 512
           M++  + P   IL+
Sbjct: 539 MIDTGIDPSDSILN 552



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 156/284 (54%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ +   +    + ++A   F +MR+ G    I + N  +  L    + + A     +M+
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + I+PN+ T N ++  FC +G + +A+ + ++++S G  PS+ TYN L+SG C KG  S
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K    ME+ GI+P+ IT+  LI  F +   + +A ++ S M+   ++P+V TY+ LI
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+   G     + L++ M+   ++ + + YN ++LG CKEG + +A  L +++++  L 
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           PN ++Y  +I   C  + S+ A  L + MI +G  P+  I  ++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 2/263 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLFD +    R    + + ++ L        K   A     QM+  G  P + + N  + 
Sbjct: 289 KLFDEM--RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLID 346

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                 ++  AL   ++++   +SP++ T N+++  FCK G    A +V K ME  G  P
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKP 406

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           S  TY  LI        +  A++ ++ ME+ G+ P+V T++ LI GFC KG+++EA+R+F
Sbjct: 407 SKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M A  + PN V YNT++ GY + G+S     L+ EM    +  ++ +Y  +I  LCKE
Sbjct: 467 KLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKE 526

Query: 417 GKTKKAAYLVKDLDKNSLVPNAS 439
            K+K+A  LV+ +    + P+ S
Sbjct: 527 RKSKEAEGLVEKMIDTGIDPSDS 549


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 171/334 (51%), Gaps = 35/334 (10%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R+R+SPNVYT N+++  FC +G +++ +  F  ME  G +P+V TYNTLI  +C  G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M   G+QPN+I++N +I G C++G + EA  I  EM     +P+ VTYNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK------------------ 415
           L+NGY + GN      ++ EM+RNG+   ++TY ALI  +CK                  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 416 -----------------EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                            +G   +A  ++ ++ ++   P+  TY+A I G CV +  E A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            + + M+  G  P+   +  ++S FC+  + DRA ++  EM+EK ++PD++  S L  GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
               +   A  L ++M   GL P  F     IN 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 334



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 189/374 (50%), Gaps = 35/374 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L + +    + +     F +M   G LP + + N  + +     R+D A G  K M 
Sbjct: 13  YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              + PN+ + N++++  C+ G ++ A E+ + M   GF P   TYNTL++G+C +G   
Sbjct: 73  SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132

Query: 313 --------------------------------LLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                            L+ AM+F + M   G++PN  T+ TLI
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GF ++G L+EA RI +EM  +  SP+VVTYN  I+G+  +   E    + +EM+  G+ 
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 252

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+++Y+ +I G C++G+  +A  + +++ +  + P+A TYS+LI G C  +    A  L
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 312

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M+  G  P++  +  L++ +C   D ++A  +  EM+ K   PD++  S L +GL+ 
Sbjct: 313 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNK 372

Query: 521 CGKDELAMKLFRKM 534
             +   A +L  K+
Sbjct: 373 QARTREAKRLLFKL 386



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 172/347 (49%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++          + A +   +M   GF P   + N  L+          AL  + EM 
Sbjct: 83  YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 142

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           RN +SP+V T   ++++ CK   + RA+E F  M   G  P+  TY TLI G   +GLL+
Sbjct: 143 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 202

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  N M ++G  P+V+T+N  I G C   ++ EA  +  EM    ++P+VV+Y+T+I
Sbjct: 203 EAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTII 262

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ + G  +    + +EM+  G+  D +TY++LI GLC+  +  +A  L +++    L 
Sbjct: 263 SGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP 322

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI   CV  +  +A  L+  MI  G  P+   + +L++   +      A  +
Sbjct: 323 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 382

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
           L +++ +   P  +    L   + +C   E    + L +   ++GL+
Sbjct: 383 LFKLIYEESVPSDVTYDTL---IENCSNIEFKSVVALIKGFCMKGLM 426



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 177/397 (44%), Gaps = 21/397 (5%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+    S     ++ + +   Y+      + ++ L   Y     F  A     +M  
Sbjct: 86  IINGLCREGSMKEAWEILEEM--GYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVR 143

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++S+  +  ++ A+ F+ +MR   + PN  T   ++  F + G++  
Sbjct: 144 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 203

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M   GF PSV TYN  I GHC    +  A+     M + G+ P+V++++T+I 
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIIS 263

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC+KG+L  A ++  EM    VSP+ VTY++LI G  ++        L +EML  G+  
Sbjct: 264 GFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPP 323

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY  LI   C EG   KA +L  ++     +P+A TYS LI G   +  +  A +L 
Sbjct: 324 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 383

Query: 462 KSMIRSGCRPNKHIFEMLMST---------------FCQNEDFDRAAEVLLEMLEKCMAP 506
             +I     P+   ++ L+                 FC       A  V   M+E+   P
Sbjct: 384 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 443

Query: 507 DSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
              + + +  G  HC    L  A  L+++M   G +P
Sbjct: 444 GEAVYNVIIHG--HCRGGNLPKAFNLYKEMIHSGFVP 478



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 165/391 (42%), Gaps = 50/391 (12%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + +  L  +    +    A + F QMR  G  P   +    +        ++ A    
Sbjct: 149 SVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 208

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM  +  SP+V T N  +H  C L  +E A+ V + M   G  P V +Y+T+ISG C K
Sbjct: 209 NEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRK 268

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A + K  M + G+ P+ +T+++LI G C+  +L EA  +  EM    + P+  TY
Sbjct: 269 GELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTY 328

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV----- 426
            TLIN Y   G+      L++EM+  G   D +TY+ LI GL K+ +T++A  L+     
Sbjct: 329 TTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIY 388

Query: 427 -----KDLDKNSLV----------------------------------------PNASTY 441
                 D+  ++L+                                        P  + Y
Sbjct: 389 EESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVY 448

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I G C   N  +AF LYK MI SG  P+      L+    +    +  +EV+ + L 
Sbjct: 449 NVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR 508

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            C   ++ +   L    H  G  E  + + R
Sbjct: 509 SCRLNEAELAKVLVEINHKEGNMEAVLNVSR 539


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 182/350 (52%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K          QM  +G  P + +    ++SL    RVD A    
Sbjct: 69  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 128

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  
Sbjct: 129 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKV 188

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    ME+   QPNV+ F+TLI   CK  ++ EA  IFSEM    +SPN+VTY
Sbjct: 189 GNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTY 248

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+G  ++   +   +L  EM+ + I  D+ T N ++  LCKEG   +A  +V  +  
Sbjct: 249 NSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 308

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY+AL+ G C+R   + A +++ +M+   C  N   +  L++ +C+ +  D+
Sbjct: 309 RGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDK 368

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM  + + P+++  + L  GL H G+ + A+ LF +M  RG +P
Sbjct: 369 AMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 418



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 176/383 (45%), Gaps = 35/383 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +VF  L  +    ++   A + F +M   G  P I + N  +  L          
Sbjct: 206 CQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 265

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I P+V+TLN V+ A CK G++  A +V   M   G  P+V TYN L+ GH
Sbjct: 266 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 325

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  + +A+K  + M       NVI++NTLI G+CK   + +A  +F EM    ++PN 
Sbjct: 326 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 385

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL------------------- 409
           VTYNTLI+G   VG  +   SL+ EM+  G   D++TY  L                   
Sbjct: 386 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 445

Query: 410 ----------------ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                           + G+C+ G+ + A  L  +L    L PN  TY+ +I G C +  
Sbjct: 446 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 505

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A +L+  M ++GC PN   + ++   F +N +  R  E+L EML +  + D    + 
Sbjct: 506 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTL 565

Query: 514 LYSGLHHCGKDELAMKLFRKMEI 536
           L   L   G D+   ++  K+ I
Sbjct: 566 LVGMLSDDGLDQSVKQILCKIVI 588



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 164/335 (48%), Gaps = 13/335 (3%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + SL    +V  A   + EM    ISPN+ T N ++H  CKL   +    +   M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P V T NT++   C +G+++ A    ++M   G++PNV+T+N L+ G C + ++  A 
Sbjct: 276 IMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 335

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F  M   +   NV++YNTLINGY ++ + +    L+EEM R  +  + +TYN LI GL
Sbjct: 336 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 395

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G+ + A  L  ++     +P+  TY  L    C  ++ ++A  L K++  S   P+ 
Sbjct: 396 CHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDI 455

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            I+  ++   C+  + + A ++   +  K + P+    + +  GL   G    A KLF +
Sbjct: 456 QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSE 515

Query: 534 MEIRG---------LLPKGF----DKLRTINCAPE 555
           M   G         L+ +GF    + LRTI    E
Sbjct: 516 MNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 177/428 (41%), Gaps = 50/428 (11%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           +LT   K K   ++L      DSF +P  ++                  ++  +  H  +
Sbjct: 76  LLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY---------------TLAIVINSLCHLNR 120

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A     ++   G  P   +    +  L    ++  AL  + +M      PNV T   
Sbjct: 121 VDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGT 180

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  CK+G    A+ + ++ME     P+V  ++TLI   C    ++ A    + M   G
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240

Query: 329 IQPNVITFNTLIFG-----------------------------------FCKKGKLHEAN 353
           I PN++T+N+LI G                                    CK+G + EA+
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +   M    V PNVVTYN L++G+      ++   +++ M+      ++++YN LI G 
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK     KA YL +++ +  L PN  TY+ LI G C     + A  L+  M+  G  P+ 
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L    C+N   D+A  +L  +      PD  I + +  G+   G+ E A  LF  
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480

Query: 534 MEIRGLLP 541
           +  +GL P
Sbjct: 481 LSSKGLQP 488



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 19/341 (5%)

Query: 84  IAYSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           + Y+ LIH      +WK +T L   +       V  K+  D V +L   T V       +
Sbjct: 246 VTYNSLIHGLCKLCEWKHVTTLMNEM-------VDSKIMPD-VFTLN--TVVDALCKEGM 295

Query: 139 TLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
             E H +V  ++ +  +    +  +++ G    +  D+  K+FD++++  + C ++ + +
Sbjct: 296 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH--KDCVANVISY 353

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L   Y   +    A   F +M      P   + N  +  L    R+  A+  + EM  
Sbjct: 354 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 413

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               P++ T   +    CK   +++A+ + K +E   + P +  Y T++ G C  G L  
Sbjct: 414 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 473

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    + +   G+QPNV T+N +I G CK+G L EA+++FSEM     SPN  TYN +  
Sbjct: 474 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           G+ +   +     L EEML  G  VD+ T   L+  L  +G
Sbjct: 534 GFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 126/260 (48%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +R  + + + ++ L   +  R +   A   F  M     +  + S N  ++     + VD
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+  ++EM R  ++PN  T N ++H  C +G ++ A+ +F  M + G IP + TY TL 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              C    L  AM     +E +   P++  + T++ G C+ G+L +A  +FS + +  + 
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNV TYN +I+G  + G     + L+ EM +NG   +  TYN +  G  +  +  +   L
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 426 VKDLDKNSLVPNASTYSALI 445
           ++++       + ST + L+
Sbjct: 548 LEEMLARGFSVDVSTTTLLV 567



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/246 (26%), Positives = 110/246 (44%)

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           +++NT  S   +   L  A+   N M      P+ + FN L+    K         +  +
Sbjct: 36  SSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 95

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M +  + P+V T   +IN    +   +   S   ++L+ G + D  T+  LI GLC EGK
Sbjct: 96  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 155

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A +L   +      PN  TY  LI G C   N+  A +L +SM +  C+PN  +F  
Sbjct: 156 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFST 215

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+ + C++     A  +  EM+ K ++P+ +  + L  GL    + +    L  +M    
Sbjct: 216 LIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK 275

Query: 539 LLPKGF 544
           ++P  F
Sbjct: 276 IMPDVF 281


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 223/436 (51%), Gaps = 4/436 (0%)

Query: 92  SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
           +D K +  + + L P  V  VL+++++D  L+L+FF W +T     LT E++ +++HIL 
Sbjct: 81  NDPKFVRFIDSSLGPIWVSRVLVELKQDPKLALKFFRWAKTKFGFCLTTESYCLLVHILF 140

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR-MCDSSPLVFDLLFKTYAHRKKFR 210
             R +  +   L+ ++ S    LP      +L+S R +C     VFD LF  +       
Sbjct: 141 YARMYFDANFFLKELISSRRI-LPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLE 199

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A   F +M  +   P   SCN FL  L  + + D++  F+++M    I+ +V+T N+++
Sbjct: 200 EAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMI 259

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
              CK G +  A  +F  M+ MG  P + TYN+LI G+   GLL  +      M+  G +
Sbjct: 260 GYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCE 319

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+VIT+N LI  FCK  ++ +A     EMK + + PNVVTY+TLI+   +    +     
Sbjct: 320 PDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKF 379

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M R G+  +  TY +LI   CK G    A  L  ++ +  +  N  TY+ L+ G C 
Sbjct: 380 LLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCK 439

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                 A  L+++MI++G  PN   +  L+    +N+  + A E+L E+ EK + PD ++
Sbjct: 440 EGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLL 499

Query: 511 LSELYSGLHHCGKDEL 526
              +  GL  C +++L
Sbjct: 500 YGTIIWGL--CSQNKL 513



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR--RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           N FL  L+ S R+      ++ +   RN   P     + +   F +LG++E A + F  M
Sbjct: 149 NFFLKELISSRRILPGFDVFEVLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRM 208

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                 P   + N  +      G   L+ KF   M   GI  +V T+N +I   CK+G +
Sbjct: 209 TRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDM 268

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  +F +MK   ++P++VTYN+LI+GYG++G  +    L+EEM   G + D++TYNAL
Sbjct: 269 VTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNAL 328

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I   CK  +  KA + + ++  + L PN  TYS LI   C     ++A +    M R G 
Sbjct: 329 INCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGL 388

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            PN+  +  L+   C+      A ++  EML+  +  + +  + L  GL   G+   A  
Sbjct: 389 SPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAED 448

Query: 530 LFRKMEIRGLLP 541
           LFR M   G+ P
Sbjct: 449 LFRAMIKAGVTP 460



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 168/332 (50%), Gaps = 4/332 (1%)

Query: 214 DTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           ++FC   +M+D G  P + + N  ++     E++  A  F  EM+ + + PNV T + ++
Sbjct: 305 ESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLI 364

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            A CK  ++++A++   +M  +G  P+  TY +LI  +C  G LS A+K  + M +  + 
Sbjct: 365 DALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVG 424

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            NV+T+ TL+ G CK+G++ EA  +F  M    V+PN+ TY  L++G+ +    E    L
Sbjct: 425 FNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALEL 484

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +E+    IK D+L Y  +I GLC + K ++  +++ ++    +  N+  Y+  +     
Sbjct: 485 LKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFK 544

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI- 509
              +  A  L + M   G       F +L+   C+    + A +    M +  + P+++ 
Sbjct: 545 TGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVA 604

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + L  GL      E A KLF +M+ + ++P
Sbjct: 605 VCTALIDGLCKNNYIEAAKKLFDEMQDKNMVP 636



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 174/387 (44%), Gaps = 2/387 (0%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           K +S  + L  +  +   DL +K F  ++ +      S   ++++            A  
Sbjct: 216 KARSCNAFLYRLAKTGKGDLSNKFFRDMVGA--GIAQSVFTYNIMIGYMCKEGDMVTAKS 273

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F QM+  G  P I + N  +        +D +   ++EM+     P+V T N +++ FC
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K   + +A      M++ G  P+V TY+TLI   C + +L  A+KF   M + G+ PN  
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ +LI   CK G L +A ++  EM    V  NVVTY TL++G  + G       L+  M
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ G+  ++ TY AL+ G  K  + + A  L+K++ +  + P+   Y  +I G C +   
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E    +   M   G R N  I+ + M  + +      A  +L EM +  +    +    L
Sbjct: 514 EECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVL 573

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             GL   G  E A+  F +M    L P
Sbjct: 574 IDGLCKKGLVEEAIDYFARMADFNLQP 600



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 169/389 (43%), Gaps = 36/389 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + ++ L   +   ++   A     +M++ G  P + + +  + +L     +  A+
Sbjct: 318 CEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAI 377

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F  +MRR  +SPN +T   ++ A CK G +  A+++   M  +    +V TY TL+ G 
Sbjct: 378 KFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGL 437

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITF-------------------------------- 336
           C +G +  A      M K G+ PN+ T+                                
Sbjct: 438 CKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDL 497

Query: 337 ---NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
               T+I+G C + KL E   + SEMKA  +  N V Y   ++ Y + G +    +L +E
Sbjct: 498 LLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQE 557

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALITGQCVRK 452
           M   G++V I+T+  LI GLCK+G  ++A  Y  +  D N    N +  +ALI G C   
Sbjct: 558 MCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNN 617

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A +L+  M      P+K  +  L+    +++DF  A  +   M E  M  D    +
Sbjct: 618 YIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYT 677

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  GL      + A     +M  +G++P
Sbjct: 678 SLVWGLSQGNLVQQARMFLNEMIGKGIVP 706



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 96/219 (43%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L   F + G L EA + FS M    V P   + N  +    + G  +
Sbjct: 175 RNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGD 234

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           +    + +M+  GI   + TYN +I  +CKEG    A  L   + +  L P+  TY++LI
Sbjct: 235 LSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLI 294

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       + +F L++ M   GC P+   +  L++ FC+ E   +A   L EM    + 
Sbjct: 295 DGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLK 354

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P+ +  S L   L      + A+K    M   GL P  F
Sbjct: 355 PNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 1/296 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A D F  M   G  P +++    +   + ++RV+ AL   KE++  +I P++    
Sbjct: 442 RMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYG 501

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   C    +E    V   M++ G   +   Y   +  +   G    A+     M   
Sbjct: 502 TIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDL 561

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN-VVTYNTLINGYGQVGNSEM 386
           G++  ++TF  LI G CKKG + EA   F+ M   N+ PN V     LI+G  +    E 
Sbjct: 562 GVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEA 621

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L++EM    +  D + Y ALI G  K    ++A  +   + +  +  +   Y++L+ 
Sbjct: 622 AKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVW 681

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           G       ++A      MI  G  P++ +   L+  + +    D A E+  E+L+K
Sbjct: 682 GLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLKK 737



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 13/218 (5%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +S++Y+ RM        D  FKT     K   A +   +M D G    I +    +  L 
Sbjct: 531 NSVIYTIRM--------DAYFKT----GKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLC 578

Query: 240 DSERVDIALGFYKEMRRNRISPN-VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               V+ A+ ++  M    + PN V     ++   CK   IE A ++F  M+    +P  
Sbjct: 579 KKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDK 638

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
             Y  LI G+        A+  ++ M + G++ ++  + +L++G  +   + +A    +E
Sbjct: 639 IAYTALIDGNLKHKDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNE 698

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           M    + P+ +    L+  Y ++G+ +    L++E+L+
Sbjct: 699 MIGKGIVPDEILCIRLLRKYYELGSIDEAIELHDELLK 736


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 224/440 (50%), Gaps = 24/440 (5%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGIL------DSDSFDLPSKLFDSILYSYRMCD 190
           S +++    V+++L          ++LR I+      + D+F+L    F  +L S +   
Sbjct: 121 SRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFEL----FPILLESPKDAA 176

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
            S +VFDLL K +A      NA D F Q +  G      SCN  L  L ++ R +     
Sbjct: 177 RSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSL 236

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIE------RAVEVFKNMESMGFIPSVTTYNTL 304
           ++EM+     PNV+T  ++M+ +CK    E      +A E+ + ME  G  P+V TY+T 
Sbjct: 237 FEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTY 296

Query: 305 ISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           I G C  G +  A+ F ++L+  NG+  NV  +N +I G CKKG+L EA ++  EMK+  
Sbjct: 297 IYGLCRVGYVESALDFVRSLISANGL-VNVYCYNAIIHGLCKKGELDEALKVLEEMKSCG 355

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +SP+V TY+ LI+G+ + G+ E G  L EEM  + ++  +++Y++L  GLCK+  +  + 
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + +DL       + + YS LI G C++ + + A +L + M+R+   P+   FE L+  F
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           C+   +  A E    MLE  + P     + +     HC  G+ E A+ L  +M+ +G+ P
Sbjct: 476 CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDA--HCREGRVEEALNLMNEMQTQGIFP 533

Query: 542 KGFDKLRTIN--CAPENGEK 559
             F     IN  C     E+
Sbjct: 534 NLFTYNAVINRLCKERKSER 553



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 159/298 (53%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A    +EM RN ++P+      ++H FCK+G+   A+E F  M   G +PS+ T N 
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I  HC +G +  A+   N M+  GI PN+ T+N +I   CK+ K   A  +F  M   N
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V P+VV Y+TLI+G+ +  NS+    LY  ML+ G+  D++ Y  LI  LC   +  +A 
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L K + +N + P+  +Y+++I G C   +  +A+ L+  M++ G  P    +  L+  +
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+    D A  ++ EM  K + PD +  + L +     G  + A+++  +M+  G+LP
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLP 743



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 164/345 (47%), Gaps = 35/345 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER---------- 281
           N  +  L     +D AL   +EM+   ISP+VYT ++++H FCK G +E+          
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 282 -------------------------AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
                                    ++++F+++ + G+    T Y+ LI G C +G L  
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A K    M +N + P+   F +L+ GFCK G    A   F+ M    + P++ T N +I+
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + + G  E   +L  EM   GI  ++ TYNA+I  LCKE K+++A  L   + K +++P
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   YS LI G   + NS++A  LY  M++ G  P+   + +L++  C       A  + 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +M E  M PD I  + + +G    G    A  LF +M  RG LP
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 159/318 (50%), Gaps = 2/318 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G       D   KL + ++ +    D  P  F+ L   +     + NA + F  M +
Sbjct: 436 LIKGFCMQGDLDSAHKLMEEMVRNNLAPD--PSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G LP I +CN  + +     RV+ AL    EM+   I PN++T N V++  CK    ER
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+E+F  M     +PSV  Y+TLI G   +     A+     M K G+ P+++ +  LI 
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C + ++ EA  +F +M    ++P+ ++Y ++I G+ ++G+     +L+ EML+ G   
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            ++TY +L+ G CK  +   A  L+ ++ +  + P+  TY+ LI     R N ++A ++ 
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733

Query: 462 KSMIRSGCRPNKHIFEML 479
             M  +G  P+   + ML
Sbjct: 734 NEMKENGVLPDHMTYMML 751



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 179/383 (46%), Gaps = 6/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNATDTFCQ 218
           +I+ G+      D   K+ + +    + C  SP V+   +L   +  +           +
Sbjct: 330 AIIHGLCKKGELDEALKVLEEM----KSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEE 385

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+     P + S +     L      DI+L  ++++       +    ++++  FC  G 
Sbjct: 386 MKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGD 445

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A ++ + M      P  + + +L+ G C  GL   A++F N+M + GI P++ T N 
Sbjct: 446 LDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNV 505

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I   C++G++ EA  + +EM+   + PN+ TYN +IN   +   SE    L+  ML+  
Sbjct: 506 IIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRN 565

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   ++ Y+ LI G  K+  ++KA  L   + K  + P+   Y+ LI   C R     A+
Sbjct: 566 VLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAY 625

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+K M  +G  P+K  +  +++ FC+  D  +A  +  EML++   P  +  + L  G 
Sbjct: 626 NLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGY 685

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + ++A  L  +M+ +G+ P
Sbjct: 686 CKMNRIDIADMLIDEMKRKGITP 708



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/237 (21%), Positives = 92/237 (38%), Gaps = 41/237 (17%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +VI F+ LI  F     L  A  +F + K T +  +  + N L+    +    E   SL+
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 392 EEMLRNGIKVDILTYNALILGLCK------EGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           EEM   G   ++ TY  ++   CK      +  T++A  +++++++N   P   TYS  I
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C     E A    +S+I +    N + +  ++   C+  + D A             
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEA------------- 344

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
                                 +K+  +M+  G+ P  +     I+   + G+ E G
Sbjct: 345 ----------------------LKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 198/381 (51%), Gaps = 2/381 (0%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR-MCDSSPLVFD 197
           T E++ I++HIL   R +  + +IL+ ++ S S+ LP      IL++ R +C     VFD
Sbjct: 8   TTESYCILVHILFYARMYFHANNILKELVLS-SWVLPGSDVFEILWTTRNVCVPGFGVFD 66

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            LF           A   F +M  +  LP   SCN FL  L  +   D++  F+++M   
Sbjct: 67  ALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGA 126

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I+P V+T N+++   CK G +  A  +F+ M+ MG  P + TYNTLI G+   GLL  +
Sbjct: 127 GIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDES 186

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +     M+  G +P+VIT+N LI  FCK   +  A   F EMK  ++ PNV++Y+TLI+ 
Sbjct: 187 VCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDA 246

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G  +M    + +M R G+  +  TY++LI   CK G   +A  L  ++ +  +  N
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ L+ G C       A +L+++M ++G  PN   +  L+    +    D+A E+  
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 498 EMLEKCMAPDSIILSELYSGL 518
           EM EK + PD ++   +  GL
Sbjct: 367 EMREKDIKPDILLWGTIVWGL 387



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 181/388 (46%), Gaps = 35/388 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + ++ L  ++   K    A + F +M+D    P + S +  + +L     + +A+
Sbjct: 198 CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257

Query: 249 GFYKEMRRNRISPNVYT------------------------------LNMV-----MHAF 273
            F+ +M R  + PN +T                              LN+V     +   
Sbjct: 258 KFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGL 317

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+ G++  A E+F+ M   G  P++  Y  LI GH     +  AM+  N M +  I+P++
Sbjct: 318 CEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDI 377

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + T+++G C + KL E   I +EMK + +  N V Y TL++ Y + GN     +L EE
Sbjct: 378 LLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEE 437

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G +V ++T+ ALI GLCK G  ++A Y    +  + L PN + Y+ALI G C    
Sbjct: 438 MRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNC 497

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A +L+  M      P+K  +  ++    ++ +F  A  +  +M+E  +  D    + 
Sbjct: 498 IGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTS 557

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  GL  CG+ + A K   +M  +G++P
Sbjct: 558 LVWGLSQCGQVQQARKFLAEMIGKGIIP 585



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 175/381 (45%), Gaps = 35/381 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y        +   F +M+  G  P + + N  ++S    + +  A  F++E
Sbjct: 168 VTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFRE 227

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   + PNV + + ++ A CK G+++ A++ F +M  +G +P+  TY++LI  +C  G 
Sbjct: 228 MKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGN 287

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    + M +  +  N++T+ TL+ G C++G ++EA  +F  M    V+PN+  Y  
Sbjct: 288 LGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTA 347

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ +V + +    L+ EM    IK DIL +  ++ GLC E K ++   ++ ++ ++ 
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESG 407

Query: 434 LVPN-----------------------------------ASTYSALITGQCVRKNSERAF 458
           +  N                                     T+ ALI G C R   + A 
Sbjct: 408 IGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAI 467

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +  M     +PN  ++  L+   C+N     A ++  EM +K M PD I  + +  G 
Sbjct: 468 YYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGN 527

Query: 519 HHCGKDELAMKLFRKMEIRGL 539
              G  + A+ +  KM   G+
Sbjct: 528 LKHGNFQEALNMRNKMMEMGI 548



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 174/389 (44%), Gaps = 6/389 (1%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNA 212
           K +S  + L  +  +   DL    F  ++ +      +P VF  +++            A
Sbjct: 96  KARSCNAFLHRLSKAGEGDLSRDFFRDMVGA----GIAPTVFTYNIMIGHVCKEGDMLTA 151

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              F QM+  G  P I + N  +        +D ++  ++EM+     P+V T N ++++
Sbjct: 152 RSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINS 211

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           FCK   + RA E F+ M+     P+V +Y+TLI   C +G++ +A+KF   M + G+ PN
Sbjct: 212 FCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPN 271

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+++LI   CK G L EA  +  EM   +V  N+VTY TL++G  + G       L+ 
Sbjct: 272 EFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFR 331

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            M + G+  ++  Y ALI G  K     KA  L  ++ +  + P+   +  ++ G C   
Sbjct: 332 AMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSES 391

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E    +   M  SG   N  I+  LM  + +  +   A  +L EM +       +   
Sbjct: 392 KLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFC 451

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  GL   G  + A+  F +M    L P
Sbjct: 452 ALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 126/257 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F +MR+    P I      +  L    +++       EM+ + I  N      +M 
Sbjct: 361 AMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMD 420

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A+ K G    A+ + + M  +G   +V T+  LI G C +GL+  A+ +   M  + +QP
Sbjct: 421 AYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQP 480

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV  +  LI G CK   + +A ++F EM+  N+ P+ + Y  +I+G  + GN +   ++ 
Sbjct: 481 NVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMR 540

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M+  GI++D+  Y +L+ GL + G+ ++A   + ++    ++P+ +  + L+      
Sbjct: 541 NKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYEL 600

Query: 452 KNSERAFQLYKSMIRSG 468
            N + A +L   ++  G
Sbjct: 601 GNIDEAIELQNELVEKG 617



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 2/233 (0%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L     + G L  A + F  M    V P   + N  ++   + G  +
Sbjct: 55  RNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGD 114

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           +    + +M+  GI   + TYN +I  +CKEG    A  L + + K  L P+  TY+ LI
Sbjct: 115 LSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLI 174

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       + +  L++ M   GC P+   +  L+++FC+ +   RA E   EM +K + 
Sbjct: 175 DGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLK 234

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF--DKLRTINCAPEN 556
           P+ I  S L   L   G  ++A+K F  M   GLLP  F    L   NC   N
Sbjct: 235 PNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGN 287



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/209 (21%), Positives = 93/209 (44%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++P+++  L   Y        A +   +MRD G    + +    +  L     V  A+ +
Sbjct: 410 ANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYY 469

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +  M  + + PNV     ++   CK   I  A ++F  M+    IP    Y  +I G+  
Sbjct: 470 FGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLK 529

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G    A+  +N M + GI+ ++  + +L++G  + G++ +A +  +EM    + P+   
Sbjct: 530 HGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETL 589

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGI 399
              L+  + ++GN +    L  E++  G+
Sbjct: 590 CTRLLRKHYELGNIDEAIELQNELVEKGL 618


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 183/370 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ + K     ++F  A + F  M      P + S N  +        V+ A+ FYKE
Sbjct: 228 VTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKE 287

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M++  ++P+V + + ++  F   G ++ A    + M+ +G +P    Y  +I G C  G 
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A++ ++ M   G  P+V+T+NTL+ G CK+ +L +A  + +EMK   V+P++ T+ T
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E    L++ +L   ++ D++ YN+LI G+C++G   KA  L  D+    
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TYS LI   C +   E AF     M+  G  PN   +  ++  +C++ +  +  
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           + L +M++  + PD I  + L  G         A  +F  ME   + P        IN  
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587

Query: 554 PENGEKESGG 563
            E G  E  G
Sbjct: 588 SEQGNMEEAG 597



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 198/393 (50%), Gaps = 6/393 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQ 218
           S+L+G+     FD   ++F ++      C  +P V  F++L   +    +   A   + +
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRAM----DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKE 287

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + S +  +       ++D A  + +EM+   + P+     MV+  FC+ G 
Sbjct: 288 MQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+ V   M  +G +P V TYNTL++G C +  L  A +  N M++ G+ P++ TF T
Sbjct: 348 MSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTT 407

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+C+ G   +A ++F  +    + P+VV YN+LI+G  + G+      L+++M    
Sbjct: 408 LIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  + +TY+ LI   C++G+ ++A   + ++     +PN  TY+++I G C   N ++  
Sbjct: 468 IFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQ 527

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q  + M++    P+   F  L+  + + E+   A  V   M ++ + PD++  + + +G 
Sbjct: 528 QFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGF 587

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
              G  E A ++F+KM   G+ P  +  +  IN
Sbjct: 588 SEQGNMEEAGRVFKKMGASGIEPDRYTYMSLIN 620



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 176/364 (48%), Gaps = 9/364 (2%)

Query: 185 SYRMCDSS-----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +YR+  SS         +++  +Y    +F  A     +M      P + + N  + +  
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  VD A+     M    + P + T N V+   CK    ++A EVF+ M+     P V 
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           ++N LI G C  G +  AMKF   M++ G+ P+V++F+ LI  F  +GK+  A     EM
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           K   + P+ V Y  +I G+ + G+      + +EM+  G   D++TYN L+ GLCK+ + 
Sbjct: 324 KGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRL 383

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L+ ++ +  + P+  T++ LI G C   N E+A QL+ +++    RP+   +  L
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSL 443

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIR 537
           +   C+  D  +A E+  +M  + + P+ +  S L     HC  G+ E A     +M  +
Sbjct: 444 IDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDS--HCEKGQVEEAFGFLDEMVSK 501

Query: 538 GLLP 541
           G LP
Sbjct: 502 GNLP 505



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 175/350 (50%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P VFDLL +TY   +K R A + F  + D+       + N  L++L  +    +A   Y
Sbjct: 86  QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAY 145

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +  +    N YTLN+++H++CK    ++A  V   ME     P V T+N LI      
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A+   + M   G++P ++TFN+++ G CK  +  +A  +F  M   +V+P+V ++
Sbjct: 206 GDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSF 265

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI G+ +VG  E     Y+EM + G+  D+++++ LI      GK   AA  ++++  
Sbjct: 266 NILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG 325

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+   Y+ +I G C   +   A ++   M+  GC P+   +  L++  C+      
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A E+L EM E+ + PD    + L  G    G  E A++LF  +  + L P
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRP 435



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 155/291 (53%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP + + N  L+ L    R+  A     EM+   ++P++ T   ++H +C+ G
Sbjct: 357 EMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDG 416

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             E+A+++F  +      P V  YN+LI G C KG L+ A +  + M    I PN +T++
Sbjct: 417 NFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYS 476

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++ EA     EM +    PN++TYN++I GY + GN + G    ++M+++
Sbjct: 477 ILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQD 536

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  D++T+N LI G  KE     A  +   ++K  + P+A TY+ +I G   + N E A
Sbjct: 537 NILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEA 596

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +++K M  SG  P+++ +  L++      +   A ++  EM+ +  APD 
Sbjct: 597 GRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 145/284 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L      + +  +A +   +M++ G  P + +    +         + AL
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKAL 422

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  +   R+ P+V   N ++   C+ G + +A E++ +M +    P+  TY+ LI  H
Sbjct: 423 QLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSH 482

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M   G  PN++T+N++I G+C+ G + +  +   +M   N+ P++
Sbjct: 483 CEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDL 542

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+NTLI+GY +  N     +++  M +  ++ D +TYN +I G  ++G  ++A  + K 
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKK 602

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +  + + P+  TY +LI G     NS+ AFQL+  M+  G  P+
Sbjct: 603 MGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 95/199 (47%)

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G  H A   +  + +++   N  T N +++ Y +    +   ++  EM +  +  D++
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+N LI    + G    A  LV  +    L P   T+++++ G C  +  ++A +++++M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
            +    P+   F +L+  FC+  + + A +   EM ++ + PD +  S L       GK 
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313

Query: 525 ELAMKLFRKMEIRGLLPKG 543
           + A    R+M+  GL+P G
Sbjct: 314 DHAAAYLREMKGLGLVPDG 332


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 192/374 (51%), Gaps = 9/374 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + + + ++        +   AT  F +M+  G +P   + N  ++      +V  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM+ + ++PNV T + V+H FC+   ++ A ++F+ M   G +P++ TYNTL+SG 
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  GL+  A +  + M + G+QP+  +++TL+ G CK GK+  A ++F +    +  P+V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y+TLI G  + G  +    L+E+M  N  + D++T+ AL+ GLCK  + ++A  +++ 
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++  +  PN  TYS+LI G C       A +++K MI  G  PN   +  L+  FC    
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR---------GL 539
            D A  ++ EM      PD I  + L  GL   G+   A +LF  M+ +           
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 362

Query: 540 LPKGFDKLRTINCA 553
           L  GF KL  I+ A
Sbjct: 363 LIGGFCKLERIDMA 376



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 188/378 (49%), Gaps = 2/378 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S ++++ G+  +   D+  K+F+    S   C    + +  L        +   A   F 
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFED--NSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR+    P + +    +  L   +R+  A    + M     +PNV T + ++   CK G
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTG 266

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A EVFK M   G  P+V TYN+LI G C    +  A+     M   G  P++IT+N
Sbjct: 267 QVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYN 326

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G CK G+  EANR+F +MKA   +P+V+TY+ LI G+ ++   +M  +L+++ML+ 
Sbjct: 327 TLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQ 386

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++T++ L+ G C  G    A  L++++  +   P+  TY++L+ G C       A
Sbjct: 387 AVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEA 446

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++ K M + GC+PN   +  L+  FC+      A ++L EM+   + P+ I    L  G
Sbjct: 447 RRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGG 506

Query: 518 LHHCGKDELAMKLFRKME 535
               G  E A K+  ++E
Sbjct: 507 FCGTGDLEEARKMLERLE 524



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 175/341 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + K   A   F QM + G +P + + N  LS L  +  +D A     E
Sbjct: 78  VTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 137

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+ ++ + +M   CK G I+ A++VF++  +    P V  Y+TLI+G C  G 
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K    M +N  +P+V+TF  L+ G CK  +L EA ++   M+  N +PNV+TY++
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       +++ M+  GI+ +++TYN+LI G C       A  L++++    
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +P+  TY+ LI G C    +  A +L+  M    C P+   +  L+  FC+ E  D A 
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  +ML++ + PD +  S L  G  + G  + A +L  +M
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEM 418



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 178/381 (46%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   KLF  ++ +   C  + + ++ L            A +   +MR
Sbjct: 82  TVIHGFCRQTKVDTAYKLFRQMVENG--CMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 139

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   S +  ++ L  + ++D+AL  +++       P+V   + ++   CK G ++
Sbjct: 140 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLD 199

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F+ M      P V T+  L+ G C    L  A +    ME     PNVIT+++LI
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 259

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G++ +A  +F  M    + PNVVTYN+LI+G+      +    L EEM   G  
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+TYN LI GLCK G+  +A  L  D+      P+  TYS LI G C  +  + A  L
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTL 379

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M++    P+   F  L+  +C     D A  +L EM+    +PD    + L  G   
Sbjct: 380 FDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCK 439

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+   A ++ ++M  RG  P
Sbjct: 440 VGRMVEARRVLKRMAKRGCQP 460



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 180/381 (47%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+  +   D   +L D +    R        +D L        K   A   F    
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEM--RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +    P + + +  ++ L  + R+D A   +++MR N   P+V T   +M   CK   ++
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +V + ME     P+V TY++LI G C  G +  A +    M   GI+PNV+T+N+LI
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC    +  A  +  EM AT   P+++TYNTLI+G  + G +     L+ +M      
Sbjct: 295 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 354

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TY+ LI G CK  +   A  L  D+ K +++P+  T+S L+ G C     + A +L
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M+ S C P+ + +  L+  FC+      A  VL  M ++   P+ +  + L      
Sbjct: 415 LEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCR 474

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            GK  +A KL  +M   G+ P
Sbjct: 475 AGKPTVAYKLLEEMVGNGVQP 495



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 184/379 (48%), Gaps = 7/379 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   D      ++ +++    R C  + + +  L        + R+A + F +M 
Sbjct: 222 ALMDGLCKGDRLQEAQQVLETM--EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI 279

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + N  +     +  VD AL   +EM      P++ T N ++   CK G   
Sbjct: 280 VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAP 339

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F +M++    P V TY+ LI G C    + +A    + M K  + P+V+TF+TL+
Sbjct: 340 EANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLV 399

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C  G + +A R+  EM A++ SP+V TY +L++G+ +VG       + + M + G +
Sbjct: 400 EGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQ 459

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++TY ALI   C+ GK   A  L++++  N + PN  TY +LI G C   + E A ++
Sbjct: 460 PNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKM 519

Query: 461 YKSMIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            + + R   C+ +   + ++M   C+      A E+L  + +    P   I   L  GL 
Sbjct: 520 LERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL- 578

Query: 520 HCGKDEL--AMKLFRKMEI 536
            C   EL  AM++  +M +
Sbjct: 579 -CQGKELGKAMEVLEEMTL 596



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 132/261 (50%), Gaps = 2/261 (0%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ER+D+A   + +M +  + P+V T + ++  +C  G+++ A  + + M +    P V TY
Sbjct: 371 ERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            +L+ G C  G +  A +    M K G QPNV+T+  LI  FC+ GK   A ++  EM  
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTK 420
             V PNV+TY +LI G+   G+ E    + E + R+   K D+  Y  ++ GLC+ G+  
Sbjct: 491 NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEML 479
            A  L++ + ++   P    Y ALI G C  K   +A ++ + M  S   RPN   +E +
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610

Query: 480 MSTFCQNEDFDRAAEVLLEML 500
           +    +    + A  +  E+L
Sbjct: 611 IQELAREGRHEEANALADELL 631



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 8/241 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL--LFKTYAHRKKFRNATDTFCQ 218
           +++ G  ++   D   +L + ++ S    D SP V+    L   +    +   A     +
Sbjct: 397 TLVEGYCNAGLVDDAERLLEEMVAS----DCSPDVYTYTSLVDGFCKVGRMVEARRVLKR 452

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + +    + +   + +  +A    +EM  N + PNV T   ++  FC  G 
Sbjct: 453 MAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGD 512

Query: 279 IERAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           +E A ++ + +E        +  Y  ++ G C  G +S A++    ++++G  P    + 
Sbjct: 513 LEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 572

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVS-PNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            LI G C+  +L +A  +  EM  +  S PN   Y  +I    + G  E   +L +E+L 
Sbjct: 573 ALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLG 632

Query: 397 N 397
           N
Sbjct: 633 N 633


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 219/448 (48%), Gaps = 7/448 (1%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           +S  L P  V+ VL++   D  L+L FF ++  HK    +  +  I++H L ++  +  +
Sbjct: 53  ISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPA 112

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
            S+L+ +L       P  LF+S L SYR C+ S+ L FDLL +TY   ++  +       
Sbjct: 113 SSLLQTLLLRGLN--PEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRL 170

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D G LP I + +  L+ L+   +  +AL  + E+  + + P+VY    V+ + C+L  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             RA EV   MES G   SV TYN  I G C    +  A++ KNL+   G++ +V T+ T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK  +      + +EM      P+    + L++G  + GN      L  ++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   +  YNALI  +CK+GK  +A  L  ++    L PN  TYS LI   C R   + A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                M   G +   + +  L+S  C+      A  +  EM+   + P+ +I + L SG 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG- 469

Query: 519 HHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            +C + EL  A +L+ +M  +G+ P  +
Sbjct: 470 -YCKEGELHNAFRLYHEMTGKGISPNTY 496



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 19/422 (4%)

Query: 118 KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK 177
           KD++ + E    +++     L++ T+++ +  L KN++   +  I               
Sbjct: 229 KDFIRAREVIGRMES-SGCDLSVATYNVFIRGLCKNQRVWEAVEIKN------------- 274

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
                L SY+   +    +  L       ++F    +   +M ++GF+P   + +  +  
Sbjct: 275 -----LLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L     +  A     ++++  ++P+++  N ++++ CK G ++ A  +F NM   G  P+
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TY+ LI   C +G L +A+ F   M + GI+  V  +++LI G CK GKL  A  +F 
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM A  + PNVV Y +LI+GY + G       LY EM   GI  +  T+ ALI GLC   
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +  +A  L  ++ + +++PN  TY+ LI G C   N+ RAF+L   M+  G  P+ + + 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+S  C       A E + ++  +    + +  S L  G    G+ + A+   R+M  R
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGR 629

Query: 538 GL 539
           G+
Sbjct: 630 GV 631



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/338 (30%), Positives = 170/338 (50%), Gaps = 2/338 (0%)

Query: 206 RKK--FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           RKK    +A D   +++ +G  P +   N  ++S+    ++D A   +  M    + PN 
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPND 390

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T ++++ +FCK G ++ A+     M  +G   +V  Y++LISGHC  G L  A    + 
Sbjct: 391 VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M  NG++PNV+ + +LI G+CK+G+LH A R++ EM    +SPN  T+  LI+G      
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                 L+ EM+   +  + +TYN LI G CKEG T +A  L+ ++ +  LVP+  TY  
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI+G C       A +    +     + N+  F  L+  +C+    D A +   EML + 
Sbjct: 571 LISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRG 630

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A D +  S L  G+         + L ++M  +GL P
Sbjct: 631 VAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 165/350 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S  V++ L  +     K   A   F  M   G  P   + +  + S     ++D+AL F 
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M    I   VY  + ++   CKLG +  A  +F  M + G  P+V  Y +LISG+C +
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A +  + M   GI PN  TF  LI G C   ++ EAN++F EM   NV PN VTY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI G+ + GN+     L +EM+  G+  D  TY  LI GLC  G+  +A   + DL  
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
                N   +SAL+ G C     + A    + M+  G   +   + +L+    + +D   
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRS 653

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++L +M ++ + PD+++ + +       G  ++A  L+  M   G LP
Sbjct: 654 IIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLP 703



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           + ++   +L G++    F +   LFD I+ S    D    V+  + ++    K F  A +
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDV--YVYTAVVRSLCELKDFIRARE 236

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              +M   G    + + N F+  L  ++RV  A+     +    +  +V T   ++   C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K+   E   E+   M   GF+PS    + L+ G   KG +  A    N ++K G+ P++ 
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI   CK GKL EA  +F+ M    + PN VTY+ LI+ + + G  ++      +M
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              GIK  +  Y++LI G CK GK + A  L  ++  N L PN   Y++LI+G C     
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             AF+LY  M   G  PN + F  L+S  C       A ++  EM+E  + P+ +  + L
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 515 YSGLHHC--GKDELAMKLFRKMEIRGLLPKGF 544
             G  HC  G    A +L  +M  +GL+P  +
Sbjct: 537 IEG--HCKEGNTVRAFELLDEMVEKGLVPDTY 566



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 158/366 (43%), Gaps = 10/366 (2%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +    K R A   F +M   G  P +      +S       +  A   Y EM    
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ISPN YT   ++   C    +  A ++F  M     IP+  TYN LI GHC +G    A 
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M + G+ P+  T+  LI G C  G++ EA    ++++      N + ++ L++GY
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGY 610

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +       EML  G+ +D++ Y+ LI G+ ++   +    L+K +    L P+ 
Sbjct: 611 CKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDN 670

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I       N + AF L+  M+  GC PN   +  L++  C+    D+A  +  E
Sbjct: 671 VLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 730

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRT 549
           ML     P+    +     L   G  E A++L   + + G L          +GF KL  
Sbjct: 731 MLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVL-LEGFLANTVTYNILIRGFCKLGR 789

Query: 550 INCAPE 555
           I  A E
Sbjct: 790 IQEAAE 795



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 174/417 (41%), Gaps = 69/417 (16%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  L   Y    +  NA   + +M   G  P   +    +S L  + R+  A   + E
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T N+++   CK G   RA E+   M   G +P   TY  LISG C+ G 
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS-------- 365
           +S A +F N ++    + N + F+ L+ G+CK+G+L +A     EM    V+        
Sbjct: 581 VSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSV 640

Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                                      P+ V Y T+I+   + GN +M   L++ M+  G
Sbjct: 641 LIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEG 700

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS---------------- 442
              +++TY ALI GLCK G   KA  L +++  ++ +PN +TY+                
Sbjct: 701 CLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAI 760

Query: 443 ------------------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
                              LI G C     + A ++  +MI SG  P+   +  ++  +C
Sbjct: 761 QLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 820

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  D   A ++   ML + + PD++  + L  G    G+   A +L   M  RG+ P
Sbjct: 821 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKP 877



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 159/359 (44%), Gaps = 36/359 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L + +        A +   +M + G +P   +    +S L  + RV  A  F  +
Sbjct: 531 VTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMND 590

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERA------------------------------- 282
           ++  +   N    + ++H +CK G ++ A                               
Sbjct: 591 LQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQD 650

Query: 283 ----VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
               +++ K M   G  P    Y T+I  +   G L +A    ++M   G  PNV+T+  
Sbjct: 651 RRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK G + +A  +  EM A+N  PN  TY   ++     GN E    L++ +L  G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 769

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              + +TYN LI G CK G+ ++AA ++ ++  + + P+  +YS +I   C R + + A 
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           +L++SM+  G  P+   +  L+   C   +  +A E+  +M+ + + P+    + L  G
Sbjct: 830 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 73/261 (27%), Positives = 136/261 (52%), Gaps = 9/261 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE----RVDIALG 249
           + + +L      ++  R+  D   QM D G  P     N   ++++D+      + +A G
Sbjct: 636 VCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD----NVLYTTMIDANAKAGNLKMAFG 691

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M      PNV T   +++  CK+G++++A  + + M +   +P+  TY   +    
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           ++G +  A++  +++ + G   N +T+N LI GFCK G++ EA  +   M  + +SP+ +
Sbjct: 752 SEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +Y+T+I  Y + G+ +    L+E ML  G+  D + YN LI G C  G+  KA  L  D+
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870

Query: 430 DKNSLVPNASTYSALITGQCV 450
            +  + PN +TY++LI G C+
Sbjct: 871 MRRGVKPNRATYNSLIHGTCL 891



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 103/225 (45%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + F+ LI  + +  +  +   +   M    + P + T + ++NG  ++    M   L++E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ++ +G++ D+  Y A++  LC+     +A  ++  ++ +    + +TY+  I G C  + 
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A ++   +   G R +   +  L+   C+ E+F+   E++ EM+E    P    +S 
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           L  GL   G    A  L  K++  G+ P  F     IN   ++G+
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 208/411 (50%), Gaps = 9/411 (2%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP- 193
           PS L    H I     TKN           G   S+S +  S + D++   YRM   +P 
Sbjct: 36  PSFLFFHRHHITTSTFTKNPSLPKKN----GGFASNSSNTIS-VDDALASFYRMARMNPR 90

Query: 194 ---LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
              + F     + A  K++        QM  +G    + S N  ++ L     VD A+  
Sbjct: 91  PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSV 150

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + +M +  I P+V T   +++  C  G I+ AVE++  M   G  P V +YNTLI+G CN
Sbjct: 151 WGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCN 210

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G  ++A+     ME+NG +PNV+T+NT+I   CK   +++A    SEM    + P+ +T
Sbjct: 211 SGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAIT 270

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN++++G   +G       L++ M +NG K D++TYN +I  L K+     AA  + ++ 
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + P+  TY+ ++ G C       A +L+K M + GC+P+   +  ++ + C++   +
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A E L EM+++ + P+++  S +  G  + G+ + A +LF++M  R ++P
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMP 441



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 203/384 (52%), Gaps = 2/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+ +S + ++   +F  +      C  + + ++ +  +    +   +A D   
Sbjct: 200 SYNTLINGLCNSGNTNMAVHVFKKM--EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLS 257

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   + N  +  L    +++ A   +K M +N   P+V T N+++ +  K  
Sbjct: 258 EMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++  A +    M   G  P V TY T++ G C  G L+ A++    ME+ G +P+V+ +N
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I   CK   +++A    SEM    + PN VTY+T+++G+  +G  +    L++EM+  
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  + LT++ L+ GLC+EG   +A ++ + + +  + PN  TY+AL+ G C+R     A
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++++ M+  GC P+ H + +L++ +C +   D+A  +L +M  K + P+++  + +  G
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L + G+   A +LF+KM   G+LP
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLP 581



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 180/393 (45%), Gaps = 41/393 (10%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   AT  F +M   G  P + + N  + SL     V+ A  F  EM    I P+V T  
Sbjct: 283 QLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYT 342

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++H  C LG +  A+ +FK ME  G  P V  YNT+I   C   L++ AM+F + M   
Sbjct: 343 TILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----------------------- 364
           GI PN +T++T++ GFC  G+L EA ++F EM   NV                       
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA 462

Query: 365 ------------SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                        PN+ TYN L+NGY           ++E M+  G   D+ +YN LI G
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C   +  KA  L+  +    L PN  TY+ ++ G C       A +L+K M  SG  P 
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +L++  C++   D A ++   M EK + PD I+ + L  G+   GK E+A  LF 
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFS 642

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
           K+   G+ P G    RT N   +   KE  GLS
Sbjct: 643 KLSADGIQPPG----RTYNVMIKGLLKE--GLS 669



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 135/291 (46%), Gaps = 26/291 (8%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-------- 328
            I   A+ V +    MG  P +  + + +  H +    S   K  +L +KNG        
Sbjct: 11  AIASSAIWVLQQHMEMGIFPFLPYFPSFLFFHRHHITTSTFTKNPSLPKKNGGFASNSSN 70

Query: 329 ------------------IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                              +P+++ F   +    K  +      + ++M    V+  V +
Sbjct: 71  TISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYS 130

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
            N LIN   ++ + +   S++ +M + GI+ D++T+  LI G+C EGK K A  L  ++ 
Sbjct: 131 LNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMV 190

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           ++   P+  +Y+ LI G C   N+  A  ++K M ++GC+PN   +  ++ + C++   +
Sbjct: 191 RSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVN 250

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A + L EM+ + + PD+I  + +  GL   G+   A +LF++ME  G  P
Sbjct: 251 DAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKP 301


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 178/327 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM   G  P I + + F++     +RVD+      ++ +  + P + T   +++  CK+G
Sbjct: 118 QMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVG 177

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
              +AVE+F +M + G  P V TYNT+I+G C  G  + A      ME+ G QPN++T++
Sbjct: 178 EFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYS 237

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI   C+   ++EA  IFS MKA  +SP++ TY +LI G  +    +  ++L  EM   
Sbjct: 238 TLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSL 297

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  DI+T+N L+   CKEGK  +A  ++K + +  + PN  TYS+L+ G  +  +   A
Sbjct: 298 NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEA 357

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+  MI  GC+PN   + +L++ +C+ +  D A ++  EM+ + + P+++  + L  G
Sbjct: 358 RKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHG 417

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               GK   A  LFR M   G LP  F
Sbjct: 418 FCQLGKLREAQDLFRNMCTNGNLPDLF 444



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 169/352 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L  +    +    A D F  M+  G  P I +    +  L    R   A 
Sbjct: 229 CQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEAS 288

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    I P++ T N+++  FCK G +  A+ V K M  MG  P+V TY++L+ G+
Sbjct: 289 ALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGY 348

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  A K  ++M   G +PN+ ++N LI G+CK  ++ EA ++F+EM    ++PN 
Sbjct: 349 SLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNN 408

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YNTLI+G+ Q+G       L+  M  NG   D+ TY+ L+ G CK+G   KA  L + 
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN   Y+ L+   C   N + A +L+  +   G +P+  ++  +++  C+   
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            D A E    M      PD I  + +  GL     +  A+ L  +M  RG +
Sbjct: 529 LDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFI 580



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 192/381 (50%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+     F    +LFD ++   + C      ++ +        +   A     +M 
Sbjct: 168 TLINGLCKVGEFAQAVELFDDMVA--KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKME 225

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + +  + SL     V+ AL  +  M+   ISP+++T   ++   CK    +
Sbjct: 226 EAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWK 285

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M S+  +P + T+N L+   C +G +S A+     M + G++PNV+T+++L+
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLM 345

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           +G+     + EA ++F  M      PN+ +YN LINGY +    +    L+ EM+  G+ 
Sbjct: 346 YGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + ++YN LI G C+ GK ++A  L +++  N  +P+  TYS L+ G C +    +AF+L
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +++M  +  +PN  ++ +L+   C++ +   A ++  E+  + + P   + + + +GL  
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G  + A++ FR ME  G  P
Sbjct: 526 EGLLDEALEAFRNMEADGCPP 546



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 162/329 (49%), Gaps = 3/329 (0%)

Query: 192 SPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP +F    L +      +++ A+    +M     +P I + N  + +     +V  ALG
Sbjct: 265 SPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALG 324

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             K M    + PNV T + +M+ +     +  A ++F  M + G  P++ +YN LI+G+C
Sbjct: 325 VLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYC 384

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  AM+  N M   G+ PN +++NTLI GFC+ GKL EA  +F  M      P++ 
Sbjct: 385 KAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLF 444

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+ L++G+ + G       L+  M    +K +++ Y  L+  +CK G  K A  L  +L
Sbjct: 445 TYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSEL 504

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L P+   Y+ +I G C     + A + +++M   GC P++  + +++    Q++D 
Sbjct: 505 FVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDE 564

Query: 490 DRAAEVLLEMLEKCMAPD-SIILSELYSG 517
            RA  ++ EM ++    D    LSE+  G
Sbjct: 565 SRALLLVGEMRDRGFIADVRPCLSEVCQG 593



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 47/104 (45%)

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K M   G  PN +   + M+ FCQ +  D    VL ++++  + P  +  + L +GL 
Sbjct: 115 LSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLC 174

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             G+   A++LF  M  +G  P  +     IN   + GE  +  
Sbjct: 175 KVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAA 218


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 180/322 (55%), Gaps = 1/322 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P + + N  L +L D+  +  A  F+  M  + ++PNVYT N+++ A C  G  + A
Sbjct: 118 GYAPSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + V ++M   G  P+  TYNTL++  C  G +  A +  ++M + G++PN++TFN+++ G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G++ +A ++F EM    ++P+ V+YNTL+ GY +VG S    S++ EM R GI  D
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+ +LI  +CK G  ++A  LV+++ +  L  N  T++ALI G C +   + A    +
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M +   +P+   +  L++ +C     D A E++ EM  K + PD +  S + S     G
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
               A +L ++M   G+LP   
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAI 438



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 179/346 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           CD + + ++ L   +    +   A      MR+ G  P + + N  ++ +  + R++ A 
Sbjct: 188 CDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDAR 247

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM +  ++P+  + N ++  +CK+G    A+ VF  M   G +P V T+ +LI   
Sbjct: 248 KVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVM 307

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A+     M + G+Q N ITF  LI GFCKKG L +A     EM+   + P+V
Sbjct: 308 CKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSV 367

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V YN LINGY  VG  +    L  EM   G+K D++TY+ ++   CK G T  A  L + 
Sbjct: 368 VCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQ 427

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +N ++P+A TYS+LI   C  K    A  L+K+MI  G +P++  +  L+   C+  +
Sbjct: 428 MLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGN 487

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +RA  +  EM++  + PD +  S L +GL    + + A +L  K+
Sbjct: 488 VERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/328 (32%), Positives = 173/328 (52%), Gaps = 4/328 (1%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F  M   G  P + + N  + +L        AL   ++MR     PN  T N ++ AFC+
Sbjct: 145 FDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCR 204

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++RA  +   M   G  P++ T+N++++G C  G +  A K  + M K G+ P+ ++
Sbjct: 205 AGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVS 264

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTL+ G+CK G  HEA  +F+EM    + P+VVT+ +LI+   + GN E    L  EM 
Sbjct: 265 YNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR 324

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G++++ +T+ ALI G CK+G    A   V+++ +  + P+   Y+ALI G C+    +
Sbjct: 325 ERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMD 384

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A +L + M   G +P+   +  ++S +C+N D   A ++  +MLE  + PD+I  S L 
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLI 444

Query: 516 SGLHHCGKDEL--AMKLFRKMEIRGLLP 541
             L  C +  L  A  LF+ M   GL P
Sbjct: 445 RVL--CEEKRLGDAHVLFKNMISLGLQP 470



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 176/350 (50%), Gaps = 7/350 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        +  +A   F +M   G  P   S N  +           AL  + E
Sbjct: 228 VTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAE 287

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  I P+V T   ++H  CK G +ERAV + + M   G   +  T+  LI G C KG 
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M +  IQP+V+ +N LI G+C  G++ EA  +  EM+A  V P+VVTY+T
Sbjct: 348 LDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +++ Y + G++     L ++ML NG+  D +TY++LI  LC+E +   A  L K++    
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY++LI G C   N ERA  L+  M+++G  P+   + +L++   ++     A 
Sbjct: 468 LQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ 527

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKD-EL--AMKLFRKMEIRGLL 540
            +L ++  +   P +I     Y  L  C ++ EL   + L +   ++GL+
Sbjct: 528 RLLFKLYHEEPVPANIK----YDALMRCCRNAELKSVLALLKGFCMKGLM 573



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 155/303 (51%), Gaps = 1/303 (0%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+V   N V+ A     +   A   F +M S G  P+V TYN L+   C +G    A+ 
Sbjct: 120 APSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 178

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M   G  PN +T+NTL+  FC+ G++  A R+   M+   + PN+VT+N+++NG  
Sbjct: 179 VLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGIC 238

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E    +++EM++ G+  D ++YN L+ G CK G + +A  +  ++ +  ++P+  
Sbjct: 239 KAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVV 298

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           T+++LI   C   N ERA  L + M   G + N+  F  L+  FC+    D A   + EM
Sbjct: 299 TFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREM 358

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
            +  + P  +  + L +G    G+ + A +L R+ME +G+ P        ++   +NG+ 
Sbjct: 359 RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDT 418

Query: 560 ESG 562
            S 
Sbjct: 419 HSA 421



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 167/321 (52%), Gaps = 24/321 (7%)

Query: 218 QMRDYGFLPIIES-CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           QM +  F  +I+  C K          +D AL   +EMR+ RI P+V   N +++ +C +
Sbjct: 329 QMNEITFTALIDGFCKKGF--------LDDALLAVREMRQCRIQPSVVCYNALINGYCMV 380

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A E+ + ME+ G  P V TY+T++S +C  G    A +    M +NG+ P+ IT+
Sbjct: 381 GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++LI   C++ +L +A+ +F  M +  + P+ VTY +LI+G+ + GN E   SL++EM++
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL------------ 444
            G+  D++TY+ LI GL K  +TK+A  L+  L     VP    Y AL            
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSV 560

Query: 445 ---ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
              + G C++     A ++Y+S++      +  ++ +L+   C+  +  +A     +ML+
Sbjct: 561 LALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620

Query: 502 KCMAPDSIILSELYSGLHHCG 522
              AP+S     L  GL   G
Sbjct: 621 CGFAPNSTSTISLIRGLFEKG 641



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 157/376 (41%), Gaps = 24/376 (6%)

Query: 170 DSFDLPSKLFDSILY--SYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D F     L D++L     R C   P V  ++ L   Y    +   A +   +M   G  
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK 399

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + +  LS+   +     A    ++M  N + P+  T + ++   C+   +  A  +
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVL 459

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           FKNM S+G  P   TY +LI GHC +G +  A+   + M K G+ P+V+T++ LI G  K
Sbjct: 460 FKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             +  EA R+  ++      P  + Y+ L+       N+E+ + L               
Sbjct: 520 SARTKEAQRLLFKLYHEEPVPANIKYDALMRC---CRNAELKSVL--------------- 561

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
             AL+ G C +G   +A  + + +   +   + S YS LI G C   N  +A   +K M+
Sbjct: 562 --ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQML 619

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G  PN      L+    +      A +V+ ++L  C   D+     L       G  +
Sbjct: 620 QCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVD 679

Query: 526 LAMKLFRKMEIRGLLP 541
             + +   M   GLLP
Sbjct: 680 AVLDVLHGMARDGLLP 695


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 174/352 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C SS +  ++L   Y    +         +M + GF P   + N  ++ L     V  AL
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+++T N ++   CKLG +E AVE+   M    F P+  TYNTLIS  
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A +   ++   GI P+V TFN+LI G C       A  +F EMK     P+ 
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYN LI+     G  E   SL +EM  +G   +++TYN LI G CK  + ++A  +  +
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++   +  N  TY+ LI G C  +  E A QL   M+  G +P+K  +  L++ FC+  D
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +AA+++  M      PDS+    L  GL   G+ ELA +L R ++++G++
Sbjct: 577 IKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMV 628



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 174/349 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K      + R A     +M  YG  P  ++    +   ++   ++ AL   ++M 
Sbjct: 214 FNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMV 273

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  T+N+++H +CK G IE  +     M + GF P   T+N+L++G C  G + 
Sbjct: 274 AAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVK 333

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++  ++M + G  P++ T+N+LIFG CK G++ EA  I ++M   + SPN VTYNTLI
Sbjct: 334 HALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLI 393

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   +    E    L   +   GI  D+ T+N+LI GLC     + A  L +++      
Sbjct: 394 STLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCH 453

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI   C R   E A  L K M  SGC  N   +  L+  FC+N+  + A E+
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             EM  + ++ + +  + L  GL    + E A +L  +M + GL P  F
Sbjct: 514 FDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKF 562



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 11/364 (3%)

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           FD  +++Y     + L+F L         +   A +   QM    F P   + N  +S+L
Sbjct: 347 FDPDIFTY-----NSLIFGL-----CKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               +V+ A    + +    I P+V T N ++   C       A+E+F+ M++ G  P  
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDE 456

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN LI   C++G L  A+     ME +G   NV+T+NTLI GFCK  ++ EA  IF E
Sbjct: 457 FTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDE 516

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M+   +S NVVTYNTLI+G  +    E  A L ++ML  G+K D  TYN+L+   C+ G 
Sbjct: 517 MELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGD 576

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            KKAA +V+ +  N   P++ TY  LI G       E A +L +++   G       +  
Sbjct: 577 IKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNP 636

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD-ELAMKLFRKMEIR 537
           ++    + +    A  +  EM+EK   PD++    ++ GL   G     A+    +M  +
Sbjct: 637 VIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696

Query: 538 GLLP 541
           G LP
Sbjct: 697 GFLP 700



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 176/356 (49%), Gaps = 3/356 (0%)

Query: 182 ILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           IL    + D SP  + ++ L  T     +   AT+    +   G LP + + N  +  L 
Sbjct: 373 ILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 432

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +    +A+  ++EM+     P+ +T NM++ + C  G +E A+ + K MES G   +V 
Sbjct: 433 LTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVV 492

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYNTLI G C    +  A +  + ME  GI  NV+T+NTLI G CK  ++ EA ++  +M
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               + P+  TYN+L+  + + G+ +  A + + M  NG + D +TY  LILGL K G+ 
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A+ L++ +    +V    TY+ +I      K +  A +L++ M+  G  P+   ++++
Sbjct: 613 ELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672

Query: 480 MSTFCQNED-FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               C        A + L+EM +K   PD      L  GL     ++  +KL  ++
Sbjct: 673 FRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRV 728



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/340 (29%), Positives = 157/340 (46%), Gaps = 8/340 (2%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVY 264
           R+  +    T C++R   FL +IES  KF       E  D A+     M     +  + +
Sbjct: 125 RRVLQEMKHTGCEIRRGTFLILIESYAKF-------ELFDEAVAVVDIMEEEFGLKLDAF 177

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N +++       ++    V   M S G  P VTT+N LI   C    +  A+     M
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G+ P+  TF TL+ GF ++G ++ A RI  +M A     + VT N L++GY + G  
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E   S  +EM   G + D  T+N+L+ GLC+ G  K A  ++  + +    P+  TY++L
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C     E A ++   MI     PN   +  L+ST C+    + A E+   +  K +
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 417

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            PD    + L  GL       LAM+LF +M+ +G  P  F
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEF 457



 Score = 42.0 bits (97), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 5/132 (3%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-IIER 281
           G +   ++ N  + +L   +R   A+  ++EM      P+  T  +V    C  G  I  
Sbjct: 626 GMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGE 685

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN-LMEKNGIQPNVITFNTLI 340
           AV+    M   GF+P  +++  L  G C   +    +K  N +M++     + +   ++I
Sbjct: 686 AVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV---SMI 742

Query: 341 FGFCKKGKLHEA 352
            GF K  K  +A
Sbjct: 743 MGFLKIRKFQDA 754


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 219/448 (48%), Gaps = 7/448 (1%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           +S  L P  V+ VL++   D  L+L FF ++  HK    +  +  I++H L ++  +  +
Sbjct: 53  ISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPA 112

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
            S+L+ +L       P  LF+S L SYR C+ S+ L FDLL +TY   ++  +       
Sbjct: 113 SSLLQTLLLRGLN--PEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRL 170

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D G LP I + +  L+ L+   +  +AL  + E+  + + P+VY    V+ + C+L  
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             RA EV   MES G   SV TYN  I G C    +  A++ KNL+   G++ +V T+ T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK  +      + +EM      P+    + L++G  + GN      L  ++ + G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   +  YNALI  +CK+GK  +A  L  ++    L PN  TYS LI   C R   + A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                M   G +   + +  L+S  C+      A  +  EM+   + P+ +I + L SG 
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG- 469

Query: 519 HHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            +C + EL  A +L+ +M  +G+ P  +
Sbjct: 470 -YCKEGELHNAFRLYHEMTGKGISPNTY 496



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 173/344 (50%), Gaps = 10/344 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++F    +   +M ++GF+P   + +  +  L     +  A     ++++  ++P+++  
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++++ CK G ++ A  +F NM   G  P+  TY+ LI   C +G L +A+ F   M +
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI+  V  +++LI G CK GKL  A  +F EM A  + PNVV Y +LI+GY + G    
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              LY EM   GI  +  T+ ALI GLC   +  +A  L  ++ + +++PN  TY+ LI 
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL---------L 497
           G C   N+ RAF+L   M+  G  P+ + +  L+S  C       A E +         L
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKL 598

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +E C+ P+ +  + L +GL   G  + A  L R+M     LP
Sbjct: 599 NEIEGCL-PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLP 641



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 180/394 (45%), Gaps = 46/394 (11%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S  V++ L  +     K   A   F  M   G  P   + +  + S     ++D+AL F 
Sbjct: 354 SLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFL 413

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M    I   VY  + ++   CKLG +  A  +F  M + G  P+V  Y +LISG+C +
Sbjct: 414 GKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKE 473

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A +  + M   GI PN  TF  LI G C   ++ EAN++F EM   NV PN VTY
Sbjct: 474 GELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTY 533

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-- 429
           N LI G+ + GN+     L +EM+  G+  D  TY  LI GLC  G+  +A   + DL  
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 430 ------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH--------- 474
                 +    +PN  TY+ALI G C     ++A  L + M+ S   PN++         
Sbjct: 594 EQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYL 653

Query: 475 -------------------------IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                                     + +L+  FC+      AAEVL+ M++  ++PD I
Sbjct: 654 TSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 713

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
             S +     +C + +L  A+KL+  M  RG+ P
Sbjct: 714 SYSTII--YEYCRRGDLKEAIKLWESMLNRGVNP 745



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 183/392 (46%), Gaps = 6/392 (1%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           + ++   +L G++    F +   LFD I+ S    D    V+  + ++    K F  A +
Sbjct: 179 QIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDV--YVYTAVVRSLCELKDFIRARE 236

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              +M   G    + + N F+  L  ++RV  A+     +    +  +V T   ++   C
Sbjct: 237 VIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLC 296

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K+   E   E+   M   GF+PS    + L+ G   KG +  A    N ++K G+ P++ 
Sbjct: 297 KVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLF 356

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI   CK GKL EA  +F+ M    + PN VTY+ LI+ + + G  ++      +M
Sbjct: 357 VYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKM 416

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              GIK  +  Y++LI G CK GK + A  L  ++  N L PN   Y++LI+G C     
Sbjct: 417 TEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGEL 476

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             AF+LY  M   G  PN + F  L+S  C       A ++  EM+E  + P+ +  + L
Sbjct: 477 HNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVL 536

Query: 515 YSGLHHC--GKDELAMKLFRKMEIRGLLPKGF 544
             G  HC  G    A +L  +M  +GL+P  +
Sbjct: 537 IEG--HCKEGNTVRAFELLDEMVEKGLVPDTY 566



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 160/332 (48%), Gaps = 9/332 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  L   Y    +  NA   + +M   G  P   +    +S L  + R+  A   + E
Sbjct: 461 VIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGE 520

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T N+++   CK G   RA E+   M   G +P   TY  LISG C+ G 
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580

Query: 314 LSLAMKFKN--------LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +S A +F N        L E  G  PNV+T+  LI G CK G + +A  +  EM A+N  
Sbjct: 581 VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TY   ++     GN E    L++ +L  G   + +TYN LI G CK G+ ++AA +
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEV 699

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++  + + P+  +YS +I   C R + + A +L++SM+  G  P+   +  L+   C 
Sbjct: 700 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 759

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             +  +A E+  +M+ + + P+    + L  G
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 153/298 (51%), Gaps = 11/298 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  ++     +KLF  ++    +   + + +++L + +        A +   +M 
Sbjct: 500 ALISGLCHANRMAEANKLFGEMVEWNVI--PNEVTYNVLIEGHCKEGNTVRAFELLDEMV 557

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-----RRNRIS---PNVYTLNMVMHA 272
           + G +P   +    +S L  + RV  A  F  ++     + N I    PNV T   +++ 
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            CK+G++++A  + + M +   +P+  TY   +    ++G +  A++  +++ + G   N
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLAN 676

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
            +T+N LI GFCK G++ EA  +   M  + +SP+ ++Y+T+I  Y + G+ +    L+E
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            ML  G+  D + YN LI G C  G+  KA  L  D+ +  + PN +TY++LI G C+
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCL 794



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 103/225 (45%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + F+ LI  + +  +  +   +   M    + P + T + ++NG  ++    M   L++E
Sbjct: 146 LGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDE 205

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ++ +G++ D+  Y A++  LC+     +A  ++  ++ +    + +TY+  I G C  + 
Sbjct: 206 IVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQR 265

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A ++   +   G R +   +  L+   C+ E+F+   E++ EM+E    P    +S 
Sbjct: 266 VWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSN 325

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           L  GL   G    A  L  K++  G+ P  F     IN   ++G+
Sbjct: 326 LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 178/353 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++ +  ++L   Y    +  +A     Q    GF P   + N F++ L  ++ V  AL
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHAL 306

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+V+T N+V++  CK G +E A  +   M   G +P +TT+NTLI+  
Sbjct: 307 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAAL 366

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A+     +   G+ P+V TFN LI   CK G  H A R+F EMK +  +P+ 
Sbjct: 367 CTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDE 426

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+    +G       L ++M   G     +TYN +I GLCK+ + ++A  +   
Sbjct: 427 VTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQ 486

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  K  + AF L   MI  G +PN   +  +++ +C+  D
Sbjct: 487 MDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGD 546

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AA++L  M       D +    L +GL   G+ ++A+K+ R M I+G+ P
Sbjct: 547 IKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 3/383 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           + + G+  +D      K+ D ++      D     ++++        +   A     QM 
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGH--DPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 348

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP I + N  +++L    R++ AL   +++    +SP+VYT N++++A CK+G   
Sbjct: 349 DRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPH 408

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+ M++ G  P   TYNTLI   C+ G L  A+     ME  G   + IT+NT+I
Sbjct: 409 LALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTII 468

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKK ++ EA  +F +M    +S N +T+NTLI+G  +    +    L  +M+  G++
Sbjct: 469 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQ 528

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN+++   CK+G  KKAA +++ +  N    +  TY  LI G C    ++ A ++
Sbjct: 529 PNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKV 588

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M   G RP    +  ++ +  +  +   A  +  EM E    PD++    ++ GL  
Sbjct: 589 LRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 521 CGKD-ELAMKLFRKMEIRGLLPK 542
            G   + A     +M  +G +P+
Sbjct: 649 GGGPIKEAFDFMLEMVDKGFIPE 671



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 25/407 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T   ++IV++ L KN + + ++ IL  ++D                  R C 
Sbjct: 315 EGHDPDVFT---YNIVVNCLCKNGQLEEAKGILNQMVD------------------RGCL 353

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L        +   A D   Q+   G  P + + N  +++L       +AL  
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N ++   C LG + +A+++ K+MES G   S  TYNT+I G C 
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  N ITFNTLI G CK  K+ +A  + ++M +  + PN +T
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNIT 533

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + E M  NG +VD++TY  LI GLCK G+T+ A  +++ + 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ ++     R N   A  L++ M   G  P+   ++++    C+     
Sbjct: 594 IKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPI 653

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             A + +LEM++K   P+      L  GL + G D+      R +EI
Sbjct: 654 KEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY---FIRAIEI 697



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 6/343 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRD--YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
             +Y  ++ F +A D         +G        N  L+ L++  ++ +    Y EM   
Sbjct: 116 LDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGAR 175

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V T N +M A C+   +  AV + + M S G  P  TT+ TL+ G   +G +  A
Sbjct: 176 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAA 235

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M + G     +T N LI G+CK G++ +A     +  A    P+ +TYNT +NG
Sbjct: 236 LRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNG 295

Query: 378 YGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Q  N  +G +L   + M++ G   D+ TYN ++  LCK G+ ++A  ++  +     +
Sbjct: 296 LCQ--NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +T++ LI   C     E A  L + +   G  P+ + F +L++  C+  D   A  +
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             EM      PD +  + L   L   GK   A+ L + ME  G
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 121/257 (47%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M + G  P V T+NTL+   C    +  A+     M   G+ P+  TF TL+ GF 
Sbjct: 168 VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 227

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ + M     S   VT N LINGY ++G  E      ++ + +G + D +
Sbjct: 228 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 287

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN  + GLC+      A  ++  + +    P+  TY+ ++   C     E A  +   M
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   F  L++  C     + A ++  ++  K ++PD    + L + L   G  
Sbjct: 348 VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDP 407

Query: 525 ELAMKLFRKMEIRGLLP 541
            LA++LF +M+  G  P
Sbjct: 408 HLALRLFEEMKNSGCTP 424



 Score = 46.6 bits (109), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 5/147 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG- 277
           MR  G  P  ++ N  L SL     +  AL  ++EM      P+  T  +V    C+ G 
Sbjct: 592 MRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITF 336
            I+ A +    M   GFIP  +++  L  G  N G+    ++  + +MEK  ++ + +  
Sbjct: 652 PIKEAFDFMLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDLRESDV-- 709

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATN 363
            + I G+ K  K ++A   F      N
Sbjct: 710 -SAIRGYLKIRKFYDALATFGRFLEIN 735


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 195/376 (51%), Gaps = 37/376 (9%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y +     +A  +F Q+     LP +   NK L SL+  +     +   K+M  + I PN
Sbjct: 44  YNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPN 103

Query: 263 VYTLNMVMHAFC------------------KLGI-------------------IERAVEV 285
           VYTL ++++  C                  KLG+                   I  AV++
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +  MGF PS+ TY T+I G C  G  + A++    ME+ G +P+V+ +NT+I   CK
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             + +EA   FSEM    + PNVVTY+++++G+  +G      SL+++M+   +  + +T
Sbjct: 224 DRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVT 283

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +  L+ GLCKEG   +A  + + + +N + P+A TYSAL+ G C++   + A +L+  M+
Sbjct: 284 FTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMV 343

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  P+  ++ +L++  C++   + A  +L EM ++ + PD++  S L  G    G+ +
Sbjct: 344 GKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQ 403

Query: 526 LAMKLFRKMEIRGLLP 541
           +A KLF++M   GLLP
Sbjct: 404 VAQKLFKEMCSYGLLP 419



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 190/382 (49%), Gaps = 4/382 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQM 219
           ++L G+          KLFD I    +M  +  L+ +  + K         NA     +M
Sbjct: 146 TLLNGLCSKAKIIDAVKLFDEI---GKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            + G  P + + N  + SL    R + A+ F+ EM    I PNV T + ++H FC LG +
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A  +FK M     +P+  T+  L+ G C +G++  A +   +M +NG++P+  T++ L
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G+C + ++ EA ++F  M     +P+V  YN LING+ +        +L  EM    +
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D +TY+ L+ G C+ G+ + A  L K++    L+P++ TYS L+ G C   + + AF+
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L K+M  S   P+  I+ +L+   C     + A E+   +  K + P  +  + + SGL 
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G    A ++FRKM + G LP
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLP 524



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 165/349 (47%), Gaps = 2/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L      + K  +A   F ++   GF P + +    +  L        AL   K+
Sbjct: 142 VTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKK 201

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+V   N V+ + CK      A+  F  M   G  P+V TY++++ G CN G 
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L+ A   FK ++ +N + PN +TF  L+ G CK+G + EA R+F  M    V P+  TY+
Sbjct: 262 LNEATSLFKQMIGRN-VMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYS 320

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++GY      +    L++ M+  G    +  YN LI G CK  +  +A  L+ ++   
Sbjct: 321 ALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L P+  TYS L+ G C     + A +L+K M   G  P+   + +L+   C++   D A
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEA 440

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +L  M E  + P   I + L  G+ + GK E A +LF  + ++G+ P
Sbjct: 441 FRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQP 489



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 159/339 (46%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           +++R     A     +M   G  P   +    L+ L    ++  A+  + E+ +   +P+
Sbjct: 116 HSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPS 175

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           + T   ++   CK+G    A+++ K ME  G  P V  YNT+I   C     + AM F +
Sbjct: 176 LITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFS 235

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   GI PNV+T+++++ GFC  G+L+EA  +F +M   NV PN VT+  L++G  + G
Sbjct: 236 EMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEG 295

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                  ++E M  NG++ D  TY+AL+ G C + +  +A  L   +      P+   Y+
Sbjct: 296 MILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYN 355

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI G C  +    A  L   M      P+   +  LM  FCQ      A ++  EM   
Sbjct: 356 ILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY 415

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + PDSI  S L  GL   G  + A +L + M+   + P
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEP 454



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 156/315 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   + +  +   AT  F QM     +P   +    +  L     +  A   ++ 
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N + P+ YT + +M  +C    ++ A ++F  M   GF PSV  YN LI+GHC    
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A    + M    + P+ +T++TL+ GFC+ G+   A ++F EM +  + P+ +TY+ 
Sbjct: 367 LNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSI 426

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  + G+ +    L + M  + I+  I  YN LI G+C  GK + A  L  +L    
Sbjct: 427 LLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKG 486

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ +I+G      S  A ++++ M+ +GC PN   + + +  F +N D   A 
Sbjct: 487 IQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAV 546

Query: 494 EVLLEMLEKCMAPDS 508
            ++ EM+ +  + DS
Sbjct: 547 RLIEEMVGRGFSADS 561



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/288 (24%), Positives = 124/288 (43%), Gaps = 2/288 (0%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ISP+  T       +  L  +  AV  F  +  +  +P V  +N L+     K   S  +
Sbjct: 30  ISPSSITNGGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVI 89

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGK--LHEANRIFSEMKATNVSPNVVTYNTLIN 376
                M+ + I+PNV T   LI   C   +  +H A     +M    + P  VT+ TL+N
Sbjct: 90  SLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLN 149

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G            L++E+ + G    ++TY  +I GLCK G T  A  L+K +++    P
Sbjct: 150 GLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKP 209

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   Y+ +I   C  + +  A   +  M+  G  PN   +  ++  FC     + A  + 
Sbjct: 210 DVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLF 269

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +M+ + + P+++  + L  GL   G    A ++F  M   G+ P  +
Sbjct: 270 KQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAY 317



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 6/189 (3%)

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK--VDILTYNALILGLC 414
           S    TN+SP+ +T     + Y  + +     + + ++L  GI+    ++ +N L+  L 
Sbjct: 23  STASTTNISPSSITNGGFCSNYNNLHSVADAVASFNQLL--GIRPLPPVVVFNKLLGSLV 80

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC--VRKNSERAFQLYKSMIRSGCRPN 472
           K+        L K +D +++ PN  T + LI   C   R +   AF     M + G +P 
Sbjct: 81  KKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPT 140

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              F  L++  C       A ++  E+ +   AP  I  + +  GL   G    A++L +
Sbjct: 141 HVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLK 200

Query: 533 KMEIRGLLP 541
           KME +G  P
Sbjct: 201 KMEEKGCKP 209


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 200/422 (47%), Gaps = 6/422 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           +LE F  V      +   + +S ++H+LT  + +  +  ++R ++        S++  S+
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 183 LYSYRMCDSS---PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
                  +SS   P VF +L   ++       A   + +M     LP +++CN  L  L+
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
              R D     Y +M     SPNV T   ++   C+ G   +A  +F  M      P+V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y  LI G C +  +S A      M  +G+ PN+ T+NT++ G+CK   + +A  ++ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               + PNVVT+  LI+G  +            +M   G+  +I  YN LI G CK G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L  +++K+ ++P+  TYS LI G C     E A  L + M + G  PN   +  L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  +C+  + ++A EV  +M EK + P+ I  S L  G    GK E AM L+ +M I+GL
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 540 LP 541
           LP
Sbjct: 470 LP 471



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 158/304 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L +      +   A   F  MR+ G LP + + N  +        V  AL  Y+E
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + PNV T  +++   CK   +  A +   +M S G +P++  YN LI G+C  G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A+   + +EK+ I P+V T++ LI G C   ++ EA+ +  EMK     PN VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E    +  +M   GI+ +I+T++ LI G CK GK + A  L  ++    
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+   Y+ALI G     N++ AF+L+K M  +G  PN      L+   C++     A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 494 EVLL 497
           ++ L
Sbjct: 529 KLFL 532



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 180/375 (48%), Gaps = 2/375 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++   +L G++    FD   K++  ++   R    + + +  L      +  F  A   F
Sbjct: 159 QACNMVLDGLVKKGRFDTMWKVYGDMVA--RGASPNVVTYGTLIDGCCRQGDFLKAFRLF 216

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M +    P +      +  L    R+  A   ++ MR + + PN+YT N +M  +CK+
Sbjct: 217 DEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKI 276

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             +++A+E+++ M   G +P+V T+  LI G C    +  A KF   M   G+ PN+  +
Sbjct: 277 AHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVY 336

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G+CK G L EA  + SE++   + P+V TY+ LI G   V   E    L +EM +
Sbjct: 337 NCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKK 396

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   + +TYN LI G CKEG  +KA  +   + +  + PN  T+S LI G C     E 
Sbjct: 397 KGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA 456

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  LY  M+  G  P+   +  L+    ++ +   A  +  EM E  + P+   LS L  
Sbjct: 457 AMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLID 516

Query: 517 GLHHCGKDELAMKLF 531
           GL   G+   A+KLF
Sbjct: 517 GLCKDGRISDAIKLF 531



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 5/260 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +ES  F P+V  +  LI      GL+  A+     M+   + P +   N ++ G  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           KKG+     +++ +M A   SPNVVTY TLI+G  + G+      L++EM+   I   ++
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            Y  LI GLC E +  +A  + + +  + ++PN  TY+ ++ G C   + ++A +LY+ M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  G  PN   F +L+   C+ ++   A + L++M    + P+  + + L  G    G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A+ L  ++E   +LP  F
Sbjct: 350 SEALSLHSEIEKHEILPDVF 369



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 79/170 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L K      +   A     +M+  GFLP   + N  +        ++ A+    +M 
Sbjct: 371 YSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT 430

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I PN+ T + ++  +CK G +E A+ ++  M   G +P V  Y  LI GH   G   
Sbjct: 431 EKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTK 490

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            A +    M++ G+ PNV T + LI G CK G++ +A ++F     T+ +
Sbjct: 491 EAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTT 540



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/273 (21%), Positives = 117/273 (42%), Gaps = 18/273 (6%)

Query: 232 NKFLSSLLDSERVDIALGFYK-EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N+ L   L S      L F++  +R+N  S + ++L   + A      +    ++   + 
Sbjct: 599 NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVI 658

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + GF P +    +LIS +   G ++ A   F  +  KN     +I++ ++I  +    + 
Sbjct: 659 NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN-----LISWTSVISAYVDNQRP 713

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
           ++A ++F +M+  +V P++VT    ++    +G  +MG  ++  +   G+  D+   N+L
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773

Query: 410 I--LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           I     C E  T +   LV        +PN  T+  ++         E   Q ++SM   
Sbjct: 774 INMYSKCGEIGTARRFSLV--------LPNDVTFMGVLMACSHAGLVEEGKQHFRSMKED 825

Query: 468 -GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              RP    F  ++   C+      A E +L+M
Sbjct: 826 YSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 858


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 179/337 (53%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H      A  TF +M      P     N+ L+S+  ++     L   ++M    I P+VY
Sbjct: 22  HFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVY 81

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           TL +V+++ C L  ++ A      +  +G  P  TT+ TLI G C +G +  A+   + M
Sbjct: 82  TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G QPNV+T+ TLI G CK  ++ EA  IFSEM    +SPN+VTYN+LI+G  ++   
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +   +L  EM+ + I  D+ T N ++  LCKEG   +A  +V  +    + PN  TY+AL
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G C+R   + A +++ +M+   C  N   +  L++ +C+ +  D+A  +  EM  + +
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P+++  + L  GL H G+ + A+ LF +M  RG +P
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIP 358



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 177/373 (47%), Gaps = 13/373 (3%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L +      K   A   F +M   GF P + +    ++ L    +V  A   + EM 
Sbjct: 118 FTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMI 177

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ISPN+ T N ++H  CKL   +    +   M     +P V T NT++   C +G+++
Sbjct: 178 TKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVA 237

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    ++M   G++PNV+T+N L+ G C + ++  A ++F  M   +   NV++YNTLI
Sbjct: 238 EAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLI 297

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++ + +    L+EEM R  +  + +TYN LI GLC  G+ + A  L  ++     +
Sbjct: 298 NGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQI 357

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY  L    C  ++ ++A  L K++  S   P+  I+  ++   C+  + + A ++
Sbjct: 358 PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 417

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLPKGF-- 544
              +  K + P+    + +  GL   G    A KLF +M   G         L+ +GF  
Sbjct: 418 FSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLR 477

Query: 545 --DKLRTINCAPE 555
             + LRTI    E
Sbjct: 478 NNEALRTIELLEE 490



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 177/371 (47%), Gaps = 15/371 (4%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++   A + F +M   G  P I + N  +  L              EM  ++I P+V+TL
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N V+ A CK G++  A +V   M   G  P+V TYN L+ GHC +  + +A+K  + M  
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
                NVI++NTLI G+CK   + +A  +F EM    ++PN VTYNTLI+G   VG  + 
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             SL+ EM+  G   D++TY  L   LCK     KA  L+K ++ ++  P+   Y+ ++ 
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 403

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     E A  L+ ++   G +PN   + +++   C+      A+++  EM +   +P
Sbjct: 404 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 463

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRG--------------LLPKGFDK-LRTIN 551
           +    + +  G     +    ++L  +M  RG              L   G D+ ++ I 
Sbjct: 464 NDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQIL 523

Query: 552 CAPENGEKESG 562
           C P +  + SG
Sbjct: 524 CKPSSSSRPSG 534



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 181/387 (46%), Gaps = 28/387 (7%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           +LT   K K   ++L      DSF +P  ++                 ++L  ++ H ++
Sbjct: 587 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY---------------TLNILINSFCHLRR 631

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A     ++   GF P + +    ++ L              +M    ISP+++T N 
Sbjct: 632 LGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISPDIFTYNS 678

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++HA C L   +    +   M +   +P+V  ++T++   C +G++++A    ++M K G
Sbjct: 679 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           ++P+V+T+  L+ G C + ++ EA ++F  M      PNV +YN LINGY Q+   +   
Sbjct: 739 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 798

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L E+M   G+  D +TYN LI GLC  G+ + A  L  ++  +  +P+  TY  L+   
Sbjct: 799 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 858

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C   +   A  L K++  S    +  ++ + +   C+  + + A ++   +  K + PD 
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDV 918

Query: 509 IILSELYSGLHHCGKDELAMKLFRKME 535
              + +  GL   G  + A KLFRKM+
Sbjct: 919 RTYNIMIHGLCKRGLLDEANKLFRKMD 945



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 167/385 (43%), Gaps = 35/385 (9%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K          QM  +G  P + +    ++SL    RVD A    
Sbjct: 44  STVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSAL 103

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  
Sbjct: 104 AKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKD 163

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFG----------------------------- 342
             ++ A    + M   GI PN++T+N+LI G                             
Sbjct: 164 RQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223

Query: 343 ------FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                  CK+G + EA+ +   M    V PNVVTYN L++G+      ++   +++ M+ 
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                ++++YN LI G CK     KA YL +++ +  L PN  TY+ LI G C     + 
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L+  M+  G  P+   +  L    C+N   D+A  +L  +      PD  I + +  
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 403

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G+   G+ E A  LF  +  +GL P
Sbjct: 404 GMCRAGELEDARDLFSNLSSKGLQP 428



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 170/370 (45%), Gaps = 28/370 (7%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H     +A  +F +M      P      K L+S+   +     L    +M    I P+VY
Sbjct: 558 HFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVY 617

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC---NKGLL------- 314
           TLN+++++FC L  +  A  V   +  +GF P V TY TL++G C    KG+        
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYN 677

Query: 315 SLAMKFKNLME------------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           SL     NL E             + I PNV+ F+T++   CK+G +  A+ +   M   
Sbjct: 678 SLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKR 737

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+VVTY  L++G+      +    +++ M+  G   ++ +YN LI G C+  +  KA
Sbjct: 738 GVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKA 797

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L++ +    L+ +  TY+ LI G C     + A  L+  M+ SG  P+   + +L+  
Sbjct: 798 MGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDY 857

Query: 483 FCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C+N     A  VLL+ +E   +  D ++ +    G+   G+ E A  LF  +  +GL P
Sbjct: 858 LCKNHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916

Query: 542 KGFDKLRTIN 551
                +RT N
Sbjct: 917 ----DVRTYN 922



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 119/247 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF  +            A D    M   G  P + +    +        +D A+  +  
Sbjct: 709 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 768

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PNV + N++++ +C++  +++A+ + + M   G I    TYNTLI G C+ G 
Sbjct: 769 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 828

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   + M  +G  P+++T+  L+   CK   L EA  +   ++ +N+  +++ YN 
Sbjct: 829 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 888

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+G  + G  E    L+  +   G++ D+ TYN +I GLCK G   +A  L + +D+N 
Sbjct: 889 AIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948

Query: 434 LVPNAST 440
           +  N+++
Sbjct: 949 IWSNSTS 955



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 53/216 (24%), Positives = 90/216 (41%), Gaps = 35/216 (16%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  +   + +  L   +  R +   A   F  M   G +P + S N  ++     +R+D 
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY----- 301
           A+G  ++M    +  +  T N ++H  C +G ++ A+ +F  M + G IP + TY     
Sbjct: 797 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 856

Query: 302 ------------------------------NTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
                                         N  I G C  G L  A    + +   G+QP
Sbjct: 857 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +V T+N +I G CK+G L EAN++F +M   ++  N
Sbjct: 917 DVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 103/243 (42%)

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           +++NT  S   +   L  A+   N M      P+ + FN L+    K         +  +
Sbjct: 11  SSHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQ 70

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M +  + P+V T   +IN    +   +   S   ++L+ G + D  T+  LI GLC EGK
Sbjct: 71  MDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGK 130

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A +L   +      PN  TY  LI G C  +    AF ++  MI  G  PN   +  
Sbjct: 131 IGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNS 190

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+   C+  ++     ++ EM++  + PD   L+ +   L   G    A  +   M  RG
Sbjct: 191 LIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRG 250

Query: 539 LLP 541
           + P
Sbjct: 251 VEP 253


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 200/419 (47%), Gaps = 17/419 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLF--------DSILYSYR 187
           L  ++ V++ L K+     +E+I++ + +S    D+F   S +         DS L  + 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 188 M-----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                 C+ + + +  L        +   A D   +M  +G LP   +C   + +L D  
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             + A   + +M+     PNVYT   ++   C  GI++ A+ +F  M   G  P+  TYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+       +  A    NLM +NG  PN++T+N +I G+C  G   +A  + + M   
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             S N+VTYNT+I GY   GN+     + + M   G K D  +Y  LI G CK  K + A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++  + L PN  TY+ALI G C  +  + A  L + M RSGCRPN   + +L+  
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  +F  A E+   M+E+ + P+ +  + +  GL   G   LA+++F KM  +G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 169/353 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L          + A   F +M   G  P   + N  ++ L+++ R+  A 
Sbjct: 351 CEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M RN  SPN+ T N ++  +C LG  ++A+ V  NM   G   ++ TYNT+I G+
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G  + A++  +LM   G +P+  ++  LI GFCK  K+  A  +F+EM    + PN 
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+GY +    +   SL E M R+G + ++ TYN LI GL K+     A  L K 
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + PN  TY+A+I G C   ++  A +++  MI  GC PN   +  L+    Q   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A  +  E+    + PD I   ++       GK E A     +M   G  P
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 18/339 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ +++IL +NR+ K +  +L                   L     C  + + ++ + K
Sbjct: 392 TYNALINILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIK 433

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      + A      M   G    + + N  +    DS     AL     MR     P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + ++   ++  FCK+  +E A  +F  M   G  P+  TY  LI G+C    L  A    
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+++G +PNV T+N LI G  K+     A  +   M    + PNVVTY  +I+G  + 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++ +   ++ +M+  G   ++LTY++LI  L +EGK ++A  L  +L+++ L+P+  TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             +I    +    E AF     MI++GC+P    + +L+
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D + +M   G  P +   N  +++L     V  A    K++  + +SP+ +T   ++   
Sbjct: 201 DRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGH 260

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+   ++ A++VF  M   G  P+  TY+TLI+G C+ G ++ A      M  +GI P  
Sbjct: 261 CRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTA 320

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T    I   C  G   +A R+F +MK     PNV TY  LI+G    G  ++   L+  
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHR 380

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R+G+  + +TYNALI  L +  + K A  ++  + +N   PN  TY+ +I G C+  +
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++A  +  +M++ G   N   +  ++  +C + +   A  +L  M +    PD    +E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G     K E A  LF +M   GL P
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCP 528



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 179/440 (40%), Gaps = 61/440 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I++G  DS +     ++ D  L     C      +  L   +    K  +A   F +M 
Sbjct: 465 TIIKGYCDSGNTTSALRILD--LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   +    +      E++D A    + M+R+   PNV T N+++H   K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+ K M   G  P+V TY  +I G C  G  SLA++  N M + G  PN++T+++LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               ++GK+ EA  +F+E++   + P+ +TY  +I  Y   G  E   +    M++ G +
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 401 VDILTYNALILGLCKE---GKTKKAA-----------YLVKDLD---------------- 430
             + TY  LI GL  E      + AA           Y   D D                
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762

Query: 431 ----KNSLVPNAST-------------------------YSALITGQCVRKNSERAFQLY 461
               +N+LV N ST                         Y++L+      +N + A  ++
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M   GC  + + ++ L+   CQ      A      ML +   PD ++ + L  GL   
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  +L M+    ME R  +P
Sbjct: 883 GYKDLCMEFLHIMETRRYMP 902



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 7/312 (2%)

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           +I+SC+         E +   + F   + ++ +   ++  + ++    +LG+    ++ +
Sbjct: 151 LIKSCHS-------KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY 203

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S G  P++  YN +I+  C  G ++ A      + ++ + P+  T+ ++I G C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             L  A ++F++M      PN VTY+TLING    G       L  EM+ +GI     T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
              I+ LC  G  + A  L  D+      PN  TY+ALI+G CV    + A  L+  M R
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR 383

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L++   +N     A  VL  M     +P+ +  +E+  G    G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 527 AMKLFRKMEIRG 538
           AM +   M  RG
Sbjct: 444 AMLVMNNMLQRG 455



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 112/253 (44%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI    +K  ++  M F +++ ++G++  +  ++ L+    + G        +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN++ YN +IN   + GN     ++ +++  + +  D  TY ++ILG C++     A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + K    PN  TYS LI G C       AF L + MI  G  P  H     +   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C    ++ A  + ++M  K   P+    + L SGL   G  ++A+ LF +M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 544 FDKLRTINCAPEN 556
                 IN   EN
Sbjct: 391 VTYNALINILVEN 403



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/368 (19%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           ++T+++++H LTK   F  +E + + +++   F                   + + +  +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF------------------PNVVTYTAM 606

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                       A + F +M + G LP + + +  + +L    +V+ A   + E+ R+ +
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+  T   ++ A+   G +E A      M   G  P++ TY  LI G  N+ LL+    
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA---- 722

Query: 320 FKNLMEKNGIQPN----------------------------VITFNTLIFGFCKKGKLHE 351
            + L     + PN                            V   N L+      G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN +   M +  + P+   YN+L+    +V N ++   +++ M   G +V +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC+  + K+A    +++   +  P+    + LI G       +   +    M      P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902

Query: 472 NKHIFEML 479
           + HI+ +L
Sbjct: 903 SFHIYTIL 910



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 57/139 (41%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++  A +    M   G  P  E+ N  L SLL    VD+A+G +K M       ++    
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ A C+L   + A   F+NM    + P       LI G    G   L M+F ++ME  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 328 GIQPNVITFNTLIFGFCKK 346
              P+   +  L     KK
Sbjct: 899 RYMPSFHIYTILAREASKK 917


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/355 (32%), Positives = 182/355 (51%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   +  L    +   K   A   + +M   G +P   + N  ++ L    R   
Sbjct: 374 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 433

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  +  M  +    N  T N ++   C  G IE+A+ +F+ M  MG +P+V TYNTLI+
Sbjct: 434 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 493

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+  KG ++ A +  +LM++NG +P+  T+N L+ GF K GKL  A+  F EM    ++P
Sbjct: 494 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 553

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V+Y TLI+G+ + G  ++  SL E M   G   ++ +YNA+I GL KE +  +A  + 
Sbjct: 554 NPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 613

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L+PN  TY+ LI G C    ++ AF+++  M +  C PN + +  L+   CQ 
Sbjct: 614 DKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 673

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              D A  +L EM  K +APD +  + L  G    G+ + A  L R+M   G  P
Sbjct: 674 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKP 728



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 200/427 (46%), Gaps = 24/427 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDL 174
           +PS LT  T   +++IL+K  K + +E IL  I   D                   + DL
Sbjct: 237 QPSLLTFNT---LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
              +FD ++     CD + + +  L     +  +   A D   +M + G  P + +    
Sbjct: 294 AFGVFDRMVK--EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +++L   E  + A+     M++    PNV T   ++    +LG +E A+ ++  M   G 
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN LI+  C  G  S A+K  + ME +G   N  T+N +I G C  G + +A  
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F +M      P VVTYNTLINGY   GN    A L + M  NG + D  TYN L+ G  
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K GK + A++  +++ +  L PN  +Y+ LI G       + A  L + M   GC PN  
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVE 591

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  +++   +   F  A ++  +M E+ + P+ I  + L  GL   G+ + A K+F  M
Sbjct: 592 SYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 651

Query: 535 EIRGLLP 541
           E R  LP
Sbjct: 652 EKRKCLP 658



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 172/350 (49%), Gaps = 24/350 (6%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M   G LP + + N  ++  L    V+ A      M+ N   P+ +T N ++  F K
Sbjct: 473 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +E A   F+ M   G  P+  +Y TLI GH   G + +A+     ME+ G  PNV +
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N +I G  K+ +  EA +I  +M    + PNV+TY TLI+G  + G ++    ++ +M 
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           +     ++ TY++LI GLC+EGK  +A  L+K++++  L P+  T+++LI G  V    +
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMS---------------------TFCQNE---DFDR 491
            AF L + M+  GC+PN   + +L+                      +F  +E   +F+ 
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEI 772

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +L  M E    P     S L SGL   G+   A +L + M+ RG  P
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 822



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 212/511 (41%), Gaps = 70/511 (13%)

Query: 68  HRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLE 125
           H  +P  +      V+   + L    WK  + L       +  HV  ++ V KD    ++
Sbjct: 76  HFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQ 135

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           FF W+         +     +L+ L ++R F  ++ I                       
Sbjct: 136 FFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI----------------------- 172

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
            R+         L+ K   + ++ R   D   ++   GF   + SCN  L  L   E V+
Sbjct: 173 -RI---------LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 222

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   YK+M  + I P++ T N +++   K G +  A  +   +      P V TY +LI
Sbjct: 223 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 282

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE------- 358
            GHC    L LA    + M K G  PN +T++TLI G C +G++ EA  +  E       
Sbjct: 283 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 342

Query: 359 ----------------------------MKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
                                       MK     PNV TY  LI+G  ++G  E+   L
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 402

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y +ML+ G+  + +TYNALI  LC  G+   A  +   ++ +  + N  TY+ +I G C+
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             + E+A  L++ M++ G  P    +  L++ +    + + AA +L  M E    PD   
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +EL SG    GK E A   F++M   GL P
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNP 553



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 202/452 (44%), Gaps = 47/452 (10%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           L V   +  +L+ F W++ H   + T                 ++   I++G+      +
Sbjct: 425 LCVGGRFSTALKIFHWMEGHGSLANT-----------------QTYNEIIKGLCLGGDIE 467

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF+ +L    +   + + ++ L   Y  +    NA      M++ G  P   + N+
Sbjct: 468 KAMVLFEKMLKMGPL--PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 525

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S      +++ A  +++EM    ++PN  +   ++    K G ++ A+ + + ME MG
Sbjct: 526 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V +YN +I+G   +   S A K  + M + G+ PNVIT+ TLI G C+ G+   A 
Sbjct: 586 CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAF 645

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           +IF +M+     PN+ TY++LI G  Q G ++    L +EM R G+  D +T+ +LI G 
Sbjct: 646 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 705

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG---QCVRKNSERAFQ----------- 459
              G+   A  L++ +      PN  TYS L+ G   +C+    + A Q           
Sbjct: 706 VVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHE 765

Query: 460 ----------LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                     L   M   GC P    +  L+S  C+   F  A +++ +M E+   PD  
Sbjct: 766 KDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 825

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
           I   L   + HC   E+  A+K+F  +E +G 
Sbjct: 826 IYYSLL--IAHCKNLEVDHALKIFHSIEAKGF 855



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 185/440 (42%), Gaps = 61/440 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G L   + +  ++L D  L     C+     ++ L   ++   K  +A+  F +M 
Sbjct: 490 TLINGYLTKGNVNNAARLLD--LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   S    +       +VDIAL   + M     +PNV + N V++   K     
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++   M   G +P+V TY TLI G C  G    A K  + MEK    PN+ T+++LI
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVV------------------------------- 369
           +G C++GK  EA  +  EM+   ++P+ V                               
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727

Query: 370 ----TYNTLING------------------------YGQVGNSEMGASLYEEMLRNGIKV 401
               TY+ L+ G                        + +  N E+ ++L   M   G + 
Sbjct: 728 PNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEP 787

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            + TY+ L+ GLC++G+  +A  LVKD+ +    P+   Y +L+   C     + A +++
Sbjct: 788 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIF 847

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            S+   G + +  I+  L+   C+    + A  +   MLEK    D I+ + L  GL   
Sbjct: 848 HSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKE 907

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ +L MKL   ME +   P
Sbjct: 908 GELDLCMKLLHIMESKNFTP 927



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/351 (20%), Positives = 146/351 (41%), Gaps = 26/351 (7%)

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
           N   +S  +++ G+   + F    K+ D +     +   + + +  L        + + A
Sbjct: 587 NPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLL--PNVITYTTLIDGLCRNGRTQFA 644

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              F  M     LP + + +  +  L    + D A    KEM R  ++P+  T   ++  
Sbjct: 645 FKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDG 704

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL---SLAMKFKNL------ 323
           F  LG I+ A  + + M  +G  P+  TY+ L+ G   + LL    +A++ + +      
Sbjct: 705 FVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPH 764

Query: 324 ---------------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                          M + G +P + T++TL+ G C+KG+ +EA ++  +MK     P+ 
Sbjct: 765 EKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDR 824

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             Y +L+  + +    +    ++  +   G ++ +  Y ALI  LCK G+ ++A  L  +
Sbjct: 825 EIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDN 884

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + +     +   ++ L+ G       +   +L   M      PN   + +L
Sbjct: 885 MLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 75/348 (21%), Positives = 135/348 (38%), Gaps = 45/348 (12%)

Query: 140 LETHSIVLHILTKNRKFKSSESI-------------------LRGILDSDSFDLPSKLFD 180
           +E+++ V++ L+K  +F  +E I                   + G+  +       K+F 
Sbjct: 590 VESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFH 649

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            +    R C  +   +  L        K   A     +M   G  P   +    +   + 
Sbjct: 650 DM--EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAF---C-----KLGIIERAV--------- 283
             R+D A    + M      PN  T ++++      C     K+ +   AV         
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKD 767

Query: 284 ---EVFKN----MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
              E+  N    M  +G  P++ TY+TL+SG C KG    A +    M++ G  P+   +
Sbjct: 768 VNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIY 827

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            +L+   CK  ++  A +IF  ++A     ++  Y  LI    + G  E   +L++ ML 
Sbjct: 828 YSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLE 887

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                D + +  L+ GL KEG+      L+  ++  +  PN  TY  L
Sbjct: 888 KEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 935



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 77/169 (45%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P + T + ++   C+ G    A ++ K+M+  GF P    Y +L+  HC    +  A+K 
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + +E  G Q ++  +  LI   CK G++ EA  +F  M     + + + +  L++G  +
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            G  ++   L   M       +I TY  L   L + GK+ ++  L   L
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 86/186 (46%), Gaps = 2/186 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
           F  +     F   ++   +M + G  P +++ +  +S L    R   A    K+M+    
Sbjct: 761 FSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 820

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+      ++ A CK   ++ A+++F ++E+ GF   ++ Y  LI   C  G +  A  
Sbjct: 821 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 880

Query: 320 -FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            F N++EK     + I +  L+ G  K+G+L    ++   M++ N +PN+ TY  L    
Sbjct: 881 LFDNMLEKEW-NADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939

Query: 379 GQVGNS 384
            ++G S
Sbjct: 940 SRIGKS 945



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 70/173 (40%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L      + +F  A      M++ GF P  E     L +   +  VD AL
Sbjct: 785 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 844

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  +       ++     ++ A CK G +E A  +F NM    +      +  L+ G 
Sbjct: 845 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 904

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             +G L L MK  ++ME     PN+ T+  L     + GK  E+  +  ++K 
Sbjct: 905 LKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 957


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 184/346 (53%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F ++ K      +   + D   ++R++GF P +      +        ++ A   + EM 
Sbjct: 166 FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +  N +T  +++H   K GI ++  E+++ M+  G  P++ TYN +++  C  G   
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTK 285

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M + G+  N++T+NTLI G C++ K +EAN++  +MK+  ++PN++TYNTLI
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLI 345

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+  VG      SL  ++   G+   ++TYN L+ G C++G T  AA +VK++++  + 
Sbjct: 346 DGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIK 405

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI       N E A QL  SM   G  P+ H + +L+  FC     + A+ +
Sbjct: 406 PSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              M+EK + P+ +I + +  G    G    A++LFR ME + L P
Sbjct: 466 FKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/395 (30%), Positives = 196/395 (49%), Gaps = 13/395 (3%)

Query: 159 SESILRGILDSDSFDLP----------SKLFDSILYSYRMCDSSP--LVFDLLFKTYAHR 206
           +ES ++ +LD  SF +            K FD +L   R    SP  +++  L      +
Sbjct: 153 NESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD-LLVELREFGFSPNVVIYTTLIDGCCKK 211

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            +   A D F +M  +G +    +    +  L  +         Y++M+ + + PN+YT 
Sbjct: 212 GEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTY 271

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N VM+  CK G  + A +VF  M   G   ++ TYNTLI G C +   + A K  + M+ 
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
             I PN+IT+NTLI GFC  GKL +A  +  ++K+  +SP++VTYN L++G+ + G++  
Sbjct: 332 YVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSG 391

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            A + +EM   GIK   +TY  LI    +    + A  L   +++  LVP+  TYS LI 
Sbjct: 392 AAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIH 451

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C++     A +L+KSM+     PN+ I+  ++  +C+     RA  +  +M EK +AP
Sbjct: 452 GFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAP 511

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    S L   L    K + A  L  KM   G+ P
Sbjct: 512 NVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDP 546



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 4/312 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LFK    ++ F    + + +M+++G  P + + N  ++ L    R   A   + EMR   
Sbjct: 243 LFKNGIKKQGF----EMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +S N+ T N ++   C+      A +V   M+S    P++ TYNTLI G C+ G L  A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKAL 358

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ++  G+ P+++T+N L+ GFC+KG    A ++  EM+   + P+ VTY  LI+ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  N E    L   M   G+  D+ TY+ LI G C +G+  +A+ L K + +  L PN 
Sbjct: 419 ARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNE 478

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   +S RA +L++ M      PN   +  L+   C+      A +++ +
Sbjct: 479 VIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538

Query: 499 MLEKCMAPDSII 510
           M++  + P   I
Sbjct: 539 MIDSGIDPSDTI 550



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 148/270 (54%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           ++A   F +MR+ G    I + N  +  L    + + A     +M+   I+PN+ T N +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  FC +G + +A+ + ++++S G  PS+ TYN L+SG C KG  S A K    ME+ GI
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +T+  LI  F +   +  A ++ S M+   + P+V TY+ LI+G+   G     + 
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L++ M+   ++ + + YN +ILG CKEG + +A  L +D+++  L PN ++YS LI   C
Sbjct: 465 LFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLC 524

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             +  + A  L + MI SG  P+  I  ++
Sbjct: 525 KERKLKEAEDLVEKMIDSGIDPSDTICNLI 554



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FD +    R    + + ++ L        K   A     QM+ Y   P + + N  + 
Sbjct: 289 KVFDEM--RERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLID 346

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                 ++  AL   ++++   +SP++ T N+++  FC+ G    A ++ K ME  G  P
Sbjct: 347 GFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           S  TY  LI        +  A++ ++ ME+ G+ P+V T++ LI GFC KG+++EA+R+F
Sbjct: 407 SKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    + PN V YNT+I GY + G+S     L+ +M    +  ++ +Y+ LI  LCKE
Sbjct: 467 KSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKE 526

Query: 417 GKTKKAAYLVKDLDKNSLVPN 437
            K K+A  LV+ +  + + P+
Sbjct: 527 RKLKEAEDLVEKMIDSGIDPS 547



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 174/402 (43%), Gaps = 55/402 (13%)

Query: 142 THSIVLHILTK--NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
             S++L +++     +F +S S+L  + +S++    S+L++ I+                
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVII---------------- 101

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y   +   ++   F +M D GF+P     N  L+ ++ S   +    F+ E  + ++
Sbjct: 102 -NAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKV 159

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             +VY+  +V                                   I G C  G +  +  
Sbjct: 160 VLDVYSFGIV-----------------------------------IKGCCEAGEIEKSFD 184

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               + + G  PNV+ + TLI G CKKG++ +A  +F EM    +  N  TY  LI+G  
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLF 244

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  + G  +YE+M  +G+  ++ TYN ++  LCK+G+TK A  +  ++ +  +  N  
Sbjct: 245 KNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIV 304

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C    +  A ++   M      PN   +  L+  FC      +A  +  ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL 364

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + ++P  +  + L SG    G    A K+ ++ME RG+ P
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKP 406


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 200/422 (47%), Gaps = 6/422 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           +LE F  V      +   + +S ++H+LT  + +  +  ++R ++        S++  S+
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRRSRICCSV 112

Query: 183 LYSYRMCDSS---PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
                  +SS   P VF +L   ++       A   + +M     LP +++CN  L  L+
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLV 169

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
              R D     Y +M     SPNV T   ++   C+ G   +A  +F  M      P+V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y  LI G C +  +S A      M  +G+ PN+ T+NT++ G+CK   + +A  ++ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               + PNVVT+  LI+G  +            +M   G+  +I  YN LI G CK G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L  +++K+ ++P+  TYS LI G C     E A  L + M + G  PN   +  L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  +C+  + ++A EV  +M EK + P+ I  S L  G    GK E AM L+ +M I+GL
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 540 LP 541
           LP
Sbjct: 470 LP 471



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 178/364 (48%), Gaps = 13/364 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L +      +   A   F  MR+ G LP + + N  +        V  AL  Y E
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + PNV T  +++   CK   +  A +   +M S G +P++  YN LI G+C  G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A+   + +EK+ I P+V T++ LI G C   ++ EA+ +  EMK     PN VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E    +  +M   GI+ +I+T++ LI G CK GK + A  L  ++    
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+   Y+ALI G     N++ AF+L+K M  +G  PN      L+   C++     A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 494 EVLL-------------EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           ++ L             E+     +P+ ++ + L  GL   G+   A K F  M   GL 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 541 PKGF 544
           P  F
Sbjct: 589 PDVF 592



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 48/338 (14%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F +L        +  +A      M  +G +P I   N  +     +  +  AL  + E
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + ++ I P+V+T ++++   C +  +E A  + + M+  GF+P+  TYNTLI G+C +G 
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  + M + GI+PN+ITF+TLI G+CK GK+  A  +++EM    + P+VV Y  
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILT---------------------------- 405
           LI+G+ + GN++    L++EM   G+  ++ T                            
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538

Query: 406 --------------------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                               Y ALI GLC +G+  KA+    D+  + L P+  T   +I
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII 598

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            G     +      L   +++ G  PN  ++ +L   +
Sbjct: 599 QGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGY 636



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 5/260 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +ES  F P+V  +  LI      GL+  A+     M+   + P +   N ++ G  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           KKG+     +++ +M A   SPNVVTY TLI+G  + G+      L++EM+   I   ++
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            Y  LI GLC E +  +A  + + +  + ++PN  TY+ ++ G C   + ++A +LY  M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEM 289

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  G  PN   F +L+   C+ ++   A + L++M    + P+  + + L  G    G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A+ L  ++E   +LP  F
Sbjct: 350 SEALSLHSEIEKHEILPDVF 369



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 17/263 (6%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y        A +   QM + G  P I + +  +     + +++ A+G Y E
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+V     ++    K G  + A  + K M+  G  P+V T + LI G C  G 
Sbjct: 464 MVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGR 523

Query: 314 LSLAMKF-------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           +S A+K               N ++++   PN + +  LI G C  G++ +A++ FS+M+
Sbjct: 524 ISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMR 583

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
            + + P+V T   +I G+ +  +      L  ++L+ GI  +   Y  L  G  + G  K
Sbjct: 584 CSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLK 643

Query: 421 KAAYL----VKDLDKNSLVPNAS 439
            A       V+ LD+ +  P  S
Sbjct: 644 SALSFCGEGVQPLDRVNSEPWGS 666



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/294 (18%), Positives = 117/294 (39%), Gaps = 57/294 (19%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L    R+  A  F+ +MR + + P+V+T  +++    +   +   + +  ++  MG
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 294 FIPSVTTYNTLISGH------------CNKGLLSL----AMKFKNLMEKNGIQPNVIT-- 335
            IP+ + Y  L  G+            C +G+  L    +  + +   ++  Q  V+T  
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEK 681

Query: 336 ---------------------FNTLI--------------FGFCKKGKLHEANRIFSEMK 360
                                F+T++               G     + ++A ++F +M+
Sbjct: 682 KECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQ 741

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
             +  P++VT    ++    +G  +MG  ++  +   G+  D+   N+LI    K G+  
Sbjct: 742 MDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIG 801

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            A  L     K     + +T++++I G  +   +E A QL+  M  +  R  K+
Sbjct: 802 TARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKN 851



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 36/265 (13%)

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+++F+ M+     P + T    +S   + G L +       +   G+  ++   N+LI
Sbjct: 732 KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLI 791

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM------ 394
             + K G++  A R+F   +  +V+    T+ ++I G+   G +E    L+ EM      
Sbjct: 792 NMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEMKETNKR 847

Query: 395 ----LRNG------IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSA 443
                RNG      +  + +T+  +++     G  ++     + + ++ SL P  S +  
Sbjct: 848 ARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGC 907

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD-----------RA 492
           ++   C    +    + Y+ +++   RPN  ++  L+       D +            A
Sbjct: 908 MVDLLC---RAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEA 964

Query: 493 AEVLLEMLEKCMAPDSIILSELYSG 517
              LLE LE     D++I+S LY+ 
Sbjct: 965 RRQLLE-LEPSHVGDNVIMSNLYAA 988



 Score = 43.5 bits (101), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 15/132 (11%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNK 311
           E   + + PN  T   V+ A    G++E   + F++M E     P ++ +  ++   C  
Sbjct: 856 EXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRA 915

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK-----------LHEANRIFSEMK 360
           GLL+ A +F   + K  ++PN + + TL+     +G              EA R   E++
Sbjct: 916 GLLTEAYEF---ILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSEARRQLLELE 972

Query: 361 ATNVSPNVVTYN 372
            ++V  NV+  N
Sbjct: 973 PSHVGDNVIMSN 984


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 186/370 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K     ++F  A + F  M      P + S N  +        V  A+ FYKE
Sbjct: 228 VTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKE 287

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   ++P+V + + ++  F + G ++ A    + M+ +G +P    Y  +I G C  G 
Sbjct: 288 MQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A++ ++ M   G  P+V+T+NTL+ G CK+ +L +A ++ +EM+   V+P++ T+ T
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E    L++ +LR  ++ D++TYN+LI G+C++G   KA  L  D+    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++PN  TYS LI   C +   E AF     M++ G  PN   +  ++  +C++ +  +  
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           + L +M +  + PD I  + L  G         A  +F  ME   + P        IN  
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587

Query: 554 PENGEKESGG 563
            E G  +  G
Sbjct: 588 SEQGNMQDAG 597



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 203/431 (47%), Gaps = 27/431 (6%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY-------------SYR 187
           +   +++   T++RK + +    R +LD     +P+   +++L              +YR
Sbjct: 88  QVFDLLIRTYTQSRKPREAFEAFRLLLDH-RVPVPASASNALLAVLSRAGWPHLAQEAYR 146

Query: 188 MCDSS-----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           +  SS         +++  +Y    +F  A     +M      P + + N  + +   + 
Sbjct: 147 LVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAG 206

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            VD A+     M    + P + T N V+   CK    ++A EVF+ M+     P V ++N
Sbjct: 207 DVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFN 266

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI G C  G +  A+KF   M+   + P+V++F+ LI  F ++G++  A     EMK  
Sbjct: 267 ILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL 326

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ V Y  +I G+ + G+      + +EM+  G   D++TYN L+ GLCK+ +   A
Sbjct: 327 GLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDA 386

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+ ++++  + P+  T++ LI G C + N E A QL+ +++R   RP+   +  L+  
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLL 540
            C+  D  +A E+  +M  + + P+ I  S L     HC  G+ E A     +M  +G L
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDS--HCEKGQVEDAFGFLDEMVKKGNL 504

Query: 541 PKGFDKLRTIN 551
           P     +RT N
Sbjct: 505 P----NIRTYN 511



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 195/393 (49%), Gaps = 6/393 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQ 218
           S+L+G+     FD   ++F ++      C  +P V  F++L   +    + + A   + +
Sbjct: 232 SVLKGLCKHRRFDKAKEVFRTM----DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKE 287

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+     P + S +  +        +D A  + +EM+   + P+     MV+  FC+ G 
Sbjct: 288 MQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGS 347

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+ V   M   G +P V TYNTL++G C +  L  A K  N ME+ G+ P++ TF T
Sbjct: 348 MSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTT 407

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+C++G    A ++F  +    + P+VVTYN+LI+G  + G+      L+++M    
Sbjct: 408 LIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHARE 467

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  + +TY+ LI   C++G+ + A   + ++ K   +PN  TY+++I G C   N ++  
Sbjct: 468 ILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQ 527

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q  + M +    P+   F  L+  + + E+   A  V   M ++ + PD++  + + +G 
Sbjct: 528 QFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGF 587

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
              G  + A ++F+ M   G+ P  +  +  IN
Sbjct: 588 SEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLIN 620



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 171/350 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P VFDLL +TY   +K R A + F  + D+       + N  L+ L  +    +A   Y
Sbjct: 86  QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAY 145

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +  +    N YTLN+++H++CK    + A  V   ME     P V T+N LI      
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A+   + M   G++P ++T+N+++ G CK  +  +A  +F  M   +V+P+V ++
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI G+ +VG  +     Y+EM    +  D+++++ LI    + G+   A   ++++  
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+   Y+ +I G C   +   A ++   M+  GC P+   +  L++  C+      
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A ++L EM E+ + PD    + L  G    G  E A++LF  +  + L P
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRP 435



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 153/290 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  +G LP + + N  L+ L    R+  A     EM    ++P++ T   ++H +C+ G
Sbjct: 357 EMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             E A+++F  +      P V TYN+LI G C KG L+ A +  + M    I PN IT++
Sbjct: 417 NFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYS 476

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++ +A     EM      PN+ TYN++I GY + GN + G    ++M ++
Sbjct: 477 ILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++T+N LI G  KE     A  +   ++K  + P+A TY+ +I G   + N + A
Sbjct: 537 NVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            +++K M  SG  P+++ +  L++      +  +A ++  EM+ +  APD
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 147/284 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L      + +  +A     +M + G  P + +    +         + AL
Sbjct: 363 CLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENAL 422

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  + R R+ P+V T N ++   C+ G + +A E++ +M +   +P+  TY+ LI  H
Sbjct: 423 QLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSH 482

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M K G  PN+ T+N++I G+C+ G + +  +   +M+  NV P++
Sbjct: 483 CEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDL 542

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+NTLI+GY +  N     +++  M +  ++ D +TYN +I G  ++G  + A  + K 
Sbjct: 543 ITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKG 602

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +  + + P+  TY +LI G     NS++AFQL+  MI  G  P+
Sbjct: 603 MGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 229/454 (50%), Gaps = 22/454 (4%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH-KPSSLTLETHSIVLHILTKNRKFKSS 159
           S HLT   ++   L++     LS        +H +P SL+   +SI+LHILT  R F  +
Sbjct: 66  SDHLTDSLLRR--LRLHPSACLSFFHLATQNSHYRPHSLS---YSILLHILTHARLFPEA 120

Query: 160 ESILRGILD------SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
            ++LR ++D        ++ + + +F S+   +  C     VFD+L K +A R   ++A 
Sbjct: 121 TTVLRQLMDLHCTNNYRAYAVCNHVF-SVYKEFGFCSG---VFDMLMKAFAERGMTKHAL 176

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F +M   G +P + SC+  L  L+      +A+  + ++    I P+VY  ++V++A 
Sbjct: 177 YVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAH 236

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C++G ++ A+EV + M   G  P+V TYN L++G+  +G      +   LM + G+  NV
Sbjct: 237 CQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNV 296

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATN-VSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           +T   L+ G+CKKGK+ EA ++  E++    +  +   Y  L++GY Q+G  E    + +
Sbjct: 297 VTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRD 356

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EMLR G+KV+++  N LI G CK G+  +A  +   +   +L P+  +Y+ L+ G C   
Sbjct: 357 EMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREG 416

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
              +AF L + M+  G  P    +  ++        +D A  +   M+E+ + P+ I   
Sbjct: 417 KVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCC 476

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
            +       G  + AM L+++     +L +GF K
Sbjct: 477 TMLDCFFKMGDSDRAMMLWKE-----ILGRGFTK 505



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 151/342 (44%), Gaps = 35/342 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+ +L   Y    +  +A     +M   G    +  CN  +       +V  A   +  M
Sbjct: 334 VYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGM 393

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+ Y+ N ++  +C+ G + +A  + + M   G  P+V TYNT+I G  + G  
Sbjct: 394 VDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSY 453

Query: 315 SLAMKFKNLMEKNGIQPNVIT-----------------------------------FNTL 339
             A+   +LM + G+ PN I+                                   FNT+
Sbjct: 454 DDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTM 513

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK GKL EA  +F  MK   +SP+ +TY TL +GY + GN +    +   M R  +
Sbjct: 514 ISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAM 573

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              I  YN+LI GL K  K      L+ ++    L PN  TY  LI+G C  +  ++AF 
Sbjct: 574 SASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFH 633

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           LY  MI  G  PN  +   ++S+  +++    A  +L +ML+
Sbjct: 634 LYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLD 675



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 166/360 (46%), Gaps = 1/360 (0%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL-SSLLDS 241
           L S R    + +   +L + Y  + K   A     ++ +   L + E     L       
Sbjct: 286 LMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQM 345

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R++ A+    EM R  +  N+   N ++  +CKLG +  A  VF  M      P   +Y
Sbjct: 346 GRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSY 405

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NTL+ G+C +G +S A      M  +GI P V+T+NT+I G    G   +A  ++  M  
Sbjct: 406 NTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVE 465

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V+PN ++  T+++ + ++G+S+    L++E+L  G     + +N +I GLCK GK  +
Sbjct: 466 RGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLME 525

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  +   + +  L P+  TY  L  G C   N + AFQ+   M R     +  ++  L+ 
Sbjct: 526 AGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLID 585

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    +   ++L+EM  + ++P+ +    L SG     K + A  L+ +M  RG  P
Sbjct: 586 GLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTP 645



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 172/400 (43%), Gaps = 35/400 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K       + +A   +  M + G  P   SC   L         D A+  +KE
Sbjct: 438 VTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKE 497

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +     + +    N ++   CK+G +  A  VF  M+ +G  P   TY TL  G+C  G 
Sbjct: 498 ILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGN 557

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A + K +ME+  +  ++  +N+LI G  K  KL++   +  EM+   +SPNVVTY T
Sbjct: 558 VQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGT 617

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY--------- 424
           LI+G+      +    LY EM+  G   +++  + ++  L ++ +  +A           
Sbjct: 618 LISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFD 677

Query: 425 -----------LVKD------------LDKNSL---VPNASTYSALITGQCVRKNSERAF 458
                      LVK+            LDK+ +   + N   Y+  I G C     + A 
Sbjct: 678 ILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEAR 737

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            +   ++  G  P+   +  L+     + + D A ++  EMLEK + P+  I + L +GL
Sbjct: 738 SVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGL 797

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
              G  + A +LF K+  +GL+P        I C    G+
Sbjct: 798 CKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGD 837



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 138/309 (44%), Gaps = 23/309 (7%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           ++G+++  +     ++++S++             D LFK     +K  + TD   +M+  
Sbjct: 564 IKGVMERQAMSASIEMYNSLI-------------DGLFKI----RKLNDVTDLLVEMQTR 606

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + +    +S   D +++D A   Y EM     +PNV   + ++ +  +   I  A
Sbjct: 607 GLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEA 666

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI---QPNVITFNTL 339
             +   M     +     +N          L   A K  + ++K+ I     N I +N  
Sbjct: 667 TVILDKMLDFDIL---AVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIA 723

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK GKL EA  + S + +    P+  TY TLI+     GN +    L +EML  G+
Sbjct: 724 IDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGL 783

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +I  YNALI GLCK G   +A  L   L +  LVPNA TY+ LI   C   + ++A +
Sbjct: 784 IPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASR 843

Query: 460 LYKSMIRSG 468
           L + M   G
Sbjct: 844 LREKMTEEG 852



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/346 (22%), Positives = 138/346 (39%), Gaps = 35/346 (10%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ +        K   A   F +M++ G  P   +          +  V  A    
Sbjct: 506 STVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIK 565

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M R  +S ++   N ++    K+  +    ++   M++ G  P+V TY TLISG C++
Sbjct: 566 GVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDE 625

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM------------ 359
             L  A      M + G  PNV+  + ++    +  ++ EA  I  +M            
Sbjct: 626 QKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKC 685

Query: 360 -----------------------KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                                     N   N + YN  I+G  + G  +   S+   ++ 
Sbjct: 686 SDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMS 745

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   D  TY  LI      G   +A  L  ++ +  L+PN + Y+ALI G C   N +R
Sbjct: 746 RGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDR 805

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           A +L+  + + G  PN   + +L+  +C+  D D+A+ +  +M E+
Sbjct: 806 AQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEE 851



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 2/198 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESC-NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +   AT    +M D+  L +   C +K + + L  E   IA    K    N +S N+   
Sbjct: 662 RISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNI-VY 720

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+ +   CK G ++ A  V   + S GF+P   TY TLI      G +  A K ++ M +
Sbjct: 721 NIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G+ PN+  +N LI G CK G +  A R+F ++    + PN VTYN LI  Y ++G+ + 
Sbjct: 781 KGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDK 840

Query: 387 GASLYEEMLRNGIKVDIL 404
            + L E+M   GI   I+
Sbjct: 841 ASRLREKMTEEGISTRII 858


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 175/348 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K      ++  A + F  M   G  P + S N  +     +  ++ AL FYKE
Sbjct: 230 VTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR  R++P+V + + ++  F + G ++ A E  + M   G +P    Y  +I G C  GL
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++ ++ M   G  P+V+T+NTL+ G CK+ +L +A  + +EMK   V P++ T+ T
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E     ++ +    ++ DI+TYN LI G+C++G   KA  L  D+    
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TYS LI   C +   + AF     M+  G  PN   +  ++  +C++ +  +  
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +M    + PD I  + L  G    GK   A  L + ME   + P
Sbjct: 530 QFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQP 577



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 194/393 (49%), Gaps = 6/393 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQ 218
           S+L+G+L +  +D   ++F ++      C  +P V  F++L   +    +   A   + +
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAM----DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKE 289

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR     P + S +  +        +D A  + +EMR   + P+     MV+  FC+ G+
Sbjct: 290 MRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGL 349

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+ V   M + G +P V TYNTL++G C +  LS A +  N M++ G+ P++ TF T
Sbjct: 350 MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTT 409

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+C+ G + +A + F  +    + P++VTYNTLI+G  + G+      L+++M    
Sbjct: 410 LIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSRE 469

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  + +TY+ LI   C++G+   A   + ++    +VPN  TY+++I G C   N  +  
Sbjct: 470 IFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQ 529

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q    M      P+   +  L+  + +      A  +L  M  + + PD++  + + SG 
Sbjct: 530 QFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
              G  + A  +++KM  RG+ P  +  +  IN
Sbjct: 590 SVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 157/290 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  +G LP + + N  L+ L    R+  A     EM+   + P++ T   ++H +C+ G
Sbjct: 359 EMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDG 418

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            IE+A++ F  +      P + TYNTLI G C +G L  A +  + M    I PN +T++
Sbjct: 419 NIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYS 478

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++  A     EM    + PN++TYN++I GY + GN   G     +M  +
Sbjct: 479 ILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHD 538

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++TYN LI G  KEGK  +A  L+K ++  ++ P+A TY+ +I+G  V  N + A
Sbjct: 539 KVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEA 598

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
             +YK M   G  P+++ +  +++      +  ++ ++  EML+K +APD
Sbjct: 599 DWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 149/284 (52%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L       ++  +A +   +M++ G  P + +    +        ++ AL
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+  +   R+ P++ T N ++   C+ G + +A E++ +M S    P+  TY+ LI  H
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M   GI PN++T+N++I G+C+ G + +  +   +M+   V P++
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDL 544

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLI+GY + G      +L + M    ++ D +TYN +I G    G  ++A ++ K 
Sbjct: 545 ITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKK 604

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +    + P+  TY ++I G  V  NS+++FQL+  M++ G  P+
Sbjct: 605 MGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 173/364 (47%), Gaps = 9/364 (2%)

Query: 185 SYRMCDSS-----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +YR+  SS         +++  +Y    +F        +M      P + + N  + +  
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  V+ A+     M    I P + T N V+    + G  ++A EVF+ M++ G  P V 
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           ++N LI G C  G L  A++F   M    + P+V++F+ LI  F ++G++  A     EM
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   + P+ V Y  +I G+ + G       + +EM+  G   D++TYN L+ GLCKE + 
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L+ ++ +  + P+  T++ LI G C   N E+A Q + ++     RP+   +  L
Sbjct: 386 SDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTL 445

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIR 537
           +   C+  D  +A E+  +M  + + P+ +  S L     HC K ++  A     +M  +
Sbjct: 446 IDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDS--HCEKGQVDNAFAFLDEMVNK 503

Query: 538 GLLP 541
           G++P
Sbjct: 504 GIVP 507



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 168/350 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P VFDLL +TY   +K R A + F  + D+       + N  L++L  +    +    Y
Sbjct: 88  QPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAY 147

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +  +    N YTLN+++H++CK         V   ME     P V T+N ++      
Sbjct: 148 RLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRA 207

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  AM   + M   GI+P ++T+N+++ G  + G+  +A  +F  M A  V+P+V ++
Sbjct: 208 GDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSF 267

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI G+ + G  E     Y+EM    +  D+++++ LI    + G+   AA  ++++ +
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMRE 327

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L+P+   Y+ +I G C       A ++   M+  GC P+   +  L++  C+      
Sbjct: 328 FGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSD 387

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A E+L EM E+ + PD    + L  G    G  E A++ F  +  + L P
Sbjct: 388 AEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRP 437



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 90/199 (45%)

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G  H     +  + ++N   N  T N +++ Y +        ++  EM +  +  D++
Sbjct: 136 RAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVV 195

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+N ++    + G  + A  L+  +    + P   TY++++ G       ++A +++++M
Sbjct: 196 THNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM 255

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G  P+   F ML+  FC+  + + A     EM  + + PD +  S L       G+ 
Sbjct: 256 DACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEM 315

Query: 525 ELAMKLFRKMEIRGLLPKG 543
           + A +  R+M   GL+P G
Sbjct: 316 DHAAEYLREMREFGLMPDG 334


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 198/401 (49%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+E++ IV HIL   R +  + SILR I+ S +      +FD +  +  +C     VFD 
Sbjct: 9   TIESYCIVAHILFCARMYYDANSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDA 68

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LF           AT  F +M+ +   P   SCN  L       + D    F+K+M    
Sbjct: 69  LFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAG 128

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P V+T N+++    K G IE A  +F+ M+  G IP   TYN++I G+   G L   +
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            F   M+    +P+VIT+N+LI  FCK GKL +    + EMK + + PNVV+Y+TL++ +
Sbjct: 189 YFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAF 248

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    +     Y +M R G   +  TY +L+   CK G    A  L  ++ +  +  N 
Sbjct: 249 CKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNV 308

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ALI G C  +  + A +L+  M+ +G  PN   +  L+  F + ++ DRA E+L E
Sbjct: 309 VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 368

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  + + PD ++      GL    K E A  +  +M+  G+
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGI 409



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 2/313 (0%)

Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           S P VF  +++            A   F +M+  G +P   + N  +       R+D  +
Sbjct: 129 SKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTV 188

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM+     P+V T N +++ FCK G + + +E ++ M+  G  P+V +Y+TL+   
Sbjct: 189 YFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAF 248

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C + ++  A+KF   M + G  PN  T+ +L+   CK G L +A R+ +EM    V  NV
Sbjct: 249 CKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNV 308

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G       +    L+ +M+  G+  ++ +YNALI G  K     +A  L+ +
Sbjct: 309 VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 368

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+   Y   I G C  +  E A  +   M  +G + N  I+  LM  + ++ +
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428

Query: 489 FDRAAEVLLEMLE 501
                 +L EM E
Sbjct: 429 PTEGLHLLEEMQE 441



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 177/412 (42%), Gaps = 40/412 (9%)

Query: 170 DSFDLPSKLFDSILYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D +    +L D++ +   M    C+   + ++ L   +    K     + + +M+  G  
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLK 235

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S +  + +    + +  A+ FY +MRR    PN +T   ++ A CK+G +  A  +
Sbjct: 236 PNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRL 295

Query: 286 FKNMESMGFIPSVTTYNTLISGHCN--------------------------KGLLSLAMK 319
              M  +G   +V TY  LI G C+                            L+   +K
Sbjct: 296 ANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVK 355

Query: 320 FKNL---------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            KN+         ++  GIQP+++ + T I+G C   K+  A  + +EM+   +  N + 
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDL 429
           Y TL++ Y + GN   G  L EEM     +V ++T+  LI GLCK     KA  Y  +  
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           +   L PNA+ Y+A+I G C     + A  L++ M + G  P++  +  LM    +  + 
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A  +  +M E  M  D +  + L  G   C + + A     +M    +LP
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILP 587



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/278 (22%), Positives = 133/278 (47%), Gaps = 3/278 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+ D++      KLF  ++ +  + + +   ++ L   +   K    A +   +++
Sbjct: 313 ALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS--YNALIHGFVKAKNMDRALELLNELK 370

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P +     F+  L   E+++ A     EM+ N I  N      +M A+ K G   
Sbjct: 371 GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPT 430

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTL 339
             + + + M+ +    +V T+  LI G C   L+S A+ +   M  + G+QPN   +  +
Sbjct: 431 EGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAM 490

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+ ++  A  +F +M    + P+   Y +L++G  + GN     +L ++M   G+
Sbjct: 491 IDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGM 550

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           K+D+L Y +L+ G  +  + +KA   ++++    ++P+
Sbjct: 551 KLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPD 588



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 4/221 (1%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L       G L EA + FS+MK   V P   + N L++ + ++G ++
Sbjct: 56  RNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 115

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                +++M+  G K  + TYN +I  + KEG  + A  L +++    L+P+  TY+++I
Sbjct: 116 GVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMI 175

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       +     ++ M    C P+   +  L++ FC++    +  E   EM +  + 
Sbjct: 176 DGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLK 235

Query: 506 PDSIILSELYSGLHHCGKD--ELAMKLFRKMEIRGLLPKGF 544
           P+ +  S L      C +D  + A+K +  M   G +P  F
Sbjct: 236 PNVVSYSTLVDAF--CKEDMMQQAIKFYVDMRRVGHVPNEF 274



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 68/137 (49%), Gaps = 1/137 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            +  L  ++ V  A+ ++  M  +  + PN      ++   CK   ++ A  +F+ M   
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P  T Y +L+ G+  +G +  A+  ++ M + G++ +++ + +L++GF +  +L +A
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573

Query: 353 NRIFSEMKATNVSPNVV 369
                EM    + P+ V
Sbjct: 574 RSFLEEMIGEEILPDEV 590


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 200/422 (47%), Gaps = 6/422 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           +LE F  V      +   + +S ++H+LT  + +  +  ++R ++        S++  S+
Sbjct: 53  ALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSV 112

Query: 183 LYSYRMCDSS---PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
                  +SS   P VF +L   ++       A   + +M     LP +++CN  L  L+
Sbjct: 113 FNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
              R D     Y +M     SPNV T   ++   C+ G   +A  +F  M      P+V 
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y  LI G C +  +S A      M  +G+ PN+ T+NT++ G+CK   + +A  ++ EM
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               + PNVVT+  LI+G  +            +M   G+  +I  YN LI G CK G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L  +++K+ ++P+  TYS LI G C     E A  L + M + G  PN   +  L
Sbjct: 350 SEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTL 409

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  +C+  + ++A EV  +M EK + P+ I  S L  G    GK E AM L+ +M I+GL
Sbjct: 410 IDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGL 469

Query: 540 LP 541
           LP
Sbjct: 470 LP 471



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 179/364 (49%), Gaps = 13/364 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L +      +   A   F  MR+ G LP + + N  +        V  AL  Y+E
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + PNV T  +++   CK   +  A +   +M S G +P++  YN LI G+C  G 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGN 348

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A+   + +EK+ I P+V T++ LI G C   ++ EA+ +  EMK     PN VTYNT
Sbjct: 349 LSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNT 408

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY + GN E    +  +M   GI+ +I+T++ LI G CK GK + A  L  ++    
Sbjct: 409 LIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+   Y+ALI G     N++ AF+L+K M  +G  PN      L+   C++     A 
Sbjct: 469 LLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528

Query: 494 EVLL-------------EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           ++ L             E+     +P+ ++ + L  GL   G+   A K F  M   GL 
Sbjct: 529 KLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLR 588

Query: 541 PKGF 544
           P  F
Sbjct: 589 PDVF 592



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 154/338 (45%), Gaps = 48/338 (14%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F +L        +  +A      M  +G +P I   N  +     +  +  AL  + E
Sbjct: 299 VTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSE 358

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + ++ I P+V+T ++++   C +  +E A  + + M+  GF+P+  TYNTLI G+C +G 
Sbjct: 359 IEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGN 418

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  + M + GI+PN+ITF+TLI G+CK GK+  A  +++EM    + P+VV Y  
Sbjct: 419 MEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTA 478

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILT---------------------------- 405
           LI+G+ + GN++    L++EM   G+  ++ T                            
Sbjct: 479 LIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTD 538

Query: 406 --------------------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                               Y ALI GLC +G+  KA+    D+  + L P+  T   +I
Sbjct: 539 TTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVII 598

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            G     +      L   +++ G  PN  ++ +L   +
Sbjct: 599 QGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGY 636



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 5/260 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +ES  F P+V  +  LI      GL+  A+     M+   + P +   N ++ G  
Sbjct: 115 VLSRLESSKFTPNV--FGVLIIAFSEMGLVEEALWVYYKMD---VLPAMQACNMVLDGLV 169

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           KKG+     +++ +M A   SPNVVTY TLI+G  + G+      L++EM+   I   ++
Sbjct: 170 KKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVV 229

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            Y  LI GLC E +  +A  + + +  + ++PN  TY+ ++ G C   + ++A +LY+ M
Sbjct: 230 IYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEM 289

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  G  PN   F +L+   C+ ++   A + L++M    + P+  + + L  G    G  
Sbjct: 290 LGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNL 349

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A+ L  ++E   +LP  F
Sbjct: 350 SEALSLHSEIEKHEILPDVF 369



 Score = 88.6 bits (218), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 13/251 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + ++ L   Y        A +   QM + G  P I + +  +     + +++ A+G Y
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + P+V     ++    K G  + A  + K M+  G  P+V T + LI G C  
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 312 GLLSLAMKF-------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           G +S A+K               N ++++   PN + +  LI G C  G++ +A++ FS+
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M+ + + P+V T   +I G+ +  +      L  ++L+ GI  +   Y  L  G  + G 
Sbjct: 582 MRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGY 641

Query: 419 TKKAAYLVKDL 429
            K A    +DL
Sbjct: 642 LKSALRCSEDL 652


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 190/393 (48%), Gaps = 6/393 (1%)

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
           T NR+  S  +I+ G+      D   ++F  +    R        + +L    A   K  
Sbjct: 147 TPNRR--SHNTIILGLCQQSKIDQACQVFHEM--EARDIPPDSWSYGILIDGLAKAGKLN 202

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A   F +M D G  P   + N  +  +  +  +D AL  +K MR     P+ +T N+++
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            A CK G ++ A  + K M   G +P V TY+TLISG C+   +  A      M K   +
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P V+T NTLI G CK G++ EA  +   M ++  SP+VVTYNTL++G+ + G +E    L
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M+  G+  +++TY AL+ GLCK  +  +A  +   +  +   PN  TY+ALI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE--KCMAPDS 508
               +   +L+  M+ +G  P+  ++  L +  C++    RA E+L E  E  +  A   
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 502

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +      GL   GK E+A+   R M   G LP
Sbjct: 503 EVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/416 (28%), Positives = 190/416 (45%), Gaps = 37/416 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  ++SFD   +LF  +  + R C  SP+ ++++      R     A D   +M 
Sbjct: 50  SLIHGLCMANSFDDARELFADM--NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P + + N  +  L  S RV+ AL  + EM R   +PN  + N ++   C+   I+
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 281 RAVEVFKNMESM-----------------------------------GFIPSVTTYNTLI 305
           +A +VF  ME+                                    G  PS  TYN +I
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C    L  A++    M   G +P+  TFN LI   CK+GK+ EA R+   M      
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VVTY+TLI+G   +   +    L E+M++   K  ++T N LI GLCK G+ K+A  +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  +  +   P+  TY+ L+ G C    +ERA +L   M+  G  PN   +  L+S  C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 A  V  +M     AP+    + L  G    G+ +  +KLF +M   G+ P
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 172/381 (45%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L    A   K  +A D F ++   G  P   +    +  L  +   D A   + +M 
Sbjct: 13  YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P+  T N+++ A CK G++E A ++ K M   G +P V TYNT++ G C  G + 
Sbjct: 73  RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   N ME+ G  PN  + NT+I G C++ K+ +A ++F EM+A ++ P+  +Y  LI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL---------------------- 413
           +G  + G       L+  ML +GI    +TYN +I G+                      
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 414 -------------CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
                        CK GK  +A  L+K +  +  VP+  TYS LI+G C     + A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M++  C+P       L+   C+      A EVL  M+    +PD +  + L  G   
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+ E A +L   M  RGL P
Sbjct: 373 AGQTERARELLSDMVARGLAP 393



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 177/382 (46%), Gaps = 25/382 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDLPSKLFDSI 182
           ++ I++  L K  K   +  + R +LDS                    + D   +LF S+
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
               + C  S   F++L   +  R K   A     +M D G +P + + +  +S L    
Sbjct: 247 --RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           RVD A    ++M + +  P V T N ++H  CK G I+ A EV   M S G  P V TYN
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TL+ GHC  G    A +  + M   G+ PNV+T+  L+ G CK  +L EA  +F++MK++
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PN+ TY  LI G+   G  + G  L+ EM+  GI  D + Y  L   LCK G++ +A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484

Query: 423 AYLVKDLDKNSLVPNA---STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             ++++  + SL   A     Y   + G       E A    + M+R G  P       L
Sbjct: 485 LEILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 480 MSTFCQNEDFDRAAEVLLEMLE 501
           ++  C++     A  VL E+++
Sbjct: 544 VAGLCKSGQGGEARAVLEEIMD 565



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 145/323 (44%), Gaps = 35/323 (10%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +SP+ ++  +++    K G +  A ++F+ +   G  PS   Y +LI G C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A +    M + G  P+ +T+N +I   CK+G L EA  +  +M      P+VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK-- 431
           +++G  + G  E    L+ EM R G   +  ++N +ILGLC++ K  +A  +  +++   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 432 ---------------------------------NSLVPNASTYSALITGQCVRKNSERAF 458
                                            + + P+A TY+ +I G C+    + A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L+KSM   GCRP++  F +L+   C+    D A  +L  M +    PD +  S L SGL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + + A  L   M  R   P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKP 323



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 122/249 (48%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   +Y  LI G    G L+ A      +  +G+ P+ + + +LI G C      +A  +
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F++M      P+ VTYN +I+   + G  E    L ++M+ +G   D++TYN ++ GLCK
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+ ++A  L  ++++    PN  +++ +I G C +   ++A Q++  M      P+   
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +L+    +    + A ++   ML+  + P ++  + +  G+      + A++LF+ M 
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 536 IRGLLPKGF 544
            +G  P  F
Sbjct: 248 SKGCRPSRF 256



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 59/260 (22%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVF 196
           T+ T + ++H L K  + K +  +L  ++ S                      SP  + +
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ--------------------SPDVVTY 363

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L   +    +   A +    M   G  P + +    +S L  + R+  A G + +M+ 
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL------------ 304
           +  +PN++T   ++  FC  G ++  +++F  M   G  P    Y TL            
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 305 -------------------------ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                                    + G  + G + +A+ F   M + G  P      +L
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 340 IFGFCKKGKLHEANRIFSEM 359
           + G CK G+  EA  +  E+
Sbjct: 544 VAGLCKSGQGGEARAVLEEI 563


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 223/445 (50%), Gaps = 7/445 (1%)

Query: 96  KLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
           +L + S  LTP  +   L +V+ D   ++  F       P   +L  H+ +LHIL + R+
Sbjct: 82  RLLSSSAPLTPALLHAALRRVRLDADAAVHLFRLA----PFPPSLLAHAQLLHILVRARR 137

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
              + +IL  +L +     P  LF  ++  Y+    S   FDLL +  A+  +   A   
Sbjct: 138 SADARAILASLLSARPPAPP--LFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQV 195

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +MR  G    + SCN  L+ L  +  +   +  +++M+R    P+ +T+ ++  A+CK
Sbjct: 196 FDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCK 255

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           +  +  A+E  + M  MG   ++  Y+ +++G+C  G  + A +  + +   G  PN++T
Sbjct: 256 VKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVT 315

Query: 336 FNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           +  L+ G+C +  + EA  +  E+ K   +  +   +  +INGY Q+G  E  A L  EM
Sbjct: 316 YTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEM 375

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + + ++V++  YN +I G CK G+  +A  ++ ++    + P+  +Y++L+ G C +   
Sbjct: 376 VDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLM 435

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +AF+ Y +M+R+G       +  L+  FC     D A  +   ML+K +AP+ I  S L
Sbjct: 436 NKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTL 495

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGL 539
             G    GK E A+ L+++   RGL
Sbjct: 496 LDGFFKSGKTEKALNLWKETLARGL 520



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 189/387 (48%), Gaps = 9/387 (2%)

Query: 187 RMCDSSP--------LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC-NKFLSS 237
           RM DS P        + + LL K Y + K    A     ++R    L + E+     ++ 
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVING 358

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                R++ A     EM  +R+  N++  N++++ +CKLG +  A  +   M  +G  P 
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPD 418

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             +YN+L+ G+C KGL++ A +  N M +NG     +T+N L+ GFC  G + +A R++ 
Sbjct: 419 TYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWF 478

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    ++PN ++ +TL++G+ + G +E   +L++E L  G+  +  T+N +I GLCK  
Sbjct: 479 LMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIE 538

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +  +A  LV  + +    P+  TY  L +G C   + +RA ++   +   G  P    F 
Sbjct: 539 RMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFN 598

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++     +   +  ++L EM  + ++P+++    L +G    G    A  L+ +M  +
Sbjct: 599 SLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEK 658

Query: 538 GLLPKGFDKLRTINCAPENGEKESGGL 564
           GL+P  F     ++C    G+ +   L
Sbjct: 659 GLVPNLFICSSLVSCFYRKGKFDEANL 685



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 164/347 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF  +   Y    +  +A     +M D      +   N  ++      R+  A     EM
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+ Y+ N ++  +CK G++ +A E +  M   GF  +  TYN L+ G C+ G +
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++   LM K GI PN I+ +TL+ GF K GK  +A  ++ E  A  ++ N  T+NT+
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING  ++        L ++M +     DI+TY  L  G CK G   +A+ ++ +L+    
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P    +++LITG  + K   +   +   M   G  PN   +  L++ +C+  D   A  
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + LEM+EK + P+  I S L S  +  GK + A  + + +    ++P
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIP 697



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 168/384 (43%), Gaps = 18/384 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPL--- 194
           T+++++      +  + +E +++ I  +    +   +F +++  Y    RM D++ L   
Sbjct: 315 TYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE 374

Query: 195 -----------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                      V++++   Y    +   A +   +M   G  P   S N  +        
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           ++ A   Y  M RN  +    T N ++  FC LG I+ A+ ++  M   G  P+  + +T
Sbjct: 435 MNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCST 494

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+ G    G    A+         G+  N  TFNT+I G CK  ++ EA  +  +MK   
Sbjct: 495 LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR 554

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+++TY TL +GY ++G+ +  + +  E+   G    I  +N+LI G     +  K  
Sbjct: 555 CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVN 614

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ ++    L PN   Y ALI G C   +   A+ LY  MI  G  PN  I   L+S F
Sbjct: 615 DILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCF 674

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPD 507
            +   FD A  VL  ++   M PD
Sbjct: 675 YRKGKFDEANLVLQNLVGTDMIPD 698



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 186/423 (43%), Gaps = 35/423 (8%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           FF   +T K  +L  ET   +   L KN    +  +++ G+   +      +L D  +  
Sbjct: 499 FFKSGKTEKALNLWKET---LARGLAKNTT--TFNTVINGLCKIERMPEAEELVDK-MKQ 552

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +R C    + +  LF  Y        A+    ++ + GF P IE  N  ++    +++  
Sbjct: 553 WR-CPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG 611

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                  EM    +SPN      ++  +CK G +  A  ++  M   G +P++   ++L+
Sbjct: 612 KVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671

Query: 306 SGHCNKGLLSLA-MKFKNLMEKNGIQPNV--------------------------ITFNT 338
           S    KG    A +  +NL+  + I P++                          I +N 
Sbjct: 672 SCFYRKGKFDEANLVLQNLVGTDMI-PDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNI 730

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +IFG CK G++ +A  + +++K      +  TY++LI+G    G  ++   L + ML  G
Sbjct: 731 VIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVG 790

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  +I+TYN+LI GLCK G+  +A  L K L    + PNA TY+ LI   C       AF
Sbjct: 791 LTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAF 850

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L + MI  G  P    + +L++  C     + A ++L +M+E  + P+ +    L  G 
Sbjct: 851 KLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGY 910

Query: 519 HHC 521
             C
Sbjct: 911 VRC 913



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/364 (24%), Positives = 154/364 (42%), Gaps = 61/364 (16%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L   ER+  A     +M++ R  P++ T   +   +CK+G ++RA  +   +E+
Sbjct: 528 NTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELEN 587

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +GF P++  +N+LI+GH               M   G+ PN + +  LI G+CK+G LH 
Sbjct: 588 LGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHT 647

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI-------- 403
           A  ++ EM    + PN+   ++L++ + + G  +    + + ++   +  DI        
Sbjct: 648 AYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIG 707

Query: 404 ------------------LTYNALILGLCKEGKTKKAAYLVKDL-DKN------------ 432
                             + +N +I GLCK G+ + A  L+ DL DK             
Sbjct: 708 KVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLI 767

Query: 433 ----------------------SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
                                  L PN  TY++LI G C      RA  L+K +   G  
Sbjct: 768 HGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGIS 827

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   +  L+   C++     A ++   M+E+ + P     S L +GL   G  E A+KL
Sbjct: 828 PNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKL 887

Query: 531 FRKM 534
             +M
Sbjct: 888 LDQM 891



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 161/379 (42%), Gaps = 26/379 (6%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ L ++ L K +       +A   +  M   G  P   SC+  L     S + + AL  
Sbjct: 452 ATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNL 511

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +KE     ++ N  T N V++  CK+  +  A E+   M+     P + TY TL SG+C 
Sbjct: 512 WKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCK 571

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G +  A +  N +E  G  P +  FN+LI G     +  + N I  EM    +SPN V 
Sbjct: 572 IGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVA 631

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI G+ + G+     +LY EM+  G+  ++   ++L+    ++GK  +A  ++++L 
Sbjct: 632 YGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLV 691

Query: 431 KNSLVPNAST--------------------------YSALITGQCVRKNSERAFQLYKSM 464
              ++P+ S                           ++ +I G C     E A  L   +
Sbjct: 692 GTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADL 751

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   +   +  L+     +   D A ++   ML   + P+ +  + L  GL   G+ 
Sbjct: 752 KDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGEL 811

Query: 525 ELAMKLFRKMEIRGLLPKG 543
             A+ LF+K+  +G+ P  
Sbjct: 812 SRAVSLFKKLWTKGISPNA 830


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 17/419 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLF--------DSILYSYR 187
           L  ++ V++ L K+     +E+I++ + +S    D+F   S +         DS L  + 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 188 M-----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                 C+ + + +  L        +   A D   +M  +G LP   +C   + +L D  
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             + A   + +M+     PNVYT   ++   C  G+++ A+ +F  M   G  P+  TYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+       +  A    NLM +NG  PN++T+N +I G+C  G   +A  + + M   
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             S N+VTYNT+I GY   GN+     + + M   G K D  +Y  LI G CK  K + A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++  + L PN  TY+ALI G C  +  + A  L + M RSGCRPN   + +L+  
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  +F  A E+   M+E+ + P+ +  + +  GL   G   LA+++F KM  +G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 169/353 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L          + A   F +M   G  P   + N  ++ L+++ R+  A 
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M RN  SPN+ T N ++  +C LG  ++A+ V  NM   G   ++ TYNT+I G+
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G  + A++  +LM   G +P+  ++  LI GFCK  K+  A  +F+EM    + PN 
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+GY +    +   SL E M R+G + ++ TYN LI GL K+     A  L K 
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + PN  TY+A+I G C   ++  A +++  MI  GC PN   +  L+    Q   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A  +  E+    + PD I   ++       GK E A     +M   G  P
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 161 SILRGILDS----DSFDLPSKL-FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           +++ G+ DS    ++FDL  ++    IL +   C + P++             + +A   
Sbjct: 290 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTC-TGPII------ALCDMGCYEDAWRL 342

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F  M++ G  P + +    +S L  S  + +A+G +  M R+ + PN  T N +++   +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              I+ A  V   M   G  P++ TYN +I G+C  G    AM   N M + G   N++T
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT+I G+C  G    A RI   M+     P+  +Y  LI G+ ++   E    L+ EM+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G+  + +TY ALI G CK+ K   A  L++ + ++   PN  TY+ LI G   + N  
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A +L K MI  G  PN   +  ++   C+N     A E+  +M+E+   P+ +  S L 
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             L   GK E A  LF ++E  GL+P     ++ I     +G+ E
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 18/339 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ +++IL +NR+ K +  +L                   L     C  + + ++ + K
Sbjct: 392 TYNALINILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIK 433

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      + A      M   G    + + N  +    DS     AL     MR     P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + ++   ++  FCK+  +E A  +F  M   G  P+  TY  LI G+C    L  A    
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+++G +PNV T+N LI G  K+     A  +   M    + PNVVTY  +I+G  + 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++ +   ++ +M+  G   ++LTY++LI  L +EGK ++A  L  +L+++ L+P+  TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             +I    +    E AF     MI++GC+P    + +L+
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D + +M   G  P +   N  +++L     V  A    K++  + +SP+ +T   ++   
Sbjct: 201 DRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGH 260

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+   ++ A++VF  M   G  P+  TY+TLI+G C+ G ++ A      M  +GI P  
Sbjct: 261 CRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTA 320

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T    I   C  G   +A R+F +MK     PNV TY  LI+G    G  ++   L+  
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R+G+  + +TYNALI  L +  + K A  ++  + +N   PN  TY+ +I G C+  +
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++A  +  +M++ G   N   +  ++  +C + +   A  +L  M +    PD    +E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G     K E A  LF +M   GL P
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCP 528



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 179/440 (40%), Gaps = 61/440 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I++G  DS +     ++ D  L     C      +  L   +    K  +A   F +M 
Sbjct: 465 TIIKGYCDSGNTTSALRILD--LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   +    +      E++D A    + M+R+   PNV T N+++H   K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+ K M   G  P+V TY  +I G C  G  SLA++  N M + G  PN++T+++LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               ++GK+ EA  +F+E++   + P+ +TY  +I  Y   G  E   +    M++ G +
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 401 VDILTYNALILGLCKE---GKTKKAA-----------YLVKDLD---------------- 430
             + TY  LI GL  E      + AA           Y   D D                
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762

Query: 431 ----KNSLVPNAST-------------------------YSALITGQCVRKNSERAFQLY 461
               +N+LV N ST                         Y++L+      +N + A  ++
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M   GC  + + ++ L+   CQ      A      ML +   PD ++ + L  GL   
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  +L M+    ME R  +P
Sbjct: 883 GYKDLCMEFLHIMETRRYMP 902



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 7/312 (2%)

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           +I+SC+         E +   + F   + ++ +   ++  + ++    +LG+    ++ +
Sbjct: 151 LIKSCHS-------KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY 203

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S G  P++  YN +I+  C  G ++ A      + ++ + P+  T+ ++I G C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             L  A ++F++M      PN VTY+TLING    G       L  EM+ +GI     T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
              I+ LC  G  + A  L  D+      PN  TY+ALI+G CV    + A  L+  M R
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L++   +N     A  VL  M     +P+ +  +E+  G    G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 527 AMKLFRKMEIRG 538
           AM +   M  RG
Sbjct: 444 AMLVMNNMLQRG 455



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 112/253 (44%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI    +K  ++  M F +++ ++G++  +  ++ L+    + G        +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN++ YN +IN   + GN     ++ +++  + +  D  TY ++ILG C++     A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + K    PN  TYS LI G C       AF L + MI  G  P  H     +   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C    ++ A  + ++M  K   P+    + L SGL   G  ++A+ LF +M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 544 FDKLRTINCAPEN 556
                 IN   EN
Sbjct: 391 VTYNALINILVEN 403



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/368 (19%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           ++T+++++H LTK   F  +E + + +++   F                   + + +  +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF------------------PNVVTYTAM 606

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                       A + F +M + G LP + + +  + +L    +V+ A   + E+ R+ +
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+  T   ++ A+   G +E A      M   G  P++ TY  LI G  N+ LL+    
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA---- 722

Query: 320 FKNLMEKNGIQPN----------------------------VITFNTLIFGFCKKGKLHE 351
            + L     + PN                            V   N L+      G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN +   M +  + P+   YN+L+    +V N ++   +++ M   G +V +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC+  + K+A    +++   +  P+    + LI G       +   +    M      P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902

Query: 472 NKHIFEML 479
           + HI+ +L
Sbjct: 903 SFHIYTIL 910



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 57/139 (41%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++  A +    M   G  P  E+ N  L SLL    VD+A+G +K M       ++    
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ A C+L   + A   F+NM    + P       LI G    G   L M+F ++ME  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 328 GIQPNVITFNTLIFGFCKK 346
              P+   +  L     KK
Sbjct: 899 RYMPSFHIYTILAREASKK 917


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 200/419 (47%), Gaps = 17/419 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLF--------DSILYSYR 187
           L  ++ V++ L K+     +E+I++ + +S    D+F   S +         DS L  + 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 188 M-----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                 C+ + + +  L        +   A D   +M  +G LP   +C   + +L D  
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             + A   + +M+     PNVYT   ++   C  G+++ A+ +F  M   G  P+  TYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+       +  A    NLM +NG  PN++T+N +I G+C  G   +A  + + M   
Sbjct: 395 ALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             S N+VTYNT+I GY   GN+     + + M   G K D  +Y  LI G CK  K + A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++  + L PN  TY+ALI G C  +  + A  L + M RSGCRPN   + +L+  
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  +F  A E+   M+E+ + P+ +  + +  GL   G   LA+++F KM  +G LP
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 169/353 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L          + A   F +M   G  P   + N  ++ L+++ R+  A 
Sbjct: 351 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 410

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M RN  SPN+ T N ++  +C LG  ++A+ V  NM   G   ++ TYNT+I G+
Sbjct: 411 VVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 470

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G  + A++  +LM   G +P+  ++  LI GFCK  K+  A  +F+EM    + PN 
Sbjct: 471 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 530

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+GY +    +   SL E M R+G + ++ TYN LI GL K+     A  L K 
Sbjct: 531 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 590

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + PN  TY+A+I G C   ++  A +++  MI  GC PN   +  L+    Q   
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 650

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A  +  E+    + PD I   ++       GK E A     +M   G  P
Sbjct: 651 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 703



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 194/405 (47%), Gaps = 12/405 (2%)

Query: 161 SILRGILDS----DSFDLPSKL-FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           +++ G+ DS    ++FDL  ++    IL +   C + P++             + +A   
Sbjct: 290 TLINGLCDSGRVNEAFDLIREMILHGILPTAHTC-TGPII------ALCDMGCYEDAWRL 342

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F  M++ G  P + +    +S L  S  + +A+G +  M R+ + PN  T N +++   +
Sbjct: 343 FVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVE 402

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              I+ A  V   M   G  P++ TYN +I G+C  G    AM   N M + G   N++T
Sbjct: 403 NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT+I G+C  G    A RI   M+     P+  +Y  LI G+ ++   E    L+ EM+
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G+  + +TY ALI G CK+ K   A  L++ + ++   PN  TY+ LI G   + N  
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A +L K MI  G  PN   +  ++   C+N     A E+  +M+E+   P+ +  S L 
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             L   GK E A  LF ++E  GL+P     ++ I     +G+ E
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 18/339 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ +++IL +NR+ K +  +L                   L     C  + + ++ + K
Sbjct: 392 TYNALINILVENRRIKYAFVVLN------------------LMGRNGCSPNIVTYNEMIK 433

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      + A      M   G    + + N  +    DS     AL     MR     P
Sbjct: 434 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 493

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + ++   ++  FCK+  +E A  +F  M   G  P+  TY  LI G+C    L  A    
Sbjct: 494 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 553

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+++G +PNV T+N LI G  K+     A  +   M    + PNVVTY  +I+G  + 
Sbjct: 554 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 613

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++ +   ++ +M+  G   ++LTY++LI  L +EGK ++A  L  +L+++ L+P+  TY
Sbjct: 614 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 673

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             +I    +    E AF     MI++GC+P    + +L+
Sbjct: 674 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 712



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D + +M   G  P +   N  +++L     V  A    K++  + +SP+ +T   ++   
Sbjct: 201 DRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGH 260

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+   ++ A++VF  M   G  P+  TY+TLI+G C+ G ++ A      M  +GI P  
Sbjct: 261 CRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTA 320

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T    I   C  G   +A R+F +MK     PNV TY  LI+G    G  ++   L+  
Sbjct: 321 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 380

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R+G+  + +TYNALI  L +  + K A  ++  + +N   PN  TY+ +I G C+  +
Sbjct: 381 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGD 440

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++A  +  +M++ G   N   +  ++  +C + +   A  +L  M +    PD    +E
Sbjct: 441 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 500

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G     K E A  LF +M   GL P
Sbjct: 501 LICGFCKISKMESAFGLFNEMVDDGLCP 528



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 179/440 (40%), Gaps = 61/440 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I++G  DS +     ++ D  L     C      +  L   +    K  +A   F +M 
Sbjct: 465 TIIKGYCDSGNTTSALRILD--LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   +    +      E++D A    + M+R+   PNV T N+++H   K     
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+ K M   G  P+V TY  +I G C  G  SLA++  N M + G  PN++T+++LI
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               ++GK+ EA  +F+E++   + P+ +TY  +I  Y   G  E   +    M++ G +
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702

Query: 401 VDILTYNALILGLCKE---GKTKKAA-----------YLVKDLD---------------- 430
             + TY  LI GL  E      + AA           Y   D D                
Sbjct: 703 PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 762

Query: 431 ----KNSLVPNAST-------------------------YSALITGQCVRKNSERAFQLY 461
               +N+LV N ST                         Y++L+      +N + A  ++
Sbjct: 763 SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 822

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M   GC  + + ++ L+   CQ      A      ML +   PD ++ + L  GL   
Sbjct: 823 KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 882

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  +L M+    ME R  +P
Sbjct: 883 GYKDLCMEFLHIMETRRYMP 902



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 7/312 (2%)

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           +I+SC+         E +   + F   + ++ +   ++  + ++    +LG+    ++ +
Sbjct: 151 LIKSCHS-------KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY 203

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S G  P++  YN +I+  C  G ++ A      + ++ + P+  T+ ++I G C+K
Sbjct: 204 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 263

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             L  A ++F++M      PN VTY+TLING    G       L  EM+ +GI     T 
Sbjct: 264 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 323

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
              I+ LC  G  + A  L  D+      PN  TY+ALI+G CV    + A  L+  M R
Sbjct: 324 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 383

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L++   +N     A  VL  M     +P+ +  +E+  G    G  + 
Sbjct: 384 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKK 443

Query: 527 AMKLFRKMEIRG 538
           AM +   M  RG
Sbjct: 444 AMLVMNNMLQRG 455



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 112/253 (44%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI    +K  ++  M F +++ ++G++  +  ++ L+    + G        +  M +  
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN++ YN +IN   + GN     ++ +++  + +  D  TY ++ILG C++     A 
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + K    PN  TYS LI G C       AF L + MI  G  P  H     +   
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C    ++ A  + ++M  K   P+    + L SGL   G  ++A+ LF +M   G+ P  
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 544 FDKLRTINCAPEN 556
                 IN   EN
Sbjct: 391 VTYNALINILVEN 403



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/368 (19%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           ++T+++++H LTK   F  +E + + +++   F                   + + +  +
Sbjct: 565 VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF------------------PNVVTYTAM 606

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                       A + F +M + G LP + + +  + +L    +V+ A   + E+ R+ +
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 666

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+  T   ++ A+   G +E A      M   G  P++ TY  LI G  N+ LL+    
Sbjct: 667 IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA---- 722

Query: 320 FKNLMEKNGIQPN----------------------------VITFNTLIFGFCKKGKLHE 351
            + L     + PN                            V   N L+      G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN +   M +  + P+   YN+L+    +V N ++   +++ M   G +V +  Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC+  + K+A    +++   +  P+    + LI G       +   +    M      P
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 902

Query: 472 NKHIFEML 479
           + HI+ +L
Sbjct: 903 SFHIYTIL 910



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 62/158 (39%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++  A +    M   G  P  E+ N  L SLL    VD+A+G +K M       ++    
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYK 838

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ A C+L   + A   F+NM    + P       LI G    G   L M+F ++ME  
Sbjct: 839 ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              P+   +  L     KK          +++K    S
Sbjct: 899 RYMPSFHIYTILAREASKKRSWKHVAGCITKVKRATCS 936


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 191/393 (48%), Gaps = 6/393 (1%)

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
           T NR+  S  +I+ G+      D   ++F  +       DS    + +L    A   K  
Sbjct: 147 TPNRR--SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS--WSYGILIDGLAKAGKLN 202

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A   F +M D G  P   + N  +  +  +  +D AL  +K MR     P+ +T N+++
Sbjct: 203 EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILI 262

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            A CK G ++ A  + K M   G +P V TY+TLISG C+   +  A      M K   +
Sbjct: 263 DAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P V+T NTLI G CK G++ EA  +   M ++  SP+VVTYNTL++G+ + G +E    L
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M+  G+  +++TY AL+ GLCK  +  +A  +   +  +   PN  TY+ALI G C 
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 442

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE--KCMAPDS 508
               +   +L+  M+ +G  P+  ++  L +  C++    RA E+L E  E  +  A   
Sbjct: 443 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGD 502

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +      GL   GK E+A+   R M   G LP
Sbjct: 503 EVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 535



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 190/416 (45%), Gaps = 37/416 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  ++SFD   +LF  +  + R C  SP+ ++++      R     A D   +M 
Sbjct: 50  SLIHGLCMANSFDDARELFADM--NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P + + N  +  L  S RV+ AL  + EM R   +PN  + N ++   C+   I+
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167

Query: 281 RAVEVFKNMESM-----------------------------------GFIPSVTTYNTLI 305
           +A +VF  ME+                                    G  PS  TYN +I
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C    L  A++    M   G +P+  TFN LI   CK+GKL EA R+   M      
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VVTY+TLI+G   +   +    L E+M++   K  ++T N LI GLCK G+ K+A  +
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  +  +   P+  TY+ L+ G C    +ERA +L   M+  G  PN   +  L+S  C+
Sbjct: 348 LDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCK 407

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 A  V  +M     AP+    + L  G    G+ +  +KLF +M   G+ P
Sbjct: 408 ANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 167/343 (48%), Gaps = 6/343 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+  + + D   +LF S+    + C  S   F++L   +  R K   A     +M D
Sbjct: 226 VIHGMCLAYTLDEALELFKSM--RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + +  +S L    RVD A    ++M + +  P V T N ++H  CK G I+ 
Sbjct: 284 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 343

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A EV   M S G  P V TYNTL+ GHC  G    A +  + M   G+ PNV+T+  L+ 
Sbjct: 344 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 403

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK  +L EA  +F++MK++  +PN+ TY  LI G+   G  + G  L+ EM+  GI  
Sbjct: 404 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 463

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA---STYSALITGQCVRKNSERAF 458
           D + Y  L   LCK G++ +A  ++++  + SL   A     Y   + G       E A 
Sbjct: 464 DHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMAL 522

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
              + M+R G  P       L++  C++     A  VL E+++
Sbjct: 523 GFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 172/381 (45%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L    A   K  +A + F ++   G  P   +    +  L  +   D A   + +M 
Sbjct: 13  YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P+  T N+++ A CK G++E A ++ K M   G +P V TYNT++ G C    + 
Sbjct: 73  RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   N ME+ G  PN  + NT+I G C++ K+ +A ++F EM+A ++ P+  +Y  LI
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL---------------------- 413
           +G  + G       L++ ML +GI    +TYN +I G+                      
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252

Query: 414 -------------CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
                        CK GK  +A  L+K +  +  VP+  TYS LI+G C     + A  L
Sbjct: 253 PSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHL 312

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M++  C+P       L+   C+      A EVL  M+    +PD +  + L  G   
Sbjct: 313 LEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCR 372

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+ E A +L   M  RGL P
Sbjct: 373 AGQTERARELLSDMVARGLAP 393



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 144/323 (44%), Gaps = 35/323 (10%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +SP+ ++  +++    K G +  A  +F+ +   G  PS   Y +LI G C    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A +    M + G  P+ +T+N +I   CK+G L EA  +  +M      P+VVTYNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL-----VKD 428
           +++G  +    E    L+ EM R G   +  ++N +ILGLC++ K  +A  +      KD
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 429 LDKNS------------------------------LVPNASTYSALITGQCVRKNSERAF 458
           +  +S                              + P+A TY+ +I G C+    + A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L+KSM   GCRP++  F +L+   C+    D A  +L  M +    PD +  S L SGL
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGL 300

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + + A  L   M  R   P
Sbjct: 301 CSIARVDDARHLLEDMVKRQCKP 323



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 125/252 (49%), Gaps = 6/252 (2%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKGKLHEA 352
           P   +Y  LI G    G L+ A   +NL +K   +G+ P+ + + +LI G C      +A
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDA---RNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F++M      P+ VTYN +I+   + G  E    L ++M+ +G   D++TYN ++ G
Sbjct: 65  RELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK  + ++A  L  ++++    PN  +++ +I G C +   ++A Q++  M      P+
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +L+    +    + A ++   ML+  + P ++  + +  G+      + A++LF+
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 533 KMEIRGLLPKGF 544
            M  +G  P  F
Sbjct: 245 SMRSKGCRPSRF 256



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/260 (18%), Positives = 93/260 (35%), Gaps = 59/260 (22%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVF 196
           T+ T + ++H L K  + K +  +L  ++ S                      SP  + +
Sbjct: 324 TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ--------------------SPDVVTY 363

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L   +    +   A +    M   G  P + +    +S L  + R+  A G + +M+ 
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL--- 313
           +  +PN++T   ++  FC  G ++  +++F  M   G  P    Y TL +  C  G    
Sbjct: 424 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 483

Query: 314 ----------------------------------LSLAMKFKNLMEKNGIQPNVITFNTL 339
                                             + +A+ F   M + G  P      +L
Sbjct: 484 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASL 543

Query: 340 IFGFCKKGKLHEANRIFSEM 359
           + G CK G+  EA  +  E+
Sbjct: 544 VAGLCKSGQGGEARAVLEEI 563


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 112/334 (33%), Positives = 178/334 (53%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A D F +M     LP +   ++F S +  +++ ++ L F K+M  N I+ N+YTLN
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+      A  V   +  +G+ P  TT+NTLI+G C +  +S A+     M +N
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G QPNV+T+N+++ G CK G    A  +  +M   NV  +V TY+T+I+   + G  +  
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            SL++EM   GIK  ++TYN+L+ GLCK GK      L+KD+    ++PN  T++ LI  
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                  + A +LYK MI  G  PN   +  LM  +C       A  +L  M+    +PD
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + L  G     + +  MKLFRK+  RGL+ 
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 176/346 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L        K   A     +M + G  P + + N  ++ +  S    +AL   ++M 
Sbjct: 138 FNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMD 197

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  +V+T + ++ + C+ G I+ A+ +FK ME+ G   S+ TYN+L+ G C  G  +
Sbjct: 198 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWN 257

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             ++    M    I PNVITFN LI  F K+GKL EAN ++ EM    +SPN +TYN+L+
Sbjct: 258 DGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLM 317

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY          ++ + M+RN    DI+T+ +LI G CK  +  +   L + + K  LV
Sbjct: 318 DGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLV 377

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            N  TYS L+ G C     E A +L++ M+  G  P+   + +L+   C N   ++A E+
Sbjct: 378 ANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI 437

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++ +  M  D ++ + +  G+   GK E A  LF  +  +G+ P
Sbjct: 438 FEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKP 483



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  ++ L    +V  A+     M  N   PNV T N +++  CK G    A
Sbjct: 130 GYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLA 189

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++ + M+       V TY+T+I   C  G +  A+     ME  GI+ +++T+N+L+ G
Sbjct: 190 LDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGG 249

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK GK ++  ++  +M +  + PNV+T+N LI+ + + G  +    LY+EM+  GI  +
Sbjct: 250 LCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPN 309

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            +TYN+L+ G C + +  +A  ++  + +N+  P+  T+++LI G C  K  +   +L++
Sbjct: 310 TITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFR 369

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            + + G   N   + +L+  FCQ+   + A E+  EM+   + PD +    L  GL   G
Sbjct: 370 KISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNG 429

Query: 523 KDELAMKLFRKME 535
           K E A+++F  ++
Sbjct: 430 KLEKALEIFEDLQ 442



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 182/378 (48%), Gaps = 2/378 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ GI  S    L   L   +    R   +    +  +  +         A   F +M 
Sbjct: 175 SIVNGICKSGDTSLALDLLRKM--DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 232

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G    + + N  +  L  + + +  +   K+M   +I PNV T N+++  F K G ++
Sbjct: 233 TKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQ 292

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E++K M + G  P+  TYN+L+ G+C +  LS A    +LM +N   P+++TF +LI
Sbjct: 293 EANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLI 352

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+CK  ++ E  ++F ++    +  N VTY+ L+ G+ Q G  E+   L++EM+  G+ 
Sbjct: 353 KGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVL 412

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TY  L+ GLC  GK +KA  + +DL K+ +  +   Y+ +I G C     E A+ L
Sbjct: 413 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNL 472

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           + S+   G +PN   + +++S  C+      A  +L +M E    P+    + L      
Sbjct: 473 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLR 532

Query: 521 CGKDELAMKLFRKMEIRG 538
            G    + KL  +M+  G
Sbjct: 533 DGDLTASAKLIEEMKSCG 550



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 125/252 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y  + +   A +    M      P I +    +      +RVD  +  +++
Sbjct: 311 ITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK 370

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +  +  N  T ++++  FC+ G +E A E+F+ M S+G +P V TY  L+ G C+ G 
Sbjct: 371 ISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGK 430

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++    ++K+ +  +++ +  +I G CK GK+ +A  +F  +    V PNV+TY  
Sbjct: 431 LEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 490

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G+      L  +M  +G + +  TYN LI    ++G    +A L++++    
Sbjct: 491 MISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550

Query: 434 LVPNASTYSALI 445
              +AS+   +I
Sbjct: 551 FSADASSIKMVI 562



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 101/214 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F  L K Y   K+       F ++   G +    + +  +     S +++IA 
Sbjct: 341 CSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAE 400

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++EM    + P+V T  +++   C  G +E+A+E+F++++       +  Y  +I G 
Sbjct: 401 ELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGM 460

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A      +   G++PNV+T+  +I G CKKG L EAN +  +M+     PN 
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            TYNTLI  + + G+    A L EEM   G   D
Sbjct: 521 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 554



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 111/216 (51%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+++G       D   KLF  I  S R   ++ + + +L + +    K   A + F +M 
Sbjct: 350 SLIKGYCKVKRVDEGMKLFRKI--SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + +    L  L D+ +++ AL  ++++++++++ ++    +++   CK G +E
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F ++   G  P+V TY  +ISG C KG LS A      ME++G +PN  T+NTLI
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G L  + ++  EMK+   S +  +   +I+
Sbjct: 528 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 563


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/427 (30%), Positives = 209/427 (48%), Gaps = 42/427 (9%)

Query: 175 PSKLFDSILYSYRMCDSSP-LVFDLLFKTYAH-RKKFRNATDTFCQMRDYGFLPIIESCN 232
           P  L    L + R+  SSP   FD L K+YA    +   A       R  G++P + + N
Sbjct: 101 PLPLLVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYN 160

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             L +L D+     A  F+  M  + ++PNVYT N+++ A C  G  + A+ + ++M   
Sbjct: 161 AVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA 219

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P+V TYNTL++     G +  A +   +M + G++PN++TFN+++ G CK GK+ +A
Sbjct: 220 GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDA 279

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++F EM    ++P+ V+YNTL+ GY + G S    S++ EM + GI  D++T+ +LI  
Sbjct: 280 RKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 339

Query: 413 LCKEGKTKKAAYLVKDLDKNSLV-----------------------------------PN 437
           +CK G  ++A  LV+ + +  L                                    P+
Sbjct: 340 MCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPS 399

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
              Y+ALI G C+    + A +L   M   G +P+   +  ++S +C+N D   A E+  
Sbjct: 400 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 459

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           +MLEK + PD+I  S L   L  CG+  L  A  LF+ M   GL P  F     I+   +
Sbjct: 460 QMLEKGVLPDAITYSSLIRVL--CGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCK 517

Query: 556 NGEKESG 562
            G  ES 
Sbjct: 518 EGNVESA 524



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 176/356 (49%), Gaps = 2/356 (0%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           SIL   R     P  + ++ L   +    +   A      MR+ G  P + + N  ++ +
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             + +++ A   + EM R  ++P+  + N ++  +CK G    A+ VF  M   G +P V
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            T+ +LI   C  G L  A+     M + G+Q N +TF  LI GFCKKG L +A      
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           MK   + P+VV YN LINGY  VG  +    L  EM   G+K D++TY+ +I   CK   
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           T  A  L + + +  ++P+A TYS+LI   C  K    A  L+K+MI+ G +P++  +  
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L+   C+  + + A  +  +M++  + PD +  S L +GL    +   A +L  K+
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 566



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 15/353 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        K  +A   F +M   G  P   S N  +     +     AL  + E
Sbjct: 261 VTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 320

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+V T   ++H  CK G +ERAV + + M   G   +  T+  LI G C KG 
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M++  I+P+V+ +N LI G+C  G++ EA  +  EM+A  + P+VVTY+T
Sbjct: 381 LDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+ Y +  ++     L ++ML  G+  D +TY++LI  LC E +   A  L K++ K  
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY++LI G C   N E A  L+  M+++G  P+   + +L++   ++     A 
Sbjct: 501 LQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 560

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP--KGF 544
           ++L ++  +    D I  +  Y  L HC          RK E++ +L   KGF
Sbjct: 561 QLLFKLYHE----DPIPANTKYDALMHC---------CRKAELKSVLALLKGF 600



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 163/375 (43%), Gaps = 59/375 (15%)

Query: 218 QMRDYGFLPIIES-CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           QM +  F  +I+  C K          +D AL   + M++ RI P+V   N +++ +C +
Sbjct: 362 QMNEVTFTALIDGFCKKGF--------LDDALLAVRGMKQCRIKPSVVCYNALINGYCMV 413

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A E+   ME+ G  P V TY+T+IS +C       A +    M + G+ P+ IT+
Sbjct: 414 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 473

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++LI   C + +L +A+ +F  M    + P+  TY +LI+G+ + GN E   SL+++M++
Sbjct: 474 SSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVK 533

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP-------------------- 436
            G+  D++TY+ LI GL K  +  +A  L+  L     +P                    
Sbjct: 534 AGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSV 593

Query: 437 ------------------------------NASTYSALITGQCVRKNSERAFQLYKSMIR 466
                                         + S YS LI G C   N  +A   +K M++
Sbjct: 594 LALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 653

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN      L+    +N     A +V+ ++L  C   D+     L     + G  + 
Sbjct: 654 GGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDA 713

Query: 527 AMKLFRKMEIRGLLP 541
            + +   M   GLLP
Sbjct: 714 VLDVLHGMAKDGLLP 728



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/398 (20%), Positives = 158/398 (39%), Gaps = 67/398 (16%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILY--SY 186
           T + ++H++ K    + + +++R + +              D F     L D++L     
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 187 RMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           + C   P V  ++ L   Y    +   A +   +M   G  P + + +  +S+   +   
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A    ++M    + P+  T + ++   C    +  A  +FKNM  +G  P   TY +L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG---------------------- 342
           I GHC +G +  A+   + M K G+ P+V+T++ LI G                      
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 343 ----------------------------FCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
                                       FC KG ++EA++++  M   N + +   Y+ L
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + GN     S +++ML+ G   +  +  +LI GL + G   +A  +++ L     
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCS 691

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           + +A    ALI       N +    +   M + G  P+
Sbjct: 692 LADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 114/376 (30%), Positives = 194/376 (51%), Gaps = 4/376 (1%)

Query: 167 LDSDSFDLPSKLFDSILYSYRMCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           L+ ++ D    LF+ +L   RM     +V F  L  +    K +      + QM  +G  
Sbjct: 30  LNVNTIDDALSLFNRML---RMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIP 86

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
               + N  ++S     R+  A     ++ +    P+  T   ++   C  G I  A+++
Sbjct: 87  HNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQL 146

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   GF P V TY TLI+G C  G  S A++F   ME+   +P V+ ++T+I   CK
Sbjct: 147 FDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCK 206

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             +L EA  +FS+M A  +SPN  TY++LI+G   +G+ +    L+  M+   I  D LT
Sbjct: 207 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 266

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N L+  LCKEG   KA Y+V  + ++ L P+  TY++L+ G C+R    +   ++ +M+
Sbjct: 267 FNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           R GC P+   +  L++ +C+ +  D+A  +  EM ++ + PD++  + L  GL H G+  
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ LF +M + G +P
Sbjct: 387 DAIALFHEMVVYGQIP 402



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 160/318 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   +  + SL    ++  AL  + +M    ISPN +T + ++H  C LG  + A+ +
Sbjct: 192 PTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRL 251

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M     +P   T+NTL+   C +G++  A    ++M ++ ++P+V+T+N+L+ G C 
Sbjct: 252 FYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCL 311

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ +   +F  M      P+V++Y TLINGY ++   +    L+EEM + G+  D +T
Sbjct: 312 RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLC  G+ + A  L  ++     +P+  TY  L    C       A  L K + 
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            +   P+ HI+ ++M   C+  + + A ++  ++  K + PD    + + +GL   G   
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 491

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A KLF +M+  G  P  
Sbjct: 492 EASKLFGEMDENGCSPNA 509



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 172/353 (48%), Gaps = 6/353 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   F  L +      K   A   F +M   GF P + +    ++ L        A+ F 
Sbjct: 123 STATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFL 182

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + M +    P V   + ++ + CK   +  A+ +F +M + G  P+  TY++LI G C  
Sbjct: 183 RSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCIL 242

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A++    M    I P+ +TFNTL+   CK+G + +A+ +   M  +++ P+VVTY
Sbjct: 243 GHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTY 302

Query: 372 NTLINGYGQVGNSEMG--ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           N+L++G+     SEMG   ++++ M+R G    +++Y  LI G CK     KA  L +++
Sbjct: 303 NSLMDGHCL--RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEM 360

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  L+P+  TY+ LI G C       A  L+  M+  G  P+   + +L    C+N   
Sbjct: 361 SQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRL 420

Query: 490 DRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A  VLL+++E   + PD  I S +  G+   G+ E A  LF K+  +GL P
Sbjct: 421 AEAM-VLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHP 472



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 172/360 (47%), Gaps = 16/360 (4%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLDSERVD 245
           R C  + +V+  +  +    ++   A   F  M   G  P     N F  SSL+    + 
Sbjct: 188 RNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISP-----NNFTYSSLIHGLCI- 241

Query: 246 IALGFYKE-------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             LG +KE       M   +I P+  T N ++ A CK G++ +A  V   M      P V
Sbjct: 242 --LGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDV 299

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN+L+ GHC +  +   +   + M + G  P+VI++ TLI G+CK   + +A  +F E
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    + P+ VTYNTLI+G   VG      +L+ EM+  G   D++TY  L   LCK  +
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  L+K ++  +L P+   YS ++ G C     E A  L+  +   G  P+   + +
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +++  CQ      A+++  EM E   +P++   + +  G     +   A++LF++M  RG
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 121/252 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +  R +     + F  M   G +P + S    ++     + +D A+G ++E
Sbjct: 300 VTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEE 359

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+  T N ++H  C +G +  A+ +F  M   G IP + TY  L    C    
Sbjct: 360 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 419

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ AM    ++E   + P++  ++ ++ G C+ G+L  A  +FS++ +  + P+V TY  
Sbjct: 420 LAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTI 479

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  Q G     + L+ EM  NG   +  TYN +  G  +  +T +A  L +++    
Sbjct: 480 MINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539

Query: 434 LVPNASTYSALI 445
              + ST + L+
Sbjct: 540 FSIDVSTTTLLV 551



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 145/339 (42%), Gaps = 13/339 (3%)

Query: 83  NIAYSHLIHSDWKKLTALSTHLTPFRVKHVLL--KVQKDYVLSLEFFTWVQTHKPSSLTL 140
           N  YS LIH     L  L       R+ + ++  K+  D    L F T V       + +
Sbjct: 229 NFTYSSLIHG----LCILGHWKEAIRLFYAMIHRKIMPD---QLTFNTLVDALCKEGMVV 281

Query: 141 ETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           + H +V  ++  + K    +  S++ G            +FD+++   + C  S + +  
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVR--KGCVPSVISYTT 339

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y   +    A   F +M   G +P   + N  +  L    R+  A+  + EM    
Sbjct: 340 LINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYG 399

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++ T  ++    CK   +  A+ + K +E     P +  Y+ ++ G C  G L  A 
Sbjct: 400 QIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAAR 459

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + +   G+ P+V T+  +I G C++G L EA+++F EM     SPN  TYN +  G+
Sbjct: 460 DLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGF 519

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            +   +     L++EML  G  +D+ T   L+  L  +G
Sbjct: 520 LRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 225/494 (45%), Gaps = 39/494 (7%)

Query: 77  QDLDFVNIAYSHLIH---SDWKKLTALS---THLTPFRVKHVLLKVQKDYV---LSLEFF 127
           +D D V    + L+     DWK   A S   + L+P  V  ++   +   +   L L+FF
Sbjct: 44  EDPDAVAAEVATLLSRCAGDWKLAIAASDIPSRLSPDAVSSLIFGGRSHSLHPKLLLDFF 103

Query: 128 TWVQTH--KPSS-------LTLETHSI------VLH--ILTKNRKFKSSESILRGILDSD 170
            W +     PS+        +L   S+      +LH  IL          SI R I D+D
Sbjct: 104 YWSRPRIAPPSADAFARLAASLCAASLFPQANGLLHQMILAHPHPPLVLASIQRAIQDTD 163

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
                        +  R    S  V D+L  TY      RNA      M D G  P    
Sbjct: 164 -------------HRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRC 210

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  L  LL ++ +++       M    I P+VYT +  + A CK    + A +VF+ M 
Sbjct: 211 CNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMR 270

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
                 +  TYN +ISG C  G +  A  FK  M   G+ P+  T+  L+ G CK  +L 
Sbjct: 271 RRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLK 330

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA  +  EM  + + PN+V Y TL++G+ + G +     + +EM+  G++ + + Y+ LI
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLI 390

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK G+  +A+ L+K++ K  L P+  TY+ L+ G   + + + AF+L   M  SG  
Sbjct: 391 RGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL 450

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN + + ++++  CQN +   A  +L EM+ + + P++ + + L  G    G   LA + 
Sbjct: 451 PNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEA 510

Query: 531 FRKMEIRGLLPKGF 544
             KM    + P  F
Sbjct: 511 LEKMTKANVHPDLF 524



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 158/334 (47%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A     +M   G  P I      +   +   +   A    KEM    + PN    +
Sbjct: 328 RLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYD 387

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK+G + RA ++ K M  +G  P   TYN L+ GH  +     A +  N M  +
Sbjct: 388 NLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNS 447

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI PNV ++  +I G C+ G+  EA  +  EM +  + PN   Y  LI G+ + GN  + 
Sbjct: 448 GILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLA 507

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
               E+M +  +  D+  YN+LI GL   G+ ++A      + K  LVP+  TYS LI G
Sbjct: 508 CEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHG 567

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C   N E+A QL + M+ SG +PN   +  L+  + ++ D+++ + +L  ML     PD
Sbjct: 568 YCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + I   +   L      E+A  +  ++E  GL+P
Sbjct: 628 NHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 154/311 (49%), Gaps = 1/311 (0%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R    SP+   L++++  + K G +  A +V   M  +G  P+    N L+        +
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAM 224

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L  K K  ME  GI P+V T++T I   CK      A ++F EM+  + + N VTYN +
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  + G  E      EEM+  G+  D  TY AL+ GLCK  + K+A  L+ ++  + L
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN   Y  L+ G      +  AF + K MI +G +PNK +++ L+   C+     RA++
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           +L EM++  + PD+   + L  G       + A +L  +M   G+LP  +     IN   
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLC 464

Query: 555 ENGE-KESGGL 564
           +NGE KE+G L
Sbjct: 465 QNGESKEAGNL 475



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 164/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+  L   +    K   A D   +M   G  P     +  +  L    ++  A    KE
Sbjct: 349 VVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKE 408

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+ +T N +M    +    + A E+   M + G +P+V +Y  +I+G C  G 
Sbjct: 409 MIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGE 468

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A      M   G++PN   +  LI G  K+G +  A     +M   NV P++  YN+
Sbjct: 469 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNS 528

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G   VG  E     Y ++ + G+  D  TY+ LI G CK G  +KA  L++ +  + 
Sbjct: 529 LIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG 588

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PNA TY+ L+ G     + E+   + +SM+ SG +P+ HI+ +++    ++E+ + A 
Sbjct: 589 LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            VL E+ +  + PD  I S L SGL      E A+ L  +M   GL P
Sbjct: 649 MVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEP 696



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 181/385 (47%), Gaps = 2/385 (0%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++++RG+         SKL   ++      D+    ++ L + +  +     A +   +M
Sbjct: 387 DNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT--FTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R+ G LP + S    ++ L  +     A    +EM    + PN +    ++    K G I
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E  + M      P +  YN+LI G    G +  A ++   ++K G+ P+  T++ L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+CK G L +A+++  +M  + + PN  TY  L+ GY +  + E  +S+ + ML +G 
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K D   Y  +I  L +    + A  ++ +++KN LVP+   YS+LI+G C   + E+A  
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M + G  P    +  L+  FC++ D  RA  V   +L K + P+ +  + L  G  
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G    A  L+++M  RG+ P  F
Sbjct: 745 KNGDITDAFDLYKEMLDRGIAPDAF 769



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 151/310 (48%), Gaps = 1/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  L    R++ A  +Y ++++  + P+ +T + ++H +CK G +E+A ++ + M +
Sbjct: 527 NSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLN 586

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TY  L+ G+               M  +G +P+   +  +I    +   +  
Sbjct: 587 SGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 646

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  + +E++   + P++  Y++LI+G  ++ + E    L +EM + G++  I+ YNALI 
Sbjct: 647 AFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALID 706

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G C+ G   +A  +   +    LVPN  TY+ALI G C   +   AF LYK M+  G  P
Sbjct: 707 GFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAP 766

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +  ++ +L +      D ++A  +  EM  +  A  S + + L  G    GK +   KL 
Sbjct: 767 DAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVS-LFNTLVHGFCKRGKLQETEKLL 825

Query: 532 RKMEIRGLLP 541
             M  R ++P
Sbjct: 826 HVMMDREIVP 835



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 131/304 (43%), Gaps = 1/304 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y        A     QM + G  P  ++    L     S   +      + M  + 
Sbjct: 564 LIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSG 623

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+ +   +V+    +   +E A  V   +E  G +P +  Y++LISG C    +  A+
Sbjct: 624 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAV 683

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M K G++P ++ +N LI GFC+ G +  A  +F  + A  + PN VTY  LI+G 
Sbjct: 684 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGN 743

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+      LY+EML  GI  D   YN L  G       ++A +L +++  N    N 
Sbjct: 744 CKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYANV 802

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S ++ L+ G C R   +   +L   M+     PN    E ++S F +      A  V  E
Sbjct: 803 SLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAE 862

Query: 499 MLEK 502
           + +K
Sbjct: 863 LQQK 866



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 108/255 (42%), Gaps = 36/255 (14%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L G   S+ ++  S +  S+L S    D+   ++ ++ +  +  +    A     ++  
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNH--IYGIVIRNLSRSENMEVAFMVLTEVEK 656

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P +   +  +S L     ++ A+G   EM +  + P +   N ++  FC+ G I R
Sbjct: 657 NGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISR 716

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP---------- 331
           A  VF ++ + G +P+  TY  LI G+C  G ++ A      M   GI P          
Sbjct: 717 ARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLAT 776

Query: 332 ------------------------NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                                   NV  FNTL+ GFCK+GKL E  ++   M    + PN
Sbjct: 777 GCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPN 836

Query: 368 VVTYNTLINGYGQVG 382
             T   +++ +G+ G
Sbjct: 837 AQTVEKVVSEFGKAG 851


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 227/510 (44%), Gaps = 43/510 (8%)

Query: 89  LIHSDWKKLTALSTH---LTPFRVKHVLLKVQKDYVLSLE-FFTWVQTHKPSSLTLETHS 144
           L   DW+ L     +   L P  V  VL K + D  + L+ FF W  +   +   L ++S
Sbjct: 65  LKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFHWSSSKMSTPQYLHSYS 124

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-VFDLLFKTY 203
           I+   L  +     ++++L  +L +     P ++ DS++  YR    S L VFD+    +
Sbjct: 125 ILAIRLCNSGLIHQADNMLEKLLQTRK--PPLEILDSLVRCYREFGGSNLTVFDIFIDKF 182

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
                   A+  F      GF P +  CN  +  LL +  + +    Y  M   +I P+V
Sbjct: 183 RVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDV 242

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           YT   V+ A CK+G + +   V   ME     P++ TYN  I G C  G +  A++ K L
Sbjct: 243 YTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN---------------- 367
           M + G+ P+  T+  L+ GFCK+ +  EA  IF  M ++ ++PN                
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 368 -------------------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
                              VVTYN +I G  + G      SL+ EML  GI+ D  TYN 
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNL 421

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G  K     KA  L+ ++    L P+  TYS LI+G C   + ++A ++   MIR+G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +PN  ++  L+  + Q   ++ A E+L  M+   + PD    + L  GL    K E A 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 529 KLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            L   M  +G+ P        IN   ++GE
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 159/349 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + LL   +  +K+ + A   F  M   G  P   +    +   +    ++ AL    EM 
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  NV T N ++    K G + +A+ +F  M   G  P   TYN LI G+     ++
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMA 433

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M+   + P+  T++ LI G C    L +AN +  +M    V PNV  Y TLI
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Y Q    EM   L + M+ NG+  D+  YN LI+GLC+  K ++A  L+ D+ +  + 
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIK 553

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PNA TY A I         + A + +K M+ SG  PN  I+ +L+   C   +   A   
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              MLEK + PD    S +   L   GK + AM +F K    G++P  F
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +    A   +   A   F +M   G  P   + N  +   L S  +  A     E
Sbjct: 382 VTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAE 441

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+  +++P+ +T ++++   C    +++A EV   M   G  P+V  Y TLI  +  +  
Sbjct: 442 MKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESR 501

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             +A++   +M  NG+ P++  +N LI G C+  K+ EA  +  +M    + PN  TY  
Sbjct: 502 YEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA 561

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            IN Y + G  ++    +++ML +GI  + + Y  LI G C  G T +A    K + +  
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+   YSA+I        ++ A  ++   +++G  P+  ++  L+S FC+  D ++A+
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTIN 551
           ++  EML   + P+ ++ + L +   +C    L  A KLF +M  +G+ P G+     I 
Sbjct: 682 QLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGY-----IY 736

Query: 552 CAPENGEKESGGL 564
           C   +G  + G L
Sbjct: 737 CILIDGCGKEGNL 749



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 36/384 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L K +        A  TF  M + G +P I + +  + SL  + +   A+G + +
Sbjct: 592 VIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLK 651

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS--GHCNK 311
             +  + P+V+  N ++  FCK G IE+A +++  M   G  P++  YNTLI+  G+C  
Sbjct: 652 FLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKS 711

Query: 312 GLLSLAMKFKNLMEKNGIQPN----------------------------------VITFN 337
           G L+ A K  + M   GI P+                                  +  FN
Sbjct: 712 GNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFN 771

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI  FCK GK+ EA  +F +M    ++PN+VTY  LI+ YG+    E    L+ +M   
Sbjct: 772 SLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETR 831

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  + LTY +L+L   + G   K   L KD++   +  +A  Y  + +  C    S  A
Sbjct: 832 NIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEA 891

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L    +  G +    +F+ L+   C+ +      E+L EM ++ ++  S   + L  G
Sbjct: 892 LKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLG 951

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
            +  G ++ A K+   M+  G +P
Sbjct: 952 FYKSGNEDEASKVLGVMQRLGWVP 975



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 167/386 (43%), Gaps = 36/386 (9%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  + +L     H    + A +   QM   G  P +      + + +   R ++A+   
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K M  N + P+++  N ++   C+   +E A  +  +M   G  P+  TY   I+ +   
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G + +A ++   M  +GI PN + +  LI G C  G   EA   F  M    + P++  Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + +I+   + G ++    ++ + L+ G+  D+  YN+LI G CKEG  +KA+ L  ++  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 432 NSLVPNASTYSALIT--GQCVRKNSERAFQLYKSMIRSGCRPNKHI-------------- 475
           N + PN   Y+ LI   G C   N   AF+L+  MI  G  P+ +I              
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749

Query: 476 --------------------FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
                               F  L+ +FC++     A E+  +M++K + P+ +  + L 
Sbjct: 750 EKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILI 809

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
                    E A +LF  ME R ++P
Sbjct: 810 DAYGKAEMMEEAEQLFLDMETRNIIP 835



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/368 (23%), Positives = 154/368 (41%), Gaps = 40/368 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            +  +  + +   K + A   F +    G +P +   N  +S       ++ A   Y EM
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 255 RRNRISPNVYTLNMVM--HAFCKLGIIERAVEVFKNMESMGFIP---------------- 296
             N I+PN+   N ++  + +CK G +  A ++F  M S G  P                
Sbjct: 688 LHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 747

Query: 297 ------------------SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                             S++ +N+LI   C  G +  A +  + M    + PN++T+  
Sbjct: 748 NLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTI 807

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI  + K   + EA ++F +M+  N+ PN +TY +L+  Y Q+GN     SL+++M   G
Sbjct: 808 LIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARG 867

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  D + Y  +    CKEGK+ +A  L+       +      + ALI   C  K      
Sbjct: 868 IACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVL 927

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L   M +     +      L+  F ++ + D A++VL  M      P S+ L++  S  
Sbjct: 928 ELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSIS-- 985

Query: 519 HHCGKDEL 526
              G+D++
Sbjct: 986 --TGRDDM 991


>gi|225428586|ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 212/455 (46%), Gaps = 28/455 (6%)

Query: 81  FVNIAYSHLIH----SDWKKLTAL-STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKP 135
            ++ A S L H    S W  L +L     TP     ++L+++ +  L+L FF W      
Sbjct: 36  LISTAVSILRHQRSKSRWSHLQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLWCHHKSL 95

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFD-LPSKLFDSILYSYRMCD 190
            + TL ++S ++HIL + R    +  ++R  +    DSD     P K+F+S++ +Y  C 
Sbjct: 96  CNHTLLSYSTIIHILARARLKSQALGLIRTAIRVFDDSDECSSQPPKIFESLVKTYNSCG 155

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+P VFDLL K   + K+   +      +R  G  P I +CN  +  +      D     
Sbjct: 156 SAPFVFDLLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYEI 215

Query: 251 YKEM-----------------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
           Y+E+                  R R+ PNV+T N +M  F + G +E+  E++  M    
Sbjct: 216 YREVFGSWDDEINEKVRVRVRVRVRVCPNVHTFNALMVCFYRDGGVEKVEEIWAEMGEWD 275

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+  +Y+ L++  C++G +    K    M    ++ +++ +NT+I GFC+ G++    
Sbjct: 276 CNPNAYSYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHDIMAYNTIIGGFCRIGEIERGE 335

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F EM+ + +    VTY  LINGY ++G+ +    LY++M R G + +  T + +IL L
Sbjct: 336 ELFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVLLYKDMCRKGFRAEARTVDGMILLL 395

Query: 414 CKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           C   +  +A  L++    N    P   +Y  LI G C     E A +L   M+  G +P 
Sbjct: 396 CNNRRVHEALKLLRVAMGNVEFAPRGKSYETLIKGFCEEGKMEEASKLQSEMVGKGFKPT 455

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
             I+   +  + +  + + A  +  EM E  M  +
Sbjct: 456 LEIYSAFIDGYMKQGNKEIAETLRKEMFETQMQQE 490



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 65/297 (21%), Positives = 114/297 (38%), Gaps = 53/297 (17%)

Query: 276 LGIIERAVEVFKNMESMGFIPS------VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           LG+I  A+ VF + +     P       V TYN+                        G 
Sbjct: 120 LGLIRTAIRVFDDSDECSSQPPKIFESLVKTYNSC-----------------------GS 156

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P V  F+ LI       ++ ++  I   +++  +SP + T N LI    +    + G  
Sbjct: 157 APFV--FDLLIKACLNSKRIEQSISIVKMLRSRGISPTISTCNALIWQVSRGRGCDAGYE 214

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y E                + G   +   +K    V+   +  + PN  T++AL+   C
Sbjct: 215 IYRE----------------VFGSWDDEINEKVRVRVRV--RVRVCPNVHTFNALMV--C 254

Query: 450 VRKNS--ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
             ++   E+  +++  M    C PN + + +LM+ FC         ++  EM  K M  D
Sbjct: 255 FYRDGGVEKVEEIWAEMGEWDCNPNAYSYSVLMAAFCDEGRMGEVEKLWEEMRMKKMEHD 314

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
            +  + +  G    G+ E   +LFR+ME+ G+          IN   E G+ +S  L
Sbjct: 315 IMAYNTIIGGFCRIGEIERGEELFREMELSGIQSTCVTYEHLINGYCEIGDVDSAVL 371


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/518 (26%), Positives = 231/518 (44%), Gaps = 73/518 (14%)

Query: 98  TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFK 157
            ++S+ L P  V+ VL+    D  L+L FF ++  HK  + +  +++I++H L  +R F 
Sbjct: 61  ASISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFW 120

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTF 216
            + S+L  +L  +S   P  +F   L SY+ C  SS L F+LL + Y    +  +A    
Sbjct: 121 PANSLLHTLLLRESH--PKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIV 178

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M     LP + + +  L+ LL   +       + E     + P+ YT + V+ + C+L
Sbjct: 179 KLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCEL 238

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
               RA E  + ME+ GF  S+ TYN LI G C    +S A++ K  +   G+  +V+T+
Sbjct: 239 KDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTY 298

Query: 337 NTLIFGFC-----------------------------------KKGKLHEANRIFSEMKA 361
            TL+ GFC                                   K+GK+ +A  +  ++  
Sbjct: 299 CTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGR 358

Query: 362 TNVSPNVVTYNTLIN-----------------------------------GYGQVGNSEM 386
               PN+  YN LIN                                    + + G  ++
Sbjct: 359 FGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDV 418

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             S ++ M+++GI   +  YN+LI G CK G    A  L  ++    + P A+T+++LI+
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLIS 478

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     ++AF+LY  MI +G  PN + F  L+S  C       A+E+  E++E+ + P
Sbjct: 479 GYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKP 538

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +  + L  G    GK + A +L   M  +GL+P  +
Sbjct: 539 TEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTY 576



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 168/364 (46%), Gaps = 41/364 (11%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + S   S R+D+A+ ++  M ++ I   VY  N +++  CK G +  A  +F  M + G
Sbjct: 406 LIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKG 465

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+ TT+ +LISG+C    +  A K  N M  NGI PNV TF  LI G C   K+ EA+
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F E+    + P  VTYN LI GY + G  +    L E+M + G+  D  TY  LI GL
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC------------------------ 449
           C  G+  KA   + DL K ++  N   YSAL+ G C                        
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645

Query: 450 ---------VRKNSERA--FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL-L 497
                      K  +R   F L K M   G RP+  I+  ++ T+ +   F +A E   L
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + E+C  P+ +  + L +GL   G+ + A  LF++M+   + P       T  C  +N 
Sbjct: 706 MVTEECF-PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSI----TYGCFLDNL 760

Query: 558 EKES 561
            KE 
Sbjct: 761 TKEG 764



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 207/446 (46%), Gaps = 28/446 (6%)

Query: 118 KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILR------------- 164
           KD++ + E   W++ +    L++ T+++++H L K  +   +  + R             
Sbjct: 239 KDFLRAKEKIRWMEANG-FDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVT 297

Query: 165 ------GILDSDSFDLPSKLFDSIL---YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
                 G      F+   +L D ++   +S      S LV D L K    + K  +A + 
Sbjct: 298 YCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLV-DGLRK----QGKIDDAYEL 352

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             ++  +GF+P +   N  ++SL     +D A   Y  M    + PN  T ++++ +FC+
Sbjct: 353 VVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCR 412

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++ A+  F  M   G   +V  YN+LI+G C  G LS A      M   G++P   T
Sbjct: 413 SGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATT 472

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F +LI G+CK  ++ +A +++++M    ++PNV T+  LI+G          + L++E++
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
              IK   +TYN LI G C++GK  KA  L++D+ +  LVP+  TY  LI+G C      
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           +A      + +   + N+  +  L+  +CQ      A     EM+++ +  D +  + L 
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            G       +    L + M  +GL P
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRP 678



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/388 (23%), Positives = 178/388 (45%), Gaps = 38/388 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  ++     S+LFD ++   R    + + +++L + Y    K   A +    M 
Sbjct: 510 ALISGLCSTNKMAEASELFDELVE--RKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG--- 277
             G +P   +    +S L  + RV  A  F  ++ +  +  N    + ++H +C+ G   
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627

Query: 278 --------IIERAV------------------------EVFKNMESMGFIPSVTTYNTLI 305
                   +I+R +                        ++ K+M   G  P    Y ++I
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             +  +G    A +  +LM      PNV+T+  L+ G CK G++  A  +F  M+A NV 
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN +TY   ++   + GN +    L+  ML+ G+  + +T+N +I G CK G+  +A  +
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKV 806

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++ +N + P+  TYS LI   C   N   + +L+ +M+  G  P+   + +L+   C 
Sbjct: 807 LSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCV 866

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           N + D+A E+  +ML + + PD+  L +
Sbjct: 867 NGELDKAFELRDDMLRRGIIPDNKYLQK 894



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 165/376 (43%), Gaps = 5/376 (1%)

Query: 170 DSFDLPSKLFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           DSF    +L  +I Y  RM       +   ++ L            A   F +M + G  
Sbjct: 408 DSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVE 467

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P   +    +S      +V  A   Y +M  N I+PNVYT   ++   C    +  A E+
Sbjct: 468 PTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASEL 527

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +      P+  TYN LI G+C  G +  A +    M + G+ P+  T+  LI G C 
Sbjct: 528 FDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCS 587

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G++ +A     ++   NV  N + Y+ L++GY Q G      S   EM++ GI +D++ 
Sbjct: 588 TGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +  LI G  K+   K    L+KD+    L P+   Y+++I       + ++AF+ +  M+
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
              C PN   +  LM+  C+  + DRA  +   M    + P+SI        L   G  +
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ L   M ++GLL 
Sbjct: 768 EAIGLHHAM-LKGLLA 782



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 36/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L   Y    + + A   + +M D G  P + +    +S L  + ++  A   + E+ 
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             +I P   T N+++  +C+ G I++A E+ ++M   G +P   TY  LISG C+ G +S
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA----------------------- 352
            A  F + + K  ++ N + ++ L+ G+C++G+L EA                       
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 353 -------NR-----IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                  +R     +  +M    + P+ V Y ++I+ Y + G+ +     ++ M+     
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF 712

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++TY AL+ GLCK G+  +A  L K +   ++ PN+ TY   +       N + A  L
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGL 772

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           + +M++ G   N     +++  FC+   F  A +VL EM E  + PD +  S L      
Sbjct: 773 HHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCR 831

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G    ++KL+  M  RGL P
Sbjct: 832 SGNVGASVKLWDTMLNRGLEP 852



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/233 (24%), Positives = 108/233 (46%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + + FN L+  +    ++ +A  I   M A N+ P V T + L+NG  +V        L+
Sbjct: 154 STLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELF 213

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +E +  G++ D  T +A++  +C+     +A   ++ ++ N    +  TY+ LI G C  
Sbjct: 214 DESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKG 273

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A ++ +S+   G   +   +  L+  FC+ + F+   +++ EM+E   +P    +
Sbjct: 274 DRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAV 333

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           S L  GL   GK + A +L  K+   G +P  F     IN   + G+ +   L
Sbjct: 334 SGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAEL 386


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/409 (29%), Positives = 202/409 (49%), Gaps = 9/409 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILD----SDSFDLPSKLFDSILYSYRMCDSSPLV 195
           L++ + +    ++   +KS +S    +++    S  F    ++FD +    R+       
Sbjct: 60  LQSETYIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKN-- 117

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYK-- 252
           F L+F+ Y        A + F +M D +     + S N  L+ ++       AL FY+  
Sbjct: 118 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 177

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
              +  ISPNV + N+V+ A CKLG+++RA+EVF+ M      P V TY TL+ G C + 
Sbjct: 178 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 237

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A+   + M+  G  P+ +TFN LI G CKKG +    ++   M      PN VTYN
Sbjct: 238 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 297

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T+ING    G  +   SL + M+ +    + +TY  LI GL K+G++    +L+  L++ 
Sbjct: 298 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 357

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
               N   YS LI+G    + SE A  L+K M+  GC+PN  ++  L+   C+    D A
Sbjct: 358 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 417

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+L EM+ K   P++   S L  G    G  + A++++++M     +P
Sbjct: 418 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 466



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 13/389 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   D  D    L D +      C  S + F++L      +      T     M 
Sbjct: 228 TLMDGLCKEDRIDEAVLLLDEM--QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 285

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  ++ L    ++D A+     M  ++  PN  T   +++   K G   
Sbjct: 286 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSV 345

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             V +  ++E  G   +   Y+TLISG   +     AM     M + G QPN++ ++ LI
Sbjct: 346 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 405

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GKL EA  I  EM     +PN  TY++LI G+ + GNS+    +++EM +N   
Sbjct: 406 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 465

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + + Y+ LI GLC++GK ++A  +   +    L P+   YS++I G C   + E   +L
Sbjct: 466 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 525

Query: 461 YKSMI--RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSEL 514
           +  M+   S  +P+   + +L+   C+      A ++L  ML++   PD    +I L+ L
Sbjct: 526 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 585

Query: 515 YSGLH--HCGK---DELAMKLFRKMEIRG 538
              L+    G+   DEL ++L ++  I G
Sbjct: 586 REKLNPPQDGREFLDELVVRLHKRQRIVG 614



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 60/347 (17%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+      D    L D ++ S   C  + + +  L      + +  +       + 
Sbjct: 298 TIINGLCLKGKLDKAVSLLDRMVAS--KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 355

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G      + +  +S L   E+ + A+G +K+M      PN+   + ++   C+ G ++
Sbjct: 356 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 415

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+   M + G  P+  TY++LI G    G    A++    M KN   PN I ++ LI
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 475

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML----- 395
            G C+ GKL EA  +++ M    + P+VV Y+++I+G    G+ E+G  L+ EML     
Sbjct: 476 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 535

Query: 396 --------------------------------RNGIKVDILTYN---------------- 407
                                             G   D++T N                
Sbjct: 536 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 595

Query: 408 -----ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
                 L++ L K  +   AA +++ + +  L PNAST+  +I   C
Sbjct: 596 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 642



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 119/285 (41%), Gaps = 10/285 (3%)

Query: 285 VFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           +FK+   MG +    +T+ +LI  + N G      +  + M++   +  V      I  F
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKR---ERRVFIEKNFILVF 122

Query: 344 CKKGKLH---EANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML--RN 397
              GK H   +A  +F  M         V ++N+++N   Q G        YE  +  + 
Sbjct: 123 RAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT 182

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  ++L++N +I  +CK G   +A  + +++      P+  TY  L+ G C     + A
Sbjct: 183 NISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEA 242

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M   GC P+   F +L++  C+  D  R  +++  M  K   P+ +  + + +G
Sbjct: 243 VLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIING 302

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           L   GK + A+ L  +M     +P        IN   + G    G
Sbjct: 303 LCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 347


>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
 gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
          Length = 600

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 182/351 (51%), Gaps = 4/351 (1%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P V   L    A   +  +A   F QMR  G  P   +C   L++L  +     A   + 
Sbjct: 114 PRVPSWLVLVLAQSARPHDALRVFDQMRARGLAPDAHACTALLTALARARMTATARRVFD 173

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM R  ++ + +  N ++H   K G   RA  +   M++ G      +YNT+I+ +C KG
Sbjct: 174 EMARAGLAVSTHVYNAMLHVCLKAGDAARAEALVTRMDAAGVPLDRFSYNTVIALYCKKG 233

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +   AM  ++ M+K GI+ + +T+N+LI G CK G++ EA ++F+EM A   +P+ VTY 
Sbjct: 234 MRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYT 293

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TLI+GY + GN E    L  EM   G+   + TYNA++  LC++GK K+   L+ ++D+ 
Sbjct: 294 TLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDER 353

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            +  +  T + LI   C R +   A ++ K M+ SG + N+  ++ L+  FC+ ++ D A
Sbjct: 354 KVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEA 413

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI--RGLLP 541
            E   +M++   +P+  + S L  G   C K+     L    E+  RGL P
Sbjct: 414 KEAFFQMVDAGFSPNYSVFSWLVDGF--CKKNNADAVLLIPDELMKRGLPP 462



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 138/268 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+     M +  I  +  T N ++H  CK G ++ A ++F  M +    P   TY TLI 
Sbjct: 238 AMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLID 297

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G +  A+K +  ME  G+ P V T+N ++   C+ GK+ E N++ +EM    V  
Sbjct: 298 GYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQA 357

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y + G+      + ++M+ +G++++  TY ALI G CK  +  +A    
Sbjct: 358 DHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAF 417

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +      PN S +S L+ G C + N++    +   +++ G  P+K ++  L+   C+ 
Sbjct: 418 FQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRK 477

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSEL 514
              D+A +V  +M  K +  DS++ + L
Sbjct: 478 GLVDQAQKVFDQMQSKGLVGDSLVYATL 505



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 14/335 (4%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  L    RV  A   + EM   + +P+  T   ++  +C+ G IE AV++   ME+
Sbjct: 258 NSLIHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEA 317

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P V TYN ++   C  G +    +  N M++  +Q + +T NTLI  +CK+G +  
Sbjct: 318 TGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTS 377

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++  +M  + +  N  TY  LI+G+ +    +     + +M+  G   +   ++ L+ 
Sbjct: 378 ACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVD 437

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK+        +  +L K  L P+ + Y +LI   C +   ++A +++  M   G   
Sbjct: 438 GFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVG 497

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAM 528
           +  ++  L  T+        A+  L  M +  +     I  ++Y+ L     DE   L +
Sbjct: 498 DSLVYATLAYTYLTEGKPVAASNTLDGMAKNQL----YITPQIYNCLCTSYADEKETLNI 553

Query: 529 KLFRKMEIRGLLPKGFDK------LRTINCAPENG 557
              R +E RGL+ K   K      L + N A E G
Sbjct: 554 LWVRAIE-RGLIKKSVYKLMHQARLESTNLAVETG 587



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 114/286 (39%), Gaps = 2/286 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+         ++LF  +  +    D+  + +  L   Y        A     +M 
Sbjct: 259 SLIHGLCKYGRVKEAAQLFTEMAAAQATPDN--VTYTTLIDGYCRAGNIEEAVKLRGEME 316

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + + N  L  L +  ++        EM   ++  +  T N +++A+CK G + 
Sbjct: 317 ATGMLPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMT 376

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +V K M   G   +  TY  LI G C    L  A +    M   G  PN   F+ L+
Sbjct: 377 SACKVKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLV 436

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCKK        I  E+    + P+   Y +LI    + G  +    ++++M   G+ 
Sbjct: 437 DGFCKKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLV 496

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            D L Y  L      EGK   A+  +  + KN L      Y+ L T
Sbjct: 497 GDSLVYATLAYTYLTEGKPVAASNTLDGMAKNQLYITPQIYNCLCT 542


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 179/343 (52%), Gaps = 1/343 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++ K YA +   +NA   F  M  YG  P + SCN  LS+L+       A+  Y +MRR 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V+T  ++++A+CK G +ERAVE  + ME +GF  +  +YN+L+ G+ + G +  A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLIN 376
                 M + G+  N +T   LI G+CK+ K+ EA ++  EM K   V  +   Y  LI+
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           GY +VG       + +EML+ G+K+++   N+LI G CK G+  +   L+  + K  L P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           ++ +Y  L+ G C    S +AF +   M+R G  P    +  L+   C+  D+  A  + 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             ML++ + P+ +    L  GL   G    A+ L+  +  RG+
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGI 343



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 171/380 (45%), Gaps = 50/380 (13%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMR--------DYGFLPIIESCNKFLSSLLDSERVDIALG 249
           LL K Y  + K   A     +M         +Y +  +I+   K +  + D+ RV     
Sbjct: 141 LLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCK-VGKMGDAIRV----- 194

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM +  +  N++  N +++ +CK G +     +   M  +   P   +Y TL+ G+C
Sbjct: 195 -RDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYC 253

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             GL S A    + M + GI+P V+T+NTL+ G C+ G   +A R++  M    V+PN V
Sbjct: 254 RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEV 313

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y TL++G  ++G+     +L++++L  GI   I  +N +I GLCK G+   A    K +
Sbjct: 314 GYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRM 373

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAF---------------QLYKSMIRS------- 467
           ++    P+  TY  L  G C   N E AF               ++Y S+I         
Sbjct: 374 EELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKI 433

Query: 468 -------------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
                        G  PN   +  L++ +C     D+A     EM+ K  AP+ II S++
Sbjct: 434 SKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKI 493

Query: 515 YSGLHHCGKDELAMKLFRKM 534
            S L+  G+ + A  L +KM
Sbjct: 494 VSSLYRLGRIDEANMLLQKM 513



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 141/310 (45%), Gaps = 35/310 (11%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
            P IE  N  +  L  S+++   +    EM    +SPNV T   ++  +C  G +++A  
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA--------------------------- 317
            +  M   GF P+V   + ++S     G +  A                           
Sbjct: 474 AYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQNADI 533

Query: 318 -----MKFKNLMEKNGIQ---PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
                 K  + ++++ I+   PN + +N  + G CK GK+++A R F  +   + +P+  
Sbjct: 534 RKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNF 593

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI+G+   G      +L +EM+  G+  +I TYNAL+ GLCK G   +A  L   L
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKL 653

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L+PN  TY+ LI G C   +   A  L   M++ G  P+   +  L++ FC+  D 
Sbjct: 654 HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDV 713

Query: 490 DRAAEVLLEM 499
           + A ++L EM
Sbjct: 714 EEAMKLLNEM 723



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 148/342 (43%), Gaps = 35/342 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            +  L   Y    K  +A     +M   G    +  CN  ++    + +V         M
Sbjct: 174 AYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCM 233

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R+  + P+ Y+   ++  +C+ G+  +A  V   M   G  P+V TYNTL+ G C  G  
Sbjct: 234 RKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDY 293

Query: 315 SLAMKFKNLMEKNGIQPN-----------------------------------VITFNTL 339
             A++  +LM + G+ PN                                   +  FNT+
Sbjct: 294 KDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTM 353

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK G++  A   F  M+     P+ +TY TL +GY +VGN E    + E+M +  I
Sbjct: 354 INGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEI 413

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              I  YN+LI+GL    K  K   L+ ++D   L PN  TY ALI G C +   ++AF 
Sbjct: 414 FPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
            Y  MI  G  PN  I   ++S+  +    D A  +L +M++
Sbjct: 474 AYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVD 515



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 141/311 (45%), Gaps = 36/311 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   +  + +   A   + +M   GF P +  C+K +SSL    R+D A    ++
Sbjct: 453 VTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 512

Query: 254 M--------------------RR---NRIS------------PNVYTLNMVMHAFCKLGI 278
           M                    R+    +I+            PN    N+ M   CK G 
Sbjct: 513 MVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGK 572

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A   F  +    F P   TY TLI G    G ++ A   ++ M   G+ PN+ T+N 
Sbjct: 573 VNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNA 632

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK G L  A R+F ++    + PNVVTYN LI+GY + G+      L  +ML+ G
Sbjct: 633 LLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEG 692

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I   I+TY++LI G CK+   ++A  L+ ++  +++    +T+S L+ G C++    +  
Sbjct: 693 ISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEG-CIQHGDVKKM 751

Query: 459 QLYKSMIRSGC 469
               +M+   C
Sbjct: 752 SKLHNMMHMAC 762



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 167/435 (38%), Gaps = 78/435 (17%)

Query: 185 SYRMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++ +CD         + + ++ L K       +++A   +  M   G  P        L 
Sbjct: 261 AFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLD 320

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L        AL  + ++    I+ ++Y  N +++  CK+G ++ A E FK ME +G  P
Sbjct: 321 GLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKP 380

Query: 297 SVTTYNTLISGHCNKGLLSLAM--------------------------------KFKNL- 323
              TY TL  G+C  G +  A                                 K  +L 
Sbjct: 381 DGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLL 440

Query: 324 --MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+  G+ PNV+T+  LI G+C +G+L +A   + EM     +PNV+  + +++   ++
Sbjct: 441 AEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRL 500

Query: 382 GNSEMGASLYEEML--------------------------------RNGIKVDI---LTY 406
           G  +    L ++M+                                 + IK  +   + Y
Sbjct: 501 GRIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVY 560

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N  + GLCK GK   A      L   S  P+  TY  LI G         AF L   M+ 
Sbjct: 561 NIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVN 620

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L++  C++   DRA  +  ++  K + P+ +  + L  G    G    
Sbjct: 621 KGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPRE 680

Query: 527 AMKLFRKMEIRGLLP 541
           A+ L  KM   G+ P
Sbjct: 681 ALDLRGKMLKEGISP 695



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 81/157 (51%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G +P I + N  L+ L  S  +D A   + ++    + PNV T N+++  +CK G
Sbjct: 617 EMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSG 676

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
               A+++   M   G  PS+ TY++LI+G C +  +  AMK  N M+ + +   + TF+
Sbjct: 677 SPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFS 736

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L+ G  + G + + +++ + M     S  + ++  +
Sbjct: 737 KLVEGCIQHGDVKKMSKLHNMMHMACPSAGITSHKQM 773


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 183/347 (52%), Gaps = 1/347 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIA 247
           C  + + ++ L   +    +   A      MR+ G   P + + N  ++ L  + R++ A
Sbjct: 41  CAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGA 100

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM R  ++P+V + N ++  +CK+G +  ++ VF  M   G +P V T+ +LI  
Sbjct: 101 RKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHA 160

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G L  A+     M + G++ N +TF  LI GFCKKG L +A     EM+   + P+
Sbjct: 161 TCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPS 220

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VV YN LINGY ++G  ++   L  EM    +K D++TY+ +I G CK G    A  L +
Sbjct: 221 VVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQ 280

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + K  ++P+A TYS+LI G C  K    A +L+++M++ G +P++  +  L+   C+  
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           + ++A  +  EM+ K + PD +  S L +GL    + + A +L  K+
Sbjct: 341 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 167/289 (57%), Gaps = 1/289 (0%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R+ ++PNVYT N+++ A C  G +E AV V  +M   G  P+  TYNTL++  C  G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 314 LSLAMKFKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L  A +  +LM + G  +PN++TFN+++ G CK G++  A ++F EM    ++P+VV+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++GY +VG      +++ EM + G+  D++T+ +LI   CK G  ++A  LV  + + 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L  N  T++ALI G C +   + A    + M + G +P+   +  L++ +C+    D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E++ EM  K + PD +  S + SG    G  + A +L +KM  +G+LP
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLP 289



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 179/349 (51%), Gaps = 5/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L +    R +   A      MR  G  P   + N  +++   +  +D A      MR
Sbjct: 13  YNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMR 72

Query: 256 R-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PN+ T N +++  CK G +E A +VF  M   G  P V +YNTL+SG+C  G L
Sbjct: 73  EEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCL 132

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             ++   + M + G+ P+V+TF +LI   CK G L +A  + ++M+   +  N VT+  L
Sbjct: 133 HESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTAL 192

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + G  +      EEM + GI+  ++ YNALI G CK G+   A  L+++++   +
Sbjct: 193 IDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRV 252

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS +I+G C   N + AFQL + M++ G  P+   +  L+   C+ +  + A E
Sbjct: 253 KPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACE 312

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           +   ML+  + PD    + L  G  HC  G  E A+ L  +M  +G+LP
Sbjct: 313 LFENMLQLGVQPDEFTYTTLIDG--HCKEGNVEKALSLHDEMIRKGVLP 359



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        +   A   F +M   G  P + S N  LS       +  +L  + E
Sbjct: 82  VTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSE 141

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+V T   ++HA CK G +E+AV +   M   G   +  T+  LI G C KG 
Sbjct: 142 MTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGF 201

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M K GIQP+V+ +N LI G+CK G++  A  +  EM+A  V P+VVTY+T
Sbjct: 202 LDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYST 261

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +VGN +    L ++ML+ G+  D +TY++LI GLC+E +   A  L +++ +  
Sbjct: 262 IISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ LI G C   N E+A  L+  MIR G  P+   + +L++   ++     A 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKL 547
            +L ++  +   PD+I    L   +  C K E    + L +   ++GL+ K  DK+
Sbjct: 382 RLLFKLYHEDPVPDNIKYDAL---MLCCSKAEFKSVVALLKGFCMKGLM-KEADKV 433



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 184/412 (44%), Gaps = 52/412 (12%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +   +   K+FD ++      D   + ++ L   Y        +   F +M 
Sbjct: 86  SMVNGLCKAGRMEGARKVFDEMVREGLAPDV--VSYNTLLSGYCKVGCLHESLAVFSEMT 143

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    + +   +  ++ A+    +MR   +  N  T   ++  FCK G ++
Sbjct: 144 QRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLD 203

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+   + M   G  PSV  YN LI+G+C  G + LA +    ME   ++P+V+T++T+I
Sbjct: 204 DALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTII 263

Query: 341 FGFCKKG-----------------------------------KLHEANRIFSEMKATNVS 365
            G+CK G                                   +L++A  +F  M    V 
Sbjct: 264 SGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQ 323

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+  TY TLI+G+ + GN E   SL++EM+R G+  D++TY+ LI GL K  +TK+A  L
Sbjct: 324 PDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRL 383

Query: 426 VKDLDKNSLVPNASTYS---------------ALITGQCVRKNSERAFQLYKSMIRSGCR 470
           +  L     VP+   Y                AL+ G C++   + A ++Y+SM+    +
Sbjct: 384 LFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWK 443

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            +  ++ +L+   C+  +  +A     +ML    +P+S     L  GL   G
Sbjct: 444 LDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEG 495



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/364 (22%), Positives = 141/364 (38%), Gaps = 85/364 (23%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +  +    +A     +MR  G  P +   N  ++      R+D+A    +E
Sbjct: 187 VTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIRE 246

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERA------------------------------- 282
           M   R+ P+V T + ++  +CK+G ++ A                               
Sbjct: 247 MEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKR 306

Query: 283 ----VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                E+F+NM  +G  P   TY TLI GHC +G +  A+   + M + G+ P+V+T++ 
Sbjct: 307 LNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSV 366

Query: 339 LIFG--------------------------------------------------FCKKGK 348
           LI G                                                  FC KG 
Sbjct: 367 LINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGL 426

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA++++  M   N   +   Y+ LI+G+ + GN     S +++MLR+G   +  +  +
Sbjct: 427 MKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTIS 486

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GL +EG   +A   ++DL     + +A    ALI       N +    +   M R G
Sbjct: 487 LVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDG 546

Query: 469 CRPN 472
             P+
Sbjct: 547 LLPS 550



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/273 (19%), Positives = 110/273 (40%), Gaps = 52/273 (19%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP   + +  +  L + +R++ A   ++ M +  + P+ +T   ++   CK G
Sbjct: 281 KMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEG 340

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISG------------------------------ 307
            +E+A+ +   M   G +P V TY+ LI+G                              
Sbjct: 341 NVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYD 400

Query: 308 --------------------HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKK 346
                                C KGL+  A K +++++++N  + +   ++ LI G C+ 
Sbjct: 401 ALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN-WKLDGSVYSILIHGHCRG 459

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G + +A     +M  +  SPN  +  +L+ G  + G      +  +++L      D    
Sbjct: 460 GNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEAS 519

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            ALI    KEG       ++  + ++ L+P++ 
Sbjct: 520 KALIDLNRKEGNVDALIDVLCGMARDGLLPSSG 552


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 206/425 (48%), Gaps = 28/425 (6%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS 176
           Q DY++S       + ++P   T+ TH+++++ L K  K  ++   ++ +++ D      
Sbjct: 196 QLDYIMS-------RGYQP---TVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD------ 239

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
                       C+   + + ++  +    +    A D F  MR  G  P + + N  + 
Sbjct: 240 ------------CEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            + +S +   A   +KEM    + P+V T ++++ A CK G++  A+ VF  M  +   P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY++LI G C   L   +    N M    I+P+V+TF+  +  FCKKG + EA  I 
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + M    + PNVVTYN+L++GY      +    +++ M+  G   D+L+YN LI G CK 
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +  +A  L  ++    L PN+ T++ LI+G C       A +L+K M   GC P+   +
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+S FC++   D A  +   + +  + P+ +I   L  G+   GK E A +LF  + I
Sbjct: 528 STLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSI 587

Query: 537 RGLLP 541
             L P
Sbjct: 588 EELQP 592



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 189/351 (53%), Gaps = 2/351 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L        +   A +    +   G+ P + +    ++ L    +   A+ + 
Sbjct: 173 SIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM 232

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K+M      P V + ++++ + CK  ++  AV++F +M S+G  P+V TYN+LI G CN 
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNS 292

Query: 312 GLLSLA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G    A + FK ++E N ++P+V+TF+ L+   CK+G + EA  +F +M    + P++VT
Sbjct: 293 GQWKQASILFKEMLEWN-MKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y++LI+G  +    +  ++L  EML   I+ D++T++  +   CK+G   +A  ++  + 
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  L PN  TY++L+ G C+    + A +++  M+  GC P+   + +L+  +C++E  D
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A ++  EM  K + P+SI  + L SGL   G+   A +LF+KM   G  P
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPP 522



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 181/389 (46%), Gaps = 45/389 (11%)

Query: 197 DLLFKTYAHRKK--------FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           D  F  +A R K        F +A   F QM      P I   N+ L++L+  +  D  +
Sbjct: 65  DASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVV 124

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             Y++M    +S +VYTL ++++  C L ++     V   +  +GF PS+ T+NTLI+G 
Sbjct: 125 SIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGL 184

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK-------------------- 348
           C +G +  AM+  + +   G QP V T   ++ G CK GK                    
Sbjct: 185 CIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEV 244

Query: 349 ---------------LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
                          ++EA  +F  M++  +SP VVTYN+LI G    G  +  + L++E
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ML   +K D++T++ L+  LCKEG   +A  +   + + ++ P+  TYS+LI G C    
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + +  L   M+    RP+   F + +  FC+      A  ++  M+E+ + P+ +  + 
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424

Query: 514 LYSGLH-HCGKDELAMKLFRKMEIRGLLP 541
           L  G   H   DE A K+F  M  +G  P
Sbjct: 425 LMDGYCLHSQMDE-ARKVFDIMVNKGCAP 452



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 109/243 (44%), Gaps = 2/243 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  S  +   S L + +L   R      + F +    +  +     A      M 
Sbjct: 354 SLIHGVCKSSLWKESSTLLNEMLS--RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + N  +       ++D A   +  M     +P+V + N+++  +CK   I+
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F  M   G  P+  T+ TLISG C  G    A +    M  +G  P++IT++TL+
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK G L EA  +F  +K + + PN V    L+ G  + G  E    L+  +    ++
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQ 591

Query: 401 VDI 403
            D+
Sbjct: 592 PDV 594



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 113/244 (46%), Gaps = 17/244 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGIL------DSDSFDLPSKLF---------DSI--LY 184
           T+S ++H + K+  +K S ++L  +L      D  +F +   +F          SI  L 
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
             R    + + ++ L   Y    +   A   F  M + G  P + S N  +     SER+
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI 470

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D A   + EM    ++PN  T   ++   C+ G    A E+FK M S G  P + TY+TL
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           +SG C  G L  A+     ++K+ ++PN +    L+ G CK GKL +A  +FS +    +
Sbjct: 531 LSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEEL 590

Query: 365 SPNV 368
            P+V
Sbjct: 591 QPDV 594


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 231/489 (47%), Gaps = 7/489 (1%)

Query: 79  LDFVNIAYSHLIHSDWKKLTALS---THLTPFRVKHVLLKVQ-KDYVLSLEFFTWVQTHK 134
           L+F       L  ++WK +   S   + L P  ++ VL + Q  D    L+FF W Q+  
Sbjct: 41  LNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYWSQSQM 100

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR-MCDSSP 193
                L++ SI+   L  +  F  +  +L  ++ +      S + DS+L+ +R    SSP
Sbjct: 101 GVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYS--SSSILDSVLFWFRNYGGSSP 158

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VFD+L  +Y        A + F   ++   L  +  CN  L  LL    +++    Y  
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   ++  +VYT   ++ A CK G +  A  V   M+  G  P+   Y+ +I G C  G 
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++ K  M + G+ PN  T+  +  G C+  +++EA   F EM+ T + P+    + 
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ + G+ +    + + M+  GI ++++TYN LI GLCK GK +KAA ++K +    
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN+ T+  LI G C   N  RA +L   M +    P+   +  +++  C  +D   A 
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLAN 458

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           ++L +M    + P+ ++ S L       G+ E A +L   M   G+ P  F     I+C 
Sbjct: 459 KLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCL 518

Query: 554 PENGEKESG 562
            + G+ E  
Sbjct: 519 SKAGKMEEA 527



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 196/407 (48%), Gaps = 3/407 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+       L +KL + + +S      + +V+ +L   YA   +   A     
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVVVYSILIMAYASEGRIEEARRLLD 497

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P I   N  +S L  + +++ A  +  E++   + P+  T    +  + K G
Sbjct: 498 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 557

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + F  M   G +P+   Y  LI+GH   G L  A+     +   G+ P+V T +
Sbjct: 558 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCS 617

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             I G  K G++ EA ++FSE+K   + P+V TY++LI+G+ + G  E    L++EM   
Sbjct: 618 AFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 677

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI  +I  YNAL+ GLCK G  ++A  L   + +  L P++ TYS +I G C  +N   A
Sbjct: 678 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 737

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F L+  M   G +P+  ++  L+   C+  D ++A  +  EML+K  A  ++  + L  G
Sbjct: 738 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDG 796

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
                K + A +LF++M  + ++P        I+   + G+ E   L
Sbjct: 797 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 843



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 194/409 (47%), Gaps = 22/409 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           + L T+++++H L K  K + +  IL+G++                     C  +   F 
Sbjct: 366 INLITYNVLIHGLCKFGKMEKAAEILKGMVTLG------------------CKPNSRTFC 407

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL + Y        A +   +M     +P   S    ++ L   + + +A    ++M  +
Sbjct: 408 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 467

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PNV   ++++ A+   G IE A  +   M   G  P +  YN +IS     G +  A
Sbjct: 468 GLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 527

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             +   ++  G++P+ +TF   I G+ K GK+ EA + F EM    + PN   Y  LING
Sbjct: 528 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 587

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           + + GN     S++  +   G+  D+ T +A I GL K G+ ++A  +  +L +  LVP+
Sbjct: 588 HFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 647

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TYS+LI+G C +   E+AF+L+  M   G  PN  I+  L+   C++ D  RA ++  
Sbjct: 648 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 707

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            M EK + PDS+  S +  G  +C  + +  A  LF +M  +G+ P  F
Sbjct: 708 GMPEKGLEPDSVTYSTMIDG--YCKSENVAEAFSLFHEMPSKGVQPHSF 754



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 174/368 (47%), Gaps = 34/368 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A   F ++++ G +P + + +  +S       V+ A   + EM    I+PN++  N
Sbjct: 628 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 687

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G I+RA ++F  M   G  P   TY+T+I G+C    ++ A    + M   
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 747

Query: 328 GIQPN----------------------------------VITFNTLIFGFCKKGKLHEAN 353
           G+QP+                                   ++FNTLI G+CK  K+ EA+
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 807

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F EM A  + P+ VTY T+I+ + + G  E    L++EM    + VD +TY +L+ G 
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 867

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            K G++ +   L + +    + P+  TY  +I   C   N   AF+L   ++  G     
Sbjct: 868 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 927

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            I ++L++  C+ ED   A+++L EM E  + P     + L    H  GK + A ++F  
Sbjct: 928 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEG 987

Query: 534 MEIRGLLP 541
           ++  GL+P
Sbjct: 988 VKSLGLVP 995



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 168/373 (45%), Gaps = 35/373 (9%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K+   A  TF +M+  G  P   +C+  +   +    +D  L     M    I  N+ T 
Sbjct: 312 KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITY 371

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMG--------------------------------- 293
           N+++H  CK G +E+A E+ K M ++G                                 
Sbjct: 372 NVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 431

Query: 294 --FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
              +PS  +Y  +I+G C+   LSLA K    M  +G++PNV+ ++ LI  +  +G++ E
Sbjct: 432 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEE 491

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A R+   M  + V+P++  YN +I+   + G  E  ++   E+   G+K D +T+ A IL
Sbjct: 492 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 551

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G  K GK  +AA    ++  + L+PN   Y+ LI G     N   A  +++ +   G  P
Sbjct: 552 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +       +    +N     A +V  E+ EK + PD    S L SG    G+ E A +L 
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671

Query: 532 RKMEIRGLLPKGF 544
            +M ++G+ P  F
Sbjct: 672 DEMCLKGIAPNIF 684



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 1/324 (0%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             +++ L          + A   F  M + G  P   + +  +     SE V  A   + E
Sbjct: 684  FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M    + P+ +  N ++H  CK G +E+A+ +F+ M   GF  +++ +NTLI G+C    
Sbjct: 744  MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCK 802

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A +    M    I P+ +T+ T+I   CK GK+ EAN +F EM+  N+  + VTY +
Sbjct: 803  IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            L+ GY ++G S    +L+E+M+  G+K D +TY  +I   CKE    +A  L  ++    
Sbjct: 863  LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            ++   + +  LIT  C R++   A +L   M   G +P+      L+ +F +    D A 
Sbjct: 923  MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982

Query: 494  EVLLEMLEKCMAPDSIILSELYSG 517
             V   +    + PD+  L +L +G
Sbjct: 983  RVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 176/402 (43%), Gaps = 35/402 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            ++ L+ +          A +    M + G +P   +     + L  ++R++ A   ++E
Sbjct: 264 FIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEE 323

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN--- 310
           M++  + P+    + ++  F + G I+  + +   M S G   ++ TYN LI G C    
Sbjct: 324 MQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGK 383

Query: 311 --------KGLLSL------------------------AMKFKNLMEKNGIQPNVITFNT 338
                   KG+++L                        A++  + MEK  + P+ +++  
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I G C    L  AN++  +M  + + PNVV Y+ LI  Y   G  E    L + M  +G
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  DI  YNA+I  L K GK ++A+  + ++    L P+A T+ A I G         A 
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 563

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + +  M+  G  PN  ++ +L++   +  +   A  +   +    + PD    S    GL
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
              G+ + A+K+F +++ +GL+P  F     I+   + GE E
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 665



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 142/313 (45%), Gaps = 5/313 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  S       KLFD +    +  +   + +  +   Y   +    A   F +M 
Sbjct: 688 ALVDGLCKSGDIQRARKLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P     N  +        ++ A+  ++EM +   +  + + N ++  +CK   I+
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 804

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTL 339
            A ++F+ M +   +P   TY T+I  HC  G +  A + FK + E+N I  + +T+ +L
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI-VDTVTYTSL 863

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++G+ K G+  E   +F +M A  V P+ VTY  +I  + +  N      L +E++  G+
Sbjct: 864 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
                 ++ LI  LCK     +A+ L+ ++ +  L P+ +  + L+         + A +
Sbjct: 924 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 460 LYKSMIRSGCRPN 472
           +++ +   G  P+
Sbjct: 984 VFEGVKSLGLVPD 996



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 117/272 (43%), Gaps = 1/272 (0%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             V++ L            A + F +M   GF   + S N  +     S ++  A   ++E
Sbjct: 754  FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQE 812

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M   +I P+  T   V+   CK G +E A  +FK M+    I    TY +L+ G+   G 
Sbjct: 813  MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 872

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             S        M   G++P+ +T+  +I+  CK+  L EA ++  E+    +      ++ 
Sbjct: 873  SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 932

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LI    +  +    + L +EM   G+K  +   N L+    + GK  +A  + + +    
Sbjct: 933  LITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLG 992

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            LVP+ +T   L+ G     +SE A  L K ++
Sbjct: 993  LVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 187/406 (46%), Gaps = 46/406 (11%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L G++ +   DL  K F S L   R        F+ +        + R A D   
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALR--RRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSE------RVDIALGFYKEMRRNRISPNVYTLNMVMH 271
            ++ +G  P + + N  +              VD+ L   KEM    ISP   T  ++++
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL---KEMVEAGISPTAVTFGVLIN 272

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK      AV VF+ M+  G   SV TYN+LISG C++G +   +K    ME  G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNV--------------------------- 364
           N ITF  ++ GFCKKG + +AN     M   NV                           
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 365 --------SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                   SPNV TYN LI G+ + G+    + L +EM   GI+ D++TYN LI  LC +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ +KA  L+ ++ +  L PN  TY+ +I G C + N + A+++   M +   R N   +
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            + +  FCQ    D A ++L EML+KC+ P+ I    +  G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 184/354 (51%), Gaps = 7/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDIALGFY 251
           L+ D+L    A   +   A D F    +      P   S N  L+ L+ ++RVD+A   +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +   R R+SP++YT N V+   C++G + +A +V K++++ G  PSV TYN+LI G+C K
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 312 G----LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           G    +  + M  K ++E  GI P  +TF  LI G+CK      A R+F EMK   ++ +
Sbjct: 240 GGAGNMYHVDMLLKEMVEA-GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN+LI+G    G  E G  L EEM   G+  + +T+  ++ G CK+G    A   + 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + + ++ P+   Y+ LI G       E A  + ++M + G  PN   +  L++ F ++ 
Sbjct: 359 GMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+  A+ +L EM EK +  D +  + L   L   G+   A+KL  +M   GL P
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 106/226 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  + K +  +    +A D    M +    P +      +       +++ A+   + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  ISPNV T N ++  F + G    A  +   M+  G    V TYN LI   C KG 
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M + G++PN +T+NT+I GFC KG +  A  I + M+      NVVTYN 
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            I  + Q+G  +    L  EML   +  + +TY  +  G+ ++G T
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 227/510 (44%), Gaps = 43/510 (8%)

Query: 89  LIHSDWKKLTALSTH---LTPFRVKHVLLKVQKDYVLSLE-FFTWVQTHKPSSLTLETHS 144
           L   DW+ L     +   L P  V  VL K + D  + L+ FF W  +   +   L ++S
Sbjct: 65  LKRKDWQILLNNEDNVRKLNPEIVCSVLQKSEIDDSVRLQNFFYWSSSKMSTPQYLHSYS 124

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-VFDLLFKTY 203
           I+   L  +     ++++L  +L +     P ++ DS++  YR    S L VFD+    +
Sbjct: 125 ILAIRLCNSGLIHQADNMLEKLLQTRK--PPLEILDSLVRCYREFGGSNLTVFDIFIDKF 182

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
                   A+  F      GF P +  CN  +  LL +  + +    Y  M   +I P+V
Sbjct: 183 RVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDV 242

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           YT   V+ A CK+G + +   V   ME     P++ TYN  I G C  G +  A++ K L
Sbjct: 243 YTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKKL 301

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN---------------- 367
           M + G+ P+  T+  L+ GFCK+ +  EA  IF  M ++ ++PN                
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGN 361

Query: 368 -------------------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
                              VVTYN +I G  + G      SL+ EML  G++ D  TYN 
Sbjct: 362 IEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNL 421

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G  K     KA  L+ ++    L P+  TYS LI+G C   + ++A ++   MIR+G
Sbjct: 422 LIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +PN  ++  L+  + Q   ++ A E+L  M+   + PD    + L  GL    K E A 
Sbjct: 482 VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAK 541

Query: 529 KLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            L   M  +G+ P        IN   ++GE
Sbjct: 542 MLLVDMGEKGIKPNAHTYGAFINLYSKSGE 571



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/383 (30%), Positives = 184/383 (48%), Gaps = 36/383 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            ++  L K Y    ++  A +    M   G LP +   N  +  L  +++V+ A     +
Sbjct: 487 FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVD 546

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I PN +T    ++ + K G I+ A   FK+M S G +P+   Y  LI GHC+ G 
Sbjct: 547 MGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGN 606

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
              A+  FK ++EK G+ P++  ++ +I    K GK  EA  +F +   T V P+V  YN
Sbjct: 607 TVEALSTFKCMLEK-GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYN 665

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+G+ + G+ E  + LY+EML NGI  +I+ YN LI GLCK G+  KA  L  ++++ 
Sbjct: 666 SLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI----------------- 475
            LVP+  TYS +I G C   N   AF+L+  MI  G  P+ +I                 
Sbjct: 726 DLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKA 785

Query: 476 -----------------FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                            F  L+ +FC++     A E+  +M++K + P+ +  + L    
Sbjct: 786 LSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAY 845

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
                 E A +LF  ME R ++P
Sbjct: 846 GKAEMMEEAEQLFLDMETRNIIP 868



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 202/423 (47%), Gaps = 14/423 (3%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T  + L+++T N       +++ GI  +        LF+ +L +    D+    ++LL  
Sbjct: 374 TRGLKLNVVTYN-------AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT--WTYNLLID 424

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y        A +   +M+     P   + +  +S L  S  +  A     +M RN + P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV+    ++ A+ +    E A+E+ K M + G +P +  YN LI G C    +  A    
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLL 544

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + GI+PN  T+   I  + K G++  A R F +M ++ + PN V Y  LI G+  V
Sbjct: 545 VDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDV 604

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           GN+    S ++ ML  G+  DI  Y+A+I  L K GKTK+A  +     K  +VP+   Y
Sbjct: 605 GNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLY 664

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++LI+G C   + E+A QLY  M+ +G  PN  ++  L++  C+  +  +A E+  E+ E
Sbjct: 665 NSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEE 724

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           K + PD +  S +  G    G    A KLF +M  +G+ P G+     I C   +G  + 
Sbjct: 725 KDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY-----IYCILIDGCGKE 779

Query: 562 GGL 564
           G L
Sbjct: 780 GNL 782



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 159/349 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + LL   +  +K+ + A   F  M   G  P   +    +   +    ++ AL    EM 
Sbjct: 314 YTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMI 373

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  NV T N ++    K G + +A+ +F  M   G  P   TYN LI G+     ++
Sbjct: 374 TRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMA 433

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M+   + P+  T++ LI G C    L +AN +  +M    V PNV  Y TLI
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLI 493

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             Y Q    EM   L + M+ NG+  D+  YN LI+GLC+  K ++A  L+ D+ +  + 
Sbjct: 494 KAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIK 553

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PNA TY A I         + A + +K M+ SG  PN  I+ +L+   C   +   A   
Sbjct: 554 PNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALST 613

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              MLEK + PD    S +   L   GK + AM +F K    G++P  F
Sbjct: 614 FKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVF 662



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 168/381 (44%), Gaps = 34/381 (8%)

Query: 195  VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
             +  +  + +   K + A   F +    G +P +   N  +S       ++ A   Y EM
Sbjct: 628  AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687

Query: 255  RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              N I+PN+   N +++  CKLG + +A E+F  +E    +P V TY+T+I G+C  G L
Sbjct: 688  LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747

Query: 315  SLAMKFKNLMEKNGIQPN----------------------------------VITFNTLI 340
            + A K  + M   GI P+                                  +  FN+LI
Sbjct: 748  TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 807

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              FCK GK+ EA  +F +M    ++PN+VTY  LI+ YG+    E    L+ +M    I 
Sbjct: 808  DSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNII 867

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             + LTY +L+L   + G   K   L KD++   +  +A  Y  + +  C    S  A +L
Sbjct: 868  PNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKL 927

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
                +  G +    +F+ L+   C+ +      E+L EM ++ ++  S   + L  G + 
Sbjct: 928  LNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYK 987

Query: 521  CGKDELAMKLFRKMEIRGLLP 541
             G ++ A K+   M+  G +P
Sbjct: 988  SGNEDEASKVLGVMQRLGWVP 1008



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 159/344 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  + +L     H    + A +   QM   G  P +      + + +   R ++A+   
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELL 509

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K M  N + P+++  N ++   C+   +E A  +  +M   G  P+  TY   I+ +   
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G + +A ++   M  +GI PN + +  LI G C  G   EA   F  M    + P++  Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + +I+   + G ++    ++ + L+ G+  D+  YN+LI G CKEG  +KA+ L  ++  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           N + PN   Y+ LI G C      +A +L+  +      P+   +  ++  +C++ +   
Sbjct: 690 NGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTE 749

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           A ++  EM+ K ++PD  I   L  G    G  E A+ LF + +
Sbjct: 750 AFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ 793


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 189/388 (48%), Gaps = 10/388 (2%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKF 209
           R F +   ILR  L +  F+    LF       RM  S PL     F  L    A  K+F
Sbjct: 45  RAFSNYRKILRNGLHNLQFNEALDLFT------RMVHSRPLPSIVDFTRLLSVIAKMKRF 98

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
                 F QM+  G  P++ +CN  ++ +  S +   A  F  +M +    P++ T   +
Sbjct: 99  DVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSL 158

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +H FC    IE A+ +F  +  MGF P+V TY TLI   C    L+ A++  N M  NGI
Sbjct: 159 LHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGI 218

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +PNV+T+N+L+ G C+ G+  +A  +  +M    + PNV+T+  LI+ + +VG       
Sbjct: 219 RPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKE 278

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LY+ M++  +  D+ TY ALI GLC  G+  +A  +   ++ N   PN  TY+ LI G C
Sbjct: 279 LYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFC 338

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             K  E   +++  M + G   N   + +L+  +C     D A EV  +M  +   PD  
Sbjct: 339 KSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIR 398

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIR 537
             + L  GL + G  E A+ +F+ M  R
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKR 426



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 183/347 (52%), Gaps = 4/347 (1%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  +F  A D F +M     LP I    + LS +   +R D+ +  +++M+   ISP +Y
Sbjct: 59  HNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLY 118

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N+VM+  C+     RA      M  +GF P + T+ +L+ G C+   +  A+   + +
Sbjct: 119 TCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQI 178

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G +PNV+T+ TLI   CK   L+ A  IF++M    + PNVVTYN+L++G  ++G  
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
              A L  +M++ GI+ +++T+ ALI    K GK  +A  L K + + S+ P+  TY+AL
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C     + A Q++  M  +G  PN+  +  L+  FC+++  +   ++  EM +K +
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
             ++I  + L  G    G+ ++A ++F +M  R   P     +RT N
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPP----DIRTYN 401



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/348 (32%), Positives = 167/348 (47%), Gaps = 4/348 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+L G    +  +    LFD I+   +R    + + +  L       +   +A + F QM
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFR---PNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D G  P + + N  +S L +  R   A    ++M +  I PNV T   ++ AF K+G I
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E++K M  M   P V TY  LI+G C  G L  A +   LME NG  PN +T+ TL
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFCK  ++ +  +IF EM    +  N +TY  LI GY  VG  ++   ++ +M     
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI TYN L+ GLC  G  +KA  + K + K  +  N  TY+ +I G C     E AF 
Sbjct: 394 PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFD 453

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           L+ S+   G +PN   +  ++S FC+      A  +  +M E    P+
Sbjct: 454 LFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 187/406 (46%), Gaps = 46/406 (11%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L G++ +   DL  K F S L   R        F+ +        + R A D   
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALR--RRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSE------RVDIALGFYKEMRRNRISPNVYTLNMVMH 271
            ++ +G  P + + N  +              VD+ L   KEM    ISP   T  ++++
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL---KEMVEAGISPTAVTFGVLIN 272

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK      AV VF+ M+  G   SV TYN+LISG C++G +   +K    ME  G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNV--------------------------- 364
           N ITF  ++ GFCKKG + +AN     M   NV                           
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 365 --------SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                   SPNV TYN LI G+ + G+    + L +EM   GI+ D++TYN LI  LC +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ +KA  L+ ++ +  L PN  TY+ +I G C + N + A+++   M +   R N   +
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            + +  FCQ    D A ++L EML+KC+ P+ I    +  G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 183/354 (51%), Gaps = 7/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDIALGFY 251
           L+ D+L    A   +   A D F    +      P   S N  L+ L+ ++RVD+A   +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +   R R+SP++YT N V+   C++G + +A +V K++++ G  PSV TYN+LI G+C K
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 312 G----LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           G    +  + M  K ++E  GI P  +TF  LI G+CK      A R+F EMK   ++ +
Sbjct: 240 GGAGNMYHVDMLLKEMVEA-GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN+LI+G    G  E G  L EEM   G+  + +T+  ++ G CK+G    A   + 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + + ++ P+   Y+ LI         E A  + ++M + G  PN   +  L++ F ++ 
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+  A+ +L EM EK +  D +  + L   L   G+   A+KL  +M   GL P
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  + K +  +    +A D    M +    P +   N  +       +++ A+   + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  ISPNV T N ++  F + G    A  +   M+  G    V TYN LI   C KG 
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M + G++PN +T+NT+I GFC KG +  A  I + M+      NVVTYN 
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            I  + Q+G  +    L  EML   +  + +TY  +  G+ ++G T
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 203/422 (48%), Gaps = 4/422 (0%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS---DSFDLPSKLFD 180
             FF ++ +  P   TL  +S + H L+ +     + S+   I+      S         
Sbjct: 83  FSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLI 142

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
             + ++   + S LVFD L   Y   +   +A      ++   F   +  C+  L  ++ 
Sbjct: 143 QTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMK 202

Query: 241 -SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +++      FY E+      PNVY  N++MH FCK+G +  A  VF  +   G  PSV 
Sbjct: 203 LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           ++NTLISG+C    +      K++ME   I P+V T++ LI G CK+ ++ EAN +F EM
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               + PN VT+ TLI+G  + G  ++    +E M   GI+ D++TYNALI GLC++G  
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           K+A  L+ ++  N   P+  T++ L+ G C   + + A ++   M+  G   +   F  L
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTAL 442

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +S  C++     A  +L +ML     PD    + +       G  ++  KL ++M+  G 
Sbjct: 443 ISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGR 502

Query: 540 LP 541
           +P
Sbjct: 503 VP 504



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 169/327 (51%), Gaps = 2/327 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F++L   +       NA   F ++   G  P + S N  +S    S+ V+        M
Sbjct: 228 LFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVM 287

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              RISP+V+T + +++  CK   +E A  +F  M  MG +P+  T+ TLI G C  G +
Sbjct: 288 ESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKI 347

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            LA++   +M+  GI+P++IT+N LI G C+ G L EA ++ +EM      P+ +T+ TL
Sbjct: 348 DLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTL 407

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++G  + G+ +    + + M+  GI++D + + ALI GLC++G+ + A  ++KD+     
Sbjct: 408 MDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGH 467

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+ +I   C + + +   +L K M R G  P    +  LM+ FC+      A  
Sbjct: 468 KPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKM 527

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC 521
           +L  ML   + P+ I  + L  G  HC
Sbjct: 528 LLHAMLNMEVVPNDITFNILLDG--HC 552



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 162/325 (49%), Gaps = 1/325 (0%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE-RAVEVFKNMESMGFIPSV 298
           DSE ++ A+   + +++N  S  V   + ++    KL        E +  +   G+ P+V
Sbjct: 167 DSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNV 226

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
             +N L+ G C  G +  A    + + + G++P+V++FNTLI G+C+   + E   + S 
Sbjct: 227 YLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSV 286

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M++  +SP+V TY+ LING  +    E    L++EM   G+  + +T+  LI G CK GK
Sbjct: 287 MESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGK 346

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A    + +    + P+  TY+ALI G C   + + A +L   MI +G +P+K  F  
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           LM   C++ D D A E+   M+E+ +  D +  + L SGL   G+   A ++ + M   G
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466

Query: 539 LLPKGFDKLRTINCAPENGEKESGG 563
             P        I+C  + G+ + G 
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGA 491



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 148/283 (52%), Gaps = 6/283 (2%)

Query: 181 SILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           S++ S R+   SP VF    L        +   A   F +M + G +P   +    +   
Sbjct: 285 SVMESERI---SPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQ 341

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               ++D+AL  ++ M+   I P++ T N +++  C+ G ++ A ++   M   GF P  
Sbjct: 342 CKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDK 401

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            T+ TL+ G C  G +  A++ K+ M + GI+ + + F  LI G C+ G++ +A R+  +
Sbjct: 402 ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKD 461

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M +    P+  TY  +I+ + + G+ +MGA L +EM R+G    ++TYNAL+ G CK+G+
Sbjct: 462 MLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQ 521

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            K A  L+  +    +VPN  T++ L+ G C +  S   F+++
Sbjct: 522 MKNAKMLLHAMLNMEVVPNDITFNILLDGHC-KHGSSVDFKIF 563



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 143/309 (46%), Gaps = 2/309 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +FD I  S R    S + F+ L   Y   K           M      P + + +  ++ 
Sbjct: 248 VFDEI--SRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALING 305

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L    RV+ A G + EM    + PN  T   ++   CK G I+ A+  F+ M+  G  P 
Sbjct: 306 LCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPD 365

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TYN LI+G C  G L  A K  N M  NG +P+ ITF TL+ G CK G +  A  I  
Sbjct: 366 LITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKD 425

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    +  + V +  LI+G  + G       + ++ML  G K D  TY  +I   CK+G
Sbjct: 426 RMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKG 485

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             K  A L+K++ ++  VP   TY+AL+ G C +   + A  L  +M+     PN   F 
Sbjct: 486 DVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFN 545

Query: 478 MLMSTFCQN 486
           +L+   C++
Sbjct: 546 ILLDGHCKH 554


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 215/446 (48%), Gaps = 30/446 (6%)

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK------- 177
           E F  +++ + S  ++ T++ +L  L +  K + + ++ + +LD  S D+  +       
Sbjct: 135 ELFEHMKSVECSP-SMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVIT 193

Query: 178 ---LFDSILYSYRM--------------CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
              L D +  + R+              C    + + +L        K   A +   +M 
Sbjct: 194 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 253

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G +P + + N  L  L  + RV  AL   ++M     +PNV T   ++   CK+G ++
Sbjct: 254 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 313

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +  +M   G  P +  YN LI+G C    +  ++         GI+P+V+T++++I
Sbjct: 314 DACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVI 373

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           +G C+  +L EA R+   +K+    P+V+ Y+TLI+G  + G  +    LYE M  +G  
Sbjct: 374 YGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCD 433

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TY+ LI GLCK G+  +A  L+  + +    P+  TY++LI G C   + + A +L
Sbjct: 434 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIEL 493

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP-----DSIILSELY 515
            + M RS C P+   + +L+   C+ E  D A  +L +   +C+A      D+I  S L 
Sbjct: 494 VEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLI 553

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   G+   A+  F++M   G++P
Sbjct: 554 DGLCKAGRVAEALDYFQEMIDNGVIP 579



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 151/305 (49%), Gaps = 7/305 (2%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   + EMR   + PNV+  ++++   CK      A+  F+ M+  G +     Y  
Sbjct: 25  IDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTA 84

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+SG   +  L  A+   + M  +G +PNV+T+N+LI G CK  +   A  +F  MK+  
Sbjct: 85  LLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVE 144

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEML-RNGIKVD------ILTYNALILGLCKE 416
            SP++VTYNTL++G  + G  E   +L++EML R    +D      ++TY+ LI GLCK 
Sbjct: 145 CSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKA 204

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +  +A  L++ +      P+  TY+ L+ G C       A+++ + M+ +GC PN   +
Sbjct: 205 NRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTY 264

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+   C+      A  ++ +M  +   P+ +    L  GL   G+ + A  +   M  
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324

Query: 537 RGLLP 541
           +G  P
Sbjct: 325 KGGTP 329



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 165/361 (45%), Gaps = 7/361 (1%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           +C      +  L + +    +   A   F +MR    +P +  C+  +  L  ++R   A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++ M+ + I  +      ++    K   +++A+ +   M   G  P+V TYN+LI G
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-------K 360
            C       A +    M+     P+++T+NTL+ G  + GKL  A  +F EM        
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
               SPNV+TY+ LI+G  +         L E M   G   D++TY  L+ GLCKE K  
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  +++++     VPN  TY++L+ G C  +    A  L + M   GC PN   +  L+
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+      A  +L +M++K   PD +I + L +GL    + + ++ L R+    G+ 
Sbjct: 304 DGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIK 363

Query: 541 P 541
           P
Sbjct: 364 P 364



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 162/365 (44%), Gaps = 61/365 (16%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY---------------- 184
           T++I++  L K  K  ++  +LR +LD+    +P+ + ++S+L+                
Sbjct: 228 TYTILVDGLCKESKVAAAWEVLREMLDAGC--VPNLVTYNSLLHGLCRARRVSDALALMR 285

Query: 185 --SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
             + R C  + + +  L        + ++A      M D G  P +   N  ++ L  ++
Sbjct: 286 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 345

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD ++   +      I P+V T + V++  C+   ++ A  +   ++S G  P V  Y+
Sbjct: 346 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 405

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLI G C  G +  A     +M  +G   +V+T++TLI G CK G++ EA+ + + M   
Sbjct: 406 TLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 465

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN------------------------- 397
              P+ +TYN+LI G   + + +    L EEM R+                         
Sbjct: 466 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 525

Query: 398 ---------------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                          G  +D + Y++LI GLCK G+  +A    +++  N ++P+  TYS
Sbjct: 526 VVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS 585

Query: 443 ALITG 447
            L+ G
Sbjct: 586 ILLEG 590



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 9/227 (3%)

Query: 211 NATDTFCQMRDY----GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           N  D  C++  Y    G  P +   +  +  L  + +VD A   Y+ M  +    +V T 
Sbjct: 380 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTY 439

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           + ++   CK G ++ A  +   M  MG  PS  TYN+LI G C+   L  A++    ME+
Sbjct: 440 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 499

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP-----NVVTYNTLINGYGQV 381
           +   P+ +T+N LI G C+  ++  A  +  + KA  V+      + + Y++LI+G  + 
Sbjct: 500 SNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKA 559

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           G        ++EM+ NG+  D +TY+ L+ GL K     +  +LV D
Sbjct: 560 GRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 187/406 (46%), Gaps = 46/406 (11%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L G++ +   DL  K F S L   R        F+ +        + R A D   
Sbjct: 158 SVNALLAGLVGAKRVDLAEKAFRSALR--RRVSPDIYTFNTVISGLCRIGQLRKAGDVAK 215

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSE------RVDIALGFYKEMRRNRISPNVYTLNMVMH 271
            ++ +G  P + + N  +              VD+ L   KEM    ISP   T  ++++
Sbjct: 216 DIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL---KEMVEAGISPTAVTFGVLIN 272

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK      AV VF+ M+  G   SV TYN+LISG C++G +   +K    ME  G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNV--------------------------- 364
           N ITF  ++ GFCKKG + +AN     M   NV                           
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392

Query: 365 --------SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                   SPNV TYN LI G+ + G+    + L +EM   GI+ D++TYN LI  LC +
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ +KA  L+ ++ +  L PN  TY+ +I G C + N + A+++   M +   R N   +
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTY 512

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            + +  FCQ    D A ++L EML+KC+ P+ I    +  G+   G
Sbjct: 513 NVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 183/354 (51%), Gaps = 7/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDIALGFY 251
           L+ D+L    A   +   A D F    +      P   S N  L+ L+ ++RVD+A   +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +   R R+SP++YT N V+   C++G + +A +V K++++ G  PSV TYN+LI G+C K
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKK 239

Query: 312 G----LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           G    +  + M  K ++E  GI P  +TF  LI G+CK      A R+F EMK   ++ +
Sbjct: 240 GGAGNMYHVDMLLKEMVEA-GISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN+LI+G    G  E G  L EEM   G+  + +T+  ++ G CK+G    A   + 
Sbjct: 299 VVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWID 358

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + + ++ P+   Y+ LI         E A  + ++M + G  PN   +  L++ F ++ 
Sbjct: 359 GMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSG 418

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+  A+ +L EM EK +  D +  + L   L   G+   A+KL  +M   GL P
Sbjct: 419 DWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEP 472



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 107/226 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  + K +  +    +A D    M +    P +   N  +       +++ A+   + 
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  ISPNV T N ++  F + G    A  +   M+  G    V TYN LI   C KG 
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M + G++PN +T+NT+I GFC KG +  A  I + M+      NVVTYN 
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNV 514

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            I  + Q+G  +    L  EML   +  + +TY  +  G+ ++G T
Sbjct: 515 FIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYT 560


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 224/471 (47%), Gaps = 20/471 (4%)

Query: 93  DWKKLTALSTHLTP--FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
           D  K   L  HL+P  F    + LK   +   +L FF +V        T  ++ +++H+L
Sbjct: 71  DCAKCKELVPHLSPQEFDSCFLALKSNVNPKTALNFFHFVSETCKFRFTARSYCVLIHLL 130

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR--MCDSSPLVF---------DLL 199
             N     +  +L  ++D       ++ F+S  +     M D + LVF         DLL
Sbjct: 131 VGNDLLSPARLLLIRLIDGKVPAFYARNFESRHFEIAQIMADFN-LVFEPVIGVKIADLL 189

Query: 200 FKTYAHRKK---FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
              Y+ + K   F  A D F  +   G  P +++C   LSSL+ +  +  +   Y  +  
Sbjct: 190 VHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICL 249

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P+V+  + +++AFCK    + A+ +F  ME +G  P+V TYN +I G C  G L  
Sbjct: 250 GGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDE 309

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +FK  M K  + P++IT++  I G  K  K+ EAN +  EM      PN V YNTLI+
Sbjct: 310 AYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLID 369

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           GY ++GN      + ++ML  GI  + +T N+LI G CK  +  +A  +++++    L  
Sbjct: 370 GYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPI 429

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  ++S +I   C++     A    + M+    RPN  +   L+S  C+      A E+ 
Sbjct: 430 NQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELW 489

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
             +L K   P+ +  + L  GL   G  +  +KL R M  RGL+   FD++
Sbjct: 490 CRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLV---FDRI 537



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 180/397 (45%), Gaps = 40/397 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F  +   +    +  +A   F +M   G  P + + N  +  L  S R+D A  F ++M
Sbjct: 258 LFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            + ++SP++ T ++ ++   KL  I+ A  V K M  +GF+P+   YNTLI G+C  G +
Sbjct: 318 VKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNI 377

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT------------ 362
           S A+K ++ M   GI PN +T N+LI GFCK  ++ +A  +  EM               
Sbjct: 378 SEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMV 437

Query: 363 -----------------------NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
                                  N+ PN     TL++G  + G       L+  +L  G 
Sbjct: 438 INWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGF 497

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +I+T NALI GLCK G  ++   L++D+ +  LV +  TY+ LI+G C     +  F+
Sbjct: 498 VPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFE 557

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M++ G +P+ + F +L+   C  +  D A+ +  E  +    P+      +  G  
Sbjct: 558 LKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYC 617

Query: 520 HCGKDELAMKLF-----RKMEIRGLLPKGFDKLRTIN 551
              K E    L      +K+E+  ++     +   IN
Sbjct: 618 KANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCIN 654



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 153/308 (49%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S L  + +   A+  +  +      PN+ T N ++H  CK G ++  +++ ++M   G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +    TYNTLISG C +G +    + K  M K GIQP++ TFN L+ G C   K+ EA+
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           R++ E K     PNV TY  +I+GY +    E G +L  E++   ++++ + YN+LI   
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G    A  L  D+    ++ + +TYS+L+ G C     + A  L   M + G  PN 
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  ++  + +    ++   VL EM    + P+    + +  G    GK + A KL  +
Sbjct: 712 VCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE 771

Query: 534 MEIRGLLP 541
           M  +G+LP
Sbjct: 772 MTEKGILP 779



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 158/323 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + +C++   GF+P I + N  +  L  +  +   L   ++M    +  +  T N ++ 
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G ++   E+ + M   G  P + T+N L+ G CN   +  A +  +  +KNG  P
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV T+  +I G+CK  K+ E   + +E+ +  +  N V YN+LI  Y   GN      L 
Sbjct: 605 NVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLR 664

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++M   G+ +   TY++L+ GLC  G    A +L+ ++ K  L+PN   Y+ +I G    
Sbjct: 665 DDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKL 724

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +   + + M      PNK  + +++  FC+      AA++L EM EK + PD++  
Sbjct: 725 GQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTY 784

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
           +   +GL   GK E A K+  +M
Sbjct: 785 NAFTNGLCKEGKVEEAFKVCDEM 807



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 158/334 (47%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +K   A     +M + GF+P     N  +        +  AL    +M    ISPN  TL
Sbjct: 340 EKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTL 399

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  FCK   I +A  V + M   G   +  +++ +I+  C K     A+ F   M  
Sbjct: 400 NSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLL 459

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
             ++PN     TL+ G CK GK  EA  ++  +      PN+VT N LI+G  + GN + 
Sbjct: 460 RNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQE 519

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  +ML  G+  D +TYN LI G CKEGK K+   L +++ K  + P+  T++ L+ 
Sbjct: 520 TLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLH 579

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     + A +L+    ++G  PN + + +++  +C+    +    +L E++ K +  
Sbjct: 580 GLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLEL 639

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +S++ + L       G    A +L   M+ RG+L
Sbjct: 640 NSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVL 673



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 157/341 (46%), Gaps = 53/341 (15%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + ++H L K    + +  +LR +L+         +FD I Y            + L  
Sbjct: 503 TSNALIHGLCKAGNMQETLKLLRDMLER------GLVFDRITY------------NTLIS 544

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K +   +   +M   G  P I + N  L  L +++++D A   + E ++N   P
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVP 604

Query: 262 NVYTLNMVMHAFCKLGIIER-----------------------------------AVEVF 286
           NVYT  +++  +CK   +E                                    A  + 
Sbjct: 605 NVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLR 664

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M+S G + S  TY++L+ G CN GL+  A    + M K G+ PNV+ + T+I G+ K 
Sbjct: 665 DDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKL 724

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G++++ N +  EM + N+ PN  TY  +I+G+ ++G ++  A L  EM   GI  D +TY
Sbjct: 725 GQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTY 784

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           NA   GLCKEGK ++A  +  ++   ++  +  TY+ LI G
Sbjct: 785 NAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 142/302 (47%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R   AL F +EM    + PN   L  ++   CK G    AVE++  +   GF+P++ T N
Sbjct: 446 RFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSN 505

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI G C  G +   +K    M + G+  + IT+NTLI G CK+GK+ E   +  EM   
Sbjct: 506 ALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKK 565

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P++ T+N L++G       +  + L+ E  +NG   ++ TY  +I G CK  K ++ 
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEG 625

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+ +L    L  N+  Y++LI   C+  N   AF+L   M   G   +   +  LM  
Sbjct: 626 ENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHG 685

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C     D A  +L EM ++ + P+ +  + +  G    G+      + ++M    + P 
Sbjct: 686 LCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPN 745

Query: 543 GF 544
            F
Sbjct: 746 KF 747



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 138/289 (47%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +S      +V       +EM +  I P++YT N+++H  C    I+ A  ++   + 
Sbjct: 540 NTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKK 599

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G++P+V TY  +I G+C    +       N +    ++ N + +N+LI  +C  G ++ 
Sbjct: 600 NGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNA 659

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A R+  +MK+  V  +  TY++L++G   +G  +    L +EM + G+  +++ Y  +I 
Sbjct: 660 AFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIG 719

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G  K G+  K   +++++  +++ PN  TY+ +I G C    ++ A +L   M   G  P
Sbjct: 720 GYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILP 779

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +   +    +  C+    + A +V  EM    +  D I  + L  G H 
Sbjct: 780 DAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 111/239 (46%), Gaps = 18/239 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+ +++    K  K +  E++L  ++ S   +L S +++S++ +Y  C +  +       
Sbjct: 608 TYGVMIDGYCKANKVEEGENLLNELV-SKKLELNSVVYNSLIRAY--CINGNM------- 657

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                  FR   D    M+  G L    + +  +  L +   VD A     EMR+  + P
Sbjct: 658 ----NAAFRLRDD----MKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLP 709

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV     ++  + KLG + +   V + M S    P+  TY  +I G C  G    A K  
Sbjct: 710 NVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLL 769

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           N M + GI P+ +T+N    G CK+GK+ EA ++  EM +  V  + +TY TLI+G  Q
Sbjct: 770 NEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDGCHQ 828


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/349 (32%), Positives = 178/349 (51%), Gaps = 3/349 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYK-- 252
           F L+F+ Y        A + F +M D +     + S N  L+ ++       AL FY+  
Sbjct: 102 FILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECG 161

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
              +  ISPNV + N+V+ A CKLG+++RA+EVF+ M      P V TY TL+ G C + 
Sbjct: 162 VGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKED 221

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A+   + M+  G  P+ +TFN LI G CKKG +    ++   M      PN VTYN
Sbjct: 222 RIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYN 281

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T+ING    G  +   SL + M+ +    + +TY  LI GL K+G++    +L+  L++ 
Sbjct: 282 TIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEER 341

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
               N   YS LI+G    + SE A  L+K M+  GC+PN  ++  L+   C+    D A
Sbjct: 342 GHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEA 401

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+L EM+ K   P++   S L  G    G  + A++++++M     +P
Sbjct: 402 KEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVP 450



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 182/389 (46%), Gaps = 13/389 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   D  D    L D +      C  S + F++L      +      T     M 
Sbjct: 212 TLMDGLCKEDRIDEAVLLLDEM--QIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMF 269

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  ++ L    ++D A+     M  ++  PN  T   +++   K G   
Sbjct: 270 LKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSV 329

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             V +  ++E  G   +   Y+TLISG   +     AM     M + G QPN++ ++ LI
Sbjct: 330 DGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALI 389

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GKL EA  I  EM     +PN  TY++LI G+ + GNS+    +++EM +N   
Sbjct: 390 DGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCV 449

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + + Y+ LI GLC++GK ++A  +   +    L P+   YS++I G C   + E   +L
Sbjct: 450 PNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKL 509

Query: 461 YKSMI--RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSEL 514
           +  M+   S  +P+   + +L+   C+      A ++L  ML++   PD    +I L+ L
Sbjct: 510 FNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNAL 569

Query: 515 YSGLH--HCGK---DELAMKLFRKMEIRG 538
              L+    G+   DEL ++L ++  I G
Sbjct: 570 REKLNPPQDGREFLDELVVRLHKRQRIVG 598



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/347 (22%), Positives = 140/347 (40%), Gaps = 60/347 (17%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+      D    L D ++ S   C  + + +  L      + +  +       + 
Sbjct: 282 TIINGLCLKGKLDKAVSLLDRMVAS--KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLE 339

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G      + +  +S L   E+ + A+G +K+M      PN+   + ++   C+ G ++
Sbjct: 340 ERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLD 399

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+   M + G  P+  TY++LI G    G    A++    M KN   PN I ++ LI
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLI 459

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML----- 395
            G C+ GKL EA  +++ M    + P+VV Y+++I+G    G+ E+G  L+ EML     
Sbjct: 460 HGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESD 519

Query: 396 --------------------------------RNGIKVDILTYN---------------- 407
                                             G   D++T N                
Sbjct: 520 SQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDG 579

Query: 408 -----ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
                 L++ L K  +   AA +++ + +  L PNAST+  +I   C
Sbjct: 580 REFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELC 626



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 120/286 (41%), Gaps = 10/286 (3%)

Query: 284 EVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++FK+   MG +    +T+ +LI  + N G      +  + M++   +  V      I  
Sbjct: 49  QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKR---ERRVFIEKNFILV 105

Query: 343 FCKKGKLH---EANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML--R 396
           F   GK H   +A  +F  M         V ++N+++N   Q G        YE  +  +
Sbjct: 106 FRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGK 165

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I  ++L++N +I  +CK G   +A  + +++      P+  TY  L+ G C     + 
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 225

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L   M   GC P+   F +L++  C+  D  R  +++  M  K   P+ +  + + +
Sbjct: 226 AVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIIN 285

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           GL   GK + A+ L  +M     +P        IN   + G    G
Sbjct: 286 GLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDG 331


>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
 gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
          Length = 678

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 214/446 (47%), Gaps = 8/446 (1%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           W  L      LT   V  V+ + +    L LEF+ WV   K    +LE    V+H+L  +
Sbjct: 70  WNFLEKNLASLTNALVSRVVCEFRNTPQLVLEFYNWVGEKKSVLHSLEISCSVIHVLVNS 129

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R++  + S++  ++  +    P ++ +++  SY +C+S+  VFD L +          A 
Sbjct: 130 RRYDDALSLMGNLMTVNGLS-PLEVLEALNNSYGICESNHAVFDALVRACTQIGATVGAC 188

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           +   +++  G    I + N FLS L+    +      YKEM       NV T N+V+HA 
Sbjct: 189 EVIKKLQIEGCWVTIHAWNNFLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHAL 248

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF---KNLMEKNGIQ 330
           CK   ++ A+ VF  +   G  P+V T+N ++ G C  G + LA+K      +M    I+
Sbjct: 249 CKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIK 308

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN +T+N+LI GFCK G +  A  + +EM   ++ PNV TY T+I GY + G  E    L
Sbjct: 309 PNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRL 368

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM+  G+  + + YN+++  L  EG    A+ +  D+    +  +  T S L  G C 
Sbjct: 369 CDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCR 428

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                 A +    ++ +    +     +L++  C++ +F  A ++L  M  + + PD + 
Sbjct: 429 NGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVT 488

Query: 511 LSELYSGLHHC--GKDELAMKLFRKM 534
              L  G  HC  G  E A++++ KM
Sbjct: 489 FGTLIDG--HCKEGNIESAVQVYDKM 512



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 4/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++        K + A   F ++   G  P + + N  +        +D+AL   ++M 
Sbjct: 241 FNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKME 300

Query: 256 ---RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
                 I PN  T N ++  FCK+G I  A E+   M  +   P+V TY T+I G+   G
Sbjct: 301 IMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAG 360

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A++  + M + G+ PN + +N+++     +G +  A+ +F++M    +  +  T +
Sbjct: 361 CLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCS 420

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L  G  + G          ++L N +  D  ++N LI  LCK      A  L+  +   
Sbjct: 421 ILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVR 480

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            LVP+  T+  LI G C   N E A Q+Y  M++   +PN  ++  +++  C++   D  
Sbjct: 481 GLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVD-V 539

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  L+++L++    D+I  + L +G  +CGK + A KL   M+  G+L 
Sbjct: 540 ARSLVDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILA 588



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 149/316 (47%), Gaps = 4/316 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL    EM    + PN    N +MH     G ++ A  VF +M          T + L  
Sbjct: 365 ALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTR 424

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G ++ A+KF N + +N +  +  + N LI   CK      A ++ + M    + P
Sbjct: 425 GLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVP 484

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVT+ TLI+G+ + GN E    +Y++M++   K ++L YN++I GLCK+G    A  LV
Sbjct: 485 DVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLV 544

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L +  LV +  TY+ LI G       ++AF+L   M  +G   +   +  ++   C+ 
Sbjct: 545 DVLQRMGLV-DTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKF 603

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
                A E++  M+   + PD+I    L   ++     E  ++L   M ++G++P   DK
Sbjct: 604 GCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVP---DK 660

Query: 547 LRTINCAPENGEKESG 562
           L   N      ++ES 
Sbjct: 661 LTYENIVSPLLQEESA 676



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 11/312 (3%)

Query: 185 SYRMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE-SCNKFL 235
           + R+CD         + +V++ +            A+  F  M D   +P+ + +C+   
Sbjct: 365 ALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQ-IPLDKFTCSILT 423

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
             L  +  +  AL F  ++  N +  + ++ N++++  CK      A ++   M   G +
Sbjct: 424 RGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLV 483

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P V T+ TLI GHC +G +  A++  + M K   +PN++ +N++I G CK G +  A  +
Sbjct: 484 PDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSL 543

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              ++   +  + +TYNTLINGY   G  +    L   M   GI     TYN +I  LCK
Sbjct: 544 VDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCK 602

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G  ++A  L+  +    ++P+  TY  L+       ++E   +L+  M+  G  P+K  
Sbjct: 603 FGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLT 662

Query: 476 FEMLMSTFCQNE 487
           +E ++S   Q E
Sbjct: 663 YENIVSPLLQEE 674



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 141/301 (46%), Gaps = 1/301 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G LP     N  +  L     VD A   + +M   +I  + +T +++    C+ G
Sbjct: 371 EMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRNG 430

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I  A++    +     I    ++N LI+  C     + A +    M   G+ P+V+TF 
Sbjct: 431 YITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFG 490

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G CK+G +  A +++ +M      PN++ YN++ING  + G  ++  SL + + R 
Sbjct: 491 TLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRM 550

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+ VD +TYN LI G    GK  KA  L   +    ++ +++TY+ +I   C     + A
Sbjct: 551 GL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEA 609

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   M+  G  P+   +  L+    +N   +   E+   M+ K + PD +    + S 
Sbjct: 610 KELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTYENIVSP 669

Query: 518 L 518
           L
Sbjct: 670 L 670


>gi|449474629|ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 229/465 (49%), Gaps = 8/465 (1%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           WK L  LS  LT   V  V+ + +    L+LEF+ WV+     S +LE+   ++H+L  +
Sbjct: 46  WKFLEQLSPSLTNSLVCRVIREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNS 105

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R F  + SI+  ++  +    P ++   ++ SY +C+S+P VF  L +T    +    A 
Sbjct: 106 RNFNDALSIMESLILXNG-KSPLEVLGGLMNSYEICNSNPAVFXALVRTCTQLRSVEGAY 164

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D   ++R  GF   I + N FL+ LL     D     YKEM  +  S NV T N++++A 
Sbjct: 165 DVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYAL 224

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME---KNGIQ 330
           C    +  A+ V   M  +   P+V  +N +I      G + LA+K    +E      + 
Sbjct: 225 CNECKLLEAIYVVYLMLKIEIWPNVVXFNMIIDKANKMGEMDLALKLTRNIEVISGGSVS 284

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN++ +N +I GFCK  +L  A  +  EM    +  N  TY TLI+GY + G+ ++   L
Sbjct: 285 PNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAFRL 344

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM+   +  D   YN+LI  L  EG+ ++A++L+ D+    ++P+  TYS L  G CV
Sbjct: 345 CDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCV 404

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             +  +A +++  ++      +   + +L++   Q+ +   A ++L  M+   + PD + 
Sbjct: 405 SGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVT 464

Query: 511 LSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
                 G  HC  GK E A++++ K  +   +  G  K  +I  A
Sbjct: 465 YGTPVDG--HCKEGKIEAAVQIYDKAVVYNSILDGLCKQGSIYAA 507



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 151/345 (43%), Gaps = 64/345 (18%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +SPN+   N +++ FCK+  +E A  V   M  +G   +  TY TLI G+  KG L +A 
Sbjct: 283 VSPNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIDFNERTYATLIDGYARKGSLDVAF 342

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN----------- 367
           +  + M +  + P+   +N+LI+    +G+L EA+ + S+M    + P+           
Sbjct: 343 RLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGL 402

Query: 368 ------------------------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
                                     TYN LIN   Q  N      L   M+  GIK D+
Sbjct: 403 CVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDM 462

Query: 404 LTY--------------------------NALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +TY                          N+++ GLCK+G    A  LV  L +N  + +
Sbjct: 463 VTYGTPVDGHCKEGKIEAAVQIYDKAVVYNSILDGLCKQGSIYAAKLLVDKLQQNGFL-D 521

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ L+ G CV    E+AF L+  MI  G   N   + ++++  C+     +A E++ 
Sbjct: 522 PVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLIQQAMELMR 581

Query: 498 EMLEKCMAPDSIILSELYSG-LHHCGKDELAMKLFRKMEIRGLLP 541
            M  + + PD I  + L +  +  CG +++ ++L   M ++G +P
Sbjct: 582 AMSSQGIIPDLITYTTLITNFVETCGSEDV-IELHGYMMLKGAVP 625



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 158/335 (47%), Gaps = 13/335 (3%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  +++ G     S D+  +L D ++    + D+   V++ L        +   A+   
Sbjct: 323 RTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDT--FVYNSLIYWLYMEGELEEASFLL 380

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M +   LP   + +     L  S  ++ AL  +  +    +  + +T N++++   + 
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQS 440

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             I  A ++  +M   G  P + TY T + GHC +G +  A++         I    + +
Sbjct: 441 RNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQ---------IYDKAVVY 491

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N+++ G CK+G ++ A  +  +++  N   + VTYNTL++G+   G  E   +L+ EM+ 
Sbjct: 492 NSILDGLCKQGSIYAAKLLVDKLQ-QNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMIN 550

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G  V+I++YN +I  LCK G  ++A  L++ +    ++P+  TY+ LIT       SE 
Sbjct: 551 VGSLVNIVSYNIMINFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVETCGSED 610

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             +L+  M+  G  P++  +   +S  C  E  +R
Sbjct: 611 VIELHGYMMLKGAVPDRKTYRSFVSP-CLQEHTER 644


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/355 (31%), Positives = 181/355 (50%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   +  L    +   K   A   + +M   G +P   + N  ++ L    R   
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 391

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  +  M  +    N  T N ++   C  G IE+A+ +F+ M  MG +P+V TYNTLI+
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+  KG ++ A +  +LM++NG +P+  T+N L+ GF K GKL  A+  F EM    ++P
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V+Y  LI+G+ + G  ++  SL + M   G   ++ +YNA+I GL KE +  +A  + 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L+PN  TY+ LI G C    ++ AF+++  M +  C PN + +  L+   CQ 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              D A  +L EM  K +APD +  + L  G    G+ + A  L R+M   G  P
Sbjct: 632 GKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKP 686



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 24/427 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDL 174
           +PS LT  T   +++IL+K  K + +E IL  I   D                   + DL
Sbjct: 195 QPSLLTFNT---LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
              +FD ++     CD + + +  L     +  +   A D   +M + G  P + +    
Sbjct: 252 AFGVFDRMVK--EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +++L   E  + A+     M++    PNV T   ++    +LG +E A+ ++  M   G 
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN LI+  C  G  S A+K  + ME +G   N  T+N +I G C  G + +A  
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F +M      P VVTYNTLINGY   GN    A L + M  NG + D  TYN L+ G  
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K GK + A++  +++ +  L PN  +Y+ALI G       + A  L K M   GC PN  
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  +++   +   F  A ++  +M+E+ + P+ I  + L  GL   G+ + A K+F  M
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609

Query: 535 EIRGLLP 541
           E R  LP
Sbjct: 610 EKRKCLP 616



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 212/511 (41%), Gaps = 70/511 (13%)

Query: 68  HRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLE 125
           H  +P  +      V+   + L    WK  + L       +  HV  ++ V KD    ++
Sbjct: 34  HFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQ 93

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           FF W+         +     +L+ L ++R F  ++ I                       
Sbjct: 94  FFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI----------------------- 130

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
            R+         L+ K   + ++ R   D   ++   GF   + SCN  L  L   E V+
Sbjct: 131 -RI---------LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   YK+M  + I P++ T N +++   K G +  A  +   +      P V TY +LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE------- 358
            GHC    L LA    + M K G  PN +T++TLI G C +G++ EA  +  E       
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 359 ----------------------------MKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
                                       MK     PNV TY  LI+G  ++G  E+   L
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y +ML+ G+  + +TYNALI  LC  G+   A  +   ++ +  + N  TY+ +I G C+
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             + E+A  L++ M++ G  P    +  L++ +    + + AA +L  M E    PD   
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +EL SG    GK E A   F++M   GL P
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNP 511



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 142/265 (53%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M   G LP + + N  ++  L    V+ A      M+ N   P+ +T N ++  F K
Sbjct: 431 FEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +E A   F+ M   G  P+  +Y  LI GH   G + +A+     ME+ G  PNV +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N +I G  K+ +  EA +I  +M    + PNV+TY TLI+G  + G ++    ++ +M 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           +     ++ TY++LI GLC+EGK  +A  L+K++++  L P+  T+++LI G  V    +
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLM 480
            AF L + M+  GC+PN   + +L+
Sbjct: 671 HAFLLLRRMVDMGCKPNYRTYSVLL 695



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 169/361 (46%), Gaps = 24/361 (6%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           L V   +  +L+ F W++ H   + T                 ++   I++G+      +
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANT-----------------QTYNEIIKGLCLGGDIE 425

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF+ +L    +   + + ++ L   Y  +    NA      M++ G  P   + N+
Sbjct: 426 KAMVLFEKMLKMGPL--PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S      +++ A  +++EM    ++PN  +   ++    K G ++ A+ + K ME MG
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V +YN +I+G   +   S A K  + M + G+ PNVIT+ TLI G C+ G+   A 
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           +IF +M+     PN+ TY++LI G  Q G ++    L +EM R G+  D +T+ +LI G 
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGF 663

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG---QCVRKNSERAFQLYKSMIRSGCR 470
              G+   A  L++ +      PN  TYS L+ G   +C+    E+ F L  +    GC 
Sbjct: 664 VVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLL-EEKIFPLVDNYFL-GCN 721

Query: 471 P 471
           P
Sbjct: 722 P 722


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 1/352 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERVDIA 247
           C  S +  +++   +    +  +A +   +M +  GF P   + N  ++ L  +  V  A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +     M +    P+VYT N V+   CKLG ++ AVEV   M +    P+  TYNTLIS 
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C +  +  A +   ++   GI P+V TFN+LI G C       A  +F EM++    P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             TYN LI+     G  +   ++ ++M  +G    ++TYN LI G CK  KT++A  +  
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +++ + +  N+ TY+ LI G C  +  E A QL   MI  G +P+K+ +  L++ FC+  
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           D  +AA+++  M      PD +    L SGL   G+ E+A KL R ++++G+
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/316 (33%), Positives = 156/316 (49%), Gaps = 1/316 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A +   QM      P   + N  +S+L    +V+ A    + +    I P+V T N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   C       A+E+F+ M S G  P   TYN LI   C+KG L  A+     ME +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G   +VIT+NTLI GFCK  K  EA  IF EM+   VS N VTYNTLI+G  +    E  
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           A L ++M+  G K D  TYN+L+   C+ G  KKAA +V+ +  N   P+  TY  LI+G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-P 506
            C     E A +L +S+   G     H +  ++    +      A  +  EMLE+  A P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644

Query: 507 DSIILSELYSGLHHCG 522
           D++    ++ GL + G
Sbjct: 645 DAVSYRIVFRGLCNGG 660



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 169/346 (48%), Gaps = 2/346 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + ++ L  T     +   AT+    +   G LP + + N  +  L  +    +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EMR     P+ +T NM++ + C  G ++ A+ + K ME  G   SV TYNTLI 
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C       A +  + ME +G+  N +T+NTLI G CK  ++ +A ++  +M      P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TYN+L+  + + G+ +  A + + M  NG + DI+TY  LI GLCK G+ + A+ L+
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI-FEMLMSTFCQ 485
           + +    +      Y+ +I G   ++ +  A  L++ M+     P   + + ++    C 
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658

Query: 486 NEDFDR-AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
                R A + L+E+LEK   P+   L  L  GL     +E  +KL
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 168/339 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L          ++A +    M   G+ P + + N  +S L     V  A+    +M 
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SPN  T N ++   CK   +E A E+ + + S G +P V T+N+LI G C      
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +AM+    M   G +P+  T+N LI   C KGKL EA  +  +M+ +  + +V+TYNTLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ +   +     +++EM  +G+  + +TYN LI GLCK  + + AA L+  +      
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++L+T  C   + ++A  + ++M  +GC P+   +  L+S  C+    + A+++
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L  +  K +       + +  GL    K   A+ LFR+M
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 25/349 (7%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKF---------LSSLLDSERVDIALGFYKEMRR 256
           +K   +   + C+M    FL +IES  +F         +  ++D   +     FY  M  
Sbjct: 103 KKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN 162

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             +  N   L  + HA                M   G  P V+T+N LI   C    L  
Sbjct: 163 LLVDGNSLKLVEISHA---------------KMSVWGIKPDVSTFNVLIKALCRAHQLRP 207

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+     M   G+ P+  TF T++ G+ ++G L  A RI  +M     S + V+ N +++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267

Query: 377 GYGQVGNSEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           G+ + G  E   +  +EM  ++G   D  T+N L+ GLCK G  K A  ++  + +    
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+++I+G C     + A ++   MI   C PN   +  L+ST C+    + A E+
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              +  K + PD    + L  GL       +AM+LF +M  +G  P  F
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/269 (20%), Positives = 106/269 (39%), Gaps = 43/269 (15%)

Query: 315 SLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           S A++  NL  K     P    +  ++    + G   +  +I  +MK++       T+  
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123

Query: 374 LINGYGQVGNSEMGASLYEEMLRN------------------------------------ 397
           LI  Y Q    +   S+ + M+                                      
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIK D+ T+N LI  LC+  + + A  +++D+    LVP+  T++ ++ G     + + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML-EKCMAPDSIILSELYS 516
            ++ + M+  GC  +     +++  FC+    + A   + EM  +    PD    + L +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           GL   G  + A+++   M     L +G+D
Sbjct: 304 GLCKAGHVKHAIEIMDVM-----LQEGYD 327


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 183/364 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   +    +   A      MR+ G  P + + N  ++ L  + R++ A 
Sbjct: 186 CAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDAR 245

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM R  ++P+  + N ++  +CK G +  A+ VF  M   G +P V T+ +LI   
Sbjct: 246 KMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAM 305

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A+     M + G++ N  TF  LI GFC+ G L +A     EM+   + P+V
Sbjct: 306 CRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSV 365

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V YN LINGY ++G  +    L  EM   G+K D++TY+ ++ G CK G T  A  L + 
Sbjct: 366 VCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRK 425

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  +VP+A TYS+LI G C  +    A +L++ M++ G +P++  +  L+   C+  +
Sbjct: 426 MLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN 485

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
             +A  +  EM++K + PD +  S L  GL    + + A +L  K+     +P       
Sbjct: 486 VQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEA 545

Query: 549 TINC 552
            ++C
Sbjct: 546 LMHC 549



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 178/320 (55%), Gaps = 2/320 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P + + N  L +L D+  +  A      M R+ ++PNVYT N+++ A C  G  E A
Sbjct: 115 GYAPSLLAYNAVLLALSDAS-LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 283 VEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           + V   +M   G  P+V TYNTL++  C  G +  A +   +M + G++P+++TFNT++ 
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK G++ +A ++F EM    ++P+ V+YNTL++GY + G      +++ EM + G+  
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++T+ +LI  +C+ G  ++A  LV  + +  L  N  T++ALI G C     + A    
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M     +P+   + +L++ +C+    D A E++ EM  K M PD +  S + SG    
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A +L RKM  +G++P
Sbjct: 414 GDTDSAFELNRKMLKKGVVP 433



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/329 (33%), Positives = 178/329 (54%), Gaps = 6/329 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFY-KEMRRNRISPNVYTLNMVMHAFCKLG 277
           +RD G  P + + N  + +L    + + ALG    +MR    +PNV T N ++ AFC+ G
Sbjct: 146 LRD-GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAG 204

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A  +   M   G  PS+ T+NT+++G C  G +  A K  + M + G+ P+ +++N
Sbjct: 205 EVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYN 264

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ G+CK G LHEA  +F+EM    V P+VVT+ +LI+   + GN E   +L  +M   
Sbjct: 265 TLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRER 324

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++++  T+ ALI G C+ G    A   +K++ +  + P+   Y+ LI G C     + A
Sbjct: 325 GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEA 384

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   M   G +P+   +  ++S +C+  D D A E+  +ML+K + PD+I  S L  G
Sbjct: 385 RELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRG 444

Query: 518 LHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
           L  C +  L  A +LF KM   GL P  F
Sbjct: 445 L--CEERRLGDACELFEKMLQLGLQPDEF 471



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 166/370 (44%), Gaps = 60/370 (16%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLDS----ERVDIAL 248
           + F  L            A     QMR+ G        N+F  ++L+D       +D AL
Sbjct: 296 VTFTSLIHAMCRAGNLERAVALVGQMRERGL-----RMNEFTFTALIDGFCRNGFLDDAL 350

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEMR  RI P+V   N++++ +CKLG ++ A E+   ME+ G  P V TY+T++SG+
Sbjct: 351 LAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGY 410

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G    A +    M K G+ P+ IT+++LI G C++ +L +A  +F +M    + P+ 
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDE 470

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY TLI+G+ + GN +   SL++EM++ G+  D++TY+ LI GL K  +TK+A  L+  
Sbjct: 471 FTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFK 530

Query: 429 LDKNSLVPN--------------------------------------------------A 438
           L     VP+                                                   
Sbjct: 531 LYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDG 590

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S YS LI G C   N  +A   +K ++R G  PN      L+    +      A  V+ E
Sbjct: 591 SVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQE 650

Query: 499 MLEKCMAPDS 508
           +L  C   D+
Sbjct: 651 LLNCCSLADA 660



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 130/297 (43%), Gaps = 19/297 (6%)

Query: 170 DSFDLPSKLFDSILY--SYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D F     L D++L     R C   P V  +++L   Y    +   A +   +M   G  
Sbjct: 338 DGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMK 397

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + +  LS        D A    ++M +  + P+  T + ++   C+   +  A E+
Sbjct: 398 PDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACEL 457

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F+ M  +G  P   TY TLI GHC +G +  A+   + M K G+ P+V+T++ LI G  K
Sbjct: 458 FEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSK 517

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLIN---------------GYGQVGNSEMGASL 390
             +  EA R+  ++   +  P+ + Y  L++               G+   G       +
Sbjct: 518 SARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLMNQADKV 577

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           Y+ ML    K+D   Y+ LI G C+ G   KA    K L +    PN+++  +L+ G
Sbjct: 578 YQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRG 634



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 49/243 (20%), Positives = 92/243 (37%), Gaps = 50/243 (20%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P   + +  +  L +  R+  A   +++M +  + P+ +T   ++   CK G
Sbjct: 425 KMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEG 484

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISG------------------------------ 307
            +++A+ +   M   G +P V TY+ LI G                              
Sbjct: 485 NVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYE 544

Query: 308 ---HCN-----------------KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
              HC                  KGL++ A K    M     + +   ++ LI G C+ G
Sbjct: 545 ALMHCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGG 604

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            + +A     ++     SPN  +  +L+ G  + G +    ++ +E+L      D  T  
Sbjct: 605 NIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSK 664

Query: 408 ALI 410
           ALI
Sbjct: 665 ALI 667


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 7/381 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +LR +L S   +   +  + +L    +CD S   F++         +  +A   F  MR 
Sbjct: 22  LLRSLLKSGKIEKAHRFVEQLLVK-GLCDIS--TFNIYISGLCRASRIGDAQTVFDGMRK 78

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +GF P   + N  LS L +  R+  A   Y+ M +   SP+V T N ++H FCK+G ++ 
Sbjct: 79  HGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDE 138

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++F      GF+P V TYN LI+G C    L  A +    M    + P+V+T+N+L+ 
Sbjct: 139 ALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVN 198

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG-QVGNSEMGASLYEEMLRNGIK 400
           G CK G++ EA  +  +      SPNV+TY+TLI+G   ++   E    L E+M+ NG K
Sbjct: 199 GLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCK 255

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI++YNALI GL +E    +A  L   + +    P   TY+ LI G         AF+L
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFEL 315

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +++ G  P+   + + +   C+    + A  +L +M EK   PD +  + + +GL  
Sbjct: 316 FSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCK 375

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
             + + A  L   ME +G  P
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSP 396



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 175/347 (50%), Gaps = 3/347 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L    A  +    A   F  +   G+ P + + N  +  LL  +RV+ A 
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  + ++ + P+  T  + +   CK G +E A+ + K+M+  G +P V ++N +I+G 
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A    + ME  G  PN I+FNTLI G C+ GK  +A   F EM    V P V
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433

Query: 369 VTYNTLINGYG---QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           VTYN L++G     Q G  +   +L++ M+  G   D++TY+ALI GL K GK   A  L
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  ++    +PN  TY++LI+G C     + A +L+ +M+  GC P+   +  ++S  C+
Sbjct: 494 LGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCK 553

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            E  D+A  +    LE  + P S +   L  GL    + + A+KL +
Sbjct: 554 QEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 166/338 (49%), Gaps = 3/338 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++  +A     +M   G  P I S N  +  L   + V  AL  +  + R    P V T 
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++    K   +  A E+F  +   G  P   TY   I G C  G +  A+     M++
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P+V++ N +I G CK+ ++ EA  + S M+A   SPN +++NTLI G  + G  + 
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCK---EGKTKKAAYLVKDLDKNSLVPNASTYSA 443
             + ++EML+ G+K  ++TYN L+ GLCK   EG+ K+A  L   + +   VP+  TYSA
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G       + A +L  +M   GC PN + +  L+S  C  +  D A E+ + M+EK 
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             PD+I    + S L      + A+ LF      G++P
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVP 574



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 183/385 (47%), Gaps = 9/385 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G       D   K+FD  +    + D   + ++ L   +    K   A     +M 
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDV--VTYNALINGFCKADKLDEAQRILQRMV 182

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-LGII 279
               +P + + N  ++ L  + RVD A     +      SPNV T + ++   C+ L  +
Sbjct: 183 SESLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRL 239

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A ++ + M   G  P + +YN LI G   +  +S A+K    + + G +P V T+N L
Sbjct: 240 ESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL 299

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G  K+ +++EA  +FS +    + P+ +TY   I+G  + G  E    + ++M   G 
Sbjct: 300 IDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGC 359

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D++++NA+I GLCKE +  +A  L+  ++     PNA +++ LI GQC     ++A  
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL---EMLEKCMAPDSIILSELYS 516
            +K M++ G +P    + +L+   C+     R  E +     M+EK   PD +  S L  
Sbjct: 420 TFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALID 479

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   GK + A +L   ME +G +P
Sbjct: 480 GLGKAGKLDDARRLLGAMEAKGCIP 504



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 152/317 (47%), Gaps = 38/317 (11%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERA---VE-------------------------------V 285
           SP+ YT+ +++ +  K G IE+A   VE                               V
Sbjct: 13  SPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   GF P+  TYN L+SG CN G +S A      M K G  P+V+T+NTL+ GFCK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GKL EA +IF         P+VVTYN LING+ +    +    + + M+   +  D++T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR-KNSERAFQLYKSM 464
           YN+L+ GLCK G+  +A  L+ D       PN  TYS LI+G C   +  E A QL + M
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           + +GC+P+   +  L+    + +    A ++   +L +   P+    + L  GL    + 
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 525 ELAMKLFRKMEIRGLLP 541
             A +LF  +   GL P
Sbjct: 310 NEAFELFSGLVKHGLEP 326



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 5/304 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+L  D  +   +LF  ++      D+  + + +         +  +A      M +
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDA--ITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + S N  ++ L   +RVD A      M     SPN  + N ++   C+ G  ++
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHC---NKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           A+  FK M   G  P+V TYN L+ G C    +G +  A+   + M + G  P+V+T++ 
Sbjct: 417 AMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSA 476

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G  K GKL +A R+   M+A    PNV TYN+LI+G   +   +    L+  M+  G
Sbjct: 477 LIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D +TY  +I  LCK+    KA  L     +  +VP +  Y +LI G C     + A 
Sbjct: 537 CVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596

Query: 459 QLYK 462
           +L +
Sbjct: 597 KLLQ 600


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 199/416 (47%), Gaps = 17/416 (4%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLF--------DSILYSYRM-- 188
           ++ V++ L K+     +E+I++ + +S    D+F   S +         DS L  +    
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 189 ---CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
              C+ + + +  L        +   A D   +M  +G LP   +C   + +L D    +
Sbjct: 448 KEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYE 507

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   + +M+     PNVYT   ++   C  G+++ A+ +F  M   G  P+  TYN LI
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALI 567

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +       +  A    NLM +NG+  N++T+N +I G+C  G   +A  + + M     S
Sbjct: 568 NILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS 627

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            N+VTYNT+I GY   GN+     + + M   G K D  +Y  LI G CK  K + A  L
Sbjct: 628 ANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGL 687

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++  + L PN  TY+ALI G C  +  + A  L + M RSGCRPN   + +L+    +
Sbjct: 688 FNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTK 747

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +F  A E+   M+E+ + P+ +  + +  GL   G   LA+++F KM  +G LP
Sbjct: 748 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 803



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 168/353 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L          + A   F +M   G  P   + N  ++ L+++ R+  A 
Sbjct: 521 CEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAF 580

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M RN +  N+ T N ++  +C LG  ++A+ V  NM   G   ++ TYNT+I G+
Sbjct: 581 VVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGY 640

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G  + A++  +LM   G +P+  ++  LI GFCK  K+  A  +F+EM    + PN 
Sbjct: 641 CDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNE 700

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+GY +    +   SL E M R+G + ++ TYN LI GL K+     A  L K 
Sbjct: 701 VTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKV 760

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + PN  TY+A+I G C   ++  A +++  MI  GC PN   +  L+    Q   
Sbjct: 761 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGK 820

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A  +  E+    + PD I   ++       GK E A     +M   G  P
Sbjct: 821 VEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQP 873



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 159/339 (46%), Gaps = 18/339 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ +++IL +NR+ K +  +L       +    + LF +I+            ++ + K
Sbjct: 562 TYNALINILVENRRIKYAFVVL-------NLMGRNGLFTNIV-----------TYNEMIK 603

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      + A      M   G    + + N  +    DS     AL     MR     P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + ++   ++  FCK+  +E A  +F  M   G  P+  TY  LI G+C    L  A    
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+++G +PNV T+N LI G  K+     A  +   M    + PNVVTY  +I+G  + 
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++ +   ++ +M+  G   ++LTY++LI  L +EGK ++A  L  +L+++ L+P+  TY
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             +I    +    E AF     MI++GC+P    + +L+
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLI 882



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 156/328 (47%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D + +M   G  P +   N  +++L     V  A    K++  + +SP+ +T   ++   
Sbjct: 371 DRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGH 430

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+   ++ A++VF  M   G  P+  TY+TLI+G C+ G ++ A      M  +GI P  
Sbjct: 431 CRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTA 490

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T    I   C  G   +A R+F +MK     PNV TY  LI+G    G  ++   L+  
Sbjct: 491 HTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHR 550

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R+G+  + +TYNALI  L +  + K A  ++  + +N L  N  TY+ +I G C+  +
Sbjct: 551 MSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGD 610

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++A  +  +M++ G   N   +  ++  +C + +   A  +L  M +    PD    +E
Sbjct: 611 PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTE 670

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G     K E A  LF +M   GL P
Sbjct: 671 LICGFCKISKMESAFGLFNEMVDDGLCP 698



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 179/440 (40%), Gaps = 61/440 (13%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +I++G  DS +     ++ D  L     C      +  L   +    K  +A   F +M 
Sbjct: 635  TIIKGYCDSGNTTSALRILD--LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            D G  P   +    +      E++D A    + M+R+   PNV T N+++H   K     
Sbjct: 693  DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             A E+ K M   G  P+V TY  +I G C  G  SLA++  N M + G  PN++T+++LI
Sbjct: 753  GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                ++GK+ EA  +F+E++   + P+ +TY  +I  Y   G  E   +    M++ G +
Sbjct: 813  RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872

Query: 401  VDILTYNALILGLCKE---GKTKKAA-----------YLVKDLD---------------- 430
              + TY  LI GL  E      + AA           Y   D D                
Sbjct: 873  PTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGL 932

Query: 431  ----KNSLVPNAST-------------------------YSALITGQCVRKNSERAFQLY 461
                +N+LV N ST                         Y++L+      +N + A  ++
Sbjct: 933  SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVF 992

Query: 462  KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            K M   GC  + + ++ L+   CQ      A      ML +   PD ++ + L  GL   
Sbjct: 993  KHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRD 1052

Query: 522  GKDELAMKLFRKMEIRGLLP 541
            G  +L M+    ME R  +P
Sbjct: 1053 GYKDLCMEFLHIMETRRYMP 1072



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 157/371 (42%), Gaps = 28/371 (7%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K Y       +A      MRD G  P   S  + +       +++ A G + E
Sbjct: 631 VTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNE 690

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + PN  T   ++  +CK   ++ A  + ++M+  G  P+V TYN LI G   +  
Sbjct: 691 MVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNN 750

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S A +   +M + GI PNV+T+  +I G CK G    A  +F++M      PN++TY++
Sbjct: 751 FSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSS 810

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI   GQ G  E   +L+ E+ R+G+  D +TY  +I      GK + A   +  + K  
Sbjct: 811 LIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870

Query: 434 LVPNASTYSALITG--------------------------QCVRKNSERAFQLYKSMIRS 467
             P   TY  LI G                          Q   +++        + +  
Sbjct: 871 CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDP 930

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   +  +   L+S       +  A E+L  M+ + + PD    + L   L      +LA
Sbjct: 931 GL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLA 988

Query: 528 MKLFRKMEIRG 538
           M +F+ M  +G
Sbjct: 989 MGVFKHMSTQG 999



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 141/312 (45%), Gaps = 7/312 (2%)

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           +I+SC+         E +   + F   + ++ +   ++  + ++    +LG+    ++ +
Sbjct: 321 LIKSCHS-------KEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRY 373

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S G  P++  YN +I+  C  G ++ A      + ++ + P+  T+ ++I G C+K
Sbjct: 374 HRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRK 433

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             L  A ++F++M      PN VTY+TLING    G       L  EM+ +GI     T 
Sbjct: 434 HDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTC 493

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
              I+ LC  G  + A  L  D+      PN  TY+ALI+G CV    + A  L+  M R
Sbjct: 494 TGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR 553

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L++   +N     A  VL  M    +  + +  +E+  G    G  + 
Sbjct: 554 DGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKK 613

Query: 527 AMKLFRKMEIRG 538
           AM +   M  RG
Sbjct: 614 AMLVMNNMLQRG 625



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 112/253 (44%)

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI    +K  ++  M F +++ ++G++  +  ++ L+    + G        +  M +  
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN++ YN +IN   + GN     ++ +++  + +  D  TY ++ILG C++     A 
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + K    PN  TYS LI G C       AF L + MI  G  P  H     +   
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C    ++ A  + ++M  K   P+    + L SGL   G  ++A+ LF +M   G+ P  
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 544 FDKLRTINCAPEN 556
                 IN   EN
Sbjct: 561 VTYNALINILVEN 573



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/368 (19%), Positives = 144/368 (39%), Gaps = 50/368 (13%)

Query: 140  LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
            ++T+++++H LTK   F  +E + + +++   F                   + + +  +
Sbjct: 735  VQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIF------------------PNVVTYTAM 776

Query: 200  FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                        A + F +M + G LP + + +  + +L    +V+ A   + E+ R+ +
Sbjct: 777  IDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGL 836

Query: 260  SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             P+  T   ++ A+   G +E A      M   G  P++ TY  LI G  N+ LL+    
Sbjct: 837  IPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA---- 892

Query: 320  FKNLMEKNGIQPN----------------------------VITFNTLIFGFCKKGKLHE 351
             + L     + PN                            V   N L+      G+  E
Sbjct: 893  DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 952

Query: 352  ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            AN +   M +  + P+   YN+L+    +V N ++   +++ M   G +V +  Y  LI 
Sbjct: 953  ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012

Query: 412  GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             LC+  + K+A    +++   +  P+    + LI G       +   +    M      P
Sbjct: 1013 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMP 1072

Query: 472  NKHIFEML 479
            + HI+ +L
Sbjct: 1073 SFHIYTIL 1080


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 194/372 (52%), Gaps = 3/372 (0%)

Query: 175 PSKLFDSILYSYRMCDSSP-LVFDLLFKTYAH-RKKFRNATDTFCQMRDYGFLPIIESCN 232
           P  L    L + R+  SSP   FD L K+YA    +   A       R  G++P + + N
Sbjct: 61  PLPLLVCFLRALRLLPSSPPRPFDSLIKSYASLPNRASLAAAALAFARSAGYVPSVLAYN 120

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             L +L D+     A  F+  M  + ++PNVYT N+++ A C  G  + A+ + ++M   
Sbjct: 121 AVLLALSDASLTS-ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGA 179

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P+V TYNTL++     G +  A +   +M   G++PN++TFN+++ G CK GK+ +A
Sbjct: 180 GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDA 239

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++F EM    ++P+ V+YNTL+ GY + G S    S++ EM + GI  D++T+ +LI  
Sbjct: 240 RKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHV 299

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +CK G  + A  LV+ + +  L  N  T++ALI G C +   + A    + M +   +P+
Sbjct: 300 MCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPS 359

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L++ +C     D A E+L EM  K + PD +  S + S          A +L +
Sbjct: 360 VVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 419

Query: 533 KMEIRGLLPKGF 544
           +M  +G+LP   
Sbjct: 420 QMLEKGVLPDAI 431



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 176/356 (49%), Gaps = 2/356 (0%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           SIL   R     P  + ++ L   +    +   A      M D G  P + + N  ++ +
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             + +++ A   + EM R  ++P+  + N ++  +CK G    A+ VF  M   G +P V
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            T+ +LI   C  G L  A+     M + G+Q N +TF  LI GFCKKG L +A      
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M+   + P+VV YN LINGY  VG  +    L  EM   G+K D++TY+ +I   CK   
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           T  A  L + + +  ++P+A TYS+LI   C  K    A  L+K+MI+ G +P++  +  
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L+   C+  + +RA  +  +M++  + PD +  S L +GL    +   A +L  K+
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 180/414 (43%), Gaps = 50/414 (12%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ +        K  +A   F +M   G  P   S N  +     +     AL  + E
Sbjct: 221 VTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAE 280

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+V T   ++H  CK G +E AV + + M   G   +  T+  LI G C KG 
Sbjct: 281 MTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 340

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M +  I+P+V+ +N LI G+C  G++ EA  +  EM+A  + P+VVTY+T
Sbjct: 341 LDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+ Y +  ++     L ++ML  G+  D +TY++LI  LC+E +   A  L K++ K  
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN--------------------- 472
           L P+  TY++LI G C   N ERA  L+  M+++G  P+                     
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520

Query: 473 KHIFEM-----------------------------LMSTFCQNEDFDRAAEVLLEMLEKC 503
           + +F++                             L+  FC     + A +V   ML++ 
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
              D  + S L  G    G    A+   ++M  RG  P     +  I    ENG
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENG 634



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 164/375 (43%), Gaps = 59/375 (15%)

Query: 218 QMRDYGFLPIIES-CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           QM +  F  +I+  C K          +D AL   + MR+ RI P+V   N +++ +C +
Sbjct: 322 QMNEVTFTALIDGFCKKGF--------LDDALLAVRGMRQCRIKPSVVCYNALINGYCMV 373

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A E+   ME+ G  P V TY+T+IS +C       A +    M + G+ P+ IT+
Sbjct: 374 GRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITY 433

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++LI   C++ +L +A+ +F  M    + P+  TY +LI+G+ + GN E   SL+++M++
Sbjct: 434 SSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVK 493

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP-------------------- 436
            G+  D++TY+ LI GL K  +  +A  L+  L     +P                    
Sbjct: 494 AGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSV 553

Query: 437 ------------------------------NASTYSALITGQCVRKNSERAFQLYKSMIR 466
                                         + S YS LI G C   N  +A   +K M++
Sbjct: 554 LALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQ 613

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN      L+    +N     A +V+ ++L  C   D+     L     + G  + 
Sbjct: 614 RGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDA 673

Query: 527 AMKLFRKMEIRGLLP 541
            + +   M   GLLP
Sbjct: 674 VLDVLHGMAKDGLLP 688



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/357 (22%), Positives = 143/357 (40%), Gaps = 54/357 (15%)

Query: 170 DSFDLPSKLFDSILY--SYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D F     L D++L     R C   P V  ++ L   Y    +   A +   +M   G  
Sbjct: 333 DGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 392

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + +  +S+   +     A    ++M    + P+  T + ++   C+   +  A  +
Sbjct: 393 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVL 452

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG--- 342
           FKNM  +G  P   TY +LI GHC +G +  A+   + M K G+ P+V+T++ LI G   
Sbjct: 453 FKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSK 512

Query: 343 -----------------------------------------------FCKKGKLHEANRI 355
                                                          FC KG ++EA+++
Sbjct: 513 SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKV 572

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +  M   N + +   Y+ LI+G+ + GN     S +++ML+ G   +  +  +LI GL +
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            G   +A  +++ L     + +A    ALI       N +    +   M + G  P+
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/337 (31%), Positives = 183/337 (54%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H     +A  +F +M      P I    K L+S+   +     L   K+M    I P+VY
Sbjct: 33  HFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVY 92

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           TL +V+++FC L  ++ A+ V   +  +G  P   T+ TL+ G C  G +  A+   + M
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G QPNV+T+ TL+ G CK  +L EA  +FSEM A  +SP++ TYN+LI+    +   
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +   +L  EM+++ I  ++++ N ++  LCKEGK  +A  +V  + +  + P+  TY+AL
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G C+R   + A +++  M+R+GC  N   +  L++ +C+ +  D+A  +  EM  + +
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P+++  S L  GL H G+ + A+ LF +M   G +P
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIP 369



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 170/348 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L +      K   A D F +M   GF P + +    ++ L    ++  AL  + EM 
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ISP+++T N ++HA C L   +    +   M     +P+V + N ++   C +G ++
Sbjct: 189 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 248

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    ++M + G++P+V+T+  L+ G C + ++ EA ++F  M       NVV+YNTLI
Sbjct: 249 EAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLI 308

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++   +    L+EEM R  +  + +TY+ LI GLC  G+ + A  L  ++     +
Sbjct: 309 NGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQI 368

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TYS L+   C       A  L K++  S   P+  ++ + +   C+  D + A ++
Sbjct: 369 PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDL 428

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
              +  + + PD    + +  GL   G  + A KLFR+M+  G L  G
Sbjct: 429 FSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNG 476



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 174/345 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L       ++   A + F +M   G  P I + N  + +L +            E
Sbjct: 162 VTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 221

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +++I PNV +LN+V+ A CK G +  A +V   M   G  P V TY  L+ GHC +  
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSE 281

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  ++M +NG   NV+++NTLI G+CK  ++ +A  +F EM    + PN +TY+T
Sbjct: 282 MDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYST 341

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G   VG  +   +L+ EM+  G   +++TY+ L+  LCK  +  +A  L+K ++ ++
Sbjct: 342 LIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSN 401

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+   Y+  I G C   + E A  L+ ++   G +P+     +++   C+    D A+
Sbjct: 402 LDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEAS 461

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  EM E     +    + +  GL    K   A++L  +M  RG
Sbjct: 462 KLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 172/386 (44%), Gaps = 37/386 (9%)

Query: 193 PLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           P +F+   L  + A  K +        +M  +G  P + +    ++S     RVD AL  
Sbjct: 54  PPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSV 113

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++ +    P+  T   ++   C +G I  A++VF  M   GF P+V TY TL++G C 
Sbjct: 114 LAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCK 173

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIF----------------------------- 341
              L+ A+   + M   GI P++ T+N+LI                              
Sbjct: 174 DRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVS 233

Query: 342 ------GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
                   CK+GK+ EA+ +   M    V P+VVTY  L++G+      +    +++ M+
Sbjct: 234 LNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMV 293

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           RNG   ++++YN LI G CK  +  KA YL +++ +  L+PN  TYS LI G C     +
Sbjct: 294 RNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQ 353

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L+  M+  G  PN   + +L+   C+N     A  +L  +    + PD  + +   
Sbjct: 354 DAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAI 413

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            G+   G  E A  LF  +  RGL P
Sbjct: 414 DGMCRAGDLEAARDLFSNLAPRGLQP 439



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 124/252 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   +  R +   A   F  M   G +  + S N  ++     +R+D A+  ++E
Sbjct: 267 VTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEE 326

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + PN  T + ++H  C +G ++ A+ +F  M + G IP++ TY+ L+   C    
Sbjct: 327 MCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHR 386

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ AM     +E + + P+V  +N  I G C+ G L  A  +FS +    + P+V T+N 
Sbjct: 387 LAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNI 446

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I G  + G  +  + L+ EM  NG   +  TYN +  GL +  KT +A  L++++    
Sbjct: 447 MIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506

Query: 434 LVPNASTYSALI 445
              + ST + L+
Sbjct: 507 FSADVSTTALLV 518



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 93/203 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L     H  + ++A   F +M   G +P + + +  L  L  + R+  A+   K 
Sbjct: 337 MTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKA 396

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + + P+V   N+ +   C+ G +E A ++F N+   G  P V T+N +I G C +GL
Sbjct: 397 IEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGL 456

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K    M++NG   N  T+NT+  G  +  K   A ++  EM A   S +V T   
Sbjct: 457 LDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTAL 516

Query: 374 LINGYGQVGNSEMGASLYEEMLR 396
           L+      G  +    +  E +R
Sbjct: 517 LVKMLSDDGLDQSVKQILCEFMR 539


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 179/359 (49%), Gaps = 2/359 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +  ++L   Y    +  +A     Q    GF P   + N F++ L  +  V  AL
Sbjct: 251 CSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHAL 310

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+V+T N+V++  CK G +E A  +   M   G +P +TT+NTLI   
Sbjct: 311 KVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVAL 370

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+   L  A+     +   G+ P+V TFN LI   CK G    A R+F EMK++  +P+ 
Sbjct: 371 CSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDE 430

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+    +G       L +EM   G     +TYN +I GLCK+ + ++A  +   
Sbjct: 431 VTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQ 490

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  K  + A QL   MI  G +PN   +  +++ +C+  D
Sbjct: 491 MDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGD 550

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL--LPKGFD 545
             +AA++L  M       D +    L +GL   G+ ++A+KL R M I+G+   PK ++
Sbjct: 551 IKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYN 609



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 199/407 (48%), Gaps = 25/407 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T   ++IV++ L KN + + ++ IL  +++                  R C 
Sbjct: 319 EGHDPDVFT---YNIVVNCLCKNGQLEEAKGILNQMVE------------------RGCL 357

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L        +   A D   Q+   G  P + + N  +++L       +AL  
Sbjct: 358 PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRL 417

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N ++   C LG + +A+++ K MES G   S  TYNT+I G C 
Sbjct: 418 FEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCK 477

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  N ITFNTLI G CK  ++ +AN++ S+M +  + PN +T
Sbjct: 478 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNIT 537

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + + M  NG +VD++TY  LI GLCK G+T+ A  L++ + 
Sbjct: 538 YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMR 597

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              +      Y+ +I     R N+  A  L++ M   G  P+   ++++    C+     
Sbjct: 598 IKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSI 657

Query: 491 RAA-EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           R A + LLEM++K   P+      L  GL + G D+      R +EI
Sbjct: 658 REAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGMDDY---FIRAIEI 701



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 1/354 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D     ++++        +   A     QM + G LP I + N  + +L    R++ AL 
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             +++    +SP+VYT N++++A CK+G  + A+ +F+ M+S G  P   TYNTLI   C
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           + G L  A+     ME  G   + +T+NT+I G CKK ++ EA  +F +M    +S N +
Sbjct: 442 SLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAI 501

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NTLI+G  +    +    L  +M+  G++ + +TYN+++   CK+G  KKAA +++ +
Sbjct: 502 TFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTM 561

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             N    +  TY  LI G C    ++ A +L + M   G R     +  ++ +  +  + 
Sbjct: 562 TANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNT 621

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD-ELAMKLFRKMEIRGLLPK 542
             A  +  EM E    PD+     ++ GL   G     A     +M  +G +P+
Sbjct: 622 RDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPE 675



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 164/341 (48%), Gaps = 2/341 (0%)

Query: 200 FKTYAHRKKFRNATDTFCQMRD--YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            ++YA ++ F +A D      D  +G        N  L+ L++  ++ +    Y EM   
Sbjct: 120 LESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGER 179

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+V T N +M A C+   +  AV + + M S G  P  TT+ TL+ G   +G +  A
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ K  M + G  P  +T N LI G+CK G++ +A     +  A    P+ +TYNT +NG
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             Q G+      + + M++ G   D+ TYN ++  LCK G+ ++A  ++  + +   +P+
Sbjct: 300 LCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPD 359

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
            +T++ LI   C     E A  L + +   G  P+ + F +L++  C+  D   A  +  
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           EM      PD +  + L   L   GK   A+ L ++ME  G
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 179/380 (47%), Gaps = 4/380 (1%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ES  R  L  D+ DL     D +        +  +V++ L        K +     + +M
Sbjct: 121 ESYARQQLFVDAVDLVLNQLDPLFG----IQADTVVYNHLLNVLVEGSKMKLLETVYSEM 176

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            + G  P + + N  + +L  + +V  A+   +EM  + ++P+  T   +M  F + G I
Sbjct: 177 GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSI 236

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+ V   M  MG  P+  T N LI+G+C  G +  A+ +      NG +P+ IT+NT 
Sbjct: 237 KAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTF 296

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G C+ G +  A ++   M      P+V TYN ++N   + G  E    +  +M+  G 
Sbjct: 297 VNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGC 356

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI T+N LI+ LC   + ++A  L + +    L P+  T++ LI   C   + + A +
Sbjct: 357 LPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALR 416

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L++ M  SGC P++  +  L+   C      +A ++L EM        ++  + +  GL 
Sbjct: 417 LFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLC 476

Query: 520 HCGKDELAMKLFRKMEIRGL 539
              + E A ++F +M+++G+
Sbjct: 477 KKMRIEEAEEVFDQMDLQGI 496



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 123/257 (47%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M   G  P V T+NTL+   C    +  A+     M  +G+ P+  TF TL+ GF 
Sbjct: 172 VYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFV 231

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ + M     SP  VT N LINGY ++G  E      ++ + NG + D +
Sbjct: 232 EEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQI 291

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN  + GLC+ G    A  ++  + +    P+  TY+ ++   C     E A  +   M
Sbjct: 292 TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 351

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   F  L+   C     + A ++  ++  K ++PD    + L + L   G  
Sbjct: 352 VERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDP 411

Query: 525 ELAMKLFRKMEIRGLLP 541
           +LA++LF +M+  G  P
Sbjct: 412 QLALRLFEEMKSSGCTP 428



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 2/291 (0%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES--MGFIPSVTTYNTLISGHCN 310
           EMRR      V  ++  + ++ +  +   AV++  N      G       YN L++    
Sbjct: 103 EMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVE 162

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              + L     + M + GI+P+V+TFNTL+   C+  ++  A  +  EM ++ V+P+  T
Sbjct: 163 GSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           + TL+ G+ + G+ +    +   ML  G     +T N LI G CK G+ + A   ++   
Sbjct: 223 FTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            N   P+  TY+  + G C   +   A ++   M++ G  P+   + ++++  C+N   +
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  +L +M+E+   PD    + L   L    + E A+ L R++ ++GL P
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 174/348 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K       +  A + F +M D+G  P + S    +        ++ AL  YKE
Sbjct: 166 VTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 225

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   I P++ + + ++  F + G ++ A+   + M   G +P    Y  +I G C  GL
Sbjct: 226 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 285

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A++ ++ M   G  P+V+T+NTL+ G CK+ +L +A  + +EM+   V P++ T+ T
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY   G  +    L++ ML   ++ DI+TYN LI G+C++G   KA  L  D+    
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TYS LI   C +   E AF     MI  G  PN   +  ++  +C++ +  +  
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +M+   ++PD I  + L  G     K   A KL   ME   + P
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 513



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 9/364 (2%)

Query: 185 SYRMCDSS-----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +YR+  SS         +++   Y    +F        +M      P + + N  + +  
Sbjct: 82  AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 141

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +   + A+     M    + P + T N V+   C+ G+ ++A EVFK M+  G  P V 
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           ++  LI G C  G +  A+K    M   GI+P++++F+ LI  F ++GK+  A     EM
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   + P+ V Y  +I G+ + G       + +EM+  G   D++TYN L+ GLCKE + 
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L+ ++ +  + P+  T++ LI G C+    ++A QL+ +M+    RP+   +  L
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIR 537
           +   C+  D D+A ++  +M  + + P+ +  S L     HC  G+ E A     +M  +
Sbjct: 382 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS--HCEKGQVEDAFGFLDEMINK 439

Query: 538 GLLP 541
           G+LP
Sbjct: 440 GILP 443



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 198/395 (50%), Gaps = 10/395 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLV--FDLLFKTYAHRKKFRNATDTF 216
           S+L+G+  S  +D   ++F        M D   +P V  F +L   +    +   A   +
Sbjct: 170 SVLKGLCRSGMWDKAWEVFKE------MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 223

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +MR  G  P + S +  +       ++D A+ + +EMR   + P+     MV+  FC+ 
Sbjct: 224 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 283

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G++  A+ V   M   G +P V TYNTL++G C +  L  A    N M + G+ P++ TF
Sbjct: 284 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 343

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            TLI G+C +GKL +A ++F  M    + P++VTYNTLI+G  + G+ +    L+++M  
Sbjct: 344 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 403

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I  + +TY+ LI   C++G+ + A   + ++    ++PN  TY+++I G C   N  +
Sbjct: 404 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 463

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
             +  + M+ +   P+   +  L+  + + +    A ++L  M ++ + PD +  + L +
Sbjct: 464 GQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 523

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           G    G  + A  +F KM  +G+ P  +  +  IN
Sbjct: 524 GFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 558



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 150/285 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP + + N  L+ L    R+  A G   EMR   + P++ T   ++H +C  G
Sbjct: 295 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 354

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +++A+++F  M +    P + TYNTLI G C +G L  A    + M    I PN +T++
Sbjct: 355 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 414

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++ +A     EM    + PN++TYN++I GY + GN   G    ++M+ N
Sbjct: 415 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 474

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++TYN LI G  KE K   A  L+  ++K  + P+  TY+ LI G  V  N + A
Sbjct: 475 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             +++ M   G  P+++ +  +++      +   A ++  EML++
Sbjct: 535 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 171/350 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P VFDLL +TY   +K R A + F  + D+       + N  L++L  +    +A   Y
Sbjct: 24  QPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAY 83

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +  +    N YTLN+++H +CK    ++   V   ME     P V T+N ++      
Sbjct: 84  RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 143

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    AM   + M   G++P ++T+N+++ G C+ G   +A  +F EM    V+P+V ++
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 203

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI G+ +VG  E    +Y+EM   GIK D+++++ LI    + GK   A   ++++  
Sbjct: 204 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 263

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+   Y+ +I G C       A ++   M+  GC P+   +  L++  C+      
Sbjct: 264 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 323

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +L EM E+ + PD    + L  G    GK + A++LF  M  + L P
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 373



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 144/280 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L       ++  +A     +MR+ G  P + +    +       ++D AL
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M   R+ P++ T N ++   C+ G +++A +++ +M S    P+  TY+ LI  H
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M   GI PN++T+N++I G+C+ G + +  +   +M    VSP++
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 480

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLI+GY +         L   M +  ++ D++TYN LI G    G  ++A ++ + 
Sbjct: 481 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 540

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +    + P+  TY ++I G     NS+ AFQL+  M++ G
Sbjct: 541 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 95/199 (47%)

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G  H A   +  + ++N   N  T N +++ Y +    +   ++  EM +  +  D++
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+N ++    + G  + A  LV  +    L P   TY++++ G C     ++A++++K M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G  P+   F +L+  FC+  + + A ++  EM  + + PD +  S L       GK 
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 525 ELAMKLFRKMEIRGLLPKG 543
           + AM   R+M   GL+P G
Sbjct: 252 DHAMAYLREMRCFGLVPDG 270


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 202/403 (50%), Gaps = 19/403 (4%)

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV 195
           ++LT++  +++L++L K  +F                +L  ++++ ++ +      S + 
Sbjct: 143 AALTIQACNVLLYVLVKTGRF----------------ELLWRIYEEMISNGL--SPSVIT 184

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L      +     A + F +MR  G +P +      +  L    +++ A   ++ MR
Sbjct: 185 FGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMR 244

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PNVYT N +M  +CKL   ++A+ ++++M   G +P V T+  LI G C  G + 
Sbjct: 245 EVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMK 304

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M K  + PN+  +N+LI  +CK G + EA  +F E++   VSP+V TY+ LI
Sbjct: 305 AARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILI 364

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G   V  +E   +++E+M + GI  + +TYN+LI G CKEGK  KA  +   + +N + 
Sbjct: 365 RGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVE 424

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T+S LI G C  +N + A  +Y  M+     P+   +  ++   C+      A ++
Sbjct: 425 PNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKL 484

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF-RKMEIR 537
             +ML+  + P+   +S L  GL   GK   A++LF  K+E +
Sbjct: 485 YSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ 527



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 178/362 (49%), Gaps = 43/362 (11%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I++CN  L  L+ + R ++    Y+EM  N +SP+V T   ++   C+ G + RA E+F 
Sbjct: 147 IQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFD 206

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G +P+V  Y  LI G C+   +  A      M + G+ PNV T+NTL+ G+CK  
Sbjct: 207 EMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLA 266

Query: 348 KLHEANRI-------------------------FSEMKAT----------NVSPNVVTYN 372
              +A R+                         F EMKA           +V+PN+  YN
Sbjct: 267 NAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYN 326

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+ Y +VG+     +L+ E+ R  +  D+ TY+ LI GLC   +T++A  + + + K 
Sbjct: 327 SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKE 386

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            ++ N+ TY++LI G C     ++A ++   M  +G  PN   F  L+  +C+  +   A
Sbjct: 387 GILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAA 446

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
             +  EM+ K ++PD +  + +  G  HC  G  + A+KL+  M   G+ P  +    TI
Sbjct: 447 MGIYSEMVIKSLSPDVVTYTAMIDG--HCKYGSMKEALKLYSDMLDNGITPNCY----TI 500

Query: 551 NC 552
           +C
Sbjct: 501 SC 502



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 205/454 (45%), Gaps = 34/454 (7%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS 176
           Q D + + E F  ++  K    T+  ++I++  L  + K + +ES+ R + +   +  P+
Sbjct: 195 QGDLLRAQEMFDEMRV-KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVY--PN 251

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
                 +Y+Y          + L   Y      + A   +  M   G +P + +    + 
Sbjct: 252 ------VYTY----------NTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILID 295

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L     +  A   +  M +  ++PN+   N ++ A+CK+G +  A+ +F  +E     P
Sbjct: 296 GLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSP 355

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V TY+ LI G C+      A      M K GI  N +T+N+LI G CK+GK+ +A  I 
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEIC 415

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           S+M    V PNV+T++TLI+GY ++ N +    +Y EM+   +  D++TY A+I G CK 
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKY 475

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR---------- 466
           G  K+A  L  D+  N + PN  T S L+ G C       A +L+   I           
Sbjct: 476 GSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDA 535

Query: 467 SGCRP---NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
            G +P   N   +  L+   CQ+  F +A ++  +M    + PD +I   +  GL     
Sbjct: 536 GGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV-- 593

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
             + M L   M   G++P     +    C  E+G
Sbjct: 594 KYILMMLHADMLKFGVIPNSAVHVILCECYQESG 627



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 161/349 (46%), Gaps = 51/349 (14%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F +L        + + A + F  M  +   P I   N  + +      V  A+  + E
Sbjct: 288 VTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLE 347

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + R  +SP+V+T ++++   C +   E A  +F+ M   G + +  TYN+LI G C +G 
Sbjct: 348 LERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGK 407

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  + M +NG++PNVITF+TLI G+CK   L  A  I+SEM   ++SP+VVTY  
Sbjct: 408 MDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTA 467

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGI-----------------------------KVDIL 404
           +I+G+ + G+ +    LY +ML NGI                             K++  
Sbjct: 468 MIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ 527

Query: 405 T-------------------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           T                   Y ALI GLC++G+  KA  L  D+ +  L P+   Y  ++
Sbjct: 528 TPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVML 587

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            G  + +       L+  M++ G  PN  +  +L   + Q   F ++A+
Sbjct: 588 RG--LFQVKYILMMLHADMLKFGVIPNSAVHVILCECY-QESGFLKSAQ 633



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 117/293 (39%), Gaps = 52/293 (17%)

Query: 190 DSSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           + SP VF   +L +      +   A + F +M   G L    + N  +       ++D A
Sbjct: 352 EVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKA 411

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L    +M  N + PNV T + ++  +CK+  ++ A+ ++  M      P V TY  +I G
Sbjct: 412 LEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVIT-------------------------------- 335
           HC  G +  A+K  + M  NGI PN  T                                
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRC 531

Query: 336 ----------------FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
                           +  LI G C+ G+  +A ++FS+M+   + P+ V Y  ++ G  
Sbjct: 532 NVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           QV    M   L+ +ML+ G+  +   +  L     + G  K A    KDL++N
Sbjct: 592 QVKYILM--MLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDLEEN 642


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 174/348 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ + K       +  A + F +M D+G  P + S    +        ++ AL  YKE
Sbjct: 227 VTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKE 286

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   I P++ + + ++  F + G ++ A+   + M   G +P    Y  +I G C  GL
Sbjct: 287 MRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGL 346

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A++ ++ M   G  P+V+T+NTL+ G CK+ +L +A  + +EM+   V P++ T+ T
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY   G  +    L++ ML   ++ DI+TYN LI G+C++G   KA  L  D+    
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TYS LI   C +   E AF     MI  G  PN   +  ++  +C++ +  +  
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +M+   ++PD I  + L  G     K   A KL   ME   + P
Sbjct: 527 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 175/364 (48%), Gaps = 9/364 (2%)

Query: 185 SYRMCDSS-----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +YR+  SS         +++   Y    +F        +M      P + + N  + +  
Sbjct: 143 AYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARF 202

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +   + A+     M    + P + T N V+   C+ G+ ++A EVFK M+  G  P V 
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           ++  LI G C  G +  A+K    M   GI+P++++F+ LI  F ++GK+  A     EM
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   + P+ V Y  +I G+ + G       + +EM+  G   D++TYN L+ GLCKE + 
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L+ ++ +  + P+  T++ LI G C+    ++A QL+ +M+    RP+   +  L
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIR 537
           +   C+  D D+A ++  +M  + + P+ +  S L     HC  G+ E A     +M  +
Sbjct: 443 IDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDS--HCEKGQVEDAFGFLDEMINK 500

Query: 538 GLLP 541
           G+LP
Sbjct: 501 GILP 504



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 153/291 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP + + N  L+ L    R+  A G   EMR   + P++ T   ++H +C  G
Sbjct: 356 EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 415

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +++A+++F  M +    P + TYNTLI G C +G L  A    + M    I PN +T++
Sbjct: 416 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 475

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++ +A     EM    + PN++TYN++I GY + GN   G    ++M+ N
Sbjct: 476 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 535

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++TYN LI G  KE K   A  L+  ++K  + P+  TY+ LI G  V  N + A
Sbjct: 536 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
             +++ M   G  P+++ +  +++      +   A ++  EML++  APD 
Sbjct: 596 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 198/395 (50%), Gaps = 10/395 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLV--FDLLFKTYAHRKKFRNATDTF 216
           S+L+G+  S  +D   ++F        M D   +P V  F +L   +    +   A   +
Sbjct: 231 SVLKGLCRSGMWDKAWEVFKE------MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIY 284

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +MR  G  P + S +  +       ++D A+ + +EMR   + P+     MV+  FC+ 
Sbjct: 285 KEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRA 344

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G++  A+ V   M   G +P V TYNTL++G C +  L  A    N M + G+ P++ TF
Sbjct: 345 GLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTF 404

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            TLI G+C +GKL +A ++F  M    + P++VTYNTLI+G  + G+ +    L+++M  
Sbjct: 405 TTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHS 464

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             I  + +TY+ LI   C++G+ + A   + ++    ++PN  TY+++I G C   N  +
Sbjct: 465 REIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSK 524

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
             +  + M+ +   P+   +  L+  + + +    A ++L  M ++ + PD +  + L +
Sbjct: 525 GQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLIN 584

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           G    G  + A  +F KM  +G+ P  +  +  IN
Sbjct: 585 GFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 619



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 171/350 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P VFDLL +TY   +K R A + F  + D+       + N  L++L  +    +A   Y
Sbjct: 85  QPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAY 144

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +  +    N YTLN+++H +CK    ++   V   ME     P V T+N ++      
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 204

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    AM   + M   G++P ++T+N+++ G C+ G   +A  +F EM    V+P+V ++
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 264

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI G+ +VG  E    +Y+EM   GIK D+++++ LI    + GK   A   ++++  
Sbjct: 265 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 324

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+   Y+ +I G C       A ++   M+  GC P+   +  L++  C+      
Sbjct: 325 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 384

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +L EM E+ + PD    + L  G    GK + A++LF  M  + L P
Sbjct: 385 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRP 434



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 146/284 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L       ++  +A     +MR+ G  P + +    +       ++D AL
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M   R+ P++ T N ++   C+ G +++A +++ +M S    P+  TY+ LI  H
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M   GI PN++T+N++I G+C+ G + +  +   +M    VSP++
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 541

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLI+GY +         L   M +  ++ D++TYN LI G    G  ++A ++ + 
Sbjct: 542 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 601

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +    + P+  TY ++I G     NS+ AFQL+  M++ G  P+
Sbjct: 602 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 95/199 (47%)

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G  H A   +  + ++N   N  T N +++ Y +    +   ++  EM +  +  D++
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+N ++    + G  + A  LV  +    L P   TY++++ G C     ++A++++K M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G  P+   F +L+  FC+  + + A ++  EM  + + PD +  S L       GK 
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 525 ELAMKLFRKMEIRGLLPKG 543
           + AM   R+M   GL+P G
Sbjct: 313 DHAMAYLREMRCFGLVPDG 331


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 182/346 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F ++ K      +   + D   ++R++GF P +      +        ++ A   + EM 
Sbjct: 166 FGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +  N +T  +++H   K GI ++  E+++ M+  G  P++ TYN +++  C  G   
Sbjct: 226 KFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTK 285

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M + G+  N++T+NTLI G C++ K +EAN +  +MK+  ++PN++TYNTLI
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLI 345

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+  V       SL  ++   G+   ++TYN L+ G CK+G T  A  +VK++++  + 
Sbjct: 346 DGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIK 405

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI       N E+A QL  SM   G  P+ H + +L+  FC     + A+ +
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              M+EK   P+ +I + +  G    G    A++LFR+ME + L P
Sbjct: 466 FKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPP 511



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 193/402 (48%), Gaps = 20/402 (4%)

Query: 142 THSIVLHILTK--NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
             S++L +++     +F +S S+L  + +S++    S+L++ I+                
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVII---------------- 101

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y   +   ++   F +M D GF+P     N  L+ ++ S   +    F+ E  + ++
Sbjct: 102 -NAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIKV 159

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             +VY+  +V+   C+ G IE++ ++   +   GF P+V  Y TLI G C KG +  A  
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M K G+  N  T+  LI G  K G   +   ++ +M+   V PN+ TYN ++N   
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLC 279

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G ++    +++EM   G+  +I+TYN LI GLC+E K  +A  ++  +  + + PN  
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C  +   +A  L + +   G  P+   + +L+S FC+  D   A +V+ EM
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+ + P  +  + L          E A++L   ME  GL P
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTP 441



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 155/314 (49%), Gaps = 4/314 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LFK    ++ F    + + +M+++G  P + + N  ++ L    R   A   + EMR   
Sbjct: 243 LFKNGIKKQGF----EMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +S N+ T N ++   C+      A EV   M+S G  P++ TYNTLI G C    L  A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKAL 358

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ++  G+ P+++T+N L+ GFCKKG    A ++  EM+   + P+ VTY  LI+ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTF 418

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  N E    L   M   G+  D+ TY+ LI G C +G+  +A+ L K + +    PN 
Sbjct: 419 ARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNE 478

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ ++ G C   +S RA +L++ M      PN   +  ++   C+      A  ++ +
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 499 MLEKCMAPDSIILS 512
           M++  + P   IL+
Sbjct: 539 MIDSGIGPSDSILN 552



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 164/305 (53%), Gaps = 5/305 (1%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           ++A   F +MR+ G    I + N  +  L    + + A     +M+ + I+PN+ T N +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTL 344

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  FC +  + +A+ + ++++S G  PS+ TYN L+SG C KG  S A K    ME+ GI
Sbjct: 345 IDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGI 404

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +T+  LI  F +   + +A ++ S M+   ++P+V TY+ LI+G+   G     + 
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASR 464

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L++ M+    + + + YN ++LG CKEG + +A  L +++++  L PN ++Y  +I   C
Sbjct: 465 LFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLC 524

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             + S+ A  L + MI SG  P+  I  ++  +  +N+   R+ +   E     M  D +
Sbjct: 525 KERKSKEAEGLVEKMIDSGIGPSDSILNLI--SRAKNDSHSRSMD---EEEPASMVFDGL 579

Query: 510 ILSEL 514
           ++ EL
Sbjct: 580 MVCEL 584



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 150/300 (50%), Gaps = 18/300 (6%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T++ V++ L K+ + K            D+F    K+FD +    R    + + ++ L
Sbjct: 268 LHTYNCVMNQLCKDGRTK------------DAF----KVFDEM--RERGVSCNIVTYNTL 309

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                   K   A +   QM+  G  P + + N  +       ++  AL   ++++   +
Sbjct: 310 IGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGL 369

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP++ T N+++  FCK G    A +V K ME  G  PS  TY  LI        +  A++
Sbjct: 370 SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            ++ ME+ G+ P+V T++ LI GFC KG+++EA+R+F  M      PN V YNT++ GY 
Sbjct: 430 LRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYC 489

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G+S     L+ EM    +  ++ +Y  +I  LCKE K+K+A  LV+ +  + + P+ S
Sbjct: 490 KEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDS 549



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 103/214 (48%), Gaps = 8/214 (3%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + +++L   +  +     A     +M + G  P   +    + +   S+ ++ A+   
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    ++P+V+T ++++H FC  G +  A  +FK+M    F P+   YNT++ G+C +
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A++    ME+  + PNV ++  +I   CK+ K  EA  +  +M  + + P+    
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPS---- 547

Query: 372 NTLINGYGQVGNSEMGASLYEE----MLRNGIKV 401
           ++++N   +  N     S+ EE    M+ +G+ V
Sbjct: 548 DSILNLISRAKNDSHSRSMDEEEPASMVFDGLMV 581


>gi|356538835|ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 215/450 (47%), Gaps = 26/450 (5%)

Query: 80  DFVNIAYSHLIHSDWKKL-TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           D V+I   H   S W  L +A    +TP     + L ++    L+L FF W ++    + 
Sbjct: 37  DAVSILTHHRSKSRWSNLRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSKSLCNH 96

Query: 139 TLETHSIVLHILTKNRKFKSSESILR-GILDSDSFD--------LPSKLFDSILYSYRMC 189
            L ++S ++H+L + R    +  ++R  I  S   D         P  LF++++ +YR  
Sbjct: 97  NLASYSSIIHLLARARLSSHAYDLIRTAIRASHQNDEENCRFNSRPLNLFETLVKTYRDS 156

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            S+P VFDLL K     KK   + +    +   G  P + + N  +S +  S  VD    
Sbjct: 157 GSAPFVFDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYA 216

Query: 250 FYKEMRR--------------NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            Y+E  R               R++PNV+T N +M    + G++ER  +++  M+   + 
Sbjct: 217 IYREFFRLDEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEMKC-NYK 275

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+  +Y+ L++  C++G +  A K    +    I+P+V+++NT+I GFC  G +  A   
Sbjct: 276 PNAYSYSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEF 335

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F EM    V     TY  L+ GY  +G+ +    +Y++M R+ ++ D  T + +I  LC 
Sbjct: 336 FREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDASTLDVMIRLLCD 395

Query: 416 EGKTKKAAYLVK-DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           +G+ +++   V+  + K  L+P   +Y ALI G C     E A ++   M+  G +PN  
Sbjct: 396 KGRVRESLEFVRCAVGKFDLIPMEKSYEALIKGLCFDGRMEEALKVQAEMVGKGFQPNSE 455

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+   +  + ++ + + A  +  EML+  M
Sbjct: 456 IYGAFVDGYVRHGNEEMAEALRKEMLQNQM 485



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 116/271 (42%), Gaps = 20/271 (7%)

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           L + E  V+ +++  S  F+     ++ LI    +   L  +++   ++   GI P V T
Sbjct: 143 LNLFETLVKTYRDSGSAPFV-----FDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVST 197

Query: 336 FNTLIFGFCKKGKLHEANRIFSEM--------------KATNVSPNVVTYNTLINGYGQV 381
            N+LI   CK   + E   I+ E                   V+PNV TYN L+    Q 
Sbjct: 198 LNSLISRVCKSRGVDEGYAIYREFFRLDEENNEISKRGSGFRVTPNVHTYNDLMLCCYQD 257

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  E    ++ EM  N  K +  +Y+ L+   C EG+   A  L ++L    + P+  +Y
Sbjct: 258 GLVERVEKIWIEMKCN-YKPNAYSYSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSY 316

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I G C   +  RA + ++ M  +G       +E L+  +C   D D A  V  +M  
Sbjct: 317 NTIIGGFCTIGDVGRAEEFFREMAVAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMAR 376

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             + PD+  L  +   L   G+   +++  R
Sbjct: 377 SDLRPDASTLDVMIRLLCDKGRVRESLEFVR 407



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 93/223 (41%), Gaps = 15/223 (6%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ LI       KL  +  I   + +  +SP V T N+LI+   +    + G ++Y E 
Sbjct: 162 VFDLLIKACLDSKKLDPSIEIVRMLLSRGISPKVSTLNSLISRVCKSRGVDEGYAIYREF 221

Query: 395 LR------------NGIKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            R            +G +V  ++ TYN L+L   ++G  ++   +  ++ K +  PNA +
Sbjct: 222 FRLDEENNEISKRGSGFRVTPNVHTYNDLMLCCYQDGLVERVEKIWIEM-KCNYKPNAYS 280

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS L+   C       A +L++ +      P+   +  ++  FC   D  RA E   EM 
Sbjct: 281 YSVLMATFCDEGRMGDAEKLWEELRSEKIEPDVVSYNTIIGGFCTIGDVGRAEEFFREMA 340

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
              +   +     L  G  + G  + A+ +++ M    L P  
Sbjct: 341 VAGVGTTASTYEHLVKGYCNIGDVDSAVLVYKDMARSDLRPDA 383


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 184/348 (52%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  L      + +   A D F +M   G +    +    ++ L  +         Y++
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ + + PN+YT N VM+  CK G  + A +VF  M   G   ++ TYNTLI G C +  
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K  + M+ +GI PN+IT+NTLI GFC  GKL +A  +  ++K+  +SP++VTYN 
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+ + G++   A + +EM   GIK   +TY  LI    +    +KA  L   +++  
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVP+  TYS LI G C++     A +L+KSM+   C PN+ I+  ++  +C+     RA 
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L EM EK +AP+      +   L    K + A +L  KM   G+ P
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 214/436 (49%), Gaps = 36/436 (8%)

Query: 142 THSIVLHILTKNR----KFKSSESILRGILDSDSFDLPSKLFDSIL-------------- 183
           T S +LH LT++     KF+  E I+   + S S +L    F+ ++              
Sbjct: 76  TSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYL 135

Query: 184 -------------YSYRMCDSSPLVFD-----LLFKTYAHRKKFRNATDTFCQMRDYGFL 225
                        +S+   + S +V D     +L K      +   + D   ++ ++GF 
Sbjct: 136 LTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS 195

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +      +        ++ A   + EM +  +  N  T  ++++   K G+ ++  E+
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           ++ M+  G  P++ TYN +++  C  G    A +  + M + G+  N++T+NTLI G C+
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + KL+EAN++  +MK+  ++PN++TYNTLI+G+  VG      SL  ++   G+   ++T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ G C++G T  AA +VK++++  + P+  TY+ LI       N E+A QL  SM 
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  P+ H + +L+  FC     + A+ +   M+EK   P+ +I + +  G    G   
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495

Query: 526 LAMKLFRKMEIRGLLP 541
            A+KL ++ME + L P
Sbjct: 496 RALKLLKEMEEKELAP 511



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 4/314 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           LFK    ++ F    + + +M++ G  P + + N  ++ L    R   A   + EMR   
Sbjct: 243 LFKNGVKKQGF----EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +S N+ T N ++   C+   +  A +V   M+S G  P++ TYNTLI G C  G L  A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ++  G+ P+++T+N L+ GFC+KG    A ++  EM+   + P+ VTY  LI+ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  N E    L   M   G+  D+ TY+ LI G C +G+  +A+ L K + + +  PN 
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   +S RA +L K M      PN   +  ++   C+      A  ++ +
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538

Query: 499 MLEKCMAPDSIILS 512
           M++  + P + ILS
Sbjct: 539 MIDSGIDPSTSILS 552



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/270 (30%), Positives = 151/270 (55%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           ++A   F +MR+ G    I + N  +  L    +++ A     +M+ + I+PN+ T N +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  FC +G + +A+ + ++++S G  PS+ TYN L+SG C KG  S A K    ME+ GI
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +T+  LI  F +   + +A ++   M+   + P+V TY+ LI+G+   G     + 
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L++ M+    + + + YN +ILG CKEG + +A  L+K++++  L PN ++Y  +I   C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             + S+ A +L + MI SG  P+  I  ++
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 85/176 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + +++L   +  +     A     +M + G  P   +    + +   S+ ++ A+   
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M    + P+V+T ++++H FC  G +  A  +FK+M      P+   YNT+I G+C +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           G    A+K    ME+  + PNV ++  +I   CK+ K  EA R+  +M  + + P+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 166/326 (50%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M   G LP + + N  +      +R D A GF + M    + PN+ T NM+++  C+
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++   EV   M   G++P   TYNTL++G+C +G    A+     M +NG+ PNV+T
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           + +LI   CK G L+ A   F +M    + PN  TY T+ING+ Q G  +    +  EM 
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           R+G    I+TYNALI G C  G+ ++A  L++D+    ++P+  +YS +I+G    +  +
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELD 245

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           RAFQ+   MI     P+   +  L+   C+      A ++  EML   + PD    + L 
Sbjct: 246 RAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLI 305

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +     G    A+ L  +M  +G LP
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLP 331



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 167/313 (53%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           + L F+KEM RN   PNV T N ++  +CKL   + A    ++M   G  P++ T+N +I
Sbjct: 1   MGLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G C  G L    +    M + G  P+ +T+NTL+ G+CK+G  H+A  + +EM    +S
Sbjct: 61  NGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLS 120

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNVVTY +LIN   + GN       +++M   G+  +  TY  +I G  ++G   +A  +
Sbjct: 121 PNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++ ++  +P+  TY+ALI G CV    E A  L + M+  G  P+   +  ++S F +
Sbjct: 181 LNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           N++ DRA ++ +EM+ K + PD++  S L  GL    +   A  +F++M    L P  F 
Sbjct: 241 NQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFT 300

Query: 546 KLRTINCAPENGE 558
               IN   + G+
Sbjct: 301 YTTLINAYCKEGD 313



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 178/352 (50%), Gaps = 5/352 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+++        + +  ++   +M   G++P   + N  ++          AL  + E
Sbjct: 54  ITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAE 113

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M RN +SPNV T   ++++ CK G + RA+E F  M   G  P+  TY T+I+G   +GL
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +  N M ++G  P+++T+N LI G C  G++ EA  +  +M    V P+VV+Y+T
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G+ +    +    +  EM+   +  D +TY++LI GLC++ +  +A  + +++    
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY+ LI   C   +  +A  L+  MI+ G  P+   + +L++   +      A 
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEAR 353

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKG 543
            +LL++      P ++  + L   + +C   E   A+ L +   ++GL+ + 
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTL---IENCCNIEFKSAVALVKGFCMKGLMDEA 402



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 178/381 (46%), Gaps = 50/381 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y     F  A     +M   G  P + +    ++S+  +  ++ A+ F+ +
Sbjct: 89  VTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQ 148

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T   +++ F + G+++ A  V   M   GFIPS+ TYN LI+GHC  G 
Sbjct: 149 MHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGR 208

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGF------------------------------ 343
           +  A+     M   G+ P+V++++T+I GF                              
Sbjct: 209 MEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSS 268

Query: 344 -----CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                C++ +L EA  +F EM    + P+  TY TLIN Y + G+      L++EM++ G
Sbjct: 269 LIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS---------------A 443
              D +TYN LI GL K+ ++K+A  L+  L  +  +P+A TY+               A
Sbjct: 329 FLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVA 388

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           L+ G C++   + A Q+++SMI    +PN+ I+ +++   C+  +  +A ++  EM+   
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448

Query: 504 MAPDSIILSELYSGLHHCGKD 524
             P ++ +  L   L   G D
Sbjct: 449 FVPHTVTVLALVKALFTEGMD 469



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 155/351 (44%), Gaps = 22/351 (6%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   +    +   A      M   G LP + S +  +S    ++ +D A    
Sbjct: 192 SIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMK 251

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + P+  T + ++   C+   +  A ++F+ M ++   P   TY TLI+ +C +
Sbjct: 252 VEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L+ A+   + M + G  P+ +T+N LI G  K+ +  EA R+  ++   +  P+ VTY
Sbjct: 312 GDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTY 371

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NTLI                     N   ++  +  AL+ G C +G   +A  + + +  
Sbjct: 372 NTLI--------------------ENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMIN 411

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK-HIFEMLMSTFCQNEDFD 490
            +  PN + Y+ +I G C   N  +A++LYK M+     P+   +  ++ + F +  D  
Sbjct: 412 KNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMD-G 470

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EV+ ++L  C   D+ +   L       G  ++   L  +M   GL+P
Sbjct: 471 ELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 58/299 (19%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +   +A  ++   A     +M     LP   + +  +  L +  R+  A   ++EM 
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             ++ P+ +T   +++A+CK G + +A+ +   M   GF+P   TYN LI+G   +    
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIF---------------GFCKKGKLHEANRIFSEMK 360
            A +    +  +   P+ +T+NTLI                GFC KG + EA+++F  M 
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMI 410

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK----- 415
             N  PN   YN +I+G+ ++GN      LY+EM    + VD + +   +L L K     
Sbjct: 411 NKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEM----VHVDFVPHTVTVLALVKALFTE 466

Query: 416 ----------------------------------EGKTKKAAYLVKDLDKNSLVPNAST 440
                                             EG       L+ ++ K+ L+P+  T
Sbjct: 467 GMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 180/351 (51%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +++ ++++ +       K   +A D F +M   G  P + + N  +S L +  R   A  
Sbjct: 253 EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASR 312

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PNV T N ++ AF K G +  A ++F  M      P++ TYN+LI+G C
Sbjct: 313 LLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 372

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +   LM      P+V+T+NTLI GFCK  ++ E   +F EM    +  N V
Sbjct: 373 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI G  Q G+ +M   ++++M+ +G+  DI+TY+ L+ GLCK GK +KA  + + L
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ + PN  TY+ +I G C     E  + L+ S+   G +PN  I+  ++S FC+    
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + A  +  EM E    PDS   + L       G    + +L ++M   G +
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 603



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/325 (32%), Positives = 172/325 (52%), Gaps = 2/325 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P + +    ++ L     +D+AL   K+M + +I  NV   N ++   CK  
Sbjct: 211 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYK 270

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A ++F  ME+ G  P V TYN+LIS  CN G  S A +  + M +  I PNV+TFN
Sbjct: 271 HMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFN 330

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI  F K+GKL EA ++F EM   ++ PN+VTYN+LING+      +    ++  M+  
Sbjct: 331 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 390

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D++TYN LI G CK  + ++   L +++ +  LV N  TY+ LI G     + + A
Sbjct: 391 DCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 450

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYS 516
            +++K M+  G  P+   + +L+   C+    ++A  V+ E L+K  M P+    + +  
Sbjct: 451 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-VVFEYLQKSKMEPNIYTYNIMIE 509

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G+   GK E    LF  + ++G+ P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKP 534



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 174/364 (47%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+   A     QM + G+ P   + N  +  L    +   A+     M    
Sbjct: 157 LLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG 216

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+++T   V++  CK G I+ A+ + K ME      +V  YNT+I G C    +  A 
Sbjct: 217 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAF 276

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              N ME  GI+P+V T+N+LI   C  G+  +A+R+ S+M    ++PNVVT+N+LI+ +
Sbjct: 277 DLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAF 336

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       L++EM++  I  +I+TYN+LI G C   +  +A  +   +     +P+ 
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M + G   N   +  L+    Q  D D A ++  +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + PD I  S L  GL   GK E A+ +F  ++   + P  +     I    + G+
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516

Query: 559 KESG 562
            E G
Sbjct: 517 VEDG 520



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 175/368 (47%), Gaps = 35/368 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A   F +M      P I   +K LS++    + D+ +   ++M+   I  N YT +
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+   +  A+ V   M  +G+ P + T ++L++G+C+   +S A+   + M + 
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 328 GIQPNVITFNTLIF-----------------------------------GFCKKGKLHEA 352
           G +P+ +TFNTLI                                    G CK+G +  A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  +M+   +  NVV YNT+I+G  +  + +    L+ +M   GIK D+ TYN+LI  
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G+   A+ L+ D+ +  + PN  T+++LI           A +L+  MI+    PN
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L++ FC ++  D A ++   M+ K   PD +  + L  G     + E  M+LFR
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 533 KMEIRGLL 540
           +M  RGL+
Sbjct: 421 EMSQRGLV 428



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 168/350 (48%), Gaps = 6/350 (1%)

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D+FDL +K+        +        ++ L     +  ++ +A+     M +    P + 
Sbjct: 274 DAFDLFNKM------ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + N  + +     ++  A   + EM +  I PN+ T N +++ FC    ++ A ++F  M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            S   +P V TYNTLI G C    +   M+    M + G+  N +T+NTLI G  + G  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A +IF +M +  V P+++TY+ L++G  + G  E    ++E + ++ ++ +I TYN +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G+CK GK +    L   L    + PN   Y+ +I+G C +   E A  L++ M   G 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            P+   +  L+    ++ D   +AE++ EM       D+  +S + + LH
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLH 617



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 154/299 (51%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   + ++ A  K+   +  + + + M+++G   +  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            L++  C +  L LA+     M K G +P+++T ++L+ G+C   ++ EA  +  +M   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P+ VT+NTLI+G      +    +L + M+  G + D+ TY  ++ GLCK G    A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K ++K  +  N   Y+ +I G C  K+ + AF L+  M   G +P+   +  L+S 
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C    +  A+ +L +M+E+ + P+ +  + L       GK   A KLF +M  R + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 106/222 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++I F+ L+    K  K      +  +M+   +  N  TY+ L+N + +     +  ++
Sbjct: 79  PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCRRSQLPLALAV 138

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + DI+T ++L+ G C   +  +A  LV  + +    P+  T++ LI G  +
Sbjct: 139 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFL 198

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M+  GC+P+   +  +++  C+  D D A  +L +M +  +  + +I
Sbjct: 199 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVI 258

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            + +  GL      + A  LF KME +G+ P  F     I+C
Sbjct: 259 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 73/172 (42%)

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             +L+ EM+++     I+ ++ L+  + K  K      L + +    +  N  TYS L+ 
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLN 124

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C R     A  +   M++ G  P+      L++ +C  +    A  ++ +M+E    P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKP 184

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           D++  + L  GL    K   A+ L  +M  RG  P  F     +N   + G+
Sbjct: 185 DTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 236


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 219/472 (46%), Gaps = 31/472 (6%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD----------- 170
           ++L  F W ++      +      +L IL +N   +S+  ++  +++++           
Sbjct: 97  MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGG 156

Query: 171 --SFDLPSKLFDSILYSYR---MCDSSPLVFDLLFKT---------------YAHRKKFR 210
             S ++  K+ D +++ Y    M +    VFD + K+                  +    
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + +  M ++G  P I + N  L S     +V   L    EM+R   +PN  T N+++
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +   K G  E+A  +   M   G   S  TYN LI G+ NKG+L+ A+  +  M   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P V T+N+ I+G CK G++ +A +  S+M A N+ P+VV+YNTLI GY ++GN      L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++E+    +   I+TYN L+ GLC++G+ + A  L  ++    + P+  TY+ L+ G C 
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             +   A + +  M+  G   + + +   +    +  D  RA  +  EML K   PD II
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + +  GL   G  E A +L +KM   G++P        I+   ENG    G
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 204/426 (47%), Gaps = 18/426 (4%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNR---KFKSSESILRGILDSDSFDLPSKLFD 180
           L+   WV + K     +E    V   + K+R     K+   ILR + D D       L  
Sbjct: 167 LDLLIWVYSKKS---MVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD-------LMS 216

Query: 181 SILYSYRMCDS-----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
             +  YR         + + ++ L  +Y    K +   D   +M+  G  P   + N  +
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L      + A G   EM +  +  + YT N +++ +   G++  A+ + + M   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V TYN+ I G C  G +S AM+  + M  N + P+V+++NTLI+G+C+ G L +A  +
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F E+++  + P +VTYNTL++G  + G  E+   L  EM+  GI  DI+TY  L+ G CK
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G    A     ++    L  ++  Y+  I G+    ++ RAF L + M+  G  P+  I
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +++   C+  + + A+E+L +M+   + PD +  + +       G+     ++F +M 
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576

Query: 536 IRGLLP 541
            +GL P
Sbjct: 577 SKGLTP 582



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + +++L    + + +F  A     +M   G      + N  +    +   +  
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   +EM     SP V T N  ++  CKLG +  A++   +M +   +P V +YNTLI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G L  A    + +    + P ++T+NTL+ G C++G+L  A ++  EM    ++P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VTY  L+NG  ++G+  M    ++EML  G+++D   Y   I+G  K G T +A  L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++      P+   Y+ ++ G C   N E A +L + M+  G  P+   +  ++    +N
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN 562

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +  E+  EML K + P  +  + L  G    G+ E A   F +M+ +G+LP
Sbjct: 563 GRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 200/410 (48%), Gaps = 18/410 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++++++ L+K  +F+ ++ ++  +L +              Y+Y     +PL++     
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTG--------LKVSAYTY-----NPLIYG---- 313

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y ++     A     +M   G  P + + N F+  L    R+  A+    +M  N + P
Sbjct: 314 -YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V + N +++ +C+LG + +A  +F  + S+   P++ TYNTL+ G C +G L +A + K
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   GI P+++T+  L+ G CK G L  A   F EM    +  +   Y T I G  ++
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++    SL EEML  G   D++ YN ++ GLCK G  ++A+ L++ +  + ++P+  TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +++I          +  +++  M+  G  P+   + +L+         +RA     EM E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           K + P+ I  + L +GL    + + A   F +M  +G+ P  +     IN
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 3/329 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y        A   F ++R     P I + N  L  L     +++A     EM 
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I+P++ T  ++++  CK+G +  A E F  M   G       Y T I G    G  S
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A   +  M   G  P++I +N ++ G CK G L EA+ +  +M +  V P+ VTY ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G    G  ++ EML  G+   ++TY  LI G   +G+ ++A     ++ +  ++
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY++LI G C  +  ++A+  +  M+  G  PNK+ + +L++  C   ++  A  +
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKD 524
             +ML++ + PDS   S L   L   GKD
Sbjct: 677 YKQMLDRGVQPDSCTHSAL---LKQLGKD 702



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 129/262 (49%), Gaps = 8/262 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC---Q 218
           ++ G     S  +  + FD +L+     DS      ++ +      K  + +  F    +
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGEL-----KLGDTSRAFSLQEE 504

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   GF P +   N  +  L     ++ A    ++M  + + P+  T   ++HA  + G 
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           + +  E+F  M S G  PSV TY  LI GH  KG L  A  + + M++ GI PNVIT+N+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK  ++ +A   F+EM    + PN  +Y  LIN    +GN +   SLY++ML  G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 399 IKVDILTYNALILGLCKEGKTK 420
           ++ D  T++AL+  L K+ K +
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQ 706


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 167/316 (52%), Gaps = 2/316 (0%)

Query: 228 IESCNKFLSSLLDSERVDI--ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           ++ C   L  ++    V++  +  FY E+  +   PN +  N++MH FCK+G +  A  V
Sbjct: 105 VQGCENLLRRVVRLRPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLV 164

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +   G  P+V ++NTLISG C  G +    + K +ME   + P+V TF+ LI G CK
Sbjct: 165 FDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCK 224

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G+L E + +F EM    + PN VT+  LI+G  + G  ++    ++ ML  G++ D++T
Sbjct: 225 EGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVT 284

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YNALI GLCK G  K+A  LV ++  + L P+  T++ LI G C   + E A ++ + M+
Sbjct: 285 YNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMV 344

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G   +   F +L+S  C++     A  +L +ML     PD    + +       G   
Sbjct: 345 EEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVX 404

Query: 526 LAMKLFRKMEIRGLLP 541
           +  KL ++M+  G +P
Sbjct: 405 MGFKLLKEMQSDGHVP 420



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 160/322 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +       +A   F ++   G  P + S N  +S    +  V+        M 
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             R+ P+V+T + +++  CK G ++    +F  M   G +P+  T+  LI G C  G + 
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+K   +M   G++P+++T+N LI G CK G L EA R+ +EM A+ + P+ +T+ TLI
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G+ E    +   M+  GI++D + +  LI GLC++G+   A  +++D+      
Sbjct: 325 DGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFK 384

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ ++   C + N    F+L K M   G  P    +  LM+  C+      A  +
Sbjct: 385 PDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKML 444

Query: 496 LLEMLEKCMAPDSIILSELYSG 517
           L  ML   +AP+ I  + L  G
Sbjct: 445 LDAMLNVGVAPNDITYNILLEG 466



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 142/284 (50%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +ER+   +  +   G+ P+   +N L+ G C  G +  A    + + K G++P V++FNT
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK G + E  R+   M++  V P+V T++ LING  + G  + G+ L++EM   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  + +T+  LI G CK GK   A    + +    + P+  TY+ALI G C   + + A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L   M  SG RP++  F  L+   C+  D + A E+   M+E+ +  D +  + L SGL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
              G+   A ++ R M   G  P        ++C  + G    G
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMG 406



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 135/305 (44%), Gaps = 49/305 (16%)

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            ++ S R+C      F  L        +    +  F +M   G +P   +    +     
Sbjct: 201 GVMESERVC-PDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             +VD+AL  ++ M    + P++ T N +++  CK+G ++ A  +   M + G  P   T
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR------ 354
           + TLI G C  G +  A++ K  M + GI+ + + F  LI G C+ G++H+A R      
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 355 -----------------------------IFSEMKATNVSPNVVTYNTLINGY---GQVG 382
                                        +  EM++    P VVTYN L+NG    GQV 
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL--DKNSLVPNAST 440
           N++M   L + ML  G+  + +TYN L+     EG +K  + +  D+   +  LV + ++
Sbjct: 440 NAKM---LLDAMLNVGVAPNDITYNILL-----EGHSKHGSSVDVDIFNSEKGLVKDYAS 491

Query: 441 YSALI 445
           Y+AL+
Sbjct: 492 YTALV 496



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 100/215 (46%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +L  +   + E+  +   PN   +N L++G+ +VG       +++E+ + G++  ++++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G CK G  ++   L   ++   + P+  T+SALI G C     +    L+  M   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   F +L+   C+    D A +    ML + + PD +  + L +GL   G  + A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            +L  +M   GL P        I+   + G+ ES 
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESA 336



 Score = 42.4 bits (98), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 47/110 (42%)

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           ER++  Y  ++ SG  PN   F +LM  FC+      A  V  E+ ++ + P  +  + L
Sbjct: 124 ERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTL 183

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
            SG    G  E   +L   ME   + P  F     IN   + G  + G L
Sbjct: 184 ISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSL 233


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 182/369 (49%), Gaps = 9/369 (2%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSE 242
           S R C  + + + +L        +   A +   +M  +    LP I + N FL  L    
Sbjct: 99  SSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 158

Query: 243 RVDIALGFYKEMRRN--RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
               A    + +R    R+SP+  T + ++   CK G I+ A  VF +M + G++P+V T
Sbjct: 159 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVIT 218

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN L++G C    +  A      M   G+ P+VIT++ L+  FCK  ++ EA  +   M 
Sbjct: 219 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 278

Query: 361 ATNVSPNV-----VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +   +PNV     VT+N LI G  + GN E  ++L+EEM+   ++ D++T+ ALI GLCK
Sbjct: 279 SRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 338

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+ + A  ++  +    + PN  TY+AL+ G C     E A Q  + M+ SGC P+   
Sbjct: 339 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 398

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+   C+    D A +++ E+      PD++  + L  GL   GK E A+ +  +M 
Sbjct: 399 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458

Query: 536 IRGLLPKGF 544
            +G  P  F
Sbjct: 459 GKGHQPDSF 467



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 161/313 (51%), Gaps = 5/313 (1%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L    ++D A   + +M      PNV T N +++  CK   +ERA  + ++M   G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV-----ITFNTLIFGFCKKGK 348
             P V TY+ L+   C    +  A++  + M   G  PNV     +TFN LI G CK G 
Sbjct: 247 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN 306

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             +A+ +F EM A N+ P+V+T+  LI+G  + G  E    + + M   G+  +++TYNA
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GLCK G+ ++A   ++++  +  VP++ TY +L+   C    ++ A QL   +   G
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   + +L+    ++   ++A  VL EM+ K   PDS   +  +SGLH  G     M
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTM 486

Query: 529 KLFRKMEIRGLLP 541
           +L R +  +G+LP
Sbjct: 487 ELLRVVLAKGMLP 499



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 154/285 (54%), Gaps = 7/285 (2%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKN-MESMGFIPSVTTYNTLISGHCNKGLLSLAMK-F 320
           V   N+V+ + C+ G   RA+E+F+  M   G  P++ TYNT+I+G C    L   M+ F
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           + L+E+ G  P+V+T+NTLI   CK G L EA R+  +M +    PNVVTY+ LING  +
Sbjct: 61  EELVER-GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119

Query: 381 VGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKNSL--VP 436
           VG  +    L +EM R    V  +I+TYN+ + GLCK+  T +A  L++ L   SL   P
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  T+S LI G C     + A  ++  MI  G  PN   +  L++  C+ +  +RA  ++
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             M++K + PD I  S L        + + A++L   M  RG  P
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 284



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 156/304 (51%), Gaps = 15/304 (4%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F  EM R+ ++P + T N +++  CK   +   +E+F+ +   G  P V TYNTLI   C
Sbjct: 24  FRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLC 83

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM--KATNVSPN 367
             G L  A +    M   G  PNV+T++ LI G CK G++ EA  +  EM  K+ +V PN
Sbjct: 84  KAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN 143

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEM--LRNG---IKVDILTYNALILGLCKEGKTKKA 422
           ++TYN+ ++G  +     M A   E M  LR+G   +  D +T++ LI GLCK G+  +A
Sbjct: 144 IITYNSFLDGLCK---QSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEA 200

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  D+     VPN  TY+AL+ G C     ERA  + +SM+  G  P+   + +L+  
Sbjct: 201 CSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDA 260

Query: 483 FCQNEDFDRAAEVLLEMLEK-----CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           FC+    D A E+L  M  +      + PD +  + L +G    G  E A  LF +M  +
Sbjct: 261 FCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320

Query: 538 GLLP 541
            L P
Sbjct: 321 NLQP 324



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 172/333 (51%), Gaps = 9/333 (2%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P I + N  ++ L  S  +   +  ++E+      P+V T N ++ + CK G
Sbjct: 27  EMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAG 86

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVIT 335
            +E A  +  +M S G +P+V TY+ LI+G C  G +  A +    M +    + PN+IT
Sbjct: 87  DLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIIT 146

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMK--ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +N+ + G CK+    EA  +   ++  +  VSP+ VT++TLI+G  + G  +   S++++
Sbjct: 147 YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDD 206

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+  G   +++TYNAL+ GLCK  K ++A  +++ +    + P+  TYS L+   C    
Sbjct: 207 MIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 266

Query: 454 SERAFQLYKSMIRSGCRPN-----KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            + A +L   M   GC PN     K  F +L++  C+  +F++A+ +  EM+ K + PD 
Sbjct: 267 VDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 326

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    L  GL   G+ E A  +   M   G+ P
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 170/335 (50%), Gaps = 9/335 (2%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F ++ + G  P + + N  + SL  +  ++ A   + +M      PNV T +++++  CK
Sbjct: 60  FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119

Query: 276 LGIIERAVEVFKNM--ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQP 331
           +G I+ A E+ + M  +S   +P++ TYN+ + G C + + + A +    +      + P
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSP 179

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + +TF+TLI G CK G++ EA  +F +M A    PNV+TYN L+NG  +    E   ++ 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK-----NSLVPNASTYSALIT 446
           E M+  G+  D++TY+ L+   CK  +  +A  L+  +       N LVP+  T++ LI 
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C   N E+A  L++ M+    +P+   F  L+   C+    + A ++L  M    + P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  + L  GL   G+ E A +   +M   G +P
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 169/348 (48%), Gaps = 7/348 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A   F  M   G++P + + N  ++ L  +++++ A    + 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV-----TTYNTLISGH 308
           M    ++P+V T ++++ AFCK   ++ A+E+   M S G  P+V      T+N LI+G 
Sbjct: 242 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGA 301

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G    A   F+ ++ KN +QP+V+TF  LI G CK G++  A  I   M    V PN
Sbjct: 302 CKAGNFEQASALFEEMVAKN-LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN L++G  + G  E      EEM+ +G   D +TY +L+  LC+  +T  A  LV 
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +L      P+  TY+ L+ G      +E+A  + + M+  G +P+   F    S   ++ 
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSG 480

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +     E+L  +L K M PD+   S +   +   GK +    + ++ E
Sbjct: 481 NLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 186/382 (48%), Gaps = 2/382 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +ILR + DS       ++ D +L   R C    + + +L +          A     +MR
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR 266

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + + N  ++ +    R+D A+ F  +M  +   PNV T N+++ + C  G   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  +M   GF PSV T+N LI+  C KGLL  A+     M K+G QPN +++N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK+ K+  A      M +    P++VTYNT++    + G  E    +  ++   G  
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I GL K GKT KA  L+ ++    L P+  TYS+L+ G       + A + 
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +    R G RPN   F  +M   C+    DRA + L+ M+ +   P     + L  GL +
Sbjct: 507 FHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAY 566

Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
            G  + A++L  ++  +GL+ +
Sbjct: 567 EGMAKEALELLNELCNKGLMKR 588



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 185/379 (48%), Gaps = 5/379 (1%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR ++ +   +   K  ++++Y   + D  P     L + +    K R A      +   
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCT--TLIRGFCRMGKTRKAAKILEVLEGS 166

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + + N  +S    +  ++ AL     M    +SP+V T N ++ + C  G +++A
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQA 223

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +EV   M      P V TY  LI   C    +  AMK  + M   G  P+V+T+N L+ G
Sbjct: 224 MEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNG 283

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G+L EA +  ++M ++   PNV+T+N ++      G       L  +MLR G    
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+N LI  LC++G   +A  +++ + K+   PN+ +Y+ L+ G C  K  +RA +  +
Sbjct: 344 VVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 403

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC P+   +  +++  C++   + A E+L ++  K  +P  I  + +  GL   G
Sbjct: 404 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 463

Query: 523 KDELAMKLFRKMEIRGLLP 541
           K   A+KL  +M  + L P
Sbjct: 464 KTGKAIKLLDEMRAKDLKP 482



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++   Y    +  NA     +M      P + + N  L SL DS ++  A+     
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +    P+V T  +++ A C+   + +A+++   M   G  P V TYN L++G C +G 
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+KF N M  +G QPNVIT N ++   C  G+  +A ++ ++M     SP+VVT+N 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   + G       + E+M ++G + + L+YN L+ G CKE K  +A   ++ +    
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ ++T  C     E A ++   +   GC P    +  ++    +     +A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L EM  K + PD+I  S L  GL   GK + A+K F + E  G+ P
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRP 517



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L         D+  K F            S + F++L  
Sbjct: 311 THNIILRSMCSTGRWMDAEKLL--------ADMLRKGFSP----------SVVTFNILIN 352

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ + + M      P
Sbjct: 353 FLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G +E AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M    ++P+ IT+++L+ G  ++GK+ EA + F E +   V PN VT+N+++ G  + 
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKT 532

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             ++        M+  G K    +Y  LI GL  EG  K+A  L+ +L    L+  +S 
Sbjct: 533 RQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSA 591


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 219/472 (46%), Gaps = 31/472 (6%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD----------- 170
           ++L  F W ++      +      +L IL +N   +S+  ++  +++++           
Sbjct: 97  MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGG 156

Query: 171 --SFDLPSKLFDSILYSYR---MCDSSPLVFDLLFKT---------------YAHRKKFR 210
             S ++  K+ D +++ Y    M +    VFD + K+                  +    
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + +  M ++G  P I + N  L S     +V   L    EM+R   +PN  T N+++
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +   K G  E+A  +   M   G   S  TYN LI G+ NKG+L+ A+  +  M   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P V T+N+ I+G CK G++ +A +  S+M A N+ P+VV+YNTLI GY ++GN      L
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++E+    +   I+TYN L+ GLC++G+ + A  L  ++    + P+  TY+ L+ G C 
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             +   A + +  M+  G   + + +   +    +  D  RA  +  EML K   PD II
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + +  GL   G  E A +L +KM   G++P        I+   ENG    G
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKG 568



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 204/426 (47%), Gaps = 18/426 (4%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNR---KFKSSESILRGILDSDSFDLPSKLFD 180
           L+   WV + K     +E    V   + K+R     K+   ILR + D D       L  
Sbjct: 167 LDLLIWVYSKKS---MVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKD-------LMS 216

Query: 181 SILYSYRMCDS-----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
             +  YR         + + ++ L  +Y    K +   D   +M+  G  P   + N  +
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L      + A G   EM +  +  + YT N +++ +   G++  A+ + + M   G  
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS 336

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V TYN+ I G C  G +S AM+  + M  N + P+V+++NTLI+G+C+ G L +A  +
Sbjct: 337 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 396

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F E+++  + P +VTYNTL++G  + G  E+   L  EM+  GI  DI+TY  L+ G CK
Sbjct: 397 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 456

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G    A     ++    L  ++  Y+  I G+    ++ RAF L + M+  G  P+  I
Sbjct: 457 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 516

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +++   C+  + + A+E+L +M+   + PD +  + +       G+     ++F +M 
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576

Query: 536 IRGLLP 541
            +GL P
Sbjct: 577 SKGLTP 582



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 173/355 (48%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + +++L    + + +F  A     +M   G      + N  +    +   +  
Sbjct: 263 RGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAE 322

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   +EM     SP V T N  ++  CKLG +  A++   +M +   +P V +YNTLI 
Sbjct: 323 ALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIY 382

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G L  A    + +    + P ++T+NTL+ G C++G+L  A ++  EM    ++P
Sbjct: 383 GYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAP 442

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VTY  L+NG  ++G+  M    ++EML  G+++D   Y   I+G  K G T +A  L 
Sbjct: 443 DIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQ 502

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++      P+   Y+ ++ G C   N E A +L + M+  G  P+   +  ++    +N
Sbjct: 503 EEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLEN 562

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +  E+  EML K + P  +  + L  G    G+ E A   F +M+ +G+LP
Sbjct: 563 GRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILP 617



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 200/410 (48%), Gaps = 18/410 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++++++ L+K  +F+ ++ ++  +L +              Y+Y     +PL++     
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTG--------LKVSAYTY-----NPLIYG---- 313

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y ++     A     +M   G  P + + N F+  L    R+  A+    +M  N + P
Sbjct: 314 -YFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLP 372

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V + N +++ +C+LG + +A  +F  + S+   P++ TYNTL+ G C +G L +A + K
Sbjct: 373 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 432

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   GI P+++T+  L+ G CK G L  A   F EM    +  +   Y T I G  ++
Sbjct: 433 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 492

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G++    SL EEML  G   D++ YN ++ GLCK G  ++A+ L++ +  + ++P+  TY
Sbjct: 493 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +++I          +  +++  M+  G  P+   + +L+         +RA     EM E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           K + P+ I  + L +GL    + + A   F +M  +G+ P  +     IN
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILIN 662



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 164/340 (48%), Gaps = 4/340 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y        A   F ++R     P I + N  L  L     +++A     EM 
Sbjct: 377 YNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I+P++ T  ++++  CK+G +  A E F  M   G       Y T I G    G  S
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A   +  M   G  P++I +N ++ G CK G L EA+ +  +M +  V P+ VTY ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G    G  ++ EML  G+   ++TY  LI G   +G+ ++A     ++ +  ++
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY++LI G C  +  ++A+  +  M+  G  PNK+ + +L++  C   ++  A  +
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
             +ML++ + PDS   S L   L   GKD   ++  R++E
Sbjct: 677 YKQMLDRGVQPDSCTHSAL---LKQLGKD-CKLQAVRQLE 712



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/213 (34%), Positives = 112/213 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P +   N  +  L     ++ A    ++M  + + P+  T   ++HA  + G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +  E+F  M S G  PSV TY  LI GH  KG L  A  + + M++ GI PNVIT+N
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G CK  ++ +A   F+EM    + PN  +Y  LIN    +GN +   SLY++ML  
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           G++ D  T++AL+  L K+ K +    L   LD
Sbjct: 684 GVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 88/187 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++++            A++   +M   G +P   +    + + L++ R+      + E
Sbjct: 515 IIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYE 574

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+V T  +++H     G +ERA   F  M+  G +P+V TYN+LI+G C    
Sbjct: 575 MLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRR 634

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A  F   M + GI PN  ++  LI   C  G   EA  ++ +M    V P+  T++ 
Sbjct: 635 MDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSA 694

Query: 374 LINGYGQ 380
           L+   G+
Sbjct: 695 LLKQLGK 701



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 68/150 (45%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R   + F +M   G  P + +    +       R++ A  ++ EM+   I PNV T N
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++  CK+  +++A   F  M   G  P+  +Y  LI+ +CN G    A+     M   
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           G+QP+  T + L+    K  KL    ++ S
Sbjct: 684 GVQPDSCTHSALLKQLGKDCKLQAVRQLES 713


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 170/350 (48%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V D+L  TY      R A      M D G  P    CN  L  LL ++ +++       M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               I P+VYT +  + A CK    + A +VF+ M       +  TYN +ISG C  G +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A  FK  M   G+ P+  T+  L+ G CK G+L EA  +  EM  + + PNVV Y TL
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++G+ + G +     +  EM+  G++ + + Y+ LI GLCK G+  +A+ L+ ++ K   
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY  L+ G     + + AF+L   M  SG  PN + + ++++  CQN +   A  
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +L EM+ + + P++ + + L  G    G   LA +    M    +LP  F
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLF 526



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 176/416 (42%), Gaps = 70/416 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +    + +   + F  A   F +MR         + N  +S L  S  V+ A GF +EM 
Sbjct: 248 YSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV 307

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SP+ +T   +M+  CK G ++ A  +   M   G  P+V  Y TL+ G   +G  +
Sbjct: 308 DYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAA 367

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM---------------- 359
            A    N M   G+QPN I ++ LI G CK G+L  A+++ +EM                
Sbjct: 368 EAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLM 427

Query: 360 -------------------KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                              + + + PN  TY  +ING  Q G S+   +L EEM+  G+K
Sbjct: 428 QGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLK 487

Query: 401 -----------------------------------VDILTYNALILGLCKEGKTKKAAYL 425
                                               D+  YN+LI GL   G+ ++A   
Sbjct: 488 PNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEY 547

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + K  LVP+  TYS LI G C  +N E+A QL + M+ SG +PN   +  L+  + +
Sbjct: 548 YAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFK 607

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + D ++ + +L  ML     PD+ I   +   L      E+A  +  ++E  GL+P
Sbjct: 608 SNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 663



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 3/302 (0%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
            L++++  + K G +  A +V   M  +G  P+    N L+        + L  K K  M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           E  GI P+V T++T +   CK      A ++F EM+  + + N VTYN +I+G  + G  
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E      EEM+  G+  D  TY AL+ GLCK G+ K+A  L+ ++  + L PN   Y+ L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G      +  AF +   MI +G +PNK +++ L+   C+     RA+++L EM++   
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 505 APDSIILSELYSG-LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE-KESG 562
            PD+     L  G   H  KD  A +L  +M   G+LP  +     IN   +NGE KE+G
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDG-AFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 563 GL 564
            L
Sbjct: 476 NL 477



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 179/385 (46%), Gaps = 2/385 (0%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++++RG+         SKL + ++      D+    +  L + +        A +   +M
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT--FTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R+ G LP   +    ++ L  +     A    +EM    + PN +    ++    K G I
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E  +NM     +P +  YN+LI G    G +  A ++   ++K G+ P+  T++ L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+CK   L +A+++  +M  + + PN  TY  L+ GY +  + E  +S+ + ML +G 
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K D   Y  +I  L +    + A  ++ +++KN LVP+   YS+LI+G C   + E+A  
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M + G  P    +  L+  FC++ D  RA  V   +L K + P+ +  + L  G  
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G    A  L++ M  RG+ P  F
Sbjct: 747 KNGDITDAFDLYKDMLDRGIAPDAF 771



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 159/348 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+  L   +    K   A D   +M   G  P     +  +  L    ++  A     E
Sbjct: 351 VVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNE 410

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +    P+ +T + +M    +    + A E+   M + G +P+  TY  +I+G C  G 
Sbjct: 411 MIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGE 470

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A      M   G++PN   +  LI G  K+G +  A      M   NV P++  YN+
Sbjct: 471 SKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNS 530

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G   VG  E     Y ++ + G+  D  TY+ LI G CK    +KA  L++ +  + 
Sbjct: 531 LIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSG 590

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PNA TY+ L+ G     + E+   + +SM+ SG +P+ HI+ +++    ++E+ + A 
Sbjct: 591 LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            VL E+ +  + PD  I S L SGL      E A+ L  +M   GL P
Sbjct: 651 MVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEP 698



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 166/359 (46%), Gaps = 36/359 (10%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A ++   M     LP +   N  +  L    R++ A  +Y ++++  + P+ +T + ++H
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN-----------KGLLSLAMK- 319
            +CK   +E+A ++ + M + G  P+  TY  L+ G+             + +L    K 
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628

Query: 320 --------FKNL---------------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
                    +NL               +EKNG+ P++  +++LI G CK   + +A  + 
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM    + P +V YN LI+G+ + G+     ++++ +L  G+  + +TY ALI G CK 
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G    A  L KD+    + P+A  Y+ L TG     + E+A  L + M   G   +  +F
Sbjct: 749 GDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLF 807

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
             L+  FC+        ++L  M+++ + P++  +  + +     GK   A ++F +++
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQ 866



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 132/304 (43%), Gaps = 1/304 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y   +    A     QM + G  P  ++    L     S   +      + M  + 
Sbjct: 566 LIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSG 625

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+ +   +V+    +   +E A  V   +E  G +P +  Y++LISG C    +  A+
Sbjct: 626 DKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAV 685

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M K G++P ++ +N LI GFC+ G +  A  +F  + A  + PN VTY  LI+G 
Sbjct: 686 GLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGN 745

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+      LY++ML  GI  D   YN L  G       ++A +L +++  N    + 
Sbjct: 746 CKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM-FNRGYAHV 804

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S +S L+ G C R   +   +L   M+     PN    E +++ F +      A  V  E
Sbjct: 805 SLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAE 864

Query: 499 MLEK 502
           + +K
Sbjct: 865 LQQK 868



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 143/324 (44%), Gaps = 24/324 (7%)

Query: 125 EFFTWVQTHK--PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           E++  VQ     P   T   +S ++H   K R  + ++ +L+ +L+S      +  +  +
Sbjct: 546 EYYAQVQKRGLVPDEFT---YSGLIHGYCKTRNLEKADQLLQQMLNS-GLKPNADTYTDL 601

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L  Y             FK+  H K     +     M   G  P        + +L  SE
Sbjct: 602 LEGY-------------FKSNDHEK----VSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 644

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +++A     E+ +N + P+++  + ++   CK+  +E+AV +   M   G  P +  YN
Sbjct: 645 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYN 704

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI G C  G +S A    + +   G+ PN +T+  LI G CK G + +A  ++ +M   
Sbjct: 705 ALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDR 764

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            ++P+   YN L  G     + E    L EEM   G    +  ++ L+ G CK G+ ++ 
Sbjct: 765 GIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGFCKRGRLQET 823

Query: 423 AYLVKDLDKNSLVPNASTYSALIT 446
             L+  +    +VPNA T   +IT
Sbjct: 824 EKLLHVMMDREIVPNAQTVENVIT 847


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 2/382 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +ILR + DS       ++ D +L   R C    + + +L +         +A     +MR
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + + N  ++ +    R+D A+ F  +M  +   PNV T N+++ + C  G   
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  +M   GF PSV T+N LI+  C KGLL  A+     M ++G QPN +++N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK+ K+  A      M +    P++VTYNT++    + G  E    +  ++   G  
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I GL K GKT KA  L+ ++    L P+  TYS+L+ G       + A + 
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +    R G RPN   F  +M   C++   DRA + L+ M+ +   P+    + L  GL +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566

Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
            G  + A++L  ++  +GL+ K
Sbjct: 567 EGMAKEALELLNELCNKGLMKK 588



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 3/348 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++   Y    +  NA     +M      P + + N  L SL DS ++  A+     
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +    P+V T  +++ A C+   +  A+++   M   G  P V TYN L++G C +G 
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+KF N M  +G QPNVIT N ++   C  G+  +A ++ ++M     SP+VVT+N 
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   + G       + E+M ++G + + L+YN L+ G CKE K  +A   ++ +    
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ ++T  C     E A ++   +   GC P    +  ++    +     +A 
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L EM  K + PD+I  S L  GL   GK + A+K F + E  G+ P
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 159/317 (50%), Gaps = 4/317 (1%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           L  +ES N  L  ++ +  ++    F + M  +   P++     ++  FC+LG   +A +
Sbjct: 100 LEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + + +E  G +P V TYN +ISG+C  G ++ A+   +++++  + P+V+T+NT++   C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLC 215

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
             GKL +A  +   M   +  P+V+TY  LI    +         L +EM   G   D++
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN L+ G+CKEG+  +A   + D+  +   PN  T++ ++   C       A +L   M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +R G  P+   F +L++  C+     RA ++L +M +    P+S+  + L  G     K 
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395

Query: 525 ELAMKLFRKMEIRGLLP 541
           + A++   +M  RG  P
Sbjct: 396 DRAIEYLERMVSRGCYP 412



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L         D+  K F            S + F++L  
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLA--------DMLRKGFSP----------SVVTFNILIN 352

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ + + M      P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G +E AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M    ++P+ IT+++L+ G  ++GK+ EA + F E +   + PN VT+N+++ G  + 
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             ++        M+  G K +  +Y  LI GL  EG  K+A  L+ +L    L+  +S 
Sbjct: 533 RQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 169/326 (51%), Gaps = 14/326 (4%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LS L+   +V  A+  +KE    +  P+ +T N+++   C++G ++RA EVFK+MES
Sbjct: 147 NNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMES 206

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            G +P V TYNTLI+G C    +    + FK +  ++   P+++T+ ++I GFCK GK+ 
Sbjct: 207 FGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMK 266

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA+ +F EM  + + PNV+T+N LI+G+G++GN     ++Y +M       D++T+ +LI
Sbjct: 267 EASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLI 326

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G C+ G+          +   ++ P   TY+ LI   C       A      +  S   
Sbjct: 327 DGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLGQIKNSSII 386

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P   ++  ++  FC+  + D    +L EM EK   PD +  + L  G  HC K     ++
Sbjct: 387 PKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIG--HCVKG----RM 440

Query: 531 FRKMEIRGLLPKGFDKLRTINCAPEN 556
           F  + I       F+++    CAP+N
Sbjct: 441 FEAINI-------FNRMLATRCAPDN 459



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 115/221 (52%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I +    +S    S ++  A   ++EM R+ I PNV T N+++  F K+G I  A  +
Sbjct: 247 PDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAM 306

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           ++ M        V T+ +LI G+C  G ++  +KF N+M+   + P V T+  LI   CK
Sbjct: 307 YRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCK 366

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + +L+EA     ++K +++ P    YN +I+G+ + GN + G  + +EM       D +T
Sbjct: 367 ENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVT 426

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           +  LI+G C +G+  +A  +   +      P+  T ++LI+
Sbjct: 427 FTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLIS 467



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 17/248 (6%)

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD------SFDLPSKL 178
           E F  +Q+    S  + T++ ++    K+ K K + ++   ++ S       +F++    
Sbjct: 234 ELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDG 293

Query: 179 FDSI--------LY---SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           F  I        +Y   +Y  C +  + F  L   Y    +  +    +  M+     P 
Sbjct: 294 FGKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPT 353

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +    +++L    R++ A  F  +++ + I P  +  N V+  FCK G ++    + K
Sbjct: 354 VYTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILK 413

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            ME     P   T+  LI GHC KG +  A+   N M      P+ IT N+LI    K G
Sbjct: 414 EMEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAG 473

Query: 348 KLHEANRI 355
             +EA RI
Sbjct: 474 MPNEAYRI 481


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 181/355 (50%), Gaps = 39/355 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L SL+ S+     L   ++M    I PN+   N++++ FC+LG+I  A  VF  +  
Sbjct: 89  NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKN----------------------------- 322
           MG++P   T+ TLI G C KG +  A  F +                             
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 323 ---LMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
              L+++   N +QPNV+ +NT+I   CK   ++EA  +FSEM +  +SP+VVTY+ LI+
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +G       L+ +M+   IK D+ T+N L+   CK+GK K+   +   + K  + P
Sbjct: 269 GFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY++L+ G C+ K   +A  ++ +M + G  P+   + ++++ FC+ + FD A  + 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            EM  K + PD +  S L  GL   G+   A++L  +M  RG+ P     +RT N
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP----TIRTYN 439



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 179/349 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    K    A D F +M   G  P + + +  +S      +++ A+  + +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNK 285

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+VYT N++++AFCK G ++    VF  M   G  P+  TYN+L+ G+C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    N M + G+ P++ +++ +I GFCK  K  EA  +F EM   N+ P+VVTY++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L ++M   G+   I TYN+++  LCK  +  KA  L+  L    
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKG 465

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TYS LI G C     E A ++++ ++  G   N   + +++  FC    F+ A 
Sbjct: 466 IQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEAL 525

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +L +M +    PD+     +   L    ++++A KL R+M  RG+ P+
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPR 574



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 151/292 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +  N + PNV   N ++ + CK+ ++  A ++F  M S G  P V TY+ LIS
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L+ A+   N M    I+P+V TFN L+  FCK GK+ E   +F  M    + P
Sbjct: 269 GFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N VTYN+L++GY  V       S++  M + G+  DI +Y+ +I G CK  K  +A  L 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++ + +++P+  TYS+LI G         A QL   M   G  P    +  ++   C+ 
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKI 448

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              D+A  +L ++ +K + P+    S L  GL   GK E A K+F  + ++G
Sbjct: 449 HQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 161/316 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + S+   + V+ A   + EM    ISP+V T + ++  FC LG +  A+++
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDL 282

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P V T+N L++  C  G +       ++M K GI+PN +T+N+L+ G+C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++++A  IF+ M    V+P++ +Y+ +ING+ ++   +   +L++EM R  I  D++T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++LI GL K G+   A  LV  +    + P   TY++++   C     ++A  L   + 
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G +PN + + +L+   CQ+   + A +V   +L K    +    + +  G    G   
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ L  KME  G +P
Sbjct: 523 EALALLSKMEDNGCIP 538



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 150/299 (50%), Gaps = 5/299 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +    K +     F  M   G  P   + N  +      + V+ A   +  M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P++ + +++++ FCK+   + A+ +FK M     IP V TY++LI G    G +S
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++  + M   G+ P + T+N+++   CK  ++ +A  + +++K   + PN+ TY+ LI
Sbjct: 418 YALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILI 477

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G  Q G  E    ++E +L  G  +++ TY  +I G C EG   +A  L+  ++ N  +
Sbjct: 478 KGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCI 537

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P+A TY  +I     +  ++ A +L + MI  G RP +     +   F + +++D ++E
Sbjct: 538 PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ-----IAIWFQKKKEYDVSSE 591



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 157/341 (46%), Gaps = 8/341 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLS------SLLDSERVDIALGFYKEMRRNRIS 260
           KKF++    F +   + F+P   S   F+S      +   +  VD A+  +  + R   +
Sbjct: 25  KKFQSFQ--FLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTT 82

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P  +  N ++ +  K       + + + ME  G  P++   N LI+  C  GL+  A   
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              + K G  P+ ITF TLI G C KG++ +A     ++ A     + ++Y TLI+G  +
Sbjct: 143 FAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           VG +     L + +  N ++ +++ YN +I  +CK     +A  L  ++    + P+  T
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVT 262

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YSALI+G C+      A  L+  MI    +P+ + F +L++ FC++        V   M+
Sbjct: 263 YSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++ + P+ +  + L  G     +   A  +F  M   G+ P
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 123/271 (45%), Gaps = 4/271 (1%)

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           + FI   +T  T    H N  +      F  L+ +N   P    FN ++    K    H 
Sbjct: 48  INFISYSSTSTTF---HSNNDVDDAVSLFNRLLRRNTTPP-AFEFNKILGSLVKSKHYHT 103

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +  +M+   + PN+V  N LIN + Q+G      S++ ++L+ G   D +T+  LI 
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIK 163

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC +G+ ++A      +       +  +Y  LI G C    +  A  L + +  +  +P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N  ++  ++ + C+ +  + A ++  EM+ K ++PD +  S L SG    GK   A+ LF
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLF 283

Query: 532 RKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            KM +  + P  +     +N   ++G+ + G
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEG 314


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 175/317 (55%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP +   ++F S++  +++ ++ L F K++  N I+ N+YTLN++++ FC+      A  
Sbjct: 85  LPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +  +G+ P  TT+NTLI+G C +G +S A+   + M +NG QP+++T+N+++ G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGIC 204

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G    A  +  +M+  NV  +V TY+T+I+   + G  +   SL++EM   GIK  ++
Sbjct: 205 RSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN+L+ GLCK GK    A L+KD+    +VPN  T++ L+         + A +LYK M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I  G  PN   +  LM  +C       A  +L  M+    +PD +  + L  G     + 
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 525 ELAMKLFRKMEIRGLLP 541
           +  MK+FR +  RGL+ 
Sbjct: 385 DDGMKVFRNISKRGLVA 401



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 176/351 (50%), Gaps = 18/351 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G    + + N  +  L  + + +      K+M    I PNV T N+++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F K G ++ A E++K M + G  P++ TYNTL+ G+C +  LS A    +LM +N   P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++TF +LI G+C   ++ +  ++F  +    +  N VTY+ L+ G+ Q G  ++   L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM+ +G+  D++TY  L+ GLC  GK +KA  + +DL K+ +      Y+ +I G C  
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP----- 506
              E A+ L+ S+   G +PN   + +++S  C+      A  +L +M E   AP     
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 507 DSIILSELYSG-----------LHHCG--KDELAMKLFRKMEIRGLLPKGF 544
           +++I + L  G           +  CG   D  ++K+   M + G L K F
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 163/313 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  ++ L    +V  A+     M  N   P++ T N +++  C+ G    A
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLA 212

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++ + ME       V TY+T+I   C  G +  A+     ME  GI+ +V+T+N+L+ G
Sbjct: 213 FDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK GK ++   +  +M +  + PNV+T+N L++ + + G  +    LY+EM+  GI  +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ G C + +  +A  ++  + +N   P+  T+++LI G C+ K  +   ++++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           ++ + G   N   + +L+  FCQ+     A E+  EM+   + PD +    L  GL   G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 523 KDELAMKLFRKME 535
           K E A+++F  ++
Sbjct: 453 KLEKALEIFEDLQ 465



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 176/381 (46%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L        K   A     +M + G  P + + N  ++ +  S    +A    ++M 
Sbjct: 161 FNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKME 220

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              +  +V+T + ++ + C+ G I+ A+ +FK ME+ G   SV TYN+L+ G C  G   
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280

Query: 313 -----------------------LLSLAMKFKNLMEKN---------GIQPNVITFNTLI 340
                                  LL + +K   L E N         GI PN+IT+NTL+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C + +L EAN +   M     SP++VT+ +LI GY  V   + G  ++  + + G+ 
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TY+ L+ G C+ GK K A  L +++  + ++P+  TY  L+ G C     E+A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ + +S       ++  ++   C+    + A  +   +  K + P+ +  + + SGL  
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G    A  L RKME  G  P
Sbjct: 521 KGSLSEANILLRKMEEDGNAP 541



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 170/346 (49%), Gaps = 13/346 (3%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +ET  I   ++T N       S++RG+  +  ++  + L   ++   R    + + F++L
Sbjct: 254 METKGIKSSVVTYN-------SLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              +    K + A + + +M   G  P I + N  +       R+  A      M RN+ 
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP++ T   ++  +C +  ++  ++VF+N+   G + +  TY+ L+ G C  G + LA +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M  +G+ P+V+T+  L+ G C  GKL +A  IF +++ + +   +V Y T+I G  
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E   +L+  +   G+K +++TY  +I GLCK+G   +A  L++ ++++   PN  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPN----KHIFEMLMS 481
           TY+ LI       +   + +L + M   G   +    K + +ML+S
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 24/427 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDL 174
           +PS LT  T   +++IL+K  K + +E IL  I   D                   + DL
Sbjct: 195 QPSLLTFNT---LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
              +FD ++     CD + + +  L     +  +   A D   +M + G  P + +    
Sbjct: 252 AFGVFDRMVK--EGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +++L   E  + A+     M++    PNV T   ++    +LG +E A+ ++  M   G 
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN LI+  C  G  S A+K  + ME +G   N  T+N +I G C  G + +A  
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F +M      P VVTYNTLINGY   GN    A L + M  NG + D  TYN L+ G  
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K GK + A++  +++ +  L PN  +Y+ALI G       + A  L K M   GC PN  
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVE 549

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  +++   +   F  A ++  +M+E+ + P+ I  + L  GL   G+ + A K+F  M
Sbjct: 550 SYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609

Query: 535 EIRGLLP 541
           E R  LP
Sbjct: 610 EKRKCLP 616



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 177/355 (49%), Gaps = 4/355 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   +  L    +   K   A   + +M   G +P   + N  ++ L    R   
Sbjct: 332 RGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFST 391

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  +  M  +    N  T N ++   C  G IE+A+ +F+ M  MG +P+V TYNTLI+
Sbjct: 392 ALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLIN 451

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+  KG ++ A +  +LM++NG +P+  T+N L+ GF K GKL  A+  F EM    ++P
Sbjct: 452 GYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNP 511

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V+Y  LI+G+ + G  ++  SL + M   G   ++ +YNA+I GL KE +  +A  + 
Sbjct: 512 NPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKIC 571

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L+PN  TY+ LI G C    ++ AF+++  M +  C PN + +  L+   CQ 
Sbjct: 572 DKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQE 631

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              D A      M E    P     S L SGL   G+   A +L + M+ RG  P
Sbjct: 632 GKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCP 682



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 132/511 (25%), Positives = 212/511 (41%), Gaps = 70/511 (13%)

Query: 68  HRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLE 125
           H  +P  +      V+   + L    WK  + L       +  HV  ++ V KD    ++
Sbjct: 34  HFAVPASREPFQAIVSRVCAILSRVQWKGSSELKQLSPQLKAHHVAEIVAVHKDTESVIQ 93

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           FF W+         +     +L+ L ++R F  ++ I                       
Sbjct: 94  FFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHI----------------------- 130

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
            R+         L+ K   + ++ R   D   ++   GF   + SCN  L  L   E V+
Sbjct: 131 -RI---------LMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVE 180

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   YK+M  + I P++ T N +++   K G +  A  +   +      P V TY +LI
Sbjct: 181 GARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLI 240

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE------- 358
            GHC    L LA    + M K G  PN +T++TLI G C +G++ EA  +  E       
Sbjct: 241 LGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIE 300

Query: 359 ----------------------------MKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
                                       MK     PNV TY  LI+G  ++G  E+   L
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y +ML+ G+  + +TYNALI  LC  G+   A  +   ++ +  + N  TY+ +I G C+
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             + E+A  L++ M++ G  P    +  L++ +    + + AA +L  M E    PD   
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +EL SG    GK E A   F++M   GL P
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNP 511



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 201/428 (46%), Gaps = 23/428 (5%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           L V   +  +L+ F W++ H   + T                 ++   I++G+      +
Sbjct: 383 LCVGGRFSTALKIFHWMEGHGSLANT-----------------QTYNEIIKGLCLGGDIE 425

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF+ +L    +   + + ++ L   Y  +    NA      M++ G  P   + N+
Sbjct: 426 KAMVLFEKMLKMGPL--PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNE 483

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +S      +++ A  +++EM    ++PN  +   ++    K G ++ A+ + K ME MG
Sbjct: 484 LVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMG 543

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V +YN +I+G   +   S A K  + M + G+ PNVIT+ TLI G C+ G+   A 
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           +IF +M+     PN+ TY++LI G  Q G ++      E M   G +  + TY+ L+ GL
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C++G+  +A  LVKD+ +    P+   Y +L+   C     + A +++ S+   G + + 
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            I+  L+   C+    + A  +   MLEK    D I+ + L  GL   G+ +L MKL   
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779

Query: 534 MEIRGLLP 541
           ME +   P
Sbjct: 780 MESKNFTP 787



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 143/350 (40%), Gaps = 33/350 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G L   + +  ++L D  L     C+     ++ L   ++   K  +A+  F +M 
Sbjct: 448 TLINGYLTKGNVNNAARLLD--LMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   S    +       +VDIAL   K M     +PNV + N V++   K     
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN------------- 327
            A ++   M   G +P+V TY TLI G C  G    A K  + MEK              
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625

Query: 328 ------------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
                             G +P + T++TL+ G C+KG+ +EA ++  +MK     P+  
Sbjct: 626 YGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y +L+  + +    +    ++  +   G ++ +  Y ALI  LCK G+ ++A  L  ++
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +     +   ++ L+ G       +   +L   M      PN   + +L
Sbjct: 746 LEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/276 (21%), Positives = 112/276 (40%), Gaps = 39/276 (14%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   ++ +    +   +F  A     +M + G LP + +    +  L  + R   A 
Sbjct: 544 CNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAF 603

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M + +  PN+YT + +++  C+ G  + A    + M  +G  P++ TY+TL+SG 
Sbjct: 604 KIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGL 659

Query: 309 CNKGLLSLAMKF------------------------KNL-----------MEKNGIQPNV 333
           C KG    A +                         KNL           +E  G Q ++
Sbjct: 660 CRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHL 719

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
             +  LI   CK G++ EA  +F  M     + + + +  L++G  + G  ++   L   
Sbjct: 720 SIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHI 779

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           M       +I TY  L   L + GK+ ++  L   L
Sbjct: 780 MESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 70/173 (40%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L      + +F  A      M++ GF P  E     L +   +  VD AL
Sbjct: 645 CEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHAL 704

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  +       ++     ++ A CK G +E A  +F NM    +      +  L+ G 
Sbjct: 705 KIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGL 764

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             +G L L MK  ++ME     PN+ T+  L     + GK  E+  +  ++K 
Sbjct: 765 LKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLKV 817


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/325 (34%), Positives = 172/325 (52%), Gaps = 6/325 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR +GF P   + N  LS L +  R+  A   Y+ M +   SP+V T N ++H FCK+G 
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+++F      GF+P V TYN LI+G C    L  A +    M    + P+V+T+N+
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV--GNSEMGASLYEEMLR 396
           L+ G CK G++ EA  +  +      SPNV+TY+TLI+G  +   G SE    L+  +L+
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSE-ALKLFGSVLK 176

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G + ++ TYN LI GL KE +  +A  L   L K+ L P+A TY+  I G C     E 
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  + K M   GC P+      +++  C+ +  D A  +L  M  K  +P++I  + L  
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G    GK + AM  F++M  RG+ P
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKP 321



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 178/353 (50%), Gaps = 9/353 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    +   A   F      GF+P + + N  ++    ++++D A    + 
Sbjct: 46  VTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQR 105

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN--K 311
           M    + P+V T N +++  CK G ++ A  +  +    GF P+V TY+TLISG C   +
Sbjct: 106 MVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK---GFSPNVITYSTLISGLCRELR 162

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G+ S A+K    + K G +P V T+N LI G  K+ +++EA  +FS +    + P+ +TY
Sbjct: 163 GV-SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITY 221

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
              I+G  + G  E    + ++M   G   D++++NA+I GLCKE +  +A  L+  ++ 
Sbjct: 222 TVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEA 281

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               PNA +++ LI GQC     ++A   +K M++ G +P    + +L+   C+     R
Sbjct: 282 KGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGR 341

Query: 492 AAEVLL---EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E +     M+EK   PD +  S L  GL   GK + A +L   ME +G +P
Sbjct: 342 IKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIP 394



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 153/300 (51%), Gaps = 4/300 (1%)

Query: 221 DYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           D GF P + + +  +S L    R V  AL  +  + +    P V T N+++    K   +
Sbjct: 140 DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRV 199

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E+F  +   G  P   TY   I G C  G +  A+     M++ G  P+V++ N +
Sbjct: 200 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 259

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+ ++ EA  + S M+A   SPN +++NTLI G  + G  +   + ++EML+ G+
Sbjct: 260 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 319

Query: 400 KVDILTYNALILGLCK---EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           K  ++TYN L+ GLCK   EG+ K+A  L   + +   VP+  TYSALI G       + 
Sbjct: 320 KPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDD 379

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L  +M   GC PN + +  L+S  C  E  D A E+ + M+EK   PD+I    + S
Sbjct: 380 ARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 146/274 (53%), Gaps = 3/274 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  +   G+ P + + N  +  LL  +RV+ A   +  + ++ + P+  T  + + 
Sbjct: 167 ALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFID 226

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G +E A+ + K+M+  G +P V ++N +I+G C +  +  A    + ME  G  P
Sbjct: 227 GLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSP 286

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG---QVGNSEMGA 388
           N I+FNTLI G C+ GK  +A   F EM    V P VVTYN L++G     Q G  +   
Sbjct: 287 NAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           +L++ M+  G   D++TY+ALI GL K GK   A  L+  ++    +PN  TY++LI+G 
Sbjct: 347 TLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGL 406

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           C  +  + A +L+ +M+  GC P+   +  ++S 
Sbjct: 407 CGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 9/385 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G       D   K+FD  +    + D   + ++ L   +    K   A     +M 
Sbjct: 50  TLLHGFCKVGELDEALKIFDGAVKRGFVPDV--VTYNALINGFCKADKLDEAQRILQRMV 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-LGII 279
               +P + + N  ++ L  + RVD A     +      SPNV T + ++   C+ L  +
Sbjct: 108 SENLVPDVVTYNSLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGV 164

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A+++F ++   G+ P V TYN LI G   +  ++ A +  + + K+G++P+ IT+   
Sbjct: 165 SEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVF 224

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK G++ +A  +  +M      P+VV++N +ING  +    +    L   M   G 
Sbjct: 225 IDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGC 284

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER--- 456
             + +++N LI G C+ GK KKA    K++ K  + P   TY+ L+ G C  +   R   
Sbjct: 285 SPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKE 344

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L+ +MI  G  P+   +  L+    +    D A  +L  M  K   P+    + L S
Sbjct: 345 AITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLIS 404

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL    K + A++LF  M  +G +P
Sbjct: 405 GLCGLEKVDEALELFVAMVEKGCVP 429



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 47/102 (46%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
              + + A   F  M + G +P + + +  +  L  + ++D A      M      PNVY
Sbjct: 338 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 397

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           T N ++   C L  ++ A+E+F  M   G +P   TY T+IS
Sbjct: 398 TYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIIS 439


>gi|449488446|ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 222/445 (49%), Gaps = 8/445 (1%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           WK L  +S  LT   V  V+ + +    L+LEF+ WV+     S +LE+   ++H+L  +
Sbjct: 46  WKFLEQVSPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNFSHSLESRCTLVHVLVNS 105

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R F  + SI+  ++  +    P ++   ++ SY +C+S+P VF    +T    +    A 
Sbjct: 106 RNFNDALSIMESLILXNG-KSPLEVLGGLMNSYEICNSNPAVFXARVRTCTQLRSVEGAY 164

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D   ++R  GF   I + N FL+ LL     D     YKEM  +  S NV T N++++A 
Sbjct: 165 DVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFXNMYKEMIASGYSENVNTFNLIIYAL 224

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF---KNLMEKNGIQ 330
           C    +  A+ V   M  +   P+V T+N +I      G + LA+K      ++    + 
Sbjct: 225 CNECKLLEAIYVVYLMLKIEIWPNVVTFNMIIDKANKMGEMDLALKLTRNTEVISGGSVS 284

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN++ +N +I GFCK  +L  A  +  EM    +  N  TY TLI+GY + G+ ++   L
Sbjct: 285 PNIVAYNCIINGFCKIRRLESAKNVLGEMIKLGIYFNERTYATLIDGYARKGSLDVAFRL 344

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM+   +  D   YN+LI  L  EG+ ++A++L+ D+    ++P+  TYS L  G CV
Sbjct: 345 CDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSILTKGLCV 404

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             +  +A +++  ++      +   + +L++   Q+ +   A ++L  M+   + PD + 
Sbjct: 405 SGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGGIKPDMVT 464

Query: 511 LSELYSGLHHC--GKDELAMKLFRK 533
                 G  HC  GK E A++++ K
Sbjct: 465 YGTPVDG--HCKEGKIEAAVQIYDK 487



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 149/299 (49%), Gaps = 3/299 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D+A     EM   R+ P+ +  N +++     G +E A  +  +M +   +P   TY+ 
Sbjct: 338 LDVAFRLCDEMVEMRLIPDTFVYNSLIYWLYMEGELEEASFLLSDMINRRILPDEFTYSI 397

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L  G C  G L+ A++    + +  +  +  T+N LI    +   +  A ++ S M    
Sbjct: 398 LTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQSRNIAGAKQLLSSMIVGG 457

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++VTY T ++G+ + G  E    +Y++ ++   K +++ YN+++ GLCK+G    A 
Sbjct: 458 IKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIYAAK 517

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            LV  L +N  + +  TY+ L+ G CV    E+AF L+  MI  G   N   + +++   
Sbjct: 518 LLVDKLQQNGFL-DPVTYNTLLHGFCVNGEIEKAFALFLEMINVGSLVNIVSYNIMIHFL 576

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG-LHHCGKDELAMKLFRKMEIRGLLP 541
           C+     +A E++  M  + + PD I  + L +  +  CG  ++ ++L   M ++G +P
Sbjct: 577 CKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKDV-IELHDYMVLKGAVP 634



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 162/335 (48%), Gaps = 4/335 (1%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  +++ G     S D+  +L D ++    + D+   V++ L        +   A+   
Sbjct: 323 RTYATLIDGYARKGSLDVAFRLCDEMVEMRLIPDT--FVYNSLIYWLYMEGELEEASFLL 380

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M +   LP   + +     L  S  ++ AL  +  +    +  + +T N++++   + 
Sbjct: 381 SDMINRRILPDEFTYSILTKGLCVSGHLNKALRVHYYIVERSLVRDAFTYNILINYMFQS 440

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             I  A ++  +M   G  P + TY T + GHC +G +  A++  +   K   + N++ +
Sbjct: 441 RNIAGAKQLLSSMIVGGIKPDMVTYGTPVDGHCKEGKIEAAVQIYDKTVKADGKSNLVVY 500

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N+++ G CK+G ++ A  +  +++  N   + VTYNTL++G+   G  E   +L+ EM+ 
Sbjct: 501 NSILDGLCKQGSIYAAKLLVDKLQ-QNGFLDPVTYNTLLHGFCVNGEIEKAFALFLEMIN 559

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G  V+I++YN +I  LCK G  ++A  L++ +    ++P+  TY+ LIT       S+ 
Sbjct: 560 VGSLVNIVSYNIMIHFLCKMGLIQQAMELMRAMSSQGIIPDLITYTTLITNFVEICGSKD 619

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             +L+  M+  G  P++  +   +S  C  E  +R
Sbjct: 620 VIELHDYMVLKGAVPDRKTYRSFVSP-CLQEHTER 653


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 195/388 (50%), Gaps = 14/388 (3%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP---LVFDLLFKTYAHRKKFRNATDTF 216
           +SILRG+ D+       +  D++L+   M  + P   + ++ +    +   +  +A    
Sbjct: 14  KSILRGLCDA------GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLL 67

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M D GF P + S N  L     + RV+ AL   ++M      P+V +   V++  CKL
Sbjct: 68  EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKL 127

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++ A  V   M   G  P+V TY TL+ G C  G L  A++    M + G +PN IT+
Sbjct: 128 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 187

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           N ++ G C   KL  A ++F EM+ + +  P+V TY+T+++   + G  +    L E M+
Sbjct: 188 NNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV 247

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G   +++TY++L+ GLCK GK  +A  L++ + ++   PN  TY+ +I G C     +
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A+ L + M+  GC+PN   + +L+  FC+    + A  ++  M+EK   P+    + L 
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367

Query: 516 SGLHHCGKDEL--AMKLFRKMEIRGLLP 541
                C KDE+  A +L   M  +G +P
Sbjct: 368 D--MFCKKDEVERACQLLSSMIQKGCVP 393



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 217/430 (50%), Gaps = 26/430 (6%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF------DSILYSY 186
           ++P+++T   ++ ++H L   RK  S+  + + + +S S   P  +F      DS++ S 
Sbjct: 180 YRPNAIT---YNNIMHGLCSGRKLDSALQLFKEMEESGS--CPPDVFTYSTIVDSLVKSG 234

Query: 187 RMCDSSPLVFDLLFK-------TYA-------HRKKFRNATDTFCQMRDYGFLPIIESCN 232
           ++ D+  LV  ++ K       TY+          K   AT    +M   G  P I + N
Sbjct: 235 KVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYN 294

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +       R+D A    +EM      PNV T  +++ AFCK G  E A+ + + M   
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G++P++ TYN+L+   C K  +  A +  + M + G  PNV+++NT+I G CK  K+HE 
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  +M + N  P++VT+NT+I+   +    ++   L+  +  +G   +++TYN+L+ G
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474

Query: 413 LCKEGKTKKAAYLVKDLD-KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           LCK  +  +A YL++++  K    P+  TY+ +I G C  K  +RA++L+  M+  G  P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   + +++S+ C+    D A  VL  ML+    P +I    L  G    G  + A+++ 
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEIL 594

Query: 532 RKMEIRGLLP 541
           + +  +G  P
Sbjct: 595 QLLLSKGSYP 604



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 159/314 (50%), Gaps = 1/314 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  S+R+D A+   +EM  N  +PNV++ N V+H FCK   +E A+ + + M  
Sbjct: 48  NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVM 107

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V +Y T+I+G C    +  A +  + M + G QPNVIT+ TL+ GFC+ G L  
Sbjct: 108 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 167

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-IKVDILTYNALI 410
           A  +  +M      PN +TYN +++G       +    L++EM  +G    D+ TY+ ++
Sbjct: 168 AVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIV 227

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L K GK   A  LV+ +      PN  TYS+L+ G C     + A  L + M RSGC 
Sbjct: 228 DSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 287

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   +  ++   C+    D A  +L EM++    P+ +  + L      CGK E A+ L
Sbjct: 288 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 347

Query: 531 FRKMEIRGLLPKGF 544
              M  +G +P  F
Sbjct: 348 VEVMVEKGYVPNLF 361



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 171/354 (48%), Gaps = 1/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + +L   +    K  +A      M + G++P + + N  L      + V+ A 
Sbjct: 321 CQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERAC 380

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    PNV + N V+   CK   +   V + + M S   +P + T+NT+I   
Sbjct: 381 QLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAM 440

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPN 367
           C    + +A +  NL++++G  PN++T+N+L+ G CK  +  +A  +  EM +    SP+
Sbjct: 441 CKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPD 500

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           ++TYNT+I+G  +    +    L+ +ML +G+  D +TY+ +I  LCK     +A  +++
Sbjct: 501 IITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLE 560

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + KN   P A TY  LI G C   N ++A ++ + ++  G  P+   F + +    +  
Sbjct: 561 LMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRG 620

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +A E+L  ML   + PD++  + L  G     + E A+ LF  M   G  P
Sbjct: 621 RLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 142/289 (49%), Gaps = 2/289 (0%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  +  +      ++   C  G    AV  F+ M S    P   TYNT+I+G      
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++    M  NG  PNV ++NT++ GFCK  ++  A  +  +M      P+VV+Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  ++   +    + ++M++ G + +++TY  L+ G C+ G    A  LV+ + +  
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRA 492
             PNA TY+ ++ G C  +  + A QL+K M  SG C P+   +  ++ +  ++   D A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++  M+ K  +P+ +  S L  GL   GK + A  L ++M   G  P
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 144/286 (50%), Gaps = 2/286 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM     +P I + N  + ++  + RVDIA   +  ++ +  +PN+ T N ++H  CK  
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 278 IIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++A  + + M    G  P + TYNT+I G C    +  A K    M  +G+ P+ +T+
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           + +I   CK   + EAN +   M      P  +TY TLI+G+ + GN +    + + +L 
Sbjct: 540 SIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLS 599

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   D++T++  I  L K G+ ++A  L++ + +  LVP+  TY+ L+ G C    +E 
Sbjct: 600 KGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTED 659

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF-DRAAEVLLEMLE 501
           A  L++ M + GC P+   +  L+      + + D  AEV   M++
Sbjct: 660 AVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVD 705



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 158/325 (48%), Gaps = 3/325 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +  + +   A      M   G +P + S N  ++ L  + +V   +   ++M 
Sbjct: 363 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N   P++ T N ++ A CK   ++ A E+F  ++  G  P++ TYN+L+ G C      
Sbjct: 423 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 482

Query: 316 LA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A    + +  K G  P++IT+NT+I G CK  ++  A ++F +M +  ++P+ VTY+ +
Sbjct: 483 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIV 542

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   +    +   ++ E ML+NG     +TY  LI G CK G   KA  +++ L     
Sbjct: 543 ISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGS 602

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  T+S  I     R    +A +L ++M+R+G  P+   +  L+  FC     + A +
Sbjct: 603 YPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662

Query: 495 VLLEMLEKC-MAPDSIILSELYSGL 518
            L E++ +C   PD+   + L   L
Sbjct: 663 -LFEVMRQCGCEPDNATYTTLVGHL 686



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 141/284 (49%), Gaps = 8/284 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + D + KTY    +   A + F  +++ G  P + + N  +  L  S R D A    +EM
Sbjct: 436 IIDAMCKTY----RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491

Query: 255 -RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            R+   SP++ T N V+   CK   ++RA ++F  M S G  P   TY+ +IS  C    
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A     LM KNG  P  IT+ TLI GFCK G L +A  I   + +    P+VVT++ 
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+   + G       L E MLR G+  D +TYN L+ G C   +T+ A  L + + +  
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671

Query: 434 LVPNASTYSALITGQCVRKNSERAF--QLYKSMIRSGCRPNKHI 475
             P+ +TY+ L+ G  V K S +    ++ KSM+ +G + N  +
Sbjct: 672 CEPDNATYTTLV-GHLVDKKSYKDLLAEVSKSMVDTGFKLNHEL 714



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 115/255 (45%), Gaps = 18/255 (7%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           ++ E F  +Q     +  L T++ ++H L K+R+F  +E +LR        ++  K    
Sbjct: 448 IAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR--------EMTRK---- 494

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
                + C    + ++ +       K+   A   F QM   G  P   + +  +SSL   
Sbjct: 495 -----QGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 549

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +D A    + M +N   P   T   ++  FCK G +++A+E+ + + S G  P V T+
Sbjct: 550 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 609

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           +  I     +G L  A +    M + G+ P+ +T+NTL+ GFC   +  +A  +F  M+ 
Sbjct: 610 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQ 669

Query: 362 TNVSPNVVTYNTLIN 376
               P+  TY TL+ 
Sbjct: 670 CGCEPDNATYTTLVG 684



 Score = 39.3 bits (90), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +++  L  +A  + +++ G C       A   ++ M ++ C P+   +  +++   +++ 
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDR 59

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            D A  +L EM++   AP+    + +  G     + E A+ L  +M +RG  P       
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 549 TIN 551
            IN
Sbjct: 120 VIN 122


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 178/327 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM   G  P I + +  ++     +RVD+A     ++ +  + P + T   +++  CK+G
Sbjct: 123 QMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVG 182

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
              +A+E+F +M + G  P V TY T+I+G C  G  + A      ME+ G QPNV+T++
Sbjct: 183 KFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYS 242

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I    K  +++EA  IFS MK   +SP++ TYN+LI G       +  ++L  EM   
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  DI+T+N L+  +CKEGK  +A  ++K + +  + P+  TYS+L+ G  +R     A
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+ +MI  GC+P+   + +L++ +C+ +  D A ++  EM+ + + P+++  + L  G
Sbjct: 363 RKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHG 422

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L   G    A  LF+ M   G LP  F
Sbjct: 423 LCQLGSLREARNLFKNMHTNGNLPNLF 449



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 190/370 (51%), Gaps = 2/370 (0%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F    +LFD ++   R C      +  +        +   A     +M + G  P + + 
Sbjct: 184 FAQAMELFDDMVA--RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTY 241

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  + S     RV+ AL  +  M+   ISP+++T N ++   C     + A  +   M S
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS 301

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +  +P + T+N L+   C +G +S A      M + G++P+V+T+++L++G+  + ++ E
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++F  M      P+V +YN LINGY +V   +    L+ EM+  G+  + ++YN LI 
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC+ G  ++A  L K++  N  +PN  TYS L+ G C +    +AF+L+++M  +  +P
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N  ++ +L+   C++ +   A ++  E+  K + P++ I + + +GL   G  + A++ F
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 532 RKMEIRGLLP 541
           R ME  G  P
Sbjct: 542 RNMEEDGCPP 551



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 173/352 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  +  ++   ++   A D F  M+  G  P I + N  +  L +  +   A 
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EMR   I P++ T N+++   CK G +  A  V K M  MG  P V TY++L+ G+
Sbjct: 294 ALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +  +  A K  + M   G +P+V ++N LI G+CK  ++ EA ++F+EM    ++PN 
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YNTLI+G  Q+G+     +L++ M  NG   ++ TY+ L+ G CK+G   KA  L + 
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +      PN   Y+ LI   C   N   A +L+  +   G +PN  I+  +++  C+   
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            D A E    M E    PD I  + +  G  H   +  A++L  +M  +G +
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 178/387 (45%), Gaps = 37/387 (9%)

Query: 192 SPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP ++ L  L   ++H ++   A     ++   G  P I +    ++ L    +   A+ 
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + +M      P+VYT   +++  CK+G    A  + K ME  G  P+V TY+T+I  H 
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               ++ A+   + M+  GI P++ T+N+LI G C   +  EA+ + +EM++ N+ P++V
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 370 TYNTLINGYGQVGN-----------SEMGAS------------------------LYEEM 394
           T+N L++   + G            +EMG                          L++ M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  G K D+ +YN LI G CK  +  +A  L  ++    L PN  +Y+ LI G C   + 
Sbjct: 370 ITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSL 429

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A  L+K+M  +G  PN   + +L+  FC+   F +A  +   M      P+ ++ + L
Sbjct: 430 REARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNIL 489

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +   G    A KLF ++ ++GL P
Sbjct: 490 IDAMCKSGNLRDARKLFSELFVKGLQP 516



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 118/247 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y+ R +   A   F  M   G  P + S N  ++     +R+D A   + E
Sbjct: 344 VTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNE 403

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++PN  + N ++H  C+LG +  A  +FKNM + G +P++ TY+ L+ G C +G 
Sbjct: 404 MIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGY 463

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A +    M+    +PN++ +N LI   CK G L +A ++FSE+    + PN   Y T
Sbjct: 464 FGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTT 523

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  + G  +     +  M  +G   D ++YN +I G        +A  L+ ++    
Sbjct: 524 IINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583

Query: 434 LVPNAST 440
            + +  T
Sbjct: 584 FIADVGT 590



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 105/229 (45%), Gaps = 2/229 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLFD+++   + C      +++L   Y   K+   A   F +M   G  P   S N  + 
Sbjct: 364 KLFDAMIT--KGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L     +  A   +K M  N   PN++T ++++  FCK G   +A  +F+ M+S    P
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  YN LI   C  G L  A K  + +   G+QPN   + T+I G CK+G L EA   F
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             M+     P+ ++YN +I G+    +      L  EM   G   D+ T
Sbjct: 542 RNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 170/347 (48%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   G  P + +    L  L   +RV  AL F+ +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C KG   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ ++ +I   CK G+  +A  +F+EM+   + P++ TYN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G       L +EML   I  D++TYNALI    KEGK  +A  L  ++    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS++I G C +   + A  ++  M   GC PN   F  L+  +C  +  D   E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G +  G    A+ L ++M   GL P
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TY+++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  PN+ITFNTLI G+C   ++ +   +  EM  T +  +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------- 426
           LI+G+  VG+      L +EM+ +G+  DI+T + L+ GLC  GK K A  +        
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 427 KDLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           KDLD     N + P+  TY+ LI+G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++   M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AITYITLICGFRKVGNINGA 635



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 170/336 (50%), Gaps = 1/336 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++  FC    +  A+  F  +  +G  P V T+ TL+ G C +  +S A+ F + M +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  + G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  A E+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  S +  G     + + A  +F  M  +G  P
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + +  +       R+D A   +  M     SPN+ T N ++  +C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G +   TTYNTLI G    G L+ A+     M  +G+ P+++T +TL+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEI 536
            +  + +GL    K+EL  A+ +  K+++
Sbjct: 653 TIRNMLTGLWS--KEELKRAVAMLEKLQM 679



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 158/349 (45%), Gaps = 11/349 (3%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P +   +  + SL    R   A   + EM+   I P+++T N ++  FC  G    A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + + M      P V TYN LI+    +G    A +  + M   GI PN IT++++I GFC
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+ +L  A  +F  M     SPN++T+NTLI+GY      + G  L  EM   G+  D  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN LI G    G    A  L++++  + L P+  T   L+ G C     + A +++K M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 465 IRS-----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            +S           G  P+   + +L+S       F  A E+  EM  + + PD+I  S 
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +  GL    + + A ++F  M  +   P        IN   + G  + G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 8/355 (2%)

Query: 189 CDSSPL-VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C SSP      LF T + R     A+   C+    G     ES  K  S   + + ++ A
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGG-----ESL-KLQSGFHEIKGLEDA 63

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  + +M R+R  P+V     +M    ++   +  + +++ ME       + ++N LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C+   L  A+     + K G+ P+V+TF TL+ G C + ++ EA   F +M  T   PN
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVT+ TL+NG  + G      +L + M+ +G++   +TY  ++ G+CK+G T  A  L++
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 428 DLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +++ S ++PN   YSA+I   C       A  L+  M   G  P+   +  ++  FC +
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  A ++L EMLE+ ++PD +  + L +     GK   A +L+ +M  RG++P
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 12/322 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + +   A   F  M   G  P + + N  +     ++R+D  +    E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +  T N ++H F  +G +  A+++ + M S G  P + T +TL+ G C+ G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 314 LSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           L  A++   +M+K           NG++P+V T+N LI G   +GK  EA  ++ EM   
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TY+++I+G  +    +    +++ M       +++T+  LI G CK G+    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++ +  +V NA TY  LI G     N   A  +++ MI SG  P+      +++ 
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 483 FCQNEDFDRAAEVLLEMLEKCM 504
               E+  RA   +LE L+  M
Sbjct: 661 LWSKEELKRAV-AMLEKLQMSM 681


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 194/375 (51%), Gaps = 6/375 (1%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S+SF   +   + ++Y+Y+   S P VFD+ F+          A   F ++ +YG     
Sbjct: 18  SNSF---THFVERLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSA 74

Query: 229 ESCNKFLSSLLDSER--VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            SCN +L+ L  S+R  + + L  + E  +  +  N  + N++M++  +LG I  A  + 
Sbjct: 75  GSCNLYLTCL-SSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLL 133

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             ME  G IP V +Y T+I G+C+ G L   ++    M+  G++PN+ T++++I   CK 
Sbjct: 134 MRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKS 193

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           GK+ E  ++  EM    V P+ V Y TLI+G+ ++GN++    L+ EM    I  D + +
Sbjct: 194 GKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAF 253

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           +ALI GL   GK  +A  L  ++ K    P+  TY+ALI G C     ++AF L+  M++
Sbjct: 254 SALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQ 313

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  PN   +  L    C++ + D A E+L EM  K +  +    + + +GL   G    
Sbjct: 314 IGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQ 373

Query: 527 AMKLFRKMEIRGLLP 541
           A+KL  +M+  GL P
Sbjct: 374 AVKLMEEMKEAGLHP 388



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L  +     K R A     +M   G +P + S    +        +   +   KEM+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN+YT + ++   CK G +    +V + M   G  P    Y TLI G C  G   
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + ME   I P+ I F+ LI G    GK+ EA+++F+EM      P+ VTY  LI
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALI 292

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY ++G  +    L+ +M++ G+  +++TY AL  GLCK G+   A  L+ ++ +  L 
Sbjct: 293 DGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQ 352

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            N STY+ ++ G C   N  +A +L + M  +G  P+   +  LM  + +  +  +A E+
Sbjct: 353 LNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAREL 412

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L EML++ + P  +  + L +GL   GK E   +L + M  +G++P
Sbjct: 413 LREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMP 458



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 192/402 (47%), Gaps = 18/402 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T+S ++ +L K+ K    E +LR ++    F       D ++Y+             L
Sbjct: 180 LYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFP------DHVIYT------------TL 221

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              +      + A   F +M     +P   + +  +  L  S +V  A   + EM +   
Sbjct: 222 IDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGF 281

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+  T   ++  +CKLG +++A  +   M  +G  P+V TY  L  G C  G L  A +
Sbjct: 282 EPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANE 341

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M + G+Q N+ T+NT++ G CK G + +A ++  EMK   + P+ +TY TL++ Y 
Sbjct: 342 LLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYY 401

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G       L  EML  G++  ++T+N L+ GLC  GK +    L+K + +  ++PNA+
Sbjct: 402 KTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY++++   C+R N   + ++Y+ M   G  P+ + + +L+   C+  +   A  +  EM
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +EK     +   + L  G     K   A +LF +M   GL+ 
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVA 563



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 177/359 (49%), Gaps = 4/359 (1%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            ++ C    + +  +   Y H  + +       +M+  G  P + + +  +  L  S +V
Sbjct: 137 EFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKV 196

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
                  +EM +  + P+      ++  FCKLG  + A ++F  ME+   +P    ++ L
Sbjct: 197 VEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSAL 256

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G    G +  A K  N M K G +P+ +T+  LI G+CK G++ +A  + ++M    +
Sbjct: 257 ICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGL 316

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +PNVVTY  L +G  + G  +    L  EM R G++++I TYN ++ GLCK G   +A  
Sbjct: 317 TPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVK 376

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L++++ +  L P+  TY+ L+          +A +L + M+  G +P    F +LM+  C
Sbjct: 377 LMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD--ELAMKLFRKMEIRGLLP 541
            +   +    +L  MLEK + P++   + +     +C ++   ++ +++R M  +G++P
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMK--QYCIRNNMRISTEIYRGMCAQGVVP 493



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 158/344 (45%), Gaps = 2/344 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  S       KLF+ ++   +  +   + +  L   Y    + + A     QM 
Sbjct: 255 ALICGLSGSGKVVEADKLFNEMIK--KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV 312

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +       L  S  +D A     EM R  +  N+ T N +++  CK G I 
Sbjct: 313 QIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNIL 372

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +AV++ + M+  G  P   TY TL+  +   G +  A +    M   G+QP V+TFN L+
Sbjct: 373 QAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLM 432

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  GKL +  R+   M    + PN  TYN+++  Y    N  +   +Y  M   G+ 
Sbjct: 433 NGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVV 492

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TYN LI G CK    K+A +L K++ +      AS+Y+ALI G   RK    A QL
Sbjct: 493 PDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQL 552

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           ++ M R G   +  I+ + +    +  + +   E+  E +EKC+
Sbjct: 553 FEEMRREGLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCL 596



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M++ G  P   +    + +   +  +  A    +EM    + P V T N++M+  C  G
Sbjct: 380 EMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSG 439

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E    + K M   G +P+  TYN+++  +C +  + ++ +    M   G+ P+  T+N
Sbjct: 440 KLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYN 499

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK   + EA  +  EM     +    +YN LI G+ +         L+EEM R 
Sbjct: 500 ILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRRE 559

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G+      YN  +    +EG  +    L  +  +  L+  A
Sbjct: 560 GLVASAEIYNLFVDMNYEEGNMETTLELCDEAIEKCLLDKA 600


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   G  P + + N  L  L   +RV  AL  + +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C KG   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ ++ +I   CK G+  +A  +F+EM+   + P++ TYN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G       L +EML   I  D++TYNALI    KEGK  +A  L  ++    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS++I G C +   + A  ++  M   GC PN   F  L+  +C  +  D   E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G +  G    A+ L ++M   GL P
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TY+++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  PN+ITFNTLI G+C   ++ +   +  EM  T +  +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------- 426
           LI+G+  VG+      L +EM+ +G+  DI+T + L+ GLC  GK K A  +        
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 427 KDLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           KDLD     N + P+  TY+ LI+G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++   M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AITYITLICGFRKVGNINGA 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + +  +       R+D A   +  M     SPN+ T N ++  +C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G +   TTYNTLI G    G L+ A+     M  +G+ P+++T +TL+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEI 536
            +  + +GL    K+EL  A+ +  K+++
Sbjct: 653 TIRNMLTGLWS--KEELKRAVAMLEKLQM 679



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +G  P V T+NTL+ G C +  +S A+   + M +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  + G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  A E+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  S +  G     + + A  +F  M  +G  P
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 158/349 (45%), Gaps = 11/349 (3%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P +   +  + SL    R   A   + EM+   I P+++T N ++  FC  G    A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + + M      P V TYN LI+    +G    A +  + M   GI PN IT++++I GFC
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFC 371

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+ +L  A  +F  M     SPN++T+NTLI+GY      + G  L  EM   G+  D  
Sbjct: 372 KQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTT 431

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN LI G    G    A  L++++  + L P+  T   L+ G C     + A +++K M
Sbjct: 432 TYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVM 491

Query: 465 IRS-----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            +S           G  P+   + +L+S       F  A E+  EM  + + PD+I  S 
Sbjct: 492 QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +  GL    + + A ++F  M  +   P        IN   + G  + G
Sbjct: 552 MIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 12/322 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + +   A   F  M   G  P + + N  +     ++R+D  +    E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +  T N ++H F  +G +  A+++ + M S G  P + T +TL+ G C+ G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 314 LSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           L  A++   +M+K           NG++P+V T+N LI G   +GK  EA  ++ EM   
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TY+++I+G  +    +    +++ M       +++T+  LI G CK G+    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++ +  +V NA TY  LI G     N   A  +++ MI SG  P+      +++ 
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 483 FCQNEDFDRAAEVLLEMLEKCM 504
               E+  RA   +LE L+  M
Sbjct: 661 LWSKEELKRAV-AMLEKLQMSM 681


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 48/458 (10%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           LK + D  L+LE+F  +   K    T  T+ +++  L   R+    + +L+  +  +   
Sbjct: 50  LKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQ-MKLEGIS 108

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF S++ SYR   SS                   A  TF +M+D+   P ++  N 
Sbjct: 109 CSEDLFISVIGSYRRAGSS-----------------EQALKTFYRMQDFRVKPTVKIYNH 151

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-- 291
            L +LLD  R  +    Y  M+++ + PNV+T N+++ A CK   ++ A ++   M S  
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211

Query: 292 ----------------------------MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
                                       M F PSV  YN LI+G C +     A +  + 
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDE 271

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   GI PNVI++ T+I      G +  +  + ++M A   SPN+ T+ +LI G+   G 
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           S      ++ M+R G+  +++ YNAL+ GLC +     A  +   ++ N   PN  TYSA
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G     + + A +++  MI  GC PN   +  ++   C+N  F++A  ++  M  + 
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             P+++  +    GL   G+ + A+K+F +M   G  P
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/383 (24%), Positives = 178/383 (46%), Gaps = 7/383 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ +  ++  D   KL   +  S + CD   + +  L  +     K + A +       
Sbjct: 187 LLKALCKNNRVDGAHKLL--VEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----A 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             F P +   N  ++ +      + A     EM    I PNV +   +++A    G +E 
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           ++ V   M + G  P++ T+ +LI G   KG    A+ F + M + G+ PNV+ +N L+ 
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C K  L +A  +F++M+     PNV TY+ LI+GY + G+ +  + ++  M+ +G   
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y  ++  LC+     +A  L++++   +  PN  T++  I G C     + A +++
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVF 479

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M  SGC PN   +  L+ +  ++  F  A  ++ +M  + +  + +  + +  G    
Sbjct: 480 DQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCA 539

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G    A++L  KM +RG  P   
Sbjct: 540 GMLGEALELLGKMVVRGTKPDAI 562



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 2/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F+  M R  + PNV   N +MH  C    +  AV VF  ME  G  P+V TY+ LI 
Sbjct: 335 ALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALID 394

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+   G L  A +  N M  +G  PNV+ +  ++   C+    ++A  +   M+  N  P
Sbjct: 395 GYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N VT+NT I G    G  +    ++++M  +G   +  TYN L+  L K+ +  +A  LV
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           KD++   +  N  TY+ +I G C       A +L   M+  G +P+     +++  +C+ 
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGL-HHCGKDELAMKLFRKMEIRGLLP 541
              + A +++  +      PD I  + L SG+  H G +E A+   R+M   G+ P
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE-AIVYLRRMLSEGISP 629



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 165/369 (44%), Gaps = 6/369 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +I+  + D+ + +L   +   +    R C  +   F  L K +  +     A D + 
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFA--RGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P + + N  +  L     +  A+  + +M  N   PNV T + ++  + K G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A EV+  M + G  P+V  Y  ++   C   + + A      M+     PN +TFN
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T I G C  G++  A ++F +M  +   PN  TYN L++   +         L ++M   
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI+++++TYN +I G C  G   +A  L+  +      P+A T + +I   C +     A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSE 513
            QL   +      P+   +  L+S  C +   + A   L  ML + ++P+    ++++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 514 LYSGLHHCG 522
           L+S + H G
Sbjct: 641 LFSNMGHSG 649



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 132/303 (43%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L      ++   +A   F QM   G  P + + +  +     +  +D A   +  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  +   PNV     ++   C+  +  +A  + +NM+     P+  T+NT I G C  G 
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M  +G  PN  T+N L+    K  +  EA  +  +M+   +  N+VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY   G       L  +M+  G K D +T N +I   CK+GK   A  L+  L    
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   Y++LI+G C     E A    + M+  G  PN   + +L+     N     A 
Sbjct: 592 WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAV 651

Query: 494 EVL 496
           + L
Sbjct: 652 QFL 654


>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
          Length = 581

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 176/351 (50%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           + P V   L    A   +  +A   F  MR  G  P   +C   L++L  +     A   
Sbjct: 106 AGPHVPSWLVLVLAQSARPHDAVRVFDHMRARGLAPDAHACTALLTALARARMTATARRV 165

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + EM R  ++   +  N ++H   K G   +A  +   M++ G      +YNT+I+ +C 
Sbjct: 166 FDEMARAGLAATTHVYNAMLHVCLKAGDAAQAEAIVTRMDAAGVTLDRFSYNTVIALYCR 225

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG+   AM  ++ M+K GI+P+ +T+N+ I G CK+G++ EA ++F+EM A   +P+ VT
Sbjct: 226 KGMGYEAMCARDRMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVT 285

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+GY + GN E    L   M   G+   + TYNA++  LC++G  K+   L+ ++D
Sbjct: 286 YTTLIDGYCRAGNVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMD 345

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              +  +  T + LI   C R +   A ++ K M+ SG + N   ++ L+  FC+  + D
Sbjct: 346 GRKVQADHVTCNTLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELD 405

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A E   +M++   +P+  + S L  G       +  + +  ++  RGL P
Sbjct: 406 GAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPP 456



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 150/333 (45%), Gaps = 8/333 (2%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   + N  +  L    RV  A   + EM   + +P+  T   ++  +C+ G
Sbjct: 238 RMDKEGIRPDTVTWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAG 297

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E AV++   ME+ G +P V TYN ++   C  G +    +  + M+   +Q + +T N
Sbjct: 298 NVEEAVKLRGRMEAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCN 357

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI  +CK+G +  A ++  +M  + +  N  TY  LI+G+ +    +     + +M+  
Sbjct: 358 TLINAYCKRGDMTSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDA 417

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   +   ++ L+ G CK+        +  +L K  L P+ + Y +LI   C +   ++A
Sbjct: 418 GFSPNYSVFSWLVDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQA 477

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++  M   G   +  ++  L  T+    +   A   L  M +  +     I  ++Y+ 
Sbjct: 478 QRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQL----YITPQIYNC 533

Query: 518 LHHCGKDE---LAMKLFRKMEIRGLLPKGFDKL 547
           L     DE   L M   R +E RGL+ K   KL
Sbjct: 534 LCTSYADEKETLNMLWVRAIE-RGLIKKSVYKL 565



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 111/286 (38%), Gaps = 2/286 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S + G+         ++LF  ++ +    D+  + +  L   Y        A     +M 
Sbjct: 253 SSIHGLCKEGRVKEAAQLFTEMVAAQATPDN--VTYTTLIDGYCRAGNVEEAVKLRGRME 310

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + + N  L  L +   +        EM   ++  +  T N +++A+CK G + 
Sbjct: 311 AAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMT 370

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +V K M   G   +  TY  LI G C    L  A +    M   G  PN   F+ L+
Sbjct: 371 SACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLV 430

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCKK        I  E+    + P+   Y +LI    + G  +    ++++M   G+ 
Sbjct: 431 DGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLV 490

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            D L Y  L      +G    A   +  + KN L      Y+ L T
Sbjct: 491 GDSLVYATLAYTYLTKGNPTAALNTLDGMTKNQLYITPQIYNCLCT 536


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 208/458 (45%), Gaps = 48/458 (10%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           LK + D  L+LE+F  +   K    T  T+ +++  L   R+    + +L+  +  +   
Sbjct: 50  LKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQ-MKLEGIS 108

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF S++ SYR   SS                   A  TF +M+D+   P ++  N 
Sbjct: 109 CSEDLFISVIGSYRRAGSS-----------------EQALKTFYRMQDFRVKPTVKIYNH 151

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-- 291
            L +LLD  R  +    Y  M+++ + PNV+T N+++ A CK   ++ A ++   M S  
Sbjct: 152 ILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG 211

Query: 292 ----------------------------MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
                                       M F PSV  YN LI+G C +     A +  + 
Sbjct: 212 CDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDE 271

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   GI PNVI++ T+I      G +  +  + ++M A   SPN+ T+ +LI G+   G 
Sbjct: 272 MMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGG 331

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           S      ++ M+R G+  +++ YNAL+ GLC +     A  +   ++ N   PN  TYSA
Sbjct: 332 SHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G     + + A +++  MI  GC PN   +  ++   C+N  F++A  ++  M  + 
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             P+++  +    GL   G+ + A+K+F +M   G  P
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 182/403 (45%), Gaps = 23/403 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I+L  L KN +   +  +L                  +  S + CD   + +  L  
Sbjct: 183 TYNILLKALCKNNRVDGAHKLL------------------VEMSSKGCDPDEVSYTTLIS 224

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           +     K + A +         F P +   N  ++ +      + A     EM    I P
Sbjct: 225 SLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDP 279

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV +   +++A    G +E ++ V   M + G  P++ T+ +LI G   KG    A+ F 
Sbjct: 280 NVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFW 339

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G+ PNV+ +N L+ G C K  L +A  +F++M+     PNV TY+ LI+GY + 
Sbjct: 340 DRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKA 399

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ +  + ++  M+ +G   +++ Y  ++  LC+     +A  L++++   +  PN  T+
Sbjct: 400 GDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTF 459

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +  I G C     + A +++  M  SGC PN   +  L+ +  ++  F  A  ++ +M  
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEH 519

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + +  + +  + +  G    G    A++L  KM +RG  P   
Sbjct: 520 RGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAI 562



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 143/296 (48%), Gaps = 2/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F+  M R  + PNV   N +MH  C    +  AV VF  ME  G  P+V TY+ LI 
Sbjct: 335 ALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALID 394

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+   G L  A +  N M  +G  PNV+ +  ++   C+    ++A  +   M+  N  P
Sbjct: 395 GYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPP 454

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N VT+NT I G    G  +    ++++M  +G   +  TYN L+  L K+ +  +A  LV
Sbjct: 455 NTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLV 514

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           KD++   +  N  TY+ +I G C       A +L   M+  G +P+     +++  +C+ 
Sbjct: 515 KDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQ 574

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGL-HHCGKDELAMKLFRKMEIRGLLP 541
              + A +++  +      PD I  + L SG+  H G +E A+   R+M   G+ P
Sbjct: 575 GKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE-AIVYLRRMLSEGISP 629



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 165/369 (44%), Gaps = 6/369 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +I+  + D+ + +L   +   +    R C  +   F  L K +  +     A D + 
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFA--RGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G +P + + N  +  L     +  A+  + +M  N   PNV T + ++  + K G
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A EV+  M + G  P+V  Y  ++   C   + + A      M+     PN +TFN
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFN 460

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T I G C  G++  A ++F +M  +   PN  TYN L++   +         L ++M   
Sbjct: 461 TFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHR 520

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI+++++TYN +I G C  G   +A  L+  +      P+A T + +I   C +     A
Sbjct: 521 GIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIA 580

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSE 513
            QL   +      P+   +  L+S  C +   + A   L  ML + ++P+    ++++  
Sbjct: 581 IQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRH 640

Query: 514 LYSGLHHCG 522
           L+S + H G
Sbjct: 641 LFSNMGHSG 649



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 134/307 (43%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L      ++   +A   F QM   G  P + + +  +     +  +D A   +  
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  +   PNV     ++   C+  +  +A  + +NM+     P+  T+NT I G C  G 
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M  +G  PN  T+N L+    K  +  EA  +  +M+   +  N+VTYNT
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY   G       L  +M+  G K D +T N +I   CK+GK   A  L+  L    
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   Y++LI+G C     E A    + M+  G  PN   + +L+     N     A 
Sbjct: 592 WHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAV 651

Query: 494 EVLLEML 500
           + L  +L
Sbjct: 652 QFLDAVL 658



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 122/280 (43%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   +  L   YA       A++ +  M  +G  P + +    +  L  +   + A 
Sbjct: 382 CCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY 441

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M+     PN  T N  +   C  G ++ A++VF  M + G  P+ TTYN L+   
Sbjct: 442 CLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL 501

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                   A      ME  GI+ N++T+NT+I+G+C  G L EA  +  +M      P+ 
Sbjct: 502 LKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T N +I+ Y + G   +   L + +       DI+ Y +LI G+C     ++A   ++ 
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +    + PN +T++ L+           A Q   +++ SG
Sbjct: 622 MLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 214/438 (48%), Gaps = 22/438 (5%)

Query: 123  SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDS 181
             LE F  ++ H   S T+  +++++  L K R+ K +E +   +L      LPS + +++
Sbjct: 571  GLELFNRMK-HDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL--LPSLITYNT 627

Query: 182  ILYSY--------------RM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
            ++  Y              RM     + S + F+ L K         +A +   +M+D G
Sbjct: 628  LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687

Query: 224  FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            F+P   + +        +++ D ALG Y+    + +  N YT +++++A CK G IE+A 
Sbjct: 688  FVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAE 747

Query: 284  EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            E+     + G +P+   YNT+I G+  KG L  A    + MEK G++P+ + +N LI  F
Sbjct: 748  EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807

Query: 344  CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            C+ G +  A +  ++MK   VSP+V TYN LI GYG+    +    L +EM  NG   ++
Sbjct: 808  CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV 867

Query: 404  LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            ++Y  LI  LCK  K  +A  + +D++   + PN   Y+ LI G C +   E AF+  + 
Sbjct: 868  VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEE 927

Query: 464  MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
            M + G   N   +  L+     N     A ++LLE+  K + PD    + L SG    G 
Sbjct: 928  MFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGN 987

Query: 524  DELAMKLFRKMEIRGLLP 541
             +  + L+ +M+  G+ P
Sbjct: 988  VQRCIALYEEMKTSGIKP 1005



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/363 (28%), Positives = 181/363 (49%), Gaps = 4/363 (1%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           DS  L+ D L KT    K+FR   + F  + +  F P      K + + +    V   L 
Sbjct: 518 DSLTLLLDHLVKT----KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLE 573

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M+ +RISP V+  N+++   CK+  ++ A ++F  M +   +PS+ TYNTLI G+C
Sbjct: 574 LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYC 633

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G    + K +  M+ + I+P++ITFNTL+ G  K G + +A  + +EMK     P+  
Sbjct: 634 KDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAF 693

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T++ L +GY     ++    +YE  + +G+K++  T + L+  LCKEG+ +KA  ++   
Sbjct: 694 TFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGRE 753

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               LVPN   Y+ +I G   + +   A     +M + G +P+   +  L+ TFC+  D 
Sbjct: 754 MAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDM 813

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
           + A + + +M  K ++P     + L  G     + +    L ++ME  G +P        
Sbjct: 814 ENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTL 873

Query: 550 INC 552
           INC
Sbjct: 874 INC 876



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 139/268 (51%), Gaps = 8/268 (2%)

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M +  + P+    N ++  FC+LG +E A +    M+  G  PSV TYN LI G+  K  
Sbjct: 788  MEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYE 847

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                      ME NG  PNV+++ TLI   CK  KL EA  +  +M+   VSPNV  YN 
Sbjct: 848  FDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNM 907

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LI+G    G  E      EEM + GI+++++TYN LI GL   GK  +A  ++ ++ +  
Sbjct: 908  LIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKG 967

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            L P+  TY++LI+G     N +R   LY+ M  SG +P    + +L+S  C  E  +   
Sbjct: 968  LKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS-LCTKEGIELTK 1026

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHC 521
            ++  EM    + PD ++    Y+G+ HC
Sbjct: 1027 KIFGEM---SLQPDLLV----YNGVLHC 1047



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 172/350 (49%), Gaps = 10/350 (2%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            L ++ L +T+       NA     +M+  G  P +E+ N  +         D      KE
Sbjct: 798  LAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKE 857

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M  N   PNV +   +++  CK   +  A  V ++ME  G  P+V  YN LI G C+KG 
Sbjct: 858  MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A +F   M K GI+ N++T+NTLI G    GKL EA  +  E+    + P+V TYN+
Sbjct: 918  IEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNS 977

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKN 432
            LI+GY   GN +   +LYEEM  +GIK  + TY+ L++ LC    TK+   L K +  + 
Sbjct: 978  LISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLC----TKEGIELTKKIFGEM 1032

Query: 433  SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            SL P+   Y+ ++    V  + ++AF L K MI      +K  +  L+    +       
Sbjct: 1033 SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 1092

Query: 493  AEVLLEMLEKCMAPDSIILSELYSGLHHCG-KDEL-AMKLFRKMEIRGLL 540
              ++ EM  + M P++     +  G  HC  KD + A   +R+M+ +GLL
Sbjct: 1093 RSLIDEMKAREMEPEADTYDIIVKG--HCEMKDYMGAYVWYREMQEKGLL 1140



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 180/399 (45%), Gaps = 42/399 (10%)

Query: 147 LHILTKNRKFKSSESILRGILDSDS--FDLPSKLFDSILYSYRMC--DSSPLVFDLLFKT 202
           L +L +  + +++  +L  +L SDS  F  P +LF +   S      D S L+  +L   
Sbjct: 435 LRVLLQQNRIETARGVLYSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFSYLLLSVLLN- 493

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
               K    A D F  +R+ G  P  +S    L  L+ +++  + +  +  +  +   P+
Sbjct: 494 --ESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 551

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +     + A  KL  + + +E+F                                   N
Sbjct: 552 KFMYGKAIQAAVKLSDVGKGLELF-----------------------------------N 576

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+ + I P V  +N LI G CK  ++ +A ++F EM A  + P+++TYNTLI+GY + G
Sbjct: 577 RMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDG 636

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N E    + E M  + I+  ++T+N L+ GL K G  + A  ++ ++     VP+A T+S
Sbjct: 637 NPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFS 696

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L  G      ++ A  +Y++ + SG + N +   +L++  C+    ++A E+L   + K
Sbjct: 697 ILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAK 756

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + P+ ++ + +  G    G    A      ME +G+ P
Sbjct: 757 GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKP 795



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 165/350 (47%), Gaps = 4/350 (1%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            ++++ +   Y+ +     A      M   G  P   + N  + +  +   ++ A     +
Sbjct: 763  VLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNK 822

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M+   +SP+V T N+++  + +    ++  ++ K ME  G +P+V +Y TLI+  C    
Sbjct: 823  MKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSK 882

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A   K  ME  G+ PNV  +N LI G C KGK+ +A R   EM    +  N+VTYNT
Sbjct: 883  LLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNT 942

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LI+G    G       +  E+ R G+K D+ TYN+LI G    G  ++   L +++  + 
Sbjct: 943  LIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSG 1002

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            + P   TY  LI+  C ++  E   +++  M     +P+  ++  ++  +  + D D+A 
Sbjct: 1003 IKPTLKTYHLLIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAF 1058

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
             +  +M+EK +  D    + L  G    GK      L  +M+ R + P+ 
Sbjct: 1059 NLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEA 1108



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 151/341 (44%), Gaps = 33/341 (9%)

Query: 192  SPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            SP V  +++L   Y  + +F    D   +M D G +P + S    ++ L    ++  A  
Sbjct: 829  SPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 888

Query: 250  FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              ++M    +SPNV   NM++   C  G IE A    + M   G   ++ TYNTLI G  
Sbjct: 889  VKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLS 948

Query: 310  NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
              G L+ A      + + G++P+V T+N+LI G+   G +     ++ EMK + + P + 
Sbjct: 949  MNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLK 1008

Query: 370  TYNTLI---------------------------NG----YGQVGNSEMGASLYEEMLRNG 398
            TY+ LI                           NG    Y   G+ +   +L ++M+   
Sbjct: 1009 TYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKS 1068

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            I +D  TYN+LILG  K GK  +   L+ ++    + P A TY  ++ G C  K+   A+
Sbjct: 1069 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAY 1128

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              Y+ M   G   +  I + L+S   +      A  V+ EM
Sbjct: 1129 VWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 116/242 (47%), Gaps = 6/242 (2%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + ++ L    +   K   A D   ++   G  P + + N  +S    +  V   +  Y+E
Sbjct: 938  VTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M+ + I P + T ++++    K GI E   ++F  M      P +  YN ++  +   G 
Sbjct: 998  MKTSGIKPTLKTYHLLISLCTKEGI-ELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGD 1053

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A   +  M +  I  +  T+N+LI G  K GKL E   +  EMKA  + P   TY+ 
Sbjct: 1054 MDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDI 1113

Query: 374  LINGYGQVGNSEMGASL-YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            ++ G+ ++ +  MGA + Y EM   G+ +D+   + L+ GL +E ++K+A  ++ +++  
Sbjct: 1114 IVKGHCEMKDY-MGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEMNGR 1172

Query: 433  SL 434
             L
Sbjct: 1173 KL 1174



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/196 (19%), Positives = 81/196 (41%)

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA  +F  ++   + P+  +   L++   +     +  +++  +L +  +     Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
            I    K     K   L   +  + + P    Y+ LI G C  +  + A QL+  M+   
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   +  L+  +C++ + +++ +V   M    + P  I  + L  GL   G  E A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 529 KLFRKMEIRGLLPKGF 544
            +  +M+ +G +P  F
Sbjct: 678 NVLTEMKDQGFVPDAF 693


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 169/347 (48%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   G  P + + N  L  L   +RV  AL  + +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C KG   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ ++ +I   CK G+  +A  +F+EM+   + P++ TYN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G       L +EML   I  D++TYNALI    KEGK  +A  L  ++    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS++I G C +   + A  ++  M   GC PN   F  L+  +C  +  D   E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G +  G    A+ L ++M   GL P
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TY+++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  PN+ITFNTLI G+C   ++ +   +  EM  T +  +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------- 426
           LI+G+  VG+      L +EM+ +G+  DI+T + L+ GLC  GK K A  +        
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 427 KDLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           KDLD     N + P+  TY+ LI+G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++   M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AITYITLICGFRKVGNINGA 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + +  +       R+D A   +  M     SPN+ T N ++  +C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G +   TTYNTLI G    G L+ A+     M  +G+ P+++T +TL+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEI 536
            +  + +GL    K+EL  A+ +  K+++
Sbjct: 653 TIRNMLTGLWS--KEELKRAVAMLEKLQM 679



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +G  P V T+NTL+ G C +  +S A+   + M +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  + G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  A E+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  S +  G     + + A  +F  M  +G  P
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 11/350 (3%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            +P +   +  + SL    R   A   + EM+   I P+++T N ++  FC  G    A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++ + M      P V TYN LI+    +G    A +  + M   GI PN IT++++I GF
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+ +L  A  +F  M     SPN++T+NTLI+GY      + G  L  EM   G+  D 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            TYN LI G    G    A  L++++  + L P+  T   L+ G C     + A +++K 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 464 MIRS-----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           M +S           G  P+   + +L+S       F  A E+  EM  + + PD+I  S
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            +  GL    + + A ++F  M  +   P        IN   + G  + G
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 12/322 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + +   A   F  M   G  P + + N  +     ++R+D  +    E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +  T N ++H F  +G +  A+++ + M S G  P + T +TL+ G C+ G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 314 LSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           L  A++   +M+K           NG++P+V T+N LI G   +GK  EA  ++ EM   
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TY+++I+G  +    +    +++ M       +++T+  LI G CK G+    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++ +  +V NA TY  LI G     N   A  +++ MI SG  P+      +++ 
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 483 FCQNEDFDRAAEVLLEMLEKCM 504
               E+  RA   +LE L+  M
Sbjct: 661 LWSKEELKRAV-AMLEKLQMSM 681


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 227/500 (45%), Gaps = 37/500 (7%)

Query: 70  TLPEPKGQDLDFVNIA---YSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSL 124
           +LP+    D + V+++    S L   +W+K  +L   L      HV  L     D   +L
Sbjct: 26  SLPQILSLDSEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTAL 85

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
            FF W+         + ++S +L+IL + R    +E I   ++ S               
Sbjct: 86  SFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKS--------------- 130

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
               C S   + D+LF     RK   NA   F       F P +   N  L SL     +
Sbjct: 131 ----CCS---IEDVLFVLEVFRK--MNADGEF------KFKPTLRCYNTILMSLSKFLLI 175

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D     Y E+  N+ISPN+YT N +++ +CK+G +  A      +   G  P   TY +L
Sbjct: 176 DEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235

Query: 305 ISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           I GHC NKG+ + A +   +M + G Q N +++  LI G C+ G+++EA ++F++M   N
Sbjct: 236 ILGHCRNKGVDN-AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P V TY  LI      G      +L+ EM   G + ++ TY  LI GLCKE K  +A 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ ++ +  L+P+  TY+ALI G C     + AF++   M  + C PN   +  L+   
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+     +A  +L +MLE+ ++P  I  + L  G       E A +L   M   GL+P  
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 544 FDKLRTINCAPENGEKESGG 563
           +     I+   + G  E  G
Sbjct: 475 WTYSVFIDTLCKEGRVEEAG 494



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 173/353 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L        +   A   F  M +    P + +    + +L  S R   AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM+     PNV+T  +++   CK   ++ A ++   M   G IPSV TYN LI G+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A +  +LME N   PN  T+N LI G CKK K+H+A  + ++M    +SP++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN+LI+G  +V + E    L   M  NG+  D  TY+  I  LCKEG+ ++A  L   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    +  N   Y+ALI G C     + A+ L + M+   C PN + + +L+   C+ + 
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A+ ++ +ML   + P  +  + L   +   G  + A+K+F  M   G  P
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 2/389 (0%)

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
            R   S  +++ G+ ++   +   KLF  +  +   C  +   + +L    +   +   A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADM--TEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
            + F +M++ G  P + +    +  L    ++D A     EM    + P+V T N ++  
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           +CK G+I+ A E+   MES    P+  TYN LI G C K  +  AM   N M +  + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           +IT+N+LI G CK   L  A R+ S M    + P+  TY+  I+   + G  E   +L++
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            +   G+K + + Y ALI G CK GK   A  L++ +  ++ +PN+ TY+ LI G C  K
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             + A  L   M+  G +P    + +L+    ++  FD A +V   M+     PD    +
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    G  E    +  KM   G+LP
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILP 647



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 163/354 (46%), Gaps = 2/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   + +L        K   A     +M + G +P + + N  +        +D A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M  N   PN  T N ++   CK   + +A+ +   M      PS+ TYN+LI G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A +  +LM +NG+ P+  T++  I   CK+G++ EA  +F  +KA  V  N 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y  LI+GY +VG  ++  SL E ML +    +  TYN LI GLCKE K K+A+ LV  
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 429 LDKNSLVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +    + P   TY+ LI G+ ++  + + A +++  M+  G +P+   +   +  +    
Sbjct: 570 MLTMGVKPTVVTYTILI-GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +   +V+ +M E+ + PD +  + L  G    G    A    + M   G  P
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 162/343 (47%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +   K   NA + F  M   G      S    +  L ++ R++ AL  + +M  + 
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P V T  ++++A    G    A+ +F  M+  G  P+V TY  LI G C +  +  A 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M + G+ P+V+T+N LI G+CK+G + +A  I   M++ +  PN  TYN LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +        +L  +ML   +   ++TYN+LI G CK    + A  L+  +++N LVP+ 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS  I   C     E A  L+ S+   G + N+ I+  L+  +C+    D A  +L  
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML     P+S   + L  GL    K + A  L  KM   G+ P
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 162/391 (41%), Gaps = 24/391 (6%)

Query: 151 TKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
            K +  K++E I   ++D        D+   L + +L     C  +   +++L +     
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND--ACLPNSYTYNVLIEGLCKE 557

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           KK + A+    +M   G  P + +    +  +L     D AL  +  M      P+V T 
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
              +HA+   G++E   +V   M   G +P + TY  LI G+   GL   A  F   M  
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHE------------------ANRIFSEMKATNVSPNV 368
            G +P++   + LI     + ++ E                  A ++F +M     + +V
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDV 737

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             Y  LI G+ Q    E    L   M   G+      YN+L+   CK G   +A  LV  
Sbjct: 738 SIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDA 797

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +N L+P   +Y  L+ G  +  ++E+A  ++  ++  G   ++  +++L+    + + 
Sbjct: 798 MVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDL 857

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            D  +E++  M EK   P+ +  S L  GL 
Sbjct: 858 VDECSELIDIMEEKGCQPNPLTYSLLIEGLE 888



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 144/352 (40%), Gaps = 53/352 (15%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D+A    + M  +   PN YT N+++   CK   ++ A  +   M +MG  P+V TY 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI      G    A+K  N M   G QP+V T+   +  +  +G L E + + ++M   
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 363 NVSPNVVTYNTLINGYGQ------------------------------------------ 380
            + P++VTY  LI+GY +                                          
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703

Query: 381 --------VGNS---EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                   V N+   E+   L+E+M+ +G  +D+  Y ALI G C++ + ++A  LV  +
Sbjct: 704 RSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 763

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  + P+   Y++L+   C       A +L  +M+ +G  P    +++L+         
Sbjct: 764 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSN 823

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++A  V   +L      D +    L  GL      +   +L   ME +G  P
Sbjct: 824 EKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQP 875



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 139/330 (42%), Gaps = 28/330 (8%)

Query: 141 ETHSIVLHILTKNRK-FKSSESILRG-ILDSDSFDLPSKLFD---SILYSYRMCDSSPLV 195
           E  S+V  +LT   K    + +IL G +L   +FD   K+F+   S+ Y   +C      
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC-----T 616

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +      Y  +       D   +M + G LP + +    +           A  F K M 
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 256 RNRISPNVYTLNMVMHAFC----------KLGI--------IERAVEVFKNMESMGFIPS 297
                P++Y +++++              ++GI         E A+++F+ M   G    
Sbjct: 677 DTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTID 736

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V+ Y  LI+G C +  L  A    + M++ G+ P+   +N+L+   CK G   EA R+  
Sbjct: 737 VSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVD 796

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    + P + +Y  L+ G    G++E   +++  +L  G   D + +  LI GL K  
Sbjct: 797 AMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRD 856

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITG 447
              + + L+  +++    PN  TYS LI G
Sbjct: 857 LVDECSELIDIMEEKGCQPNPLTYSLLIEG 886


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 214/446 (47%), Gaps = 4/446 (0%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           +ST L P  V+ VLL    D  L+L FF ++  HK  + +  +  I++H L     F  +
Sbjct: 65  ISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIHALVNANLFWPA 124

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
            S+L+ +L     D P ++F+++L  +  CD  S L FDLL ++Y   K+  ++   F  
Sbjct: 125 SSLLQTLLLRGGLD-PREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRL 183

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR    +P + +  + L+ L    RVD+ L  + E+    I P++Y    V+ +FC+L  
Sbjct: 184 MRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKN 243

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             +A E+ + MES     +V  YN LI G C    +  A++ KN + + G+  + +T+ T
Sbjct: 244 FAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCT 301

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK  +      +  EM      P     ++L+ G  + G       L   + + G
Sbjct: 302 LVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
               +  YNALI  LCK+GK  +A  L K++ +  L  N  TYS LI   C R   + A 
Sbjct: 362 AMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAI 421

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                MI +G +   + +  L++  C+  +   A     EM++K + P  +  + L SG 
Sbjct: 422 HFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGY 481

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
            + GK   A +L+ +M  +G+ P  +
Sbjct: 482 CNKGKLHEAFRLYHEMTGKGIAPNTY 507



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 195/407 (47%), Gaps = 21/407 (5%)

Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------------D 170
           +Q  + S L +  +++++H L KN++   +  I  G++                      
Sbjct: 251 IQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQ 310

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
            F++ + + D ++    +   + L    L +    + K  +A D   +++  G +P +  
Sbjct: 311 EFEVGAGVMDEMIELGFVPTEAAL--SSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  ++SL    + D A   +KEM    +  N  T ++++ +FC+ G ++ A+     M 
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G   +V  YN+LI+GHC  G LS A+ F + M   G++P V+++ +LI G+C KGKLH
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA R++ EM    ++PN  T+ TLI+   +         L++EML   +  + +TYN +I
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G CKEG T KA  L+  + +  LVP+  TY  LI+  C       A +    + R   +
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            N+  +  L+  +C+      A  V  EM+++ +  D +  + L  G
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDG 655



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 164/350 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S  V++ L  +     KF  A   F +M + G      + +  + S     ++D A+ F 
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M    I   VY  N +++  CKLG +  AV  F  M   G  P+V +Y +LISG+CNK
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A +  + M   GI PN  TF TLI    +  ++ +A R+F EM   N+ PN VTY
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I G+ + GN+     L  +M++ G+  D  TY  LI  LC  G+  +A   + DL +
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
                N   YSAL+ G C       A  + + M++ G   +   + +L+    + +D   
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +L  M ++ + PD +I + +  G    G  + A  ++  M   G  P
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTP 714



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 154/329 (46%), Gaps = 1/329 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M D G  P + S    +S   +  ++  A   Y EM    I+PN YT   ++ 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A  +   +  A  +F  M     +P+  TYN +I GHC +G    A +  N M + G+ P
Sbjct: 515 ALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVP 574

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +  T+  LI   C  G++ EA +   ++   +   N + Y+ L++GY + G       + 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVC 634

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM++ G+ +D++ Y  LI G  KE  T     L+K++    L P+   Y+++I G    
Sbjct: 635 REMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKA 694

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + ++AF ++  MI  GC PN   +  L++  C+    D+A  +  EML     P+ +  
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLL 540
                 L   G  E A++L   M ++GLL
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDM-LKGLL 782



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 174/384 (45%), Gaps = 42/384 (10%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           +D+F    +LFD +L    M   + + ++++ + +        A +   QM   G +P  
Sbjct: 523 TDAF----RLFDEMLEQNMM--PNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG----------- 277
            +    +SSL  + RV  A  F  ++ R     N    + ++H +CK G           
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636

Query: 278 IIERAVE------------------------VFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +++R V+                        + KNM      P    Y ++I G+   G 
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    ++M   G  PN++T+ TLI   CK G + +A  ++ EM  +N +PN VTY  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            ++   + G+ E    L+ +ML+ G+  + ++YN L+ G CK G+ ++A  L+ ++  N+
Sbjct: 757 FLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TYS +I   C R N + A + + +M+  G +P+   +  L+   C   +  +A 
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAF 875

Query: 494 EVLLEMLEKCMAPDSIILSELYSG 517
           E+  +M+ + + P+      L  G
Sbjct: 876 ELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/378 (25%), Positives = 167/378 (44%), Gaps = 36/378 (9%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y ++ K   A   + +M   G  P   +    +S+L  + R+  A   + EM    
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN  T N+++   CK G   +A E+   M   G +P   TY  LIS  C+ G +  A 
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS------------- 365
           KF + + +   + N + ++ L+ G+CK+G+L +A  +  EM    V              
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGT 656

Query: 366 ----------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
                                 P+ V Y ++I+GY + G+ +    +++ M+  G   +I
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TY  LI  LCK G   KA  L K++  ++  PN  TY   +       + E+A QL+  
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHND 776

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M++ G   N   + +L+  FC+    + A ++L EM++  + PD I  S +       G 
Sbjct: 777 MLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGN 835

Query: 524 DELAMKLFRKMEIRGLLP 541
            + A++ +  M  +GL P
Sbjct: 836 LDGAIEFWDTMLNKGLKP 853


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 204/451 (45%), Gaps = 63/451 (13%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLE--THSIVLHILTKNRKFKSSESILRGILDSD 170
           L+K +KD   +L  F        +    +  T   ++H L    +F+ +E +L  +   D
Sbjct: 21  LIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQED 80

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
                             C+ +  VF  + + Y    +  +A   F +M D+   P  +S
Sbjct: 81  ------------------CEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKS 122

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIERAVEVFKNM 289
                  L++   V  A+GFYKEMR   I P V +LN+++ A CK    +E A  +F+ M
Sbjct: 123 YLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREM 182

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            + G  P   TY TLI+G C  G +S A +  + ME+ G+ P+V+++ +LI G C+   L
Sbjct: 183 PNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNL 242

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    + PNV TY++L++G  + G+S     L E M+R  +  +++TY+ L
Sbjct: 243 DEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTL 302

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE-------------- 455
           I GLCKEGK ++A  ++  +    L P+A  Y  +I+G C   N +              
Sbjct: 303 INGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGI 362

Query: 456 ----------------------------RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
                                       RAFQLY SM   G       F+ L+  FC+  
Sbjct: 363 SPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRG 422

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           D ++AA +L EM+     PD  + + L  GL
Sbjct: 423 DLNKAARILEEMILDGCIPDEGMWNVLMCGL 453



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 7/281 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C      +  L        K   A +   +M + G  P + S    +  L  S  +D 
Sbjct: 185 RGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDE 244

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   +EM  N I PNV+T + +M   CK G   +A+E+ + M     +P++ TY+TLI+
Sbjct: 245 AIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLIN 304

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G    A++  + M   G++P+   +  +I G C      EA     EM    +SP
Sbjct: 305 GLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISP 364

Query: 367 N-------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           N       V  +N ++ G     +      LY  M   GI V+I T++ L+   CK G  
Sbjct: 365 NRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDL 424

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            KAA +++++  +  +P+   ++ L+ G   RK      +L
Sbjct: 425 NKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTEL 465



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 99/219 (45%), Gaps = 1/219 (0%)

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           NG + +  TF  +I       +   A  +   MK  +       + T+  GYG+V     
Sbjct: 44  NGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLD 103

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              ++ +M    +K    +Y  +   L +E   K+A    K++ +  + P   + + LI 
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIK 163

Query: 447 GQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
             C  + + E AF+L++ M   GC+P+ + +  L++  C+     +A E+L EM EK ++
Sbjct: 164 ALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLS 223

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P  +  + L  GL      + A++L  +M I G+ P  F
Sbjct: 224 PSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVF 262


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 227/500 (45%), Gaps = 37/500 (7%)

Query: 70  TLPEPKGQDLDFVNIA---YSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSL 124
           +LP+    D + V+++    S L   +W+K  +L   L      HV  L     D   +L
Sbjct: 26  SLPQILSLDSEPVDLSAQLLSILSRPNWQKHPSLRKLLPSLTPSHVSSLFAFNLDPQTAL 85

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
            FF W+         + ++S +L+IL + R    +E I   ++ S               
Sbjct: 86  SFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKS--------------- 130

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
               C S   + D+LF     RK   NA   F       F P +   N  L SL     +
Sbjct: 131 ----CCS---IEDVLFVLEVFRK--MNADGEF------KFKPTLRCYNTILMSLSKFLLI 175

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D     Y E+  N+ISPN+YT N +++ +CK+G +  A      +   G  P   TY +L
Sbjct: 176 DEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSL 235

Query: 305 ISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           I GHC NKG+ + A +   +M + G Q N +++  LI G C+ G+++EA ++F++M   N
Sbjct: 236 ILGHCRNKGVDN-AYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P V TY  LI      G      +L+ EM   G + ++ TY  LI GLCKE K  +A 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ ++ +  L+P+  TY+ALI G C     + AF++   M  + C PN   +  L+   
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+     +A  +L +MLE+ ++P  I  + L  G       E A +L   M   GL+P  
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 544 FDKLRTINCAPENGEKESGG 563
           +     I+   + G  E  G
Sbjct: 475 WTYSVFIDTLCKEGRVEEAG 494



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 173/353 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L        +   A   F  M +    P + +    + +L  S R   AL
Sbjct: 260 CQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL 319

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM+     PNV+T  +++   CK   ++ A ++   M   G IPSV TYN LI G+
Sbjct: 320 NLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGY 379

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A +  +LME N   PN  T+N LI G CKK K+H+A  + ++M    +SP++
Sbjct: 380 CKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSL 439

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN+LI+G  +V + E    L   M  NG+  D  TY+  I  LCKEG+ ++A  L   
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    +  N   Y+ALI G C     + A+ L + M+   C PN + + +L+   C+ + 
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKK 559

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A+ ++ +ML   + P  +  + L   +   G  + A+K+F  M   G  P
Sbjct: 560 MKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQP 612



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 2/389 (0%)

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
            R   S  +++ G+ ++   +   KLF  +  +   C  +   + +L    +   +   A
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADM--TEDNCCPTVRTYTVLIYALSGSGRKVEA 318

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
            + F +M++ G  P + +    +  L    ++D A     EM    + P+V T N ++  
Sbjct: 319 LNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDG 378

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           +CK G+I+ A E+   MES    P+  TYN LI G C K  +  AM   N M +  + P+
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           +IT+N+LI G CK   L  A R+ S M    + P+  TY+  I+   + G  E   +L++
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            +   G+K + + Y ALI G CK GK   A  L++ +  ++ +PN+ TY+ LI G C  K
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             + A  L   M+  G +P    + +L+    ++  FD A +V   M+     PD    +
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    G  E    +  KM   G+LP
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILP 647



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 163/354 (46%), Gaps = 2/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   + +L        K   A     +M + G +P + + N  +        +D A 
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAF 389

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M  N   PN  T N ++   CK   + +A+ +   M      PS+ TYN+LI G 
Sbjct: 390 EILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQ 449

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A +  +LM +NG+ P+  T++  I   CK+G++ EA  +F  +KA  V  N 
Sbjct: 450 CKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANE 509

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y  LI+GY +VG  ++  SL E ML +    +  TYN LI GLCKE K K+A+ LV  
Sbjct: 510 VIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569

Query: 429 LDKNSLVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +    + P   TY+ LI G+ ++  + + A +++  M+  G +P+   +   +  +    
Sbjct: 570 MLTMGVKPTVVTYTILI-GEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQG 628

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +   +V+ +M E+ + PD +  + L  G    G    A    + M   G  P
Sbjct: 629 MLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 162/343 (47%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +   K   NA + F  M   G      S    +  L ++ R++ AL  + +M  + 
Sbjct: 235 LILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDN 294

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P V T  ++++A    G    A+ +F  M+  G  P+V TY  LI G C +  +  A 
Sbjct: 295 CCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEAR 354

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M + G+ P+V+T+N LI G+CK+G + +A  I   M++ +  PN  TYN LI G 
Sbjct: 355 KMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGL 414

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +        +L  +ML   +   ++TYN+LI G CK    + A  L+  +++N LVP+ 
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS  I   C     E A  L+ S+   G + N+ I+  L+  +C+    D A  +L  
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML     P+S   + L  GL    K + A  L  KM   G+ P
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKP 577



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 5/293 (1%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K  +RN +S   YT N++ H  C+ G I  A+++F +M      P+V TY  LI      
Sbjct: 258 KGCQRNEVS---YT-NLI-HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGS 312

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A+   N M++ G +PNV T+  LI G CK+ K+ EA ++ SEM    + P+VVTY
Sbjct: 313 GRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTY 372

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI+GY + G  +    + + M  N    +  TYN LI GLCK+ K  KA  L+  + +
Sbjct: 373 NALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLE 432

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L P+  TY++LI GQC   + E A++L   M  +G  P++  + + + T C+    + 
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           A  +   +  K +  + +I + L  G    GK ++A  L  +M     LP  +
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY 545



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/301 (26%), Positives = 138/301 (45%), Gaps = 10/301 (3%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D+A    + M  +   PN YT N+++   CK   ++ A  +   M +MG  P+V TY 
Sbjct: 524 KIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYT 583

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI      G    A+K  N M   G QP+V T+   +  +  +G L E + + ++M   
Sbjct: 584 ILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEE 643

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK-- 420
            + P++VTY  LI+GY ++G +       + M+  G K  +   + LI  L  E + K  
Sbjct: 644 GILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKET 703

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           ++   +  +   + V  A  +  L          E A +L++ M+  GC  +  I+  L+
Sbjct: 704 RSEIGIDSVSNVNSVDIADVWKTL--------EYEIALKLFEKMVEHGCTIDVSIYGALI 755

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + FCQ E  + A  ++  M E+ M+P   I + L       G    A++L   M   GLL
Sbjct: 756 AGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLL 815

Query: 541 P 541
           P
Sbjct: 816 P 816



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/398 (23%), Positives = 168/398 (42%), Gaps = 37/398 (9%)

Query: 151 TKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
            K +  K++E I   ++D        D+   L + +L     C  +   +++L +     
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND--ACLPNSYTYNVLIEGLCKE 557

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           KK + A+    +M   G  P + +    +  +L     D AL  +  M      P+V T 
Sbjct: 558 KKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTY 617

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
              +HA+   G++E   +V   M   G +P + TY  LI G+   GL   A  F   M  
Sbjct: 618 TAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVD 677

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G +P++   + LI     + ++ E     SE+   +VS NV + +  I    +    E+
Sbjct: 678 TGCKPSLYIVSILIKNLSHENRMKETR---SEIGIDSVS-NVNSVD--IADVWKTLEYEI 731

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L+E+M+ +G  +D+  Y ALI G C++ + ++A  LV  + +  + P+   Y++L+ 
Sbjct: 732 ALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLD 791

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C       A +L  +M+ +G  P    +++L+         ++A  V           
Sbjct: 792 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAV----------- 840

Query: 507 DSIILSELYSGLHHCG--KDELAMKLFRKMEIRGLLPK 542
                   + GL  CG   DE+A K+     I GLL +
Sbjct: 841 --------FHGLLSCGYNYDEVAWKVL----IDGLLKR 866



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 74/353 (20%), Positives = 139/353 (39%), Gaps = 39/353 (11%)

Query: 141 ETHSIVLHILTKNRK-FKSSESILRG-ILDSDSFDLPSKLFD---SILYSYRMCDSSPLV 195
           E  S+V  +LT   K    + +IL G +L   +FD   K+F+   S+ Y   +C      
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC-----T 616

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +      Y  +       D   +M + G LP + +    +           A  F K M 
Sbjct: 617 YTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMV 676

Query: 256 RNRISPNVYTLNMVMHAFC----------KLGI-------------------IERAVEVF 286
                P++Y +++++              ++GI                    E A+++F
Sbjct: 677 DTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLF 736

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M   G    V+ Y  LI+G C +  L  A    + M++ G+ P+   +N+L+   CK 
Sbjct: 737 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 796

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G   EA R+   M    + P + +Y  L+ G    G++E   +++  +L  G   D + +
Sbjct: 797 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 856

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             LI GL K     + + L+  +++      A    A +       +++ A +
Sbjct: 857 KVLIDGLLKRDLVDECSELIDIMEEKDATAQADIACAALMRLAAANSTKGALE 909


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 192/384 (50%), Gaps = 3/384 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+  +I++G ++    D   ++ + ++     C  S +  +++   +    +  +A +  
Sbjct: 225 KTFTTIMQGYIEEGDLDGALRIREQMVEFG--CSWSNVSVNVIVHGFCKEGRVEDALNFI 282

Query: 217 CQMRDY-GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
            +M +  GF P   + N  ++ L  +  V  A+     M +    P+VYT N V+   CK
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           LG ++ AVE    M +    P+  TYNTLIS  C +  +  A +   ++   GI P+V T
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           FN+LI G C       A  +F EM++    P+  TYN LI+     G  +   ++ ++M 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G    ++TYN LI G CK  K ++A  +  +++ + +  N+ TY+ LI G C  +  E
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A QL   MI  G +P+K  +  L++ FC+  D  +AA+++  M      PD +    L 
Sbjct: 523 DASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582

Query: 516 SGLHHCGKDELAMKLFRKMEIRGL 539
           SGL   G+ E+A KL R ++++G+
Sbjct: 583 SGLCKAGRVEVASKLLRSIQMKGI 606



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/316 (33%), Positives = 157/316 (49%), Gaps = 1/316 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A +   QM      P   + N  +S+L    +V+ A    + +    I P+V T N
Sbjct: 345 EVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   C       A+E+F+ M S G  P   TYN LI   C+KG L  A+     ME +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G   +VIT+NTLI GFCK  K+ EA  IF EM+   VS N VTYNTLI+G  +    E  
Sbjct: 465 GCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           + L ++M+  G K D  TYN+L+   C+ G  KKAA +V+ +  N   P+  TY  LI+G
Sbjct: 525 SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAP 506
            C     E A +L +S+   G     H +  ++    +      A  +  EMLE+   AP
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAP 644

Query: 507 DSIILSELYSGLHHCG 522
           D++    ++ GL + G
Sbjct: 645 DAVSYRIVFRGLCNGG 660



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 173/346 (50%), Gaps = 2/346 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + ++ L  T     +   AT+    +   G LP + + N  +  L  +    +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EMR     P+ +T NM++ + C  G ++ A+ + K ME  G   SV TYNTLI 
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +  A +  + ME +G+  N +T+NTLI G CK  ++ +A+++  +M      P
Sbjct: 479 GFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKP 538

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TYN+L+  + + G+ +  A + + M  NG + DI+TY  LI GLCK G+ + A+ L+
Sbjct: 539 DKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQ 485
           + +    +      Y+ +I G   ++ +  A  L++ M+ ++   P+   + ++    C 
Sbjct: 599 RSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCN 658

Query: 486 NEDFDR-AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
                R A + L+E+LEK   P+   L  L  GL     +E  +KL
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 185/381 (48%), Gaps = 4/381 (1%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E IL  +  S SFD   K+ + +  S     +SP  F +L ++YA  +           M
Sbjct: 87  EEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSP--FLILIESYAQFELQDEILGVVHWM 144

Query: 220 -RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
             D+G  P     N+ L+ L+D   + +    + +M    I P+V T N+++ A C+   
Sbjct: 145 IDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+ + ++M S G +P   T+ T++ G+  +G L  A++ +  M + G   + ++ N 
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 339 LIFGFCKKGKLHEANRIFSEMKATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           ++ GFCK+G++ +A     EM   +   P+  T+NTL+NG  + G+ +    + + ML+ 
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+ TYN++I GLCK G+ K+A   +  +      PN  TY+ LI+  C     E A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L + +   G  P+   F  L+   C   +   A E+  EM  K   PD    + L   
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 518 LHHCGKDELAMKLFRKMEIRG 538
           L   GK + A+ + ++ME+ G
Sbjct: 445 LCSKGKLDEALNMLKQMELSG 465



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 169/339 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L          ++A +    M   G+ P + + N  +S L     V  A+ F  +M 
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SPN  T N ++   CK   +E A E+ + + S G +P V T+N+LI G C      
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +AM+    M   G +P+  T+N LI   C KGKL EA  +  +M+ +  + +V+TYNTLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ +         +++EM  +G+  + +TYN LI GLCK  + + A+ L+  +      
Sbjct: 478 DGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQK 537

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++L+T  C   + ++A  + ++M  +GC P+   +  L+S  C+    + A+++
Sbjct: 538 PDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L  +  K +A      + +  GL    K   A+ LFR+M
Sbjct: 598 LRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREM 636



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/269 (19%), Positives = 107/269 (39%), Gaps = 43/269 (15%)

Query: 315 SLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT----------- 362
           S A++  NL  K     P    +  ++    + G   +  +I  +MK +           
Sbjct: 64  SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLI 123

Query: 363 -------------------------NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
                                     + P+   YN ++N      N ++    + +M   
Sbjct: 124 LIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVW 183

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIK D+ T+N LI  LC+  + + A  +++D+    LVP+  T++ ++ G     + + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML-EKCMAPDSIILSELYS 516
            ++ + M+  GC  +     +++  FC+    + A   + EM  +    PD    + L +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           GL   G  + A+++   M     L +G+D
Sbjct: 304 GLCKAGHVKHAIEIMDVM-----LQEGYD 327


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 195/394 (49%), Gaps = 2/394 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S   ++ G+     FD   +L + +  S      S   ++ L + +  ++ F  A D   
Sbjct: 244 SYNVLVNGLSGKGEFDRAKELIEQM--SMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRR 301

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP + + N  + SL    RV  A  +   M    + P++ + N +++ + +LG
Sbjct: 302 EMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLG 361

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
               A+ +F  + S   +PSV TYNTLI G C  G L +A   K+ M K+G+ P+V+TF 
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ GFC+ G L  A  +F EM +  + P+ + Y T I G  ++GN      + EEM   
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAE 481

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D++TYN LI GLCK G    A  LV+ +    +VP+  TY+++I    +     +A
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++  M++ G  P+   + +L+ ++      D A +   EM +K ++P+ I  + L  G
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYG 601

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           L      ++A  LF +ME +G+ P  +     IN
Sbjct: 602 LCKENMMDVAYNLFAEMESKGVSPNKYTYTILIN 635



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 203/433 (46%), Gaps = 7/433 (1%)

Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI-VLHILTKNRKFKSSESILRGILDSD 170
           VL  V+   + +L FF WV+  +P+    ET  + +L IL KN   K +  ++   ++  
Sbjct: 57  VLNSVKHRPLTALRFFRWVEK-QPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIE-- 113

Query: 171 SFDLPSKLFDSI--LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
              +   + D +  +   R  + S  + DLL + +A +         F +M + G LP +
Sbjct: 114 -VKVDGGVLDVLVGIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDV 172

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            +CN+ L  L D   V+     Y  M + +I P + T N +M + CK G + RAVEV   
Sbjct: 173 RNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDV 232

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   G  P+  +YN L++G   KG    A +    M   G++ +  T+N LI GFCKK  
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEM 292

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             EAN +  EM      P VVTYNT++    ++G         + M+   +  D+++YN 
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G  + G   +A  L  +L   +LVP+  TY+ LI G C   N + A  +   MI+ G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   F +L+  FCQ  +   A E+  EML + + PD I  +    G    G    A 
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 529 KLFRKMEIRGLLP 541
            +  +M+  G  P
Sbjct: 473 GMKEEMKAEGFPP 485



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 186/360 (51%), Gaps = 12/360 (3%)

Query: 189 CDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           C   P +  F+ +  +     +   A +    MR +G  P   S N  ++ L      D 
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    ++M    +  + +T N ++  FCK  + E A ++ + M   G +P+V TYNT++ 
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C  G +S A ++ ++M    + P+++++NTLI+G+ + G   EA  +FSE+++ N+ P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYNTLI+G  + GN ++   + ++M+++G+  D++T+  L+ G C+ G    A  L 
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    L P+   Y+  I G+    N  +AF + + M   G  P+   + +L++  C+ 
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 487 EDFDRAAEVLLEMLEKCMAPD-----SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +FD A E++ +M  + + PD     SII + L SGL    ++     +F  M  +G+ P
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEE-----VFSDMLKKGIHP 555



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 161/337 (47%), Gaps = 3/337 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y+    F  A   F ++R    +P + + N  +     +  +DIA G   +M 
Sbjct: 350 YNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMI 409

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++ + P+V T  +++  FC++G +  A E+F  M S G  P    Y T I G    G  S
Sbjct: 410 KHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPS 469

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A   K  M+  G  P++IT+N LI G CK G   +AN +  +M+   + P+ VTY ++I
Sbjct: 470 KAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSII 529

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + +   G       ++ +ML+ GI   ++TY  LI      G+   A     ++    + 
Sbjct: 530 HAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVS 589

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ALI G C     + A+ L+  M   G  PNK+ + +L++     + +  A ++
Sbjct: 590 PNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKL 649

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             +ML++ + PDS   S L   + H  KD   + + R
Sbjct: 650 YKDMLDREIKPDSCTHSAL---MKHLSKDYKLLAVLR 683



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 2/133 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + + +L  +YA R +   A   F +M+D G  P + + N  +  L     +D+A   +
Sbjct: 556 SVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLF 615

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    +SPN YT  ++++    L   + A++++K+M      P   T++ L+  H +K
Sbjct: 616 AEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK-HLSK 674

Query: 312 GLLSLA-MKFKNL 323
               LA ++ +NL
Sbjct: 675 DYKLLAVLRLENL 687


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/345 (30%), Positives = 177/345 (51%), Gaps = 35/345 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L SL+ S+     L   ++M    I PN+   N++++ FC+LG+I  A  VF  +  
Sbjct: 89  NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKN----------------------------- 322
           MG++P   T+ TL  G C KG +  A  F +                             
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 323 ---LMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
              L+++   N +QPNV+ +NT+I   CK   ++EA  +FSEM +  +SP+VVTY+ LI+
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALIS 268

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +G  +    L+ +M+   IK D+ T+N L+   CK+GK K+   +   + K  + P
Sbjct: 269 GFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY++L+ G C+ K   +A  ++ +M + G  P+   + ++++ FC+ + FD A  + 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            EM  K + PD +  S L  GL   G+   A++L  +M  RG+ P
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 149/292 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +  N + PNV   N ++ + CK+ ++  A ++F  M S G  P V TY+ LIS
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALIS 268

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A+   N M    I+P+V TFN L+  FCK GK+ E   +F  M    + P
Sbjct: 269 GFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N VTYN+L++GY  V       S++  M + G+  DI +Y+ +I G CK  K  +A  L 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++ + +++P+  TYS+LI G         A QL   M   G  PN   +  ++   C+ 
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKT 448

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              D+A  +L +  +K   PD    S L  GL   GK E A K+F  + ++G
Sbjct: 449 HQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 177/346 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    K    A D F +M   G  P + + +  +S      ++  A+  + +
Sbjct: 226 VMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNK 285

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+VYT N++++AFCK G ++    VF  M   G  P+  TYN+L+ G+C    
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    N M + G+ P++ +++ +I GFCK  K  EA  +F EM   N+ P+VVTY++
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L ++M   G+  +I TYN+++  LCK  +  KA  L+       
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+ STYS LI G C     E A ++++ ++  G   + + + +++  FC    F+ A 
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +L +M +    PD+     +   L    ++++A KL R+M  RGL
Sbjct: 526 ALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 162/318 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + S+   + V+ A   + EM    ISP+V T + ++  FC LG ++ A+++
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDL 282

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P V T+N L++  C  G +       ++M K GI+PN +T+N+L+ G+C 
Sbjct: 283 FNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCL 342

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++++A  IF+ M    V+P++ +Y+ +ING+ ++   +   +L++EM R  I  D++T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++LI GL K G+   A  LV  +    + PN  TY++++   C     ++A  L     
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G +P+   + +L+   CQ+   + A +V  ++L K    D    + +  G    G   
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A+ L  KME  G +P  
Sbjct: 523 EALALLSKMEDNGCIPDA 540



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 8/341 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLS------SLLDSERVDIALGFYKEMRRNRIS 260
           KKF++    F +   + F+P   S   F+S      +   +  VD A+  +  + R   +
Sbjct: 25  KKFQSFQ--FLKNTHFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTT 82

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P  +  N ++ +  K       + + + ME  G  P++   N LI+  C  GL+  A   
Sbjct: 83  PPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 142

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              + K G  P+ ITF TL  G C KG++ +A     ++ A     + ++Y TLI+G  +
Sbjct: 143 FAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCK 202

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           VG +     L + +  N ++ +++ YN +I  +CK     +A  L  ++    + P+  T
Sbjct: 203 VGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVT 262

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YSALI+G C+    + A  L+  MI    +P+ + F +L++ FC++        V   M+
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++ + P+ +  + L  G     +   A  +F  M   G+ P
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 4/271 (1%)

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           + FI   +T  T    H N  +      F  L+ +N   P    FN ++    K    H 
Sbjct: 48  INFISYSSTSTTF---HSNNDVDDAVSLFNRLLRRNTTPP-AFEFNKILGSLVKSKHYHT 103

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +  +M+   + PN+V  N LIN + Q+G      S++ ++L+ G   D +T+  L  
Sbjct: 104 VLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSK 163

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC +G+ ++A      +       +  +Y  LI G C    +  A  L + +  +  +P
Sbjct: 164 GLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQP 223

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N  ++  ++ + C+ +  + A ++  EM+ K ++PD +  S L SG    GK + A+ LF
Sbjct: 224 NVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLF 283

Query: 532 RKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            KM +  + P  +     +N   ++G+ + G
Sbjct: 284 NKMILENIKPDVYTFNILVNAFCKDGKMKEG 314


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 173/353 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      + ++  +         A D F +M   G LP +   +  +  L    R+  AL
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 201

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+KEM    IS +VYT N ++H   + G+ +        M   GF P   T+  LI G 
Sbjct: 202 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 261

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A +   LM   G +P+++T+NTL+ G C  G+L +A ++F  +    +  NV
Sbjct: 262 CKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 321

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            +YN LINGY +    +    L+EEM   G+K   +TYN LI  LC+ G+ + A  L  +
Sbjct: 322 FSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +         STY  L+ G C   + E A  L++S+ ++  +PN  +F +L+   C+   
Sbjct: 382 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 441

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A +   E+ +  + PD+I  + L +GL + G    A+KL  +ME +G LP
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 494



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 36/366 (9%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A   F +M + G     ++    ++ L  + +  +A+  +++M+ N    +V+T  M++
Sbjct: 95  DAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMII 153

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            + CK G+   A+++F  M   G +P V  Y++L+ G C  G L  A++F   ME  GI 
Sbjct: 154 DSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 213

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            +V T+N+LI G  + G   E     + M     SP+  T+  LI+G  + G       +
Sbjct: 214 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 273

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            E M   G + DILTYN L+ GLC  G+ + A  L + L    +  N  +Y+ LI G C 
Sbjct: 274 LELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 333

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM----------- 499
            +  + AF+L++ M   G +P+   +  L+   CQ+     A ++ +EM           
Sbjct: 334 DQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393

Query: 500 -------------LEKCM-----------APDSIILSELYSGLHHCGKDELAMKLFRKME 535
                        LE+ +            P+  + S L  G+   GK E A K F ++ 
Sbjct: 394 YCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 453

Query: 536 IRGLLP 541
             GL P
Sbjct: 454 KNGLEP 459



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 146/296 (49%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D GF P   +    +  L    +V  A    + M      P++ T N +M+  C +G 
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A ++F+++   G   +V +YN LI+G+C    +  A +    M   G++P+ +T+NT
Sbjct: 302 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNT 361

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   C+ G++  A ++F EM+       + TY  L++G  + G+ E    L++ + +  
Sbjct: 362 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTE 421

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            K +I  ++ L+ G+C+ GK ++A     ++ KN L P+   Y+ LI G C +     A 
Sbjct: 422 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 481

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           +L   M   GC P+   F +++    +  +   A ++L EM  +  +PD  + S L
Sbjct: 482 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 36/313 (11%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+  T+  ++        I  AV++F  M   G      TY  LI+G C      LA+K 
Sbjct: 75  PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M+ N  + +V T+  +I   CK G   EA  +FSEM    + P+VV Y++L++G  +
Sbjct: 135 HEKMKGN-CKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALIL----------------------------- 411
            G  +     ++EM   GI  D+ TYN+LI                              
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253

Query: 412 ------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
                 GLCKEGK  +A  +++ +      P+  TY+ L+ G C+    E A +L++S+ 
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G + N   + +L++ +C+++  D A  +  EM  K + P ++  + L   L   G+  
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373

Query: 526 LAMKLFRKMEIRG 538
            A KLF +M+  G
Sbjct: 374 TAQKLFVEMQTCG 386



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 161/358 (44%), Gaps = 19/358 (5%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           +LEFF  ++    S+  + T++ ++H L++   +K     L  ++D              
Sbjct: 200 ALEFFKEMEGRGISA-DVYTYNSLIHGLSRAGLWKEVTWFLNLMVD-------------- 244

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
               R        F +L        K   A      M   G  P I + N  ++ L    
Sbjct: 245 ----RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG 300

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +++ A   ++ +    I  NV++ N++++ +CK   I+ A  +F+ M   G  PS  TYN
Sbjct: 301 QLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYN 360

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLI   C  G +  A K    M+  G    + T+  L+ G CK G L EA  +F  +K T
Sbjct: 361 TLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKT 420

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN+  ++ L++G  + G  E     ++E+ +NG++ D + YN LI GLC +G   +A
Sbjct: 421 EHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEA 480

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             L+  +++   +P++ T++ +I           A QL + M      P++ +  ML+
Sbjct: 481 VKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 226/507 (44%), Gaps = 55/507 (10%)

Query: 99  ALSTHLTPFRVKHVLLKVQKDYVL--SLEFFTWVQTHKPSSLTL---------------E 141
           A   HL+ F V   L K QK  +L     F +  +  +P+S T                 
Sbjct: 2   AKRIHLSKFSVGSTLNKPQKSLLLPSCKPFCSLTEKQEPTSTTNNSTTNLQGQVQEQARH 61

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDS-FDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
            H   L  L +  + +++  ++R +L   S F  PS L+   L+S       PL  D+L 
Sbjct: 62  EHVQKLQTLLQQGRTETARRLIRSMLLPKSPFSSPSHLY--TLFSLSSTPMKPLFSDMLL 119

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE------- 253
              +  K    + + +  M+  G LP + S N FL SL+ ++R +  L  + E       
Sbjct: 120 SICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLR 179

Query: 254 ----------------------------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
                                       M+R  +SP V+  N+V+   CK   ++ A ++
Sbjct: 180 PDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKL 239

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P+  TYNTLI G+C  G L  A   +  M+   ++P +ITFN+L+ G C+
Sbjct: 240 FDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCR 299

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              + EA R+  EM+     P+  TY TL +G+ + GN +   +L EE +R G+++   T
Sbjct: 300 AQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYT 359

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            + L+  LCKEG  +KA  ++K   +N L P    ++ ++ G C   +  +A+   + M 
Sbjct: 360 CSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKME 419

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G RPN   +  L+  FC+ ++ + A + + +M+EK + P+    + L  G       +
Sbjct: 420 AVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFD 479

Query: 526 LAMKLFRKMEIRGLLPKGFDKLRTINC 552
              ++  +ME +GL P        INC
Sbjct: 480 RCFQILEEMEKKGLKPNVISYGCLINC 506



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 198/417 (47%), Gaps = 17/417 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILYSYRM 188
            +++V+  L K ++ K +E +   +LD              D +    +L ++     RM
Sbjct: 219 VYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERM 278

Query: 189 ----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
                + + + F+ L       +    A     +M  YGF+P   +        L    V
Sbjct: 279 KVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNV 338

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D ++   +E  R  +    YT +++++A CK G +E+A EV K     G  P    +NT+
Sbjct: 339 DASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTI 398

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           ++G+C  G ++ A      ME  G++PN +T+N+L+  FC+   + EA +   +M    V
Sbjct: 399 VNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGV 458

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PNV TYNTLI+GYG+    +    + EEM + G+K ++++Y  LI  LCK+    +A  
Sbjct: 459 LPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEV 518

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           ++ D+    +VPNA  Y+ LI G C+    + AF+ +  M+     P    + +L++  C
Sbjct: 519 ILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLC 578

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +      A  +  E+  K ++ D I  + L SG    G  + A++L+  M+  G+ P
Sbjct: 579 KKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKP 635



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 173/359 (48%), Gaps = 13/359 (3%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L            A +   +  + G  P+    N  ++       ++ A    ++M   
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PN  T N ++  FC++  +E A +  K M   G +P+V TYNTLI G+    L    
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            +    MEK G++PNVI++  LI   CK   + EA  I  +M    V PN   YN LI+G
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
               G  +     ++EM+   I   ++TYN LI GLCK+GK  +A  L  ++ +  L  +
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFD 601

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++LI+G     N ++A +LY++M +SG +P  + +  L++  C  E      ++  
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQ 660

Query: 498 EMLEKCMAPDSIILSELYSGLHHC----GKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           EML+  + PD +I    Y+ L HC    G  + A  L   ME +G+ P   DK+ T NC
Sbjct: 661 EMLQMNLVPDRVI----YNALIHCYVEHGDVQKACSLHSAMEAQGIQP---DKM-TYNC 711



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 189/451 (41%), Gaps = 57/451 (12%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL------- 194
           T SI+L+ L K    + +E +L+  L+ +        F++I+  Y  C    +       
Sbjct: 359 TCSILLNALCKEGNMEKAEEVLKKFLE-NGLAPVGVFFNTIVNGY--CQVGDINKAYTTI 415

Query: 195 -------------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
                         ++ L K +   K    A     +M + G LP +E+ N  +     S
Sbjct: 416 EKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRS 475

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
              D      +EM +  + PNV +   +++  CK   I  A  +  +M   G +P+   Y
Sbjct: 476 CLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIY 535

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N LI G C  G L  A +F + M    I P ++T+N LI G CKKGK+ EA  + SE+  
Sbjct: 536 NMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITR 595

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG---- 417
             +S +V+TYN+LI+GY   GN +    LYE M ++GIK  + TY+ LI G  KEG    
Sbjct: 596 KGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVLV 655

Query: 418 ------------------------------KTKKAAYLVKDLDKNSLVPNASTYSALITG 447
                                           +KA  L   ++   + P+  TY+ LI G
Sbjct: 656 EKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILG 715

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                   +   L   M   G  P    +++L+   C+ +DFD A     EM E    P 
Sbjct: 716 HFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPS 775

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             I   L +GL   G+   A  +  +M ++G
Sbjct: 776 VSICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 112/261 (42%), Gaps = 21/261 (8%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSD-SFDLPSKLFDSILYSYRMCDSSPLVFD 197
           TL T++I+++ L K  K   +E++   I     SFD+                   + ++
Sbjct: 566 TLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDV-------------------ITYN 606

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L   Y+     + A + +  M+  G  P + + ++ ++     E + +    Y+EM + 
Sbjct: 607 SLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGC-GKEGLVLVEKIYQEMLQM 665

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+    N ++H + + G +++A  +   ME+ G  P   TYN LI GH  +G +   
Sbjct: 666 NLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKV 725

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               N M+  G+ P   T++ LI G CK      A   + EM     +P+V   + LI G
Sbjct: 726 KNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITG 785

Query: 378 YGQVGNSEMGASLYEEMLRNG 398
             + G S     +  EM   G
Sbjct: 786 LREEGRSHDADVICSEMNMKG 806


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 169/347 (48%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   G  P + +    L  L   +RV  AL  + +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C KG   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ ++ +I   CK G+  +A  +F+EM+   + P++ TYN++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G       L +EML   I  D++TYNALI    KEGK  +A  L  ++    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS++I G C +   + A  ++  M   GC PN   F  L+  +C  +  D   E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G +  G    A+ L ++M   GL P
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TY+++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  PN+ITFNTLI G+C   ++ +   +  EM  T +  +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------- 426
           LI+G+  VG+      L +EM+ +G+  DI+T + L+ GLC  GK K A  +        
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 427 KDLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           KDLD     N + P+  TY+ LI+G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++   M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AITYITLICGFRKVGNINGA 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + +  +       R+D A   +  M     SPN+ T N ++  +C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G +   TTYNTLI G    G L+ A+     M  +G+ P+++T +TL+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEI 536
            +  + +GL    K+EL  A+ +  K+++
Sbjct: 653 TIRNMLTGLWS--KEELKRAVAMLEKLQM 679



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++  FC    +  A+  F  +  +G  P V T+ TL+ G C +  +S A+   + M +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  + G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  A E+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  S +  G     + + A  +F  M  +G  P
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 11/350 (3%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            +P +   +  + SL    R   A   + EM+   I P+++T N ++  FC  G    A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++ + M      P V TYN LI+    +G    A +  + M   GI PN IT++++I GF
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+ +L  A  +F  M     SPN++T+NTLI+GY      + G  L  EM   G+  D 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            TYN LI G    G    A  L++++  + L P+  T   L+ G C     + A +++K 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 464 MIRS-----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           M +S           G  P+   + +L+S       F  A E+  EM  + + PD+I  S
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            +  GL    + + A ++F  M  +   P        IN   + G  + G
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 176/355 (49%), Gaps = 8/355 (2%)

Query: 189 CDSSPL-VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C SSP      LF T + R     A+   C+    G     ES  K  S   + + ++ A
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGG-----ESL-KLQSGFHEIKGLEDA 63

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  + +M R+R  P+V     +M    ++   +  + +++ ME       + ++N LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C+   L  A+     + K G+ P+V+TF TL+ G C + ++ EA  +F +M  T   PN
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPN 183

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVT+ TL+NG  + G      +L + M+ +G++   +TY  ++ G+CK+G T  A  L++
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 428 DLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +++ S ++PN   YSA+I   C       A  L+  M   G  P+   +  ++  FC +
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  A ++L EMLE+ ++PD +  + L +     GK   A +L+ +M  RG++P
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 358



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 12/322 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + +   A   F  M   G  P + + N  +     ++R+D  +    E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +  T N ++H F  +G +  A+++ + M S G  P + T +TL+ G C+ G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 314 LSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           L  A++   +M+K           NG++P+V T+N LI G   +GK  EA  ++ EM   
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TY+++I+G  +    +    +++ M       +++T+  LI G CK G+    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++ +  +V NA TY  LI G     N   A  +++ MI SG  P+      +++ 
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 483 FCQNEDFDRAAEVLLEMLEKCM 504
               E+  RA   +LE L+  M
Sbjct: 661 LWSKEELKRAV-AMLEKLQMSM 681


>gi|15226656|ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g15980
 gi|5306237|gb|AAD41970.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251359|gb|AEC06453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 498

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 220/448 (49%), Gaps = 29/448 (6%)

Query: 80  DFVNIAYSHLIHSDWKKLTALS-THLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           D V+I   H   S W  L +L  +  TP +   + L ++ +  LSL FF + + +   S 
Sbjct: 44  DAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSH 103

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGIL-----DSDSFDLPSKLFDSILYSYRMCDSSP 193
              + S ++HIL+++R    +  I+R  L     D D  D   K+F S++ SY  C S+P
Sbjct: 104 DTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDE-DRVLKVFRSLIKSYNRCGSAP 162

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--Y 251
            VFDLL K+    K+   A     ++R  G    I +CN  ++ +  S R   + G+  Y
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEV--SRRRGASNGYKMY 220

Query: 252 KEM-------------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-MGFIPS 297
           +E+                +I PN  T N +M +F + G  E    +++ ME  +G  P+
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V +YN L+  +C +GL+S A K    M+  G+  +++ +NT+I G C   ++ +A  +F 
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +M    +    +TY  L+NGY + G+ + G  +Y EM R G + D LT  AL+ GLC + 
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400

Query: 418 KTKK---AAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
             ++   AA +VKD  + ++  P+ + Y  L+   C     +RA  +   M+  G +P++
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQ 460

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             +   +  +    D + +A + +EM E
Sbjct: 461 ETYRAFIDGYGIVGDEETSALLAIEMAE 488



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/242 (18%), Positives = 106/242 (43%), Gaps = 19/242 (7%)

Query: 320 FKNLME---KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           F++L++   + G  P V  F+ LI       ++  A  +  ++++  ++  + T N LI 
Sbjct: 148 FRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALIT 205

Query: 377 GYGQVGNSEMGASLYEEM-------------LRNGIKVDILTYNALILGLCKEGKTKKAA 423
              +   +  G  +Y E+             +   IK +  T+N++++   +EG+T+   
Sbjct: 206 EVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVE 265

Query: 424 YLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            + +++++     PN  +Y+ L+   C R     A ++++ M   G   +   +  ++  
Sbjct: 266 RIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGG 325

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C N +  +A E+  +M  K +    +    L +G    G  +  + ++R+M+ +G    
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385

Query: 543 GF 544
           G 
Sbjct: 386 GL 387


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 175/324 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM  +G  P I + N  ++S    +R+  A     ++ +    PN+ T N ++   C  G
Sbjct: 84  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I   + +F  M   GF P+V TY TLI+G C  G  S A++    ME+   QP+V+ + 
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 203

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           ++I   CK  ++ +A  +FSEM    +SP++ TYN+LI+    +   +   +L  EM+ +
Sbjct: 204 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  +++ ++ ++  LCKEGK  +A  +V  + K  + PN  TY+AL+ G C+R   + A
Sbjct: 264 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 323

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++ +M+  G  P+   +  L++ +C+ +  ++A  +  EM  K + P+++  S L  G
Sbjct: 324 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 383

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L H G+ + A+ LF +M  RG +P
Sbjct: 384 LCHVGRLQDAIALFHEMVTRGQIP 407



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 168/362 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L +      K       F +M   GF P + +    ++ L        A+   + M 
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+V     ++ + CK   + +A  +F  M   G  PS+ TYN+LI   CN     
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
                 N M  + I PNV+ F+T++   CK+GK+ EA+ +   M    V PNVVTYN L+
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+      +    +++ M+  G   D+++Y+ LI G CK  + +KA YL +++ +  L+
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TYS L+ G C     + A  L+  M+  G  P+   + +L+   C+N   D A  +
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 431

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           L  +    M PD  I + +  G+   G+ E A  LF  +  +GL P  +     IN   +
Sbjct: 432 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 491

Query: 556 NG 557
            G
Sbjct: 492 QG 493



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 170/342 (49%), Gaps = 7/342 (2%)

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           T A  +  R+     CQ       P +      + SL    +V  A   + EM    ISP
Sbjct: 180 TSAAIRLLRSMEQGNCQ-------PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 232

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +++T N ++HA C L   +    +   M +   +P+V  ++T++   C +G +  A    
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           ++M K G++PNV+T+N L+ G C + ++ EA ++F  M     +P+VV+Y+TLINGY ++
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              E    L+EEM R  +  + +TY+ L+ GLC  G+ + A  L  ++     +P+  +Y
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             L+   C  +  + A  L K++  S   P+  I+ +++   C+  + + A ++   +  
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 472

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           K + P+    + + +GL   G    A KLF +M+ +G  P G
Sbjct: 473 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 514



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 172/350 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +V+  +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 195 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 254

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I PNV   + V+ A CK G +  A +V   M   G  P+V TYN L+ GH
Sbjct: 255 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 314

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  + M   G  P+V++++TLI G+CK  ++ +A  +F EM    + PN 
Sbjct: 315 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 374

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY+TL++G   VG  +   +L+ EM+  G   D ++Y  L+  LCK  +  +A  L+K 
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ +++ P+   Y+ +I G C     E A  L+ ++   G  PN   + ++++  CQ   
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              A+++  EM  K  +P+    + +  G     +    ++L ++M  RG
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 5/330 (1%)

Query: 192 SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP +F  + L     +  ++++ T    +M +   +P +   +  + +L    +V  A  
Sbjct: 231 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 290

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M +  + PNV T N +M   C    ++ AV+VF  M   GF P V +Y+TLI+G+C
Sbjct: 291 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 350

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  AM     M +  + PN +T++TL+ G C  G+L +A  +F EM      P+ V
Sbjct: 351 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 410

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +Y  L++   +    +   +L + +  + +  DI  Y  +I G+C+ G+ + A  L  +L
Sbjct: 411 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 470

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L PN  TY+ +I G C +     A +L+  M R G  PN   + ++   F +N + 
Sbjct: 471 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 530

Query: 490 DRAAEVLLEMLEKCMAPD---SIILSELYS 516
            R  ++L EML +  + D   S +L E+ S
Sbjct: 531 LRGIQLLQEMLARGFSADVSTSTVLVEMLS 560



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 124/259 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + ++ L   +  R +   A   F  M   GF P + S +  ++     +R++ 
Sbjct: 298 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 357

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EM R  + PN  T + +MH  C +G ++ A+ +F  M + G IP   +Y  L+ 
Sbjct: 358 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 417

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C    L  A+     +E + + P++  +  +I G C+ G+L  A  +FS + +  + P
Sbjct: 418 YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHP 477

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +ING  Q G     + L+ EM R G   +  TYN +  G  +  +T +   L+
Sbjct: 478 NVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 537

Query: 427 KDLDKNSLVPNASTYSALI 445
           +++       + ST + L+
Sbjct: 538 QEMLARGFSADVSTSTVLV 556



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L     H  + ++A   F +M   G +P   S    L  L  + R+D A+   K 
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + + P++    +V+   C+ G +E A ++F N+ S G  P+V TY  +I+G C +GL
Sbjct: 435 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 494

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K    M++ G  PN  T+N +  GF +  +     ++  EM A   S +V T   
Sbjct: 495 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 554

Query: 374 LINGYGQVGNSEMGASLYEEMLR 396
           L+      G  +    +  E L+
Sbjct: 555 LVEMLSDDGLDQSVKQILSEFLQ 577


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP +   ++F S++  +++ ++ L F K++  N I+ N+YTLN++++ FC+      A  
Sbjct: 85  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +  +G+ P  TT+NTLI G   +G +S A+   + M +NG QP+V+T+N+++ G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G    A  +  +M+  NV  +V TY+T+I+   + G  +   SL++EM   GIK  ++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN+L+ GLCK GK    A L+KD+    +VPN  T++ L+         + A +LYK M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I  G  PN   +  LM  +C       A  +L  M+    +PD +  + L  G     + 
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 525 ELAMKLFRKMEIRGLLP 541
           +  MK+FR +  RGL+ 
Sbjct: 385 DDGMKVFRNISKRGLVA 401



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 163/313 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  +  L    +V  A+     M  N   P+V T N +++  C+ G    A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++ + ME       V TY+T+I   C  G +  A+     ME  GI+ +V+T+N+L+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK GK ++   +  +M +  + PNV+T+N L++ + + G  +    LY+EM+  GI  +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ G C + +  +A  ++  + +N   P+  T+++LI G C+ K  +   ++++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           ++ + G   N   + +L+  FCQ+     A E+  EM+   + PD +    L  GL   G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 523 KDELAMKLFRKME 535
           K E A+++F  ++
Sbjct: 453 KLEKALEIFEDLQ 465



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G    + + N  +  L  + + +      K+M    I PNV T N+++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F K G ++ A E++K M + G  P++ TYNTL+ G+C +  LS A    +LM +N   P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++TF +LI G+C   ++ +  ++F  +    +  N VTY+ L+ G+ Q G  ++   L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM+ +G+  D++TY  L+ GLC  GK +KA  + +DL K+ +      Y+ +I G C  
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E A+ L+ S+   G +PN   + +++S  C+      A  +L +M E   AP+    
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRG 538
           + L       G    + KL  +M+  G
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCG 573



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 178/381 (46%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L K      K   A     +M + G  P + + N  ++ +  S    +AL   ++M 
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              +  +V+T + ++ + C+ G I+ A+ +FK ME+ G   SV TYN+L+ G C  G   
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280

Query: 313 -----------------------LLSLAMKFKNLMEKN---------GIQPNVITFNTLI 340
                                  LL + +K   L E N         GI PN+IT+NTL+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C + +L EAN +   M     SP++VT+ +LI GY  V   + G  ++  + + G+ 
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TY+ L+ G C+ GK K A  L +++  + ++P+  TY  L+ G C     E+A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ + +S       ++  ++   C+    + A  +   +  K + P+ +  + + SGL  
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G    A  L RKME  G  P
Sbjct: 521 KGSLSEANILLRKMEEDGNAP 541



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F  L K Y   K+  +    F  +   G +    + +  +     S ++ +A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++EM  + + P+V T  +++   C  G +E+A+E+F++++       +  Y T+I G 
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A      +   G++PNV+T+  +I G CKKG L EAN +  +M+    +PN 
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            TYNTLI  + + G+    A L EEM   G   D
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD 577



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 92/192 (47%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  +A  +F EM  +   P++V ++   +   +     +     +++  NGI  +I T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I   C+  KT  A  ++  + K    P+ +T++ LI G  +      A  L   M+ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC+P+   +  +++  C++ D   A ++L +M E+ +  D    S +   L   G  + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 528 MKLFRKMEIRGL 539
           + LF++ME +G+
Sbjct: 248 ISLFKEMETKGI 259


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP +   ++F S++  +++ ++ L F K++  N I+ N+YTLN++++ FC+      A  
Sbjct: 75  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 134

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +  +G+ P  TT+NTLI G   +G +S A+   + M +NG QP+V+T+N+++ G C
Sbjct: 135 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 194

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G    A  +  +M+  NV  +V TY+T+I+   + G  +   SL++EM   GIK  ++
Sbjct: 195 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 254

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN+L+ GLCK GK    A L+KD+    +VPN  T++ L+         + A +LYK M
Sbjct: 255 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 314

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I  G  PN   +  LM  +C       A  +L  M+    +PD +  + L  G     + 
Sbjct: 315 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 374

Query: 525 ELAMKLFRKMEIRGLLP 541
           +  MK+FR +  RGL+ 
Sbjct: 375 DDGMKVFRNISKRGLVA 391



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 163/313 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  +  L    +V  A+     M  N   P+V T N +++  C+ G    A
Sbjct: 143 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 202

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++ + ME       V TY+T+I   C  G +  A+     ME  GI+ +V+T+N+L+ G
Sbjct: 203 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 262

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK GK ++   +  +M +  + PNV+T+N L++ + + G  +    LY+EM+  GI  +
Sbjct: 263 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 322

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ G C + +  +A  ++  + +N   P+  T+++LI G C+ K  +   ++++
Sbjct: 323 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 382

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           ++ + G   N   + +L+  FCQ+     A E+  EM+   + PD +    L  GL   G
Sbjct: 383 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 442

Query: 523 KDELAMKLFRKME 535
           K E A+++F  ++
Sbjct: 443 KLEKALEIFEDLQ 455



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 166/327 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G    + + N  +  L  + + +      K+M    I PNV T N+++ 
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F K G ++ A E++K M + G  P++ TYNTL+ G+C +  LS A    +LM +N   P
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++TF +LI G+C   ++ +  ++F  +    +  N VTY+ L+ G+ Q G  ++   L+
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM+ +G+  D++TY  L+ GLC  GK +KA  + +DL K+ +      Y+ +I G C  
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E A+ L+ S+   G +PN   + +++S  C+      A  +L +M E   AP+    
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRG 538
           + L       G    + KL  +M+  G
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKSCG 563



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 178/381 (46%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L K      K   A     +M + G  P + + N  ++ +  S    +AL   ++M 
Sbjct: 151 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              +  +V+T + ++ + C+ G I+ A+ +FK ME+ G   SV TYN+L+ G C  G   
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270

Query: 313 -----------------------LLSLAMKFKNLMEKN---------GIQPNVITFNTLI 340
                                  LL + +K   L E N         GI PN+IT+NTL+
Sbjct: 271 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C + +L EAN +   M     SP++VT+ +LI GY  V   + G  ++  + + G+ 
Sbjct: 331 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 390

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TY+ L+ G C+ GK K A  L +++  + ++P+  TY  L+ G C     E+A ++
Sbjct: 391 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 450

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ + +S       ++  ++   C+    + A  +   +  K + P+ +  + + SGL  
Sbjct: 451 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 510

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G    A  L RKME  G  P
Sbjct: 511 KGSLSEANILLRKMEEDGNAP 531



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 131/286 (45%), Gaps = 17/286 (5%)

Query: 142 THSIVLHILTKNRKFKSS-----ESILRGILDS--------DSFDLPSKLFDS----ILY 184
           T +++L +  K  K + +     E I RGI  +        D + + ++L ++     L 
Sbjct: 290 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 349

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
               C    + F  L K Y   K+  +    F  +   G +    + +  +     S ++
Sbjct: 350 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 409

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +A   ++EM  + + P+V T  +++   C  G +E+A+E+F++++       +  Y T+
Sbjct: 410 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G C  G +  A      +   G++PNV+T+  +I G CKKG L EAN +  +M+    
Sbjct: 470 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +PN  TYNTLI  + + G+    A L EEM   G   D  +   +I
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 575



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 92/192 (47%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  +A  +F EM  +   P++V ++   +   +     +     +++  NGI  +I T N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I   C+  KT  A  ++  + K    P+ +T++ LI G  +      A  L   M+ +
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC+P+   +  +++  C++ D   A ++L +M E+ +  D    S +   L   G  + A
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237

Query: 528 MKLFRKMEIRGL 539
           + LF++ME +G+
Sbjct: 238 ISLFKEMETKGI 249



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 26/36 (72%)

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           M + GI PN IT+++LI GFCK+ +L EAN++   M
Sbjct: 725 MIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLM 760


>gi|357144033|ref|XP_003573143.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g38730-like [Brachypodium distachyon]
          Length = 599

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 182/346 (52%), Gaps = 4/346 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL  +++H  +  +A   F QMR  G  P   +C   L++L  +     A   + EM R 
Sbjct: 116 LLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKVFNEMGRA 175

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            ++ N +  N ++H   K     RA  +   M++ G      ++NT+I+ +  KG+   A
Sbjct: 176 GVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVRKGMQYEA 235

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M  +  M+  G++P+++T+NT+I G CK+G++ EA ++ ++M A  V P+ VTY TL++G
Sbjct: 236 MCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVDG 295

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y ++G+      L EEM   G+   + TYNA+I  LC++GK K+   L+ ++D   +  +
Sbjct: 296 YCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQAD 355

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             T + LI     R +   A ++ K M+ SG + ++  ++ L+  FC+ ++ D A E L 
Sbjct: 356 HVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEALF 415

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI--RGLLP 541
           EM+ +  +P+  + S L  G   C K+     L    E+  RGL P
Sbjct: 416 EMMGRGFSPNYSVFSWLVDGF--CKKNNTDAVLLIPDELIKRGLPP 459



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 146/288 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + M+   + P++ T N V+H  CK G ++ A ++  +M +    P   TY TL+ 
Sbjct: 235 AMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVTYTTLVD 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G +  A+K +  ME  G+ P V T+N +I   C+ GK+ E N + SEM    V  
Sbjct: 295 GYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMDGRKVQA 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y + G+      + + M+ +G+++D  TY ALI G CK  +  +A   +
Sbjct: 355 DHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELDEAKEAL 414

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN S +S L+ G C + N++    +   +I+ G  P+K ++  L+   C+ 
Sbjct: 415 FEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRGLPPDKSVYRSLIRRLCKK 474

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              D A +VL +M  K +  D ++ + L       GK   A  +  +M
Sbjct: 475 GLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAASDILNEM 522



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 177/416 (42%), Gaps = 26/416 (6%)

Query: 136 SSLTLETH--SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           + + + TH  + +LH+  K R    +E ++  +   D+  +P   F              
Sbjct: 175 AGVAMNTHVYNAMLHVCLKARDALRAEGLMTRM---DAAGVPLDRFS------------- 218

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             F+ +   Y  +     A     +M+D G  P I + N  +  L    R+  A     +
Sbjct: 219 --FNTVIALYVRKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTD 276

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+  T   ++  +C++G +  AV++ + ME+ G +P V TYN +I   C  G 
Sbjct: 277 MIAAAVEPDTVTYTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGK 336

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +       + M+   +Q + +T NTLI  + K+G +  A ++   M  + +  +  TY  
Sbjct: 337 MKEVNGLLSEMDGRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKA 396

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ +    +       EM+  G   +   ++ L+ G CK+  T     +  +L K  
Sbjct: 397 LIHGFCKAKELDEAKEALFEMMGRGFSPNYSVFSWLVDGFCKKNNTDAVLLIPDELIKRG 456

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+ S Y +LI   C +   + A ++   M   G   +  ++  L            A+
Sbjct: 457 LPPDKSVYRSLIRRLCKKGLVDLAQKVLHQMQGKGLEVDCLVYATLAYAHLTAGKVAAAS 516

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA-MKLFRKMEI-RGLLPKGFDKL 547
           ++L EM  K M+    +  ++Y+ L     DE A + +F    I RGL+ K   KL
Sbjct: 517 DILNEMARKQMS----VTPQIYNCLCTSYGDEKATLNMFWVHTIERGLIAKSVYKL 568



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/304 (22%), Positives = 119/304 (39%), Gaps = 44/304 (14%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P V ++  L   H +      A +  + M   G+ P+      L+    +      A+++
Sbjct: 109 PHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHKV 168

Query: 356 FSEMKATNVSPNVVTY-----------------------------------NTLINGYGQ 380
           F+EM    V+ N   Y                                   NT+I  Y +
Sbjct: 169 FNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYVR 228

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G       + E M   G++ DI+T+N +I GLCKEG+ K+AA L  D+   ++ P+  T
Sbjct: 229 KGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTVT 288

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G C   +   A +L + M   G  P    +  ++   C++        +L EM 
Sbjct: 289 YTTLVDGYCRIGDVGEAVKLREEMEAGGMVPGVATYNAIIRKLCEDGKMKEVNGLLSEMD 348

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTIN 551
            + +  D +  + L +     G    A K+ ++M   GL         L  GF K + ++
Sbjct: 349 GRKVQADHVTCNTLINSYAKRGDMTSACKVKKRMMESGLQLDQFTYKALIHGFCKAKELD 408

Query: 552 CAPE 555
            A E
Sbjct: 409 EAKE 412



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/212 (20%), Positives = 94/212 (44%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+V ++  L        + H+A R+F +M+A  ++P+      L+    +   +     
Sbjct: 108 EPHVPSWLLLALSHSHSARPHDAARVFDQMRARGLAPDAHACTALLTALARARMTATAHK 167

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           ++ EM R G+ ++   YNA++    K     +A  L+  +D   +  +  +++ +I    
Sbjct: 168 VFNEMGRAGVAMNTHVYNAMLHVCLKARDALRAEGLMTRMDAAGVPLDRFSFNTVIALYV 227

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +     A  + + M   G  P+   +  ++   C+      AA++  +M+   + PD++
Sbjct: 228 RKGMQYEAMCVRERMQDEGVEPDIVTWNTVIHGLCKEGRMKEAAQLRTDMIAAAVEPDTV 287

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + L  G    G    A+KL  +ME  G++P
Sbjct: 288 TYTTLVDGYCRIGDVGEAVKLREEMEAGGMVP 319


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 2/347 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P +   +  + SL   + +  A+ F  EM    ISPNV T + ++H FC LG
Sbjct: 107 KMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLG 166

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL-LSLAMKFKNLMEKNGIQPNVITF 336
               A  +FK M     +P   T+N L+ G   +G+ L     F+ ++EK G++PNV T+
Sbjct: 167 RSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK-GVEPNVNTY 225

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N L+ G+C + ++ EA ++F+ M     +P+V +YN LI G+ + G  +    L  EM  
Sbjct: 226 NALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSH 285

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             +  D +TY+ L+ G C++G+ + A  L++++    L+P+  TYS ++ G C + + + 
Sbjct: 286 KALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDE 345

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           AF+L K+M  S   PN  I+ +L+   C     + A E+   +  K + PD +  + + S
Sbjct: 346 AFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMIS 405

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           GL   G    A +LFR M + G LP        I     NG+  + G
Sbjct: 406 GLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 163/295 (55%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A      M +  + PN  T + +++       I  AV++F  M  MG+ P V TY+T+I+
Sbjct: 31  AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIIN 90

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G  ++A++    ME+ G +PNV+ ++T+I   CK   + EA    SEM    +SP
Sbjct: 91  GLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISP 150

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTY+++++G+  +G S    SL+++M+   +  D +T+N L+ GL KEG   +A  + 
Sbjct: 151 NVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVF 210

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + +  + PN +TY+AL+ G C +   + A +L+  M+R GC P+   + +L+   C++
Sbjct: 211 ETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKS 270

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              D A  +L EM  K + PD++  S L  G    G+ + A KL  +M   GLLP
Sbjct: 271 GRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 175/349 (50%), Gaps = 2/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L    + + K  +A   F +M   G+ P + + +  ++ L       +A+   K+
Sbjct: 48  VTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKK 107

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PNV   + ++ + CK  +I  A+E    M + G  P+V TY++++ G CN G 
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            + A   FK ++E+N + P+ +TFN L+ G  K+G + EA  +F  M    V PNV TYN
Sbjct: 168 SNEATSLFKQMVERN-VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYN 226

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++GY      +    L+  M+R G    + +YN LI G CK G+  +A  L+ ++   
Sbjct: 227 ALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK 286

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           +L P+  TYS L+ G C     + A +L + M   G  P+   + +++   C+    D A
Sbjct: 287 ALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEA 346

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+L  M E  + P+  I + L  G+ + GK E A +LF  + ++G+ P
Sbjct: 347 FELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQP 395



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 176/351 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +V+  +  +    K    A +   +M + G  P + + +  L    +  R + A 
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K+M    + P+  T N+++    K G+I  A  VF+ M   G  P+V TYN L+ G+
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C++  +  A K  N+M + G  P+V ++N LI G CK G++ EA  + +EM    ++P+ 
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY+TL+ G+ Q G  +    L EEM   G+  D++TY+ ++ GLCK+G   +A  L+K 
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + ++ + PN   Y+ LI G C     E A +L+ ++   G +P+   + +++S   +   
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            + A E+  +M      P+S   + +  G    G    A +L  +M  RG 
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGF 463



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 156/315 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   + +  +   AT  F QM +   +P   + N  +  L     +  A   ++ 
Sbjct: 153 VTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFET 212

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PNV T N +M  +C    ++ A ++F  M   G  PSV +YN LI GHC  G 
Sbjct: 213 MIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGR 272

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M    + P+ +T++TL+ GFC+ G+  +A ++  EM++  + P+++TY+ 
Sbjct: 273 IDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSI 332

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +++G  + G+ +    L + M  + I+ +I  Y  LI G+C  GK + A  L  +L    
Sbjct: 333 VLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKG 392

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ +I+G      S  A +L++ M   GC PN   + +++  F +N D   A 
Sbjct: 393 IQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAG 452

Query: 494 EVLLEMLEKCMAPDS 508
            ++ EM+ +  + DS
Sbjct: 453 RLIEEMVGRGFSADS 467



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 149/319 (46%), Gaps = 2/319 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SIL G  +    +  + LF  ++    M D+  + F++L    +       A   F  M 
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDT--VTFNILVDGLSKEGMILEAQCVFETMI 214

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + N  +       ++D A   +  M R   +P+V + N+++   CK G I+
Sbjct: 215 EKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRID 274

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M      P   TY+TL+ G C  G    A K    M   G+ P+++T++ ++
Sbjct: 275 EAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVL 334

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK+G L EA  +   M+ + + PN+  Y  LI G    G  E    L+  +   GI+
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQ 394

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TY  +I GL K G + +A  L +D+  +  +PN+ TY+ +I G     ++  A +L
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRL 454

Query: 461 YKSMIRSGCRPNKHIFEML 479
            + M+  G   +   F+ML
Sbjct: 455 IEEMVGRGFSADSSTFQML 473


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 175/324 (54%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM  +G  P I + N  ++S    +R+  A     ++ +    PN+ T N ++   C  G
Sbjct: 93  QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I   + +F  M   GF P+V TY TLI+G C  G  S A++    ME+   QP+V+ + 
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYT 212

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           ++I   CK  ++ +A  +FSEM    +SP++ TYN+LI+    +   +   +L  EM+ +
Sbjct: 213 SIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I  +++ ++ ++  LCKEGK  +A  +V  + K  + PN  TY+AL+ G C+R   + A
Sbjct: 273 KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEA 332

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++ +M+  G  P+   +  L++ +C+ +  ++A  +  EM  K + P+++  S L  G
Sbjct: 333 VKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHG 392

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L H G+ + A+ LF +M  RG +P
Sbjct: 393 LCHVGRLQDAIALFHEMVTRGQIP 416



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 168/362 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L +      K       F +M   GF P + +    ++ L        A+   + M 
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+V     ++ + CK   + +A  +F  M   G  PS+ TYN+LI   CN     
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
                 N M  + I PNV+ F+T++   CK+GK+ EA+ +   M    V PNVVTYN L+
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+      +    +++ M+  G   D+++Y+ LI G CK  + +KA YL +++ +  L+
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TYS L+ G C     + A  L+  M+  G  P+   + +L+   C+N   D A  +
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIAL 440

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           L  +    M PD  I + +  G+   G+ E A  LF  +  +GL P  +     IN   +
Sbjct: 441 LKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQ 500

Query: 556 NG 557
            G
Sbjct: 501 QG 502



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 170/342 (49%), Gaps = 7/342 (2%)

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           T A  +  R+     CQ       P +      + SL    +V  A   + EM    ISP
Sbjct: 189 TSAAIRLLRSMEQGNCQ-------PDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISP 241

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +++T N ++HA C L   +    +   M +   +P+V  ++T++   C +G +  A    
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           ++M K G++PNV+T+N L+ G C + ++ EA ++F  M     +P+VV+Y+TLINGY ++
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              E    L+EEM R  +  + +TY+ L+ GLC  G+ + A  L  ++     +P+  +Y
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             L+   C  +  + A  L K++  S   P+  I+ +++   C+  + + A ++   +  
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSS 481

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           K + P+    + + +GL   G    A KLF +M+ +G  P G
Sbjct: 482 KGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNG 523



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 172/350 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +V+  +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 204 CQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVT 263

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I PNV   + V+ A CK G +  A +V   M   G  P+V TYN L+ GH
Sbjct: 264 ALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGH 323

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  + M   G  P+V++++TLI G+CK  ++ +A  +F EM    + PN 
Sbjct: 324 CLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNT 383

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY+TL++G   VG  +   +L+ EM+  G   D ++Y  L+  LCK  +  +A  L+K 
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ +++ P+   Y+ +I G C     E A  L+ ++   G  PN   + ++++  CQ   
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              A+++  EM  K  +P+    + +  G     +    ++L ++M  RG
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 159/330 (48%), Gaps = 5/330 (1%)

Query: 192 SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP +F  + L     +  ++++ T    +M +   +P +   +  + +L    +V  A  
Sbjct: 240 SPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 299

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M +  + PNV T N +M   C    ++ AV+VF  M   GF P V +Y+TLI+G+C
Sbjct: 300 VVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYC 359

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  AM     M +  + PN +T++TL+ G C  G+L +A  +F EM      P+ V
Sbjct: 360 KIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFV 419

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +Y  L++   +    +   +L + +  + +  DI  Y  +I G+C+ G+ + A  L  +L
Sbjct: 420 SYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 479

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L PN  TY+ +I G C +     A +L+  M R G  PN   + ++   F +N + 
Sbjct: 480 SSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNET 539

Query: 490 DRAAEVLLEMLEKCMAPD---SIILSELYS 516
            R  ++L EML +  + D   S +L E+ S
Sbjct: 540 LRGIQLLQEMLARGFSADVSTSTVLVEMLS 569



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 124/259 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + ++ L   +  R +   A   F  M   GF P + S +  ++     +R++ 
Sbjct: 307 RGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEK 366

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EM R  + PN  T + +MH  C +G ++ A+ +F  M + G IP   +Y  L+ 
Sbjct: 367 AMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLD 426

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C    L  A+     +E + + P++  +  +I G C+ G+L  A  +FS + +  + P
Sbjct: 427 YLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHP 486

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +ING  Q G     + L+ EM R G   +  TYN +  G  +  +T +   L+
Sbjct: 487 NVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLL 546

Query: 427 KDLDKNSLVPNASTYSALI 445
           +++       + ST + L+
Sbjct: 547 QEMLARGFSADVSTSTVLV 565



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L     H  + ++A   F +M   G +P   S    L  L  + R+D A+   K 
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + + P++    +V+   C+ G +E A ++F N+ S G  P+V TY  +I+G C +GL
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGL 503

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K    M++ G  PN  T+N +  GF +  +     ++  EM A   S +V T   
Sbjct: 504 LAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTV 563

Query: 374 LINGYGQVGNSEMGASLYEEMLR 396
           L+      G  +    +  E L+
Sbjct: 564 LVEMLSDDGLDQSVKQILSEFLQ 586


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP +   ++F S++  +++ ++ L F K++  N I+ N+YTLN++++ FC+      A  
Sbjct: 85  LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +  +G+ P  TT+NTLI G   +G +S A+   + M +NG QP+V+T+N+++ G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G    A  +  +M+  NV  +V TY+T+I+   + G  +   SL++EM   GIK  ++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN+L+ GLCK GK    A L+KD+    +VPN  T++ L+         + A +LYK M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I  G  PN   +  LM  +C       A  +L  M+    +PD +  + L  G     + 
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384

Query: 525 ELAMKLFRKMEIRGLLP 541
           +  MK+FR +  RGL+ 
Sbjct: 385 DDGMKVFRNISKRGLVA 401



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 176/351 (50%), Gaps = 18/351 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G    + + N  +  L  + + +      K+M    I PNV T N+++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F K G ++ A E++K M + G  P++ TYNTL+ G+C +  LS A    +LM +N   P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++TF +LI G+C   ++ +  ++F  +    +  N VTY+ L+ G+ Q G  ++   L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM+ +G+  D++TY  L+ GLC  GK +KA  + +DL K+ +      Y+ +I G C  
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP----- 506
              E A+ L+ S+   G +PN   + +++S  C+      A  +L +M E   AP     
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546

Query: 507 DSIILSELYSG-----------LHHCG--KDELAMKLFRKMEIRGLLPKGF 544
           +++I + L  G           +  CG   D  ++K+   M + G L K F
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 163/313 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  +  L    +V  A+     M  N   P+V T N +++  C+ G    A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++ + ME       V TY+T+I   C  G +  A+     ME  GI+ +V+T+N+L+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK GK ++   +  +M +  + PNV+T+N L++ + + G  +    LY+EM+  GI  +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ G C + +  +A  ++  + +N   P+  T+++LI G C+ K  +   ++++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           ++ + G   N   + +L+  FCQ+     A E+  EM+   + PD +    L  GL   G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452

Query: 523 KDELAMKLFRKME 535
           K E A+++F  ++
Sbjct: 453 KLEKALEIFEDLQ 465



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 178/381 (46%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L K      K   A     +M + G  P + + N  ++ +  S    +AL   ++M 
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
              +  +V+T + ++ + C+ G I+ A+ +FK ME+ G   SV TYN+L+ G C  G   
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280

Query: 313 -----------------------LLSLAMKFKNLMEKN---------GIQPNVITFNTLI 340
                                  LL + +K   L E N         GI PN+IT+NTL+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C + +L EAN +   M     SP++VT+ +LI GY  V   + G  ++  + + G+ 
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TY+ L+ G C+ GK K A  L +++  + ++P+  TY  L+ G C     E+A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ + +S       ++  ++   C+    + A  +   +  K + P+ +  + + SGL  
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G    A  L RKME  G  P
Sbjct: 521 KGSLSEANILLRKMEEDGNAP 541



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 170/346 (49%), Gaps = 13/346 (3%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +ET  I   ++T N       S++RG+  +  ++  + L   ++   R    + + F++L
Sbjct: 254 METKGIKSSVVTYN-------SLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              +    K + A + + +M   G  P I + N  +       R+  A      M RN+ 
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP++ T   ++  +C +  ++  ++VF+N+   G + +  TY+ L+ G C  G + LA +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M  +G+ P+V+T+  L+ G C  GKL +A  IF +++ + +   +V Y T+I G  
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  E   +L+  +   G+K +++TY  +I GLCK+G   +A  L++ ++++   PN  
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPN----KHIFEMLMS 481
           TY+ LI       +   + +L + M   G   +    K + +ML+S
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 92/192 (47%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  +A  +F EM  +   P++V ++   +   +     +     +++  NGI  +I T N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I   C+  KT  A  ++  + K    P+ +T++ LI G  +      A  L   M+ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC+P+   +  +++  C++ D   A ++L +M E+ +  D    S +   L   G  + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 528 MKLFRKMEIRGL 539
           + LF++ME +G+
Sbjct: 248 ISLFKEMETKGI 259


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 203/430 (47%), Gaps = 27/430 (6%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           L  +  + ++L+ F W          +E H  + +  T N+       I++G+   D  +
Sbjct: 382 LCTEGRFGIALKIFDW----------MEGHGTLANAQTYNQ-------IIKGLFGMDDIE 424

Query: 174 LPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
               +F+ +L        SP V  ++ L      R    NAT     M++    P   + 
Sbjct: 425 KAMVVFNKMLKD----GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTY 480

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            + +S      ++D A  F+ EM +  ISPN +T   ++  +CK G I+ A+ +F+ ME 
Sbjct: 481 CELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEE 540

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G   S+ TYN +ISG       S A KF   M + G+QPN IT+ +LI G CK    + 
Sbjct: 541 NGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNL 600

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A +IF EM+  N  PN  TY +LI G  Q G  +      E +  NG +  I TY+ L+ 
Sbjct: 601 AFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVS 656

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC+EG++ +A+ LV+++ +  L P+   Y +L+   C     + A +++  M   G +P
Sbjct: 657 GLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQP 716

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +  I+++L+   C     + A  +   +L+K    D I+ + L  GL   G  +L MK  
Sbjct: 717 HLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFL 776

Query: 532 RKMEIRGLLP 541
             ME R   P
Sbjct: 777 YLMESRNCTP 786



 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 168/353 (47%), Gaps = 4/353 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  S   +  +        K   A   + +M   G +P   + N  ++ L    R  IAL
Sbjct: 333 CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIAL 392

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M  +    N  T N ++     +  IE+A+ VF  M   G  P+V TYNTLI  +
Sbjct: 393 KIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVEN 452

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G L+ A +F  +M+++  +P+  T+  LI GFCK GKL  A   F EM    +SPN 
Sbjct: 453 LKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQ 512

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY  +I+GY + G  ++  SL+E M  NG    I TYNA+I GL K  +  +A      
Sbjct: 513 WTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAK 572

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  L PN  TY++LI G C    +  AF+++  M +  C PN H +  L+   CQ   
Sbjct: 573 MTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGK 632

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D AAE L E    C  P     S L SGL   G+   A +L   M+ +GL P
Sbjct: 633 VD-AAERLTE--NGC-EPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSP 681



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 198/445 (44%), Gaps = 56/445 (12%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS LT  T   +++IL K  K K  E++L              +F+ I + + +C  + 
Sbjct: 194 KPSLLTFNT---MINILCK--KGKVQEAVL--------------VFNKI-FQFDLCPDA- 232

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             +  L   +   +K   A + F +M   G  P   + +  ++ L +  R+  A+   +E
Sbjct: 233 FTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEE 292

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P VYT  + + + C +G ++ A+ + ++M   G  PSV TY  +ISG    G 
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           + LA+   + M K G+ PN +T+N LI   C +G+   A +IF  M+      N  TYN 
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL---------------------- 411
           +I G   + + E    ++ +ML++G    ++TYN LI+                      
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472

Query: 412 -------------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                        G CK GK   A     ++ K  + PN  TY+A+I G C     + A 
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L++ M  +GC  +   +  ++S   +   F  A +   +M E+ + P++I  + L +GL
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKG 543
                  LA K+F +ME +  LP  
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNA 617



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 216/509 (42%), Gaps = 74/509 (14%)

Query: 89  LIHSD--WKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           LI +D  W K   L+   +  R  HV  ++    +   +L+FF W+         +    
Sbjct: 49  LISTDPHWPKNPELNRLASTLRPHHVSKIINTHINTDTALQFFYWISKRHFYKHDMGCFV 108

Query: 145 IVLHILTKNR--------------------KFKSSESILRGILDSDSFDLPSKLFDSILY 184
            +L+ L K++                    + K     L GI  SDS      LF   LY
Sbjct: 109 SMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFLHGISSSDS-----GLFGFTLY 163

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           S          F+ L           +A + + Q+   G  P + + N  ++ L    +V
Sbjct: 164 S----------FNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKV 213

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A+  + ++ +  + P+ +T   ++   C+   +++A EVF  M   G  P+  TY+TL
Sbjct: 214 QEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTL 273

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+G CN+G +  AM     M + GI+P V T+   I   C  G++ +A  +   M     
Sbjct: 274 INGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGC 333

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           SP+V TY  +I+G  + G  E+   +Y +ML+ G+  + +TYNALI  LC EG+   A  
Sbjct: 334 SPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALK 393

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG---------------- 468
           +   ++ +  + NA TY+ +I G     + E+A  ++  M++ G                
Sbjct: 394 IFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENL 453

Query: 469 -------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                              C P++  +  L+S FC+    D A     EML+  ++P+  
Sbjct: 454 KRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQW 513

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             + +  G    GK ++A+ LF +ME  G
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEENG 542



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/301 (24%), Positives = 133/301 (44%), Gaps = 6/301 (1%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           S  Y    C  SP    +  +   Y    K   A   F +M + G    IE+ N  +S L
Sbjct: 498 SFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGL 557

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               R   A  F  +M    + PN  T   +++  CK      A ++F  ME    +P+ 
Sbjct: 558 SKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNA 617

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY +LI G C +G +  A +    + +NG +P + T++TL+ G C++G+ +EA+++   
Sbjct: 618 HTYTSLIYGLCQEGKVDAAER----LTENGCEPTIDTYSTLVSGLCREGRSNEASQLVEN 673

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           MK   +SP++  Y +L+  + +    +    ++  M   G +  +  Y  LI  LC   +
Sbjct: 674 MKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSR 733

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A  + + L K     +   ++ L+ G     +S+   +    M    C P+ H + +
Sbjct: 734 AEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYII 793

Query: 479 L 479
           L
Sbjct: 794 L 794



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/284 (21%), Positives = 129/284 (45%), Gaps = 6/284 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D+   LF+ +      C +S   ++ +    +   +F  A     +M 
Sbjct: 517 AMIDGYCKEGKIDVALSLFERM--EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMT 574

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   +    ++ L  +   ++A   + EM +    PN +T   +++  C+ G ++
Sbjct: 575 EQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVD 634

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  + +N    G  P++ TY+TL+SG C +G  + A +    M++ G+ P++  + +L+
Sbjct: 635 AAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLL 690

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK  K+  A  IF+ M      P++  Y  LI     V  +E   ++++ +L+    
Sbjct: 691 VAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWN 750

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
            D++ +  L+ GL +EG +      +  ++  +  P+  TY  L
Sbjct: 751 SDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIIL 794



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 6/204 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      D   +L ++       C+ +   +  L        +   A+     M+
Sbjct: 622 SLIYGLCQEGKVDAAERLTEN------GCEPTIDTYSTLVSGLCREGRSNEASQLVENMK 675

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P +E     L +   S +VD AL  +  M      P+++   +++ A C +   E
Sbjct: 676 EKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAE 735

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+++    +   +  +  L+ G   +G   L MKF  LME     P++ T+  L 
Sbjct: 736 EALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILA 795

Query: 341 FGFCKKGKLHEANRIFSEMKATNV 364
               K GK    ++I + ++  ++
Sbjct: 796 RELSKVGKSIGTDQIGNRLREVSL 819


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 171/353 (48%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            C      + ++            A D F +M   G LP +   +  +  L    R+  AL
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEAL 1140

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             F+KEM    IS +VYT N ++H   + G+ +        M   GF P   T+  LI G 
Sbjct: 1141 EFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGL 1200

Query: 309  CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
            C +G +  A +   LM   G +P+++T+NTL+ G C  G+L +A ++F  +    +  NV
Sbjct: 1201 CKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNV 1260

Query: 369  VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             +YN LINGY +    +     +EEM   G+K   +TYN LI  LC+ G+ + A  L  +
Sbjct: 1261 FSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 1320

Query: 429  LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
            +         STY  L+ G C   + E A  L++S+ ++  +PN  +F +L+   C+   
Sbjct: 1321 MQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGK 1380

Query: 489  FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + A +   E+ +  + PD+I  + L +GL + G    A+KL  +ME +G LP
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLP 1433



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 165/366 (45%), Gaps = 36/366 (9%)

Query: 211  NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            +A   F +M   G L   ++    ++ L  + +  +A+  +++M+ N    +V+T  M++
Sbjct: 1034 DAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMII 1092

Query: 271  HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             A CK G+   A+++F  M   G +P V  Y++L+ G C  G L  A++F   ME  GI 
Sbjct: 1093 DALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGIS 1152

Query: 331  PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
             +V T+N+LI G  + G   E     + M     SP+  T+  LI+G  + G       +
Sbjct: 1153 ADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQI 1212

Query: 391  YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             E M   G + DILTYN L+ GLC  G+ + A  L + L    +  N  +Y+ LI G C 
Sbjct: 1213 LELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCK 1272

Query: 451  RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM----------- 499
             +  + AF+ ++ M   G +P+   +  L+   CQ+     A ++ +EM           
Sbjct: 1273 DQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332

Query: 500  -------------LEKCM-----------APDSIILSELYSGLHHCGKDELAMKLFRKME 535
                         LE+ M            P+  + S L  G+   GK E A K F ++ 
Sbjct: 1333 YCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEIS 1392

Query: 536  IRGLLP 541
              GL P
Sbjct: 1393 KNGLEP 1398



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 82/296 (27%), Positives = 148/296 (50%)

Query: 219  MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
            M D GF P   +    +  L    +V  A    + MR     P++ T N +M+  C +G 
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQ 1240

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            +E A ++F+++   G   +V +YN LI+G+C    +  A +F   M   G++P+ +T+NT
Sbjct: 1241 LEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNT 1300

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            LI   C+ G++  A ++F EM+       + TY  L++G  + G+ E    L++ + +  
Sbjct: 1301 LIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
             K +I  ++ L+ G+C+ GK ++A     ++ KN L P+   Y+ LI G C +     A 
Sbjct: 1361 HKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAV 1420

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +L   M   GC P+   F +++    +  +   A ++L EM  +  +PD  + S L
Sbjct: 1421 KLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 164/384 (42%), Gaps = 71/384 (18%)

Query: 225  LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL-------- 276
            +P  ++ N  L+S+            Y+++    I P++YTLN+++H  C L        
Sbjct: 943  MPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFG 1002

Query: 277  ----------------------GI-----IERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
                                  G+     I  AV++F  M   G +    TY  LI+G C
Sbjct: 1003 VFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLC 1062

Query: 310  NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
                  LA+K    M+ N  + +V T+  +I   CK G   EA  +FSEM    + P+VV
Sbjct: 1063 KARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVV 1121

Query: 370  TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL------------------ 411
             Y++L++G  + G  +     ++EM   GI  D+ TYN+LI                   
Sbjct: 1122 VYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLM 1181

Query: 412  -----------------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
                             GLCKEGK  +A  +++ +      P+  TY+ L+ G C+    
Sbjct: 1182 VDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQL 1241

Query: 455  ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            E A +L++S+   G + N   + +L++ +C+++  D A     EM  K + P ++  + L
Sbjct: 1242 EDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301

Query: 515  YSGLHHCGKDELAMKLFRKMEIRG 538
               L   G+   A KLF +M+  G
Sbjct: 1302 IGALCQSGRVRTAQKLFVEMQTCG 1325



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 135/285 (47%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            F +L        K   A      MR  G  P I + N  ++ L    +++ A   ++ + 
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               I  NV++ N++++ +CK   I+ A   F+ M   G  PS  TYNTLI   C  G + 
Sbjct: 1253 DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 1312

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             A K    M+  G    + T+  L+ G CK G L EA  +F  +K T   PN+  ++ L+
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            +G  + G  E     ++E+ +NG++ D + YN LI GLC +G   +A  L+  +++   +
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            P++ T++ +I           A QL + M      P++ +  ML+
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 94/185 (50%), Gaps = 2/185 (1%)

Query: 192  SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG-FLPIIESCNKFLSSLLDSERVDIALGF 250
            S + ++ L        + R A   F +M+  G FL +   C   L  L  +  ++ A+  
Sbjct: 1294 STVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYC-VLLDGLCKNGHLEEAMDL 1352

Query: 251  YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            ++ +++    PN+   ++++   C+ G +E A + F  +   G  P    YN LI+G CN
Sbjct: 1353 FQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCN 1412

Query: 311  KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            KG+LS A+K    ME+ G  P+ ITFN +I    K+ ++HEA ++  EM+  N SP+   
Sbjct: 1413 KGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAV 1472

Query: 371  YNTLI 375
             + L+
Sbjct: 1473 TSMLL 1477



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 110/273 (40%), Gaps = 3/273 (1%)

Query: 274  CKLGIIE--RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            C+ GII+   A+++F        +P   T+N L++     G  S        +   GIQP
Sbjct: 920  CRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQP 979

Query: 332  NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            ++ T N LI   C    +     +F         P+ VT  TL+ G            L+
Sbjct: 980  DLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLF 1039

Query: 392  EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +EM + G+  D  TY  LI GLCK  KT  A  L + + K +   +  TY  +I   C  
Sbjct: 1040 DEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKD 1098

Query: 452  KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              +  A  ++  MI +G  P+  ++  LM   C+      A E   EM  + ++ D    
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158

Query: 512  SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L  GL   G  +        M  RG  P  F
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAF 1191


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 166/310 (53%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A++ F +MR +   P   SCN  L  L    R D++  F+K+M    I  +V+T N+
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++   CK G +E A  +F  M+  GF P + TYN+LI GH   GLL   +     M+   
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             P+VIT+N LI  FCK  ++ +A     EMKA  + PNVVTY+T I+ + + G  +   
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
             + +M R  +  +  TY +LI   CK G   +A  LV+++ +  +  N  TY+AL+ G 
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     + A +++++M+ +G  PN+  +  L+  F + ++ + A ++L EM EKC+ PD 
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDL 301

Query: 509 IILSELYSGL 518
           ++   +  GL
Sbjct: 302 LLYGTILWGL 311



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 12/319 (3%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F QM+D    P + + N  ++     ER+  A  F  EM+ N + PNV T +  + AFCK
Sbjct: 114 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 173

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+++ A++ F +M  +   P+  TY +LI  +C  G L+ A+K    + + GI+ NV+T
Sbjct: 174 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 233

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  L+ G C++G++ EA  +F  M    V+PN  TY  L++G+ +    E    + +EM 
Sbjct: 234 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
              IK D+L Y  ++ GLC E + ++A  L+ ++ ++ +  NA  Y+ L+        + 
Sbjct: 294 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 353

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L + M+             L+   C+N  F+ A ++  EML+K M PD I  + L 
Sbjct: 354 EALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401

Query: 516 SGLHHCGKDELAMKLFRKM 534
            G    G  + A+ L  +M
Sbjct: 402 DGNMKHGNLQEALNLRDRM 420



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 149/291 (51%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + +MR+ R+ P   + N ++H   K+G  + + + FK+M + G   SV TYN +I   C 
Sbjct: 9   FLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCK 68

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G L +A      M++ G  P+++T+N+LI G  K G L E   IF +MK  +  P+V+T
Sbjct: 69  EGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVIT 128

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LIN + +            EM  NG+K +++TY+  I   CKEG  ++A     D+ 
Sbjct: 129 YNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMR 188

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           + +L PN  TY++LI   C   N   A +L + ++++G + N   +  L+   C+     
Sbjct: 189 RVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMK 248

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A EV   ML   +AP+    + L  G     + E A  + ++M+ + + P
Sbjct: 249 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 132/264 (50%)

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++E A E F  M      P   + N L+      G   L+ KF   M   GI+ +V T+N
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I   CK+G L  A  +F++MK    +P++VTYN+LI+G+G++G  +    ++E+M   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D++TYNALI   CK  +  KA   + ++  N L PN  TYS  I   C     + A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            + +  M R    PN+  +  L+   C+  +   A +++ E+L+  +  + +  + L  G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ + A ++FR M   G+ P
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAP 264



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 23/258 (8%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L  L +  R+  A   ++ M    ++PN  T   ++H F K   +E A ++ K M+   
Sbjct: 237 LLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKC 296

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL-------------- 339
             P +  Y T++ G CN+  L  A      ++++GI  N + + TL              
Sbjct: 297 IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEAL 356

Query: 340 ---------IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
                    + G CK      A ++F EM    + P+ + Y  LI+G  + GN +   +L
Sbjct: 357 TLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 416

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            + M+  G+++D+  Y ALI GL   G+ +KA  L+ ++    ++P+   Y  LI     
Sbjct: 417 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYA 476

Query: 451 RKNSERAFQLYKSMIRSG 468
               + A +L   M + G
Sbjct: 477 LGKVDEALELQNEMAKRG 494



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 2/210 (0%)

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L EA+  F +M+   V P   + N L++   +VG  ++    +++M   GIK  + TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I  LCKEG  + A  L   + +    P+  TY++LI G       +    +++ M  + 
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C P+   +  L++ FC+ E   +A E L EM    + P+ +  S         G  + A+
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 529 KLFRKMEIRGLLPKGF--DKLRTINCAPEN 556
           K F  M    L P  F    L   NC   N
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGN 211



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/272 (20%), Positives = 102/272 (37%), Gaps = 23/272 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L        + + A + F  M + G  P  E+    +   + ++ ++ A    KE
Sbjct: 232 VTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKE 291

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL--------- 304
           M+   I P++     ++   C    +E A  +   ++  G   +   Y TL         
Sbjct: 292 MKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQ 351

Query: 305 --------------ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
                         + G C      +A K  + M   G+ P+ I +  LI G  K G L 
Sbjct: 352 ATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 411

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA  +   M    +  ++  Y  LI G    G  +   +L +EM+  G+  D + Y  LI
Sbjct: 412 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 471

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                 GK  +A  L  ++ K  ++   S ++
Sbjct: 472 KKYYALGKVDEALELQNEMAKRGMITGLSDHA 503



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 112/285 (39%), Gaps = 41/285 (14%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + T++ +L  L +  + K +E + R +L++     P++                  + 
Sbjct: 229 LNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGV--APNQE----------------TYT 270

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L   +   K+   A D   +M++    P +      L  L +  R++ A     E++ +
Sbjct: 271 ALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKES 330

Query: 258 RISPNVYTLNMVMHAF-----------------------CKLGIIERAVEVFKNMESMGF 294
            I+ N      +M A+                       CK    E A ++F  M   G 
Sbjct: 331 GINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGM 390

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P    Y  LI G+   G L  A+  ++ M + G++ ++  +  LI+G    G++ +A  
Sbjct: 391 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 450

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +  EM    V P+ V Y  LI  Y  +G  +    L  EM + G+
Sbjct: 451 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 495


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 197/406 (48%), Gaps = 13/406 (3%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYR-MCDSSP 193
           ++E++ IV HIL   R +  + S+L+ ++    D D FD        +L+S R +C    
Sbjct: 9   SVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFD--------VLWSTRNVCVPGF 60

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            VFD LF           A   F +M+ +   P   SCN  L       + D    F+K+
Sbjct: 61  GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P V+T N+++   CK G +E A  +F+ M+  G +P   TYN++I G    G 
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L   + F   M+    +P+VIT+N LI  FCK GKL      + EMK   + PNVV+Y+T
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYST 240

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++ + + G  +     Y +M R G+  +  TY +LI   CK G    A  L  ++ +  
Sbjct: 241 LVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVG 300

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  N  TY+ALI G C  +  + A +L+  M  +G  PN   +  L+  F + ++ DRA 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           E+L E+  + + PD ++      GL    K E A  +  +M+  G+
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 406



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 166/332 (50%), Gaps = 4/332 (1%)

Query: 214 DTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           DT C   +M+D    P + + N  ++      ++ I L FY+EM+ N + PNV + + ++
Sbjct: 183 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 242

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            AFCK G++++A++ + +M  +G +P+  TY +LI  +C  G LS A +  N M + G++
Sbjct: 243 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 302

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            NV+T+  LI G C   ++ EA  +F +M    V PN+ +YN LI+G+ +  N +    L
Sbjct: 303 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 362

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             E+   GIK D+L Y   I GLC   K + A  ++ ++ +  +  N+  Y+ L+     
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 422

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-CMAPDSI 509
             N      L   M           F +L+   C+N+   +A +    +     +  ++ 
Sbjct: 423 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           I + +  GL    + E A  LF +M  +GL+P
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 514



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 183/412 (44%), Gaps = 40/412 (9%)

Query: 170 DSFDLPSKLFDSILYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D F    +L D++ +   M    C+   + ++ L   +    K     + + +M+  G  
Sbjct: 173 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 232

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-------- 277
           P + S +  + +      +  A+ FY +MRR  + PN YT   ++ A CK+G        
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 278 ---------------------------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
                                       ++ A E+F  M++ G IP++ +YN LI G   
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              +  A++  N ++  GI+P+++ + T I+G C   K+  A  + +EMK   +  N + 
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 412

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDL 429
           Y TL++ Y + GN   G  L +EM    I+V ++T+  LI GLCK     KA  Y  +  
Sbjct: 413 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 472

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           +   L  NA+ ++A+I G C     E A  L++ M++ G  P++  +  LM    +  + 
Sbjct: 473 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 532

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A  +  +M E  M  D +  + L  GL HC + + A     +M   G+ P
Sbjct: 533 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 584



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 2/330 (0%)

Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           + P VF  +++            A   F +M+  G +P   + N  +       R+D  +
Sbjct: 126 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 185

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM+     P+V T N +++ FCK G +   +E ++ M+  G  P+V +Y+TL+   
Sbjct: 186 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 245

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A+KF   M + G+ PN  T+ +LI   CK G L +A R+ +EM    V  NV
Sbjct: 246 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 305

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  LI+G       +    L+ +M   G+  ++ +YNALI G  K     +A  L+ +
Sbjct: 306 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 365

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+   Y   I G C  +  E A  +   M   G + N  I+  LM  + ++ +
Sbjct: 366 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 425

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
                 +L EM E  +    +    L  GL
Sbjct: 426 PTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-----FDLLFKTYAHRKKFRNATDT 215
           +++ G+ D++      +LF  +       D++ ++     ++ L   +   K    A + 
Sbjct: 310 ALIDGLCDAERMKEAEELFGKM-------DTAGVIPNLASYNALIHGFVKAKNMDRALEL 362

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             +++  G  P +     F+  L   E+++ A     EM+   I  N      +M A+ K
Sbjct: 363 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 422

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVI 334
            G     + +   M+ +    +V T+  LI G C   L+S A+ + N +  + G+Q N  
Sbjct: 423 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 482

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F  +I G CK  ++  A  +F +M    + P+   Y +L++G  + GN     +L ++M
Sbjct: 483 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 542

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
              G+K+D+L Y +L+ GL    + +KA   ++++    + P+
Sbjct: 543 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 585



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 99/219 (45%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L       G L EA + FS+MK   V P   + N L++ + ++G ++
Sbjct: 53  RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                +++M+  G +  + TYN +I  +CKEG  + A  L +++    LVP+  TY+++I
Sbjct: 113 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 172

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       +     ++ M    C P+   +  L++ FC+        E   EM    + 
Sbjct: 173 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 232

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P+ +  S L       G  + A+K +  M   GL+P  +
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 271



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 6/147 (4%)

Query: 257 NRIS------PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           NRIS       N      ++   CK   +E A  +F+ M   G +P  T Y +L+ G+  
Sbjct: 469 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 528

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G +  A+  ++ M + G++ +++ + +L++G     +L +A     EM    + P+ V 
Sbjct: 529 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 588

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRN 397
             +++  + ++G  +    L   ++++
Sbjct: 589 CISVLKKHYELGCIDEAVELQSYLMKH 615


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 195/419 (46%), Gaps = 21/419 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH++V+  L +    + +  ++ G+         SK   S  Y+       PL+  LL K
Sbjct: 276 THNVVITGLARKGDLEEAAEMVEGMR-------LSKKASSFTYN-------PLITGLLAK 321

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +      + A D   +M + G +P + + N  +  LL S +V+ A   + EMR   + P
Sbjct: 322 GFV-----KKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQP 376

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V T N +++ +CK G ++ A+ +F ++   G  P+V TYN LI G+C  G L  A + K
Sbjct: 377 DVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLK 436

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G  P+V T+  L+ G      L  A   F EM +  + P+   YNT I     +
Sbjct: 437 EEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTL 496

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L E M+  GI  D +TYN LI GLCK G    A  L   +  N L P+  TY
Sbjct: 497 GAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITY 556

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI   C R     A + +K MI  G  P+   + + +  +C+  +   A     +MLE
Sbjct: 557 TCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLE 616

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPENGE 558
           + + P+ I  + L   L   G+ +LA + F +M  RGL+P  +     I  NC   N E
Sbjct: 617 EGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWE 675



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 3/295 (1%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F +M  +G  P ++ CN+ L  L D+ R D     + EM +  I P++ T N ++ +F 
Sbjct: 189 AFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFL 248

Query: 275 KLGIIERAVEVFKNMESM--GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           K G  ++   + K ME+   G +P+  T+N +I+G   KG L  A +    M  +  + +
Sbjct: 249 KEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KAS 307

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+N LI G   KG + +A+ +  EM+   + P VVTYN +I+G  Q G  E     + 
Sbjct: 308 SFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFV 367

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   G++ D++TYN+L+ G CK G  K+A  L  DL    L P   TY+ LI G C   
Sbjct: 368 EMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLG 427

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           + E A +L + M+  GC P+   + +LM           A E   EML K + PD
Sbjct: 428 DLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPD 482



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 140/290 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +++L   Y        A     +M + G LP + +    +    ++  + +A  F+ E
Sbjct: 414 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDE 473

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N  + A   LG I +A  + + M   G      TYN LI G C  G 
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A   +  M  NG+QP+ IT+  LI   C++G L EA + F +M +  ++P+ VTY  
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+ Y + GN       + +ML  G++ + +TYN LI  LC+ G+T+ A     ++ +  
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           LVPN  TY+ LI G C   N E A + Y  M ++G  P+    + L   F
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 152/338 (44%), Gaps = 35/338 (10%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +MR  G  P + + N  L+    +  +  AL  + ++R   ++P V T N+++  +C+
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN--- 332
           LG +E A  + + M   G +P V TY  L+ G  N   L++A +F + M   G+QP+   
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485

Query: 333 --------------------------------VITFNTLIFGFCKKGKLHEANRIFSEMK 360
                                            +T+N LI G CK G L++A  +  +M 
Sbjct: 486 YNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMV 545

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              + P+ +TY  LI+ + + G        +++M+ +G+    +TY   I   C+ G   
Sbjct: 546 HNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLY 605

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A    + + +  + PN  TY+ LI   C    ++ A++ +  M+  G  PNK+ + +L+
Sbjct: 606 SAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLI 665

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              C+  +++ A     EM +  + PD +    L+ G 
Sbjct: 666 DGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 135/510 (26%), Positives = 239/510 (46%), Gaps = 44/510 (8%)

Query: 59  MNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPF-------RVKH 111
           M R PI    RT+             A  +L+HS  +  +A+   L+PF       R+  
Sbjct: 1   MRRAPIDDIPRTV------------TAILNLLHSG-RPWSAIEPDLSPFSGASTTPRIVG 47

Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSESILRG-ILDS 169
            ++   KD  L+L FF W     P  S T  + + +L +L + +K + +  + R  +L S
Sbjct: 48  RVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLAS 107

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPL--VFDLLFK---------TYAHR---KKFRNATD- 214
              D+ S  ++ ++  +  C++  L    +LL +          + H        NA D 
Sbjct: 108 CEPDVCS--YNIVISGF--CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDL 163

Query: 215 --TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
                 +R  G  P + +    +++   +++++ A+   +EMR     PN+ T N+++ A
Sbjct: 164 DGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDA 223

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            CKL ++  A +V K M   GF P+V T+N+L+ G C +G +  A K   +M   G++PN
Sbjct: 224 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 283

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T++ LI G CK  K  EA  +  EMK   V+P+  TY+ LI+G  +    E    +  
Sbjct: 284 VVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLR 343

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            M  +G   D++ Y+++I   CK GK  +A   ++++ K    P+  TY+ +I G C   
Sbjct: 344 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 403

Query: 453 NSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               A  + + M  SG   P+   +  +++  C+++    A ++L  M +    PD +  
Sbjct: 404 KIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 463

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  GL  CG+ E A  L + M+  G  P
Sbjct: 464 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAP 493



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 156/331 (47%), Gaps = 31/331 (9%)

Query: 142 THSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           T+S ++  L K++KF  ++ +L     RG+   D+F                       +
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVT-PDAF----------------------TY 322

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
             L        K   A     +M   G  P +   +  + +   S ++  A    +EMR+
Sbjct: 323 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 382

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG-FIPSVTTYNTLISGHCNKGLLS 315
            R SP+V T N V+   CKLG I  A  + + M+  G  +P V TY+T+I+G C   +L 
Sbjct: 383 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLV 442

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M K G  P+V+T+ T+I G CK G+L EA  +   MK    +PNVVTY TLI
Sbjct: 443 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 502

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL--DKNS 433
           +G  +    +    + EEM   G   +++TYN ++ GLC  G+ K+A  LV+ +   +  
Sbjct: 503 SGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAE 562

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSM 464
             P+A+TY  ++         + A QL + M
Sbjct: 563 CSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+V ++N +I GFC  G LH A  +  EMK+   +P+  T+  +I      G+ +    
Sbjct: 109 EPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD 168

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
               M   G   +++TY ALI    +  K ++A  L++++ +    PN  TY+ L+   C
Sbjct: 169 HLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALC 225

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                  A  + K MI  G  PN   F  L+  FC+  + D A ++L  M+ K M P+ +
Sbjct: 226 KLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVV 285

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             S L  GL    K   A ++  +M+ RG+ P  F
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAF 320


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 181/382 (47%), Gaps = 10/382 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F     + D +    + C  + + ++++        +  +A +   ++  
Sbjct: 193 LLEAVCKSSGFGEAMNVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 250

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P I S    L  L  + R D     + EM   +  PN  T +M++  FC+ G++ER
Sbjct: 251 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 310

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V + M   G  P+ T  N +I+  C +G +  A  F N M   G  P+ I++ T++ 
Sbjct: 311 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 370

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+ G+   A  +  EM   N  PN VT+NT I    Q G  E    L E M   G  V
Sbjct: 371 GLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSV 430

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            I+TYNAL+ G C +G+   A  L  +L      PN  TY+ L+TG C  +  + A +L 
Sbjct: 431 GIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELL 487

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             MI+  C  N   F +L+S FCQ    + A E++ +M+E    P+ I  + L  G+   
Sbjct: 488 AEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKD 547

Query: 522 GKDELAMKLFRKMEIRGLLPKG 543
              E A++L     + GL+ KG
Sbjct: 548 CNSEEALEL-----LHGLVSKG 564



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 3/355 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  S + + +L +       F  A +   +MR  G  P I + N  ++ +    RVD 
Sbjct: 181 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 240

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A      +      P++ +   V+   C     +    +F  M     +P+  T++ L+ 
Sbjct: 241 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C  G++  A++    M ++G  PN    N +I   CK+G++ +A    + M     +P
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + ++Y T++ G  + G  E    L  EM+R     + +T+N  I  LC++G  ++A  L+
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + +        TY+AL+ G CV+   + A +L+ ++    C PN   +  L++  C  
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHA 477

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E  D AAE+L EM++K    +++  + L S     G  E AM+L  +M   G  P
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 186/423 (43%), Gaps = 42/423 (9%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L+G+  +  +D    LF  ++   + C  + + FD+L + +        A     
Sbjct: 259 SYTTVLKGLCAARRWDDVKVLFAEMVD--KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 316

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIA------LGFY-------------------- 251
           QM  +G  P    CN  ++++    RVD A      +G Y                    
Sbjct: 317 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 376

Query: 252 ---------KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
                     EM R    PN  T N  +   C+ G+IE+A+++ + M   G    + TYN
Sbjct: 377 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 436

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            L+ G C +G +  A++ F NL      +PN IT+ TL+ G C   +L  A  + +EM  
Sbjct: 437 ALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQ 492

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            +   N VT+N L++ + Q G  E    L  +M+ +G   +++T+N L+ G+ K+  +++
Sbjct: 493 KDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEE 552

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L+  L    +  +  TYS+++        +E A Q+  ++   G RP   ++  ++ 
Sbjct: 553 ALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILF 612

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  + D+A +    M+     P+      L  GL H G  + A  +  ++  +G+L 
Sbjct: 613 ALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLS 672

Query: 542 KGF 544
           K  
Sbjct: 673 KSL 675



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 135/281 (48%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +    P+V T  +++ A CK      A+ V   M + G  P++ TYN +I+G C +G 
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  N +   G QP+++++ T++ G C   +  +   +F+EM      PN VT++ 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+  + + G  E    + ++M ++G   +    N +I  +CK+G+   A   + ++    
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  +Y+ ++ G C     E A +L   M+R  C PN+  F   +   CQ    ++A 
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +++  M E   +   +  + L  G    G+ + A++LF  +
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL 458



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 88/185 (47%)

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           S M      P+VVTY  L+    +        ++ +EM   G   +I+TYN +I G+C+E
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+   A  ++  L      P+  +Y+ ++ G C  +  +    L+  M+   C PN+  F
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           +ML+  FC+    +RA +VL +M +    P++ + + + + +   G+ + A      M +
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 537 RGLLP 541
            G  P
Sbjct: 356 YGCNP 360


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L    A  K +      + QMR  G      + N  L+ L +  R+      +  + 
Sbjct: 72  FNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGIL 131

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R   SPN+ T N ++   C    I  A  +F  M+ +G  P V TY TLI G C  G ++
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNIN 191

Query: 316 LAMKFKNLMEKN------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +A+K    M  +        +PNVIT+N ++ G CK G+  EA ++F EMK   + P+++
Sbjct: 192 IALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSII 251

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +YN+LI+G+   G  E    L +EML  G++ D++T+N LI  LCKEGK  +A  L+  +
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            ++ +VP+  TY++LI G C+  +   A +L+ SM   GC P+   + +L++ + +    
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + A ++  EML     P+ I    L  G+   GK + A KLF  M+  G+    +
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 179/355 (50%), Gaps = 8/355 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L K      +   AT  F +M+  G  P + +    +  L  +  ++IAL  ++E
Sbjct: 140 VTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQE 199

Query: 254 MRRNRIS-------PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           M  N IS       PNV T N+++   CK+G  + A ++F+ M++ G IPS+ +YN+LI 
Sbjct: 200 ML-NDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIH 258

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G    + +  + M   G+QP+++TFN LI   CK+GK+ EA ++   M  + + P
Sbjct: 259 GFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVP 318

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VTYN+LI G+  VG+      L+  M   G + D+++YN LI G  K  K ++A  L 
Sbjct: 319 DLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLY 378

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN  TY +L+ G  +    + A +L+  M   G   N + + + +   C+N
Sbjct: 379 NEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKN 438

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    A ++  E+       +   L+ L  GL   GK E A +LF K+   G  P
Sbjct: 439 DCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEP 493



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 161/322 (50%), Gaps = 6/322 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S N  LS L   +        Y +MR + +S +  TLN++++  C +  +      
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +   G+ P++ TYNTLI G C +  +S A +    M+K G  P+V+T+ TLI G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 346 KGKLHEANRIFSEM------KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
            G ++ A ++  EM         N  PNV+TYN +++G  +VG  +    L+EEM   G+
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              I++YN+LI G C  GK +++  L+ ++    L P+  T++ LI   C       A +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   MI SG  P+   +  L+  FC   D + A E+ + M  K   PD I  + L +G  
Sbjct: 307 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 366

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
              K E AMKL+ +M + G  P
Sbjct: 367 KTLKVEEAMKLYNEMLLVGKRP 388



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/355 (29%), Positives = 172/355 (48%), Gaps = 4/355 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   +    K+  +     +M D G  P + + N  + +L    +V  A    
Sbjct: 249 SIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLL 308

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M  + I P++ T N ++  FC +G +  A E+F +M S G  P V +YN LI+G+   
Sbjct: 309 GVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKT 368

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  AMK  N M   G +PNVIT+++L+ G    GK+ +A ++FS MKA  ++ N  TY
Sbjct: 369 LKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTY 428

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
              ++G  +         L+ E+  +  K++I   N LI GLCK GK + A  L + L  
Sbjct: 429 GIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSN 488

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               PN  TY+ +I G C     ++A  L + M  +GC P+   +  LM  F ++   + 
Sbjct: 489 EGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE 548

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
             ++L  M +K ++PD+I  S +   L    K +  + L  +  I+    KG DK
Sbjct: 549 VVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQ----KGVDK 599



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 182/388 (46%), Gaps = 4/388 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYS---YRM-CDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++++G+  + + ++  KL   +L     Y + C  + + ++++        +   A   F
Sbjct: 179 TLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLF 238

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M+  G +P I S N  +     + + + +     EM    + P++ T N+++   CK 
Sbjct: 239 EEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKE 298

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G +  A ++   M   G +P + TYN+LI G C  G L+ A +    M   G +P+VI++
Sbjct: 299 GKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISY 358

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G+ K  K+ EA ++++EM      PNV+TY++L+ G    G  +    L+  M  
Sbjct: 359 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 418

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           +GI  +  TY   + GLCK     +A  L  +L  ++        + LI G C     E 
Sbjct: 419 HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLET 478

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A++L++ +   G  PN   + +++  FC+    D+A  ++ +M      PD I  + L  
Sbjct: 479 AWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 538

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           G +   K E  ++L  +M  + + P   
Sbjct: 539 GFYESNKLEEVVQLLHRMAQKDVSPDAI 566



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 140/325 (43%), Gaps = 45/325 (13%)

Query: 260 SPNVYTLNMVMHAFCKLGIIE--RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           SPN      + H  CK G +    A+  F  M      PS++++N L+SG       S  
Sbjct: 31  SPNPQIAFFLRH--CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               N M  +G+  +  T N L+   C   +L E    F+ +     SPN+VTYNTLI G
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 378 ----------------------------YGQV-------GNSEMGASLYEEMLRN----- 397
                                       YG +       GN  +   L++EML +     
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 398 -GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
              K +++TYN ++ GLCK G+  +A  L +++    ++P+  +Y++LI G C     E 
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           + +L   M+  G +P+   F +L+ T C+      A ++L  M+E  + PD +  + L  
Sbjct: 269 SKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 328

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G    G    A +LF  M  +G  P
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEP 353



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 8/255 (3%)

Query: 295 IPSVTTYNTLISGHCNKGLLSL--AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           IPS          HC  G ++   A+ F +LM ++   P++ +FN L+ G  K     + 
Sbjct: 29  IPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             ++++M+ + +S +  T N L+N    V     G + +  +LR G   +I+TYN LI G
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS----- 467
           LC E +  +A  L   + K    P+  TY  LI G C   N   A +L++ M+       
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 468 -GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
             C+PN   + +++   C+    D A ++  EM  + M P  I  + L  G    GK E 
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268

Query: 527 AMKLFRKMEIRGLLP 541
           + +L  +M  +GL P
Sbjct: 269 SKRLLDEMLDQGLQP 283


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 179/350 (51%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F  L  + A  K +        QM  +G  P + + N  ++S     R+  A    
Sbjct: 111 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 170

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T N ++   C  G I  A+ +F      GF P V TY TL++G C  
Sbjct: 171 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 230

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    M +   +PNVI +NT+I   CK  ++ EA  +FSEM    +SP++ TY
Sbjct: 231 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 290

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+    +   +   +L  EM+ + I  +++ ++ ++  LCKEG    A  +V  + K
Sbjct: 291 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 350

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + P+  TY+AL+ G C+R   + A +++ +M+  GC PN   + +L++ +CQ +  D+
Sbjct: 351 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 410

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +L +M  + +  D++  + L  GL H G+ + A+ LF +M   G +P
Sbjct: 411 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 460



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 139/270 (51%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  + SL    +V  A   + EM    ISP+++T N ++HA C L   +    +
Sbjct: 250 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 309

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M +   +P+V  ++T++   C +G++++A    ++M K G++P+V+T+  L+ G C 
Sbjct: 310 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 369

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ EA ++F  M      PNV +YN LINGY Q+   +    L E+M   G+  D +T
Sbjct: 370 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 429

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLC  G+ + A  L  ++  +  +P+  TY  L+   C   +   A  L K++ 
Sbjct: 430 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 489

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            S    +  ++ + +   C+  + + A ++
Sbjct: 490 GSNLDADILVYNIAIDGMCRAGELEAARDL 519



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 176/411 (42%), Gaps = 22/411 (5%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLF------DSILYSYRM-------------- 188
           +LT   K K   ++L      DSF +P  ++      +S  +  R+              
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F+ L +      K   A   F +    GF P + +    ++ L        A+
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M +    PNV   N ++ + CK   +  A  +F  M + G  P + TYN+LI   
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN           N M  + I PNV+ F+T++   CK+G +  A+ +   M    V P+V
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 357

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  L++G+      +    +++ M+  G   ++ +YN LI G C+  +  KA  L++ 
Sbjct: 358 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 417

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L+ +  TY+ LI G C     + A  L+  M+ SG  P+   + +L+   C+N  
Sbjct: 418 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 477

Query: 489 FDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              A  VLL+ +E   +  D ++ +    G+   G+ E A  LF  +  +G
Sbjct: 478 LAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQG 527


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/520 (26%), Positives = 233/520 (44%), Gaps = 62/520 (11%)

Query: 57  MKMNRNPIPIPHRTLPEP-KGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLK 115
           +K  ++P P    T P P K   L+   ++ SH++                      +L+
Sbjct: 11  LKPRKSPTPFVLATNPNPEKANSLNVCPVSESHVVK---------------------VLR 49

Query: 116 VQKDYVLSLEFFTWVQ---THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
            + D V SLE+F  +    T K + LT ET   ++  L +N +      +L+  +  ++ 
Sbjct: 50  QEHDIVSSLEYFKSLSNSGTFKHTHLTYET---MIDKLGRNNEMDGVSYLLQQ-MKLENV 105

Query: 173 DLPSKLFDSILYSYRM------------------CDSSPLVFDLLFKTYAHRKKFRNATD 214
               +LF  ++  YR                   C+ S  +++L+      +  F+    
Sbjct: 106 PCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINA 165

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            +  M+  G  P + + N  L +L  + +VD A     EM      P+  +   V+ + C
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           KLG +++A E+     +M F P V  YN LI G C +     A    N M   G+ PNVI
Sbjct: 226 KLGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVI 280

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY---GQVGNSEMGASLY 391
           +++T+I      G +  +  +F  M      PNV T+ +LI G+   G+VG++     L+
Sbjct: 281 SYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA---VGLW 337

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
             M+R G+  +++ YN LI GLC +G   +A  +   ++K+S+ PN +TYS +I G    
Sbjct: 338 NLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKS 397

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            +   A + +  MI  GCRPN  ++  ++   CQ   FD+A +++  M+     P  I  
Sbjct: 398 GDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITF 457

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           +    GL   G+ E AM +  +ME    LP     +RT N
Sbjct: 458 NNFIKGLCRAGRVEWAMNVLDQMEKYECLP----NIRTYN 493



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 151/316 (47%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P++   N  +  +    R   A     EM    + PNV + + V+     +G +E ++
Sbjct: 240 FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSL 299

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            VF  M   G  P+V T+ +LI G   +G +  A+   NLM + G+ PNV+ +NTLI G 
Sbjct: 300 AVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGL 359

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C  G + EA  ++++M+  ++ PNV TY+T+I G+ + G+       + +M+  G + ++
Sbjct: 360 CSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNV 419

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           + Y  ++  LC+     +A  L+ ++  +   P   T++  I G C     E A  +   
Sbjct: 420 VVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQ 479

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M +  C PN   +  L+    +   F  A  ++ E+ E+ +  D +  + +  G    G 
Sbjct: 480 MEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGM 539

Query: 524 DELAMKLFRKMEIRGL 539
            +  ++L  KM + G+
Sbjct: 540 HQQVLQLLGKMLVNGI 555



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 165/338 (48%), Gaps = 2/338 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V++ L        +F+ A D   +M D G  P + S +  +S L D   V+++L  +  M
Sbjct: 246 VYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM 305

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PNV T   ++  F   G +  AV ++  M   G  P+V  YNTLI G C+ G +
Sbjct: 306 FVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNM 365

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+   N MEK+ I+PNV T++T+I+GF K G L  A   +++M      PNVV Y  +
Sbjct: 366 DEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCM 425

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++   Q+   +    L + M+ +G    ++T+N  I GLC+ G+ + A  ++  ++K   
Sbjct: 426 VDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYEC 485

Query: 435 VPNASTYSALITGQCVRKNSER-AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +PN  TY+ L+ G   R N+ R A  L + +       +   +  +M  F  N    +  
Sbjct: 486 LPNIRTYNELLDG-LFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVL 544

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           ++L +ML   +  D+I ++   +     GK + A+K+ 
Sbjct: 545 QLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVL 582



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/401 (23%), Positives = 179/401 (44%), Gaps = 19/401 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
            ++ ++H + K  +FK            ++FDL +++ D      R  D + + +  +  
Sbjct: 246 VYNALIHGVCKECRFK------------EAFDLMNEMVD------RGVDPNVISYSTVIS 287

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
             +       +   F +M   G  P +++    +       RV  A+G +  M R  +SP
Sbjct: 288 CLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSP 347

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV   N ++H  C  G ++ A+ V+  ME     P+VTTY+T+I G    G L  A +  
Sbjct: 348 NVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETW 407

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M   G +PNV+ +  ++   C+     +A  +   M +    P V+T+N  I G  + 
Sbjct: 408 NKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRA 467

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  E   ++ ++M +     +I TYN L+ GL +    ++A  L+++L++  +  +  TY
Sbjct: 468 GRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTY 527

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM-L 500
           + ++ G       ++  QL   M+ +G + +       ++ +C+      A +VL  +  
Sbjct: 528 NTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISA 587

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EK    D I  + +  G+ +    E A+    +M  RG+ P
Sbjct: 588 EKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFP 628



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 147/361 (40%), Gaps = 73/361 (20%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++  + D  + +L   +F  +    R C  +   F  L K +  R +  +A   + 
Sbjct: 281 SYSTVISCLSDMGNVELSLAVFGRMFV--RGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN 338

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF---- 273
            M   G  P + + N  +  L     +D A+  + +M ++ I PNV T + +++ F    
Sbjct: 339 LMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSG 398

Query: 274 -------------------------------CKLGIIERAVEVFKNMESMGFIPSVTTYN 302
                                          C++ + ++A ++  NM S G  P+V T+N
Sbjct: 399 DLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFN 458

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
             I G C  G +  AM   + MEK    PN+ T+N L+ G  +     EA  +  E++  
Sbjct: 459 NFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEER 518

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD-------------------- 402
            V  + VTYNT++ G+   G  +    L  +ML NGIK+D                    
Sbjct: 519 KVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTA 578

Query: 403 ----------------ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                           I+T+  ++ G+C    T++A   + ++ K  + PN +T++ L+ 
Sbjct: 579 IKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVR 638

Query: 447 G 447
           G
Sbjct: 639 G 639



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 91/208 (43%), Gaps = 3/208 (1%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           FD    L D+++     C  + + F+   K      +   A +   QM  Y  LP I + 
Sbjct: 435 FDQAFDLIDNMISD--GCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTY 492

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N+ L  L  +     A G  +E+   ++  +  T N +M+ F   G+ ++ +++   M  
Sbjct: 493 NELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLV 552

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            G      T NT ++ +C  G +  A+K   N+  +   + ++IT   +++G C      
Sbjct: 553 NGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTE 612

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGY 378
           EA     EM    + PN+ T+N L+ G+
Sbjct: 613 EAVVYLHEMLKRGIFPNIATWNVLVRGF 640


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 168/347 (48%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   G  P + + N  L  L   +RV  AL  + +M 
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ ++ +I   CK G+  +A  +F+EM+   + P++ TYN++
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G       L +EML   I  D++TYNALI    KEGK  +A  L  ++    +
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS++I G C +   + A  ++  M   GC PN   F  L+  +C  +  D   E
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGME 416

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G +  G    A+ L ++M   GL P
Sbjct: 417 LLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 184/380 (48%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TY+++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  PN+ITFNTLI G+C   ++ +   +  EM  T +  +  TYNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------- 426
           LI+G+  VG+      L +EM+ +G+  DI+T + L+ GLC  GK K A  +        
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 427 KDLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           KDLD     N + P+  TY+ LI+G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++   M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVAN 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AITYITLICGFRKVGNINGA 635



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 169/336 (50%), Gaps = 1/336 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +G  P V T+NTL+ G C +  +S A+   + M +
Sbjct: 118 TILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  ++G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
              L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  A E+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  S +  G     + + A  +F  M  +G  P
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP 393



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 180/389 (46%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + +  +       R+D A   +  M     SPN+ T N ++  +C    I+
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G +   TTYNTLI G    G L+ A+     M  +G+ P+++T +TL+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDEL--AMKLFRKMEI 536
            +  + +GL    K+EL  A+ +  K+++
Sbjct: 653 TIRNMLTGLWS--KEELKRAVAMLEKLQM 679



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 158/350 (45%), Gaps = 11/350 (3%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            +P +   +  + SL    R   A   + EM+   I P+++T N ++  FC  G    A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++ + M      P V TYN LI+    +G    A +  + M   GI PN IT++++I GF
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+ +L  A  +F  M     SPN++T+NTLI+GY      + G  L  EM   G+  D 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            TYN LI G    G    A  L++++  + L P+  T   L+ G C     + A +++K 
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490

Query: 464 MIRS-----------GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           M +S           G  P+   + +L+S       F  A E+  EM  + + PD+I  S
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            +  GL    + + A ++F  M  +   P        IN   + G  + G
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 150/322 (46%), Gaps = 12/322 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +  + +   A   F  M   G  P + + N  +     ++R+D  +    E
Sbjct: 361 ITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHE 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +  T N ++H F  +G +  A+++ + M S G  P + T +TL+ G C+ G 
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGK 480

Query: 314 LSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           L  A++   +M+K           NG++P+V T+N LI G   +GK  EA  ++ EM   
Sbjct: 481 LKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 540

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TY+++I+G  +    +    +++ M       +++T+  LI G CK G+    
Sbjct: 541 GIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDG 600

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L  ++ +  +V NA TY  LI G     N   A  +++ MI SG  P+      +++ 
Sbjct: 601 LELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTG 660

Query: 483 FCQNEDFDRAAEVLLEMLEKCM 504
               E+  RA   +LE L+  M
Sbjct: 661 LWSKEELKRAV-AMLEKLQMSM 681


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 150/509 (29%), Positives = 236/509 (46%), Gaps = 59/509 (11%)

Query: 87  SHLIHSDWKKLTALSTHLTP-----FRVKHVLLKVQKDYVLS--LEFFTWVQTHKPSSLT 139
           +HL    + ++ AL++   P      RV H+LL+      L   +    W + H  + L 
Sbjct: 8   AHLTAGRFGRVLALTSGGAPTASAAHRVLHLLLRTSPPPPLPRLVAIARWSRAHFRAPLP 67

Query: 140 LET--------------HSIV---LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           L                HS++   LH+L   R   S  SILR         LP+      
Sbjct: 68  LRLHALLLARLASDGSLHSLLRSELHVLAAGR-LHSPASILRA--------LPA------ 112

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF------CQMRDYGFLPIIESCNKFLS 236
                   S PLV D+L    A   +   A + F      C      + P   S N  L+
Sbjct: 113 -------SSGPLVADMLVLALARASQPLAAYEAFLLAGADCPR----YRPSAFSVNALLA 161

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +L+ ++RVD+A   ++   R R+SP+++T N+V+  FCK G + +A +V KN+ + G  P
Sbjct: 162 ALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAP 221

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLME---KNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           SV TYNTLI G+C +G +        L++   + GI P+V+TFN LI G+CK+  +  A 
Sbjct: 222 SVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAI 281

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F EM+   +  NVVTYN+L++G  + G  E    L EEM   G+   + T N+++ G 
Sbjct: 282 KVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGF 341

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK+G   +A   V  + +  + PN  TY+ L+ G       + A     +M   G  PN 
Sbjct: 342 CKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNV 401

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L++ F  + D+   + +L EM EK +  D +  + L   L   G+   A+KL  +
Sbjct: 402 KTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDE 461

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKESG 562
           M   GL PK       IN   E G+ +  
Sbjct: 462 MVEVGLEPKHVAYNTIINGFCEKGDAQGA 490



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 173/361 (47%), Gaps = 38/361 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL---GFYK 252
           F+++   +    + R A D    +  +G  P + + N  +       +V          K
Sbjct: 191 FNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLK 250

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM +  ISP+V T N++++ +CK   I  A++VF+ M   G   +V TYN+L+SG C +G
Sbjct: 251 EMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREG 310

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  ++K    ME+ G+   + T N+++ GFCKKG + EA      +    + PNV+TYN
Sbjct: 311 KVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYN 370

Query: 373 TLINGYGQVGNSEMG-----------------------------------ASLYEEMLRN 397
           TL++GY ++G  +                                     + L +EM   
Sbjct: 371 TLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEK 430

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+K D++TYN LI  LC +G+ +KA  L+ ++ +  L P    Y+ +I G C + +++ A
Sbjct: 431 GVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGA 490

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++   M +   R N   + + +  FC+    D A  VL EMLEK + P+ I    + SG
Sbjct: 491 HEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG 550

Query: 518 L 518
           +
Sbjct: 551 M 551



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 2/308 (0%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           D++L        SP  + F++L   Y        A   F +MR  G    + + N  +S 
Sbjct: 246 DALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSG 305

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L    +V+ ++   +EM    ++  + T+N V++ FCK G++  A      +   G  P+
Sbjct: 306 LCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPN 365

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V TYNTL+ G+   G +  A   K+ M   GI PNV T+N LI GF         + +  
Sbjct: 366 VITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLD 425

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EMK   V  +VVTYN LI      G       L +EM+  G++   + YN +I G C++G
Sbjct: 426 EMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKG 485

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             + A  +   ++K     N  TY+  +   C     + A  +   M+  G  PN+  +E
Sbjct: 486 DAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYE 545

Query: 478 MLMSTFCQ 485
           ++ S   +
Sbjct: 546 IINSGMIE 553



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 84/174 (48%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ISPNV T N ++  F           +   M+  G    V TYN LI   C KG +  A+
Sbjct: 397 ISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAV 456

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M + G++P  + +NT+I GFC+KG    A+ I   M+      NVVTYN  +  +
Sbjct: 457 KLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYF 516

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            ++G  +    +  EML  G+  + +TY  +  G+ ++G     +    D+ KN
Sbjct: 517 CKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDISGYAADVSKN 570


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/436 (30%), Positives = 206/436 (47%), Gaps = 25/436 (5%)

Query: 106 PFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRG 165
           P  +  VL  +++   ++L FF  V T      +      +L IL  N   KS+  ++  
Sbjct: 105 PQLLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMER 164

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           I+  + + +   L    L +Y+      LVF+         K  RN            FL
Sbjct: 165 IISFEMYGIVDVLIGGYL-NYQCL----LVFE---------KMMRNR-----------FL 199

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +++CN+ L  L D   +  AL  Y+ M    I P V T N ++H+FCK G ++RA+++
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M+  G  PS  T+N LI+G   KG L  A      M K G++ +  T+N LI G+CK
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           KG L EA  ++ EM    VSP V ++NT++ G+ + G          +ML+  +  DI++
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI G C+ G   +A  L+ +L   +L  N  TY+ LI G C   + E A +L + MI
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  P+   + +L++  C+  +   A E   EML   +APD    +    G    G   
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499

Query: 526 LAMKLFRKMEIRGLLP 541
            A KL  +M  +G  P
Sbjct: 500 KAFKLQEEMLTKGFPP 515



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 183/348 (52%), Gaps = 4/348 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ +  ++    + + A D   +M++ G  P   + N  ++ L     +  A G  +EM 
Sbjct: 240 YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMA 299

Query: 256 RN--RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +   R+SP  YT N ++  +CK G++  A+ +++ M + G  P+V ++NT++ G C +G 
Sbjct: 300 KAGLRVSP--YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGK 357

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A +  + M K  + P++I++NTLI+GFC+ G + EA  +  E++  N+S N+VTYNT
Sbjct: 358 MSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNT 417

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  ++G+ E    L E+M+  GI  D++TY  L+ G CK G    A     ++    
Sbjct: 418 LIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+   Y+A I G+    ++ +AF+L + M+  G  P+   + + ++  C+  + + A 
Sbjct: 478 LAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAG 537

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E+L +M+     PD +  +         G      ++F  M  RG  P
Sbjct: 538 ELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 167/360 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  ++ L   Y  +     A   + +M   G  P + S N  +       ++  A    
Sbjct: 306 SPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQL 365

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M +  + P++ + N +++ FC+LG I  A  +   +       ++ TYNTLI G C  
Sbjct: 366 SDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRL 425

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A+K K  M   GI P+V+T+  L+ G CK G +  A   F EM    ++P+   Y
Sbjct: 426 GDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAY 485

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
              I G  ++G++     L EEML  G   D++TYN  + GLCK G  ++A  L++ + +
Sbjct: 486 TARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIR 545

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +  VP+  TY++ +       +     +++  M+  G  P    + +L+     N   D 
Sbjct: 546 DGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDW 605

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A    LEM EK + P+ I  + L +G     K + A K F +M+ +G+ P  +     IN
Sbjct: 606 AMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILIN 665



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 132/281 (46%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I + N  +  L     ++ AL   ++M    I P+V T  ++++  CKLG +  A E F 
Sbjct: 412 IVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFD 471

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M  +G  P    Y   I G    G  + A K +  M   G  P+VIT+N  + G CK G
Sbjct: 472 EMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLG 531

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            L EA  +  +M      P+ VTY + ++ + + G+   G  ++ +ML  G    ++TY 
Sbjct: 532 NLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYT 591

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI      G+   A     ++ +  +VPN  TY+ LI G C  +  ++A + +  M   
Sbjct: 592 VLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEK 651

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           G  PNK+ + +L++  C    +  A  +  +ML K + PDS
Sbjct: 652 GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 111/217 (51%), Gaps = 3/217 (1%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P + + N F++ L     ++ A    ++M R+   P+  T    MHA  + G
Sbjct: 507 EMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENG 566

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +    E+F +M S G  P+V TY  LI  H   G L  AM +   M++ G+ PNVIT+N
Sbjct: 567 HLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYN 626

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI GFCK  K+ +A + F EM+   + PN  TY  LIN    +G  +    LY +ML  
Sbjct: 627 VLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGK 686

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAY---LVKDLDK 431
            I+ D  T+ AL+  L K+ K +   +   L+ D D+
Sbjct: 687 RIRPDSCTHGALLKKLDKDYKVQAVQFIESLILDGDR 723



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 1/224 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    +EM      P+V T N+ ++  CKLG +E A E+ + M   G +P   TY + + 
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            H   G L    +    M   G  P V+T+  LI      G+L  A   F EM+   V P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV+TYN LING+ +V   +     + EM   GI  +  TY  LI   C  GK ++A  L 
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             +    + P++ T+ AL+  +  +    +A Q  +S+I  G R
Sbjct: 681 AQMLGKRIRPDSCTHGALLK-KLDKDYKVQAVQFIESLILDGDR 723



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 71/149 (47%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
            R   + F  M   G  P + +    + +   + R+D A+ ++ EM+   + PNV T N+
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++ FCK+  +++A + F  M+  G  P+  TY  LI+ +CN G    A++    M    
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           I+P+  T   L+    K  K+     I S
Sbjct: 688 IRPDSCTHGALLKKLDKDYKVQAVQFIES 716



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/112 (22%), Positives = 53/112 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   +A   +   A   F +M++ G +P + + N  ++      ++D A  F+ E
Sbjct: 588 VTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIE 647

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           M+   I PN YT  ++++  C +G  + A+ ++  M      P   T+  L+
Sbjct: 648 MQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 169/333 (50%), Gaps = 1/333 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + + +L        K   A +   +M D G +P + + N  L  L  + RV  
Sbjct: 142 RGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSD 201

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   ++M     +PNV T   ++   CK+G ++ A  +  +M   G  P +  YN LI+
Sbjct: 202 ALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLIN 261

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +  ++         GI+P+V+T++++I+G C+  +L EA R+   +K+    P
Sbjct: 262 GLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPP 321

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V+ Y+TLI+G  + G  +    LYE M  +G   D++TY+ LI GLCK G+  +A  L+
Sbjct: 322 DVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLL 381

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +    P+  TY++LI G C   + + A +L + M RS C P+   + +L+   C+ 
Sbjct: 382 ARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRM 441

Query: 487 EDFDRAA-EVLLEMLEKCMAPDSIILSELYSGL 518
           E  D AA +   EM++  + PD I  S L  GL
Sbjct: 442 ERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 193/420 (45%), Gaps = 21/420 (5%)

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           E F  +++ + S  ++ T++ +L  L +  K + + ++ + +LD  S D+ S        
Sbjct: 31  ELFEHMKSVECSP-SMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVIS-------- 81

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
                      F++L        K   A + F +M D    P + + +  +  L  + RV
Sbjct: 82  -----------FNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANRV 129

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A+   + M+    SP+V T  +++   CK   +  A EV + M   G +P++ TYN+L
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 189

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           + G C    +S A+     M   G  PNV+T+ TLI G CK G++ +A  + ++M     
Sbjct: 190 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 249

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+++ YN LING  +    +   +L    +  GIK D++TY+++I GLC+  +  +A  
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L+  +      P+   YS LI G C     + AF LY+ M   GC  +   +  L+   C
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +    D A  +L  M+     P ++  + L  GL      + A++L  +ME     P   
Sbjct: 370 KAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAV 429



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 4/289 (1%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR +   PNV T N ++   CK    +RA E+F++M+S+   PS+ TYNTL+ G    G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L  AM  F+ ++++     +VI+FN L+ G C+ GK+  A   F +M     SPNV+TY+
Sbjct: 61  LERAMALFQEMLDRR--SHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYS 117

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+G  +         L E M   G   D++TY  L+ GLCKE K   A  +++++   
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             VPN  TY++L+ G C  +    A  L + M   GC PN   +  L+   C+      A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +L +M++K   PD +I + L +GL    + + ++ L R+    G+ P
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKP 286



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 2/323 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MRD+G  P + + N  +  L  +   D A   ++ M+    SP++ T N ++    + G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +ERA+ +F+ M        V ++N L++G C  G +  A++F   M+     PNVIT++ 
Sbjct: 61  LERAMALFQEMLDRRS-HDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSV 118

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK  ++ +A  +   MKA   SP+V+TY  L++G  +         +  EML  G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              +++TYN+L+ GLC+  +   A  L++D+      PN  TY  LI G C     + A 
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            +   MI  G  P+  I+ ML++  C+ +  D +  +L   +   + PD +  S +  GL
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + + A +L   ++ RG  P
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPP 321



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 57/342 (16%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY---------------- 184
           T++I++  L K  K  ++  +LR +LD+    +P+ + ++S+L+                
Sbjct: 150 TYTILVDGLCKESKVAAAWEVLREMLDAGC--VPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 185 --SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
             + R C  + + +  L        + ++A      M D G  P +   N  ++ L  ++
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD ++   +      I P+V T + V++  C+   ++ A  +   ++S G  P V  Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS----- 357
           TLI G C  G +  A     +M  +G   +V+T++TLI G CK G++ EA+ + +     
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387

Query: 358 ------------------------------EMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                                         EM+ +N +P+ VTYN LI+G  ++   +  
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447

Query: 388 A-SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           A   ++EM+ NG+  D +TY+ L+ GL K     +  +LV D
Sbjct: 448 ALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 489


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 180/351 (51%), Gaps = 4/351 (1%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-IIESCNKFLSSLLDSERVDIALGFYK 252
            ++ +++ K     +K  +A + F +M + G  P  + + +  + SL+ S +VD A    +
Sbjct: 913  ILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVE 972

Query: 253  EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            +M     SPNV T + ++H  CK G ++ A  + + M   G  P++ TYNT+I GHC  G
Sbjct: 973  DMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLG 1032

Query: 313  LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             +  A      M   G QPNV+T+  L+  FCK GK  +A  +   M      PN+ TYN
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092

Query: 373  TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            +L++ + +    E    L   M++ G   ++++YN +I GLCK  K  +   L++ +  N
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152

Query: 433  SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + VP+  T++ +I   C     + A++L+  +  SGC PN   +  L+   C++  FD+A
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212

Query: 493  AEVLLEMLEK--CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +L EM  K  C +PD I  + +  GL    + + A KLF +M   GL P
Sbjct: 1213 EYLLREMTRKQGC-SPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 1262



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 187/383 (48%), Gaps = 30/383 (7%)

Query: 143  HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF------DSILYSYRMCDSSPLVF 196
            H++V+  L   RK  S+  + + + +S S   P  +F      DS++ S ++ D+  LV 
Sbjct: 915  HNVVIKGLCSARKLDSALELFKEMEESGS--CPPDVFTYSTIVDSLVKSGKVDDACRLVE 972

Query: 197  DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
            D++ K                     G  P + + +  L  L  + ++D A    + M R
Sbjct: 973  DMVSK---------------------GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 1011

Query: 257  NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            +  SPN+ T N ++   CKLG I+ A  + + M   G  P+V TY  L+   C  G    
Sbjct: 1012 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 1071

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A+    +M + G  PN+ T+N+L+  FCKK ++  A ++ S M      PNVV+YNT+I 
Sbjct: 1072 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIA 1131

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            G  +      G  L E+ML N    DI+T+N +I  +CK  +   A  L   + ++   P
Sbjct: 1132 GLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 1191

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIR-SGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            N  TY++L+ G C  +  ++A  L + M R  GC P+   +  ++   C+++  DRA ++
Sbjct: 1192 NLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKL 1251

Query: 496  LLEMLEKCMAPDSIILSELYSGL 518
             L+ML   +APD +  S + S L
Sbjct: 1252 FLQMLSDGLAPDDVTYSIVISSL 1274



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 192/420 (45%), Gaps = 44/420 (10%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP---LVFDLLFKTYAHRKKFRNATDTF 216
           +SILRG+ D+       +  D++L+   M  + P   + ++ +    +   +  +A    
Sbjct: 200 KSILRGLCDA------GQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLL 253

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M D GF P + S N  L     + RV+ AL   ++M      P+V +   V++  CKL
Sbjct: 254 EEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKL 313

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++ A  V   M   G  P+V TY TL+ G C  G L  A++    M + G +PN IT+
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 373

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N ++  FC++  +  A+++   M  T   P+ + Y+T+I+G+ + G       L E+M+R
Sbjct: 374 NNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433

Query: 397 NGIK-----------------------------------VDILTYNALILGLCKEGKTKK 421
            G +                                    D++ Y+ LI  LCK  +  +
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   +  + KN   P+  TY++++ G C  +    AF L+  M  +G  P+   + +++ 
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +FC++ + D A ++L  M E    PD +  S L +GL   G  + A  +F++M   G  P
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAP 613



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 213/457 (46%), Gaps = 21/457 (4%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
            L+P  V  VL ++  D   +L FF W +T       +   + +L++L K  ++  +  +
Sbjct: 90  QLSPEIVGKVLQRL-IDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDL 148

Query: 163 LR----GILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL----FKTYA--HRKKFRNA 212
            R    G    D+    S L    + + ++  +  L FD +     K +A  H+   R  
Sbjct: 149 FRSRIEGQWGGDTVTY-STLISGFIRAGKILPAYEL-FDEMNRKGLKAHAGVHKSILRGL 206

Query: 213 TDTF-CQMRDYGFLPIIESC-------NKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
            D   C      F  + ++C       N  ++ L  S+R+D A+   +EM  N  +PNV+
Sbjct: 207 CDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVF 266

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           + N V+H FCK   +E A+ + + M + G  P V +Y T+I+G C    +  A +  + M
Sbjct: 267 SYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKM 326

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G QPNVIT+ TL+ GFC+ G L  A  +  +M      PN +TYN +++ + +  + 
Sbjct: 327 IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDM 386

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E    + + M++ G   D + Y+ +I G CK GK ++A  L++ + +    P+ +  S L
Sbjct: 387 ERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTL 446

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I   C     + A +L +  I   C P+   + +L+   C+ +    A   L  M++   
Sbjct: 447 IDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRC 506

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            PD +  + +  GL    +   A  LF +M   G++P
Sbjct: 507 YPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMP 543



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 170/350 (48%), Gaps = 42/350 (12%)

Query: 230  SCNKFLSSLLDSERVDIALGFYKEMRRNRI--SPNVYTLNMVMHAFCKLGII-------- 279
            +CN  L +LL  +R   AL  Y    RN++  SPN++T  +++H  C+ G I        
Sbjct: 846  TCNCLLQALLRLKRPKDALQVY----RNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLK 901

Query: 280  ---------------------------ERAVEVFKNMESMGFI-PSVTTYNTLISGHCNK 311
                                       + A+E+FK ME  G   P V TY+T++      
Sbjct: 902  EMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKS 961

Query: 312  GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
            G +  A +    M   G  PNV+T+++L+ G CK GKL EA  +   M  +  SPN+VTY
Sbjct: 962  GKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTY 1021

Query: 372  NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            NT+I+G+ ++G  +    L EEM+  G + +++TY  L+   CK GK + A  LV+ + +
Sbjct: 1022 NTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE 1081

Query: 432  NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               VPN  TY++L+   C +   ERA QL  SMI+ GC PN   +  +++  C+      
Sbjct: 1082 KGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHE 1141

Query: 492  AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +L +ML     PD +  + +   +    + ++A +LF  ++  G  P
Sbjct: 1142 GVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 1191



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 177/384 (46%), Gaps = 2/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+   D  D   ++ D ++   R C  + + +  L   +        A +   
Sbjct: 302 SYTTVINGLCKLDQVDEACRVMDKMIQ--RGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G+ P   + N  +        ++ A    + M +    P+    + ++  FCK G
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A ++ + M   G  P V   +TLI   C    +  A +   +       P+V+ ++
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYS 479

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +L EA      M      P+VVTYN++++G  +         L++ M   
Sbjct: 480 ILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAA 539

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  D++TY+ +I   CK+     A  +++ + +   VP+  TYSALI G C     ++A
Sbjct: 540 GVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKA 599

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F +++ M+  GC PN   +  L+   C+    ++AAE+L  M ++   PDSI  + L +G
Sbjct: 600 FDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLING 659

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L +  + E A ++ R+M+ +G LP
Sbjct: 660 LCNASRLEEAWRVLREMKDKGCLP 683



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 162/344 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + ++ +   +  R     A      M   G  P   + +  +S    + ++  A    
Sbjct: 369 NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLL 428

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           ++M R    P+V  L+ ++ A CK   I+ A E+ +    M   P V  Y+ LI   C  
Sbjct: 429 EQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKA 488

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             L  A  + ++M KN   P+V+T+N+++ G CK  ++++A  +F  M+A  V P+VVTY
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + +I+ + +  N +    + E M       D++TY+ALI GLCK G   KA  + +++  
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLG 608

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               PN  TY+ LI G C     E+A ++ + M +  C P+   +  L++  C     + 
Sbjct: 609 CGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEE 668

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           A  VL EM +K   PD +    L   L      EL  +L ++ME
Sbjct: 669 AWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEME 712



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 177/376 (47%), Gaps = 24/376 (6%)

Query: 195  VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            + D + KTY    +   A + F  +++ G  P + + N  +  L  S R D A    +EM
Sbjct: 1164 IIDAMCKTY----RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219

Query: 255  -RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
             R+   SP++ T N V+   CK   ++RA ++F  M S G  P   TY+ +IS  C    
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  A     LM KNG  P  IT+ TLI GFCK G L +A  I   + +    P+VVT++ 
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             I+   + G       L E MLR G+  D +TYN L+ G C    T+ A  L + + +  
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 434  LVPNASTYSALITGQCVRKNSERAF--QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              P+ +TY+ L+ G  V K S +    ++ KSM+ +G + N  +   L ++     D  R
Sbjct: 1400 CEPDNATYTTLV-GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADV-R 1457

Query: 492  AAEVLLEMLEKCMAPD------------SIILSELYSGLHHCGK-DELAMKLFRKMEIRG 538
                +++M  KC +P             +++L     G++   K +E A  L+R M + G
Sbjct: 1458 LGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEG 1517

Query: 539  LLPKG--FDKLRTINC 552
            + P    F  L T+ C
Sbjct: 1518 VEPDAVTFLSLLTMCC 1533



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 157/301 (52%), Gaps = 8/301 (2%)

Query: 245  DIALGFYK-EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            D ALGF+     +   + + YT N ++ A  +L   + A++V++N   +   P++ T+  
Sbjct: 825  DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYRN--KLCCSPNMFTFTI 882

Query: 304  LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT- 362
            LI G C  G +  A +    M ++G+  NVI  N +I G C   KL  A  +F EM+ + 
Sbjct: 883  LIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESG 942

Query: 363  NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            +  P+V TY+T+++   + G  +    L E+M+  G   +++TY++L+ GLCK GK  +A
Sbjct: 943  SCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 1002

Query: 423  AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              L++ + ++   PN  TY+ +I G C     + A+ L + M+  GC+PN   + +L+  
Sbjct: 1003 TALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDA 1062

Query: 483  FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
            FC+    + A  ++  M+EK   P+    + L      C KDE+  A +L   M  +G +
Sbjct: 1063 FCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD--MFCKKDEVERACQLLSSMIQKGCV 1120

Query: 541  P 541
            P
Sbjct: 1121 P 1121



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + + +L       K+   A      M      P + + N  +  L  S R++ A 
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  MR   + P+V T ++V+H+FCK   ++ A ++ + M+    +P V TY+ LI+G 
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A      M   G  PN++T+NTLI G CK  K+ +A  +   M+  + +P+ 
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TY  LING       E    +  EM   G   D +TY  L+  L K    +    L+K+
Sbjct: 651 ITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKE 710

Query: 429 LD 430
           ++
Sbjct: 711 ME 712



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 39/390 (10%)

Query: 122  LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
            ++ E F  +Q     +  L T++ ++H L K+R+F  +E +LR +               
Sbjct: 1176 IAYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG---------- 1224

Query: 182  ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
                   C    + ++ +       K+   A   F QM   G  P   + +  +SSL   
Sbjct: 1225 -------CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277

Query: 242  ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
              +D A    + M +N   P   T   ++  FCK G +++A+E+ + + S G  P V T+
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337

Query: 302  NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            +  I     +G L  A +    M + G+ P+ +T+NTL+ GFC      +A  +F  M+ 
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQ 1397

Query: 362  TNVSPNVVTYNTLING-YGQVGNSEMGASLYEEMLRNGIKV----------------DIL 404
                P+  TY TL+     +    ++ A + + M+  G K+                D+ 
Sbjct: 1398 CGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVR 1457

Query: 405  TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
               A++    K G  + A  + + +D+ ++V     +SA++      K  E+AF L++ M
Sbjct: 1458 LGCAIVDMFGKCGSPQDARKVFEGMDQRNVV----LWSAMLGVYVFHKQEEQAFGLWRVM 1513

Query: 465  IRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               G  P+   F  L++  C     D A +
Sbjct: 1514 GLEGVEPDAVTFLSLLTMCCHAGLLDAAVD 1543



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 101/219 (46%), Gaps = 5/219 (2%)

Query: 147 LHILTKNRKFK---SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
           L ++ KNR +    +  S++ G+  S   +    LFD +  +  M D   + + ++  ++
Sbjct: 498 LDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDV--VTYSIVIHSF 555

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
                  +A     +M++   +P + + +  ++ L  +  VD A   ++EM     +PN+
Sbjct: 556 CKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNL 615

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T N ++   CK+  +E+A E+ + M      P   TY  LI+G CN   L  A +    
Sbjct: 616 VTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLRE 675

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           M+  G  P+ +T+ TL+    K   L    ++  EM+AT
Sbjct: 676 MKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEAT 714



 Score = 45.4 bits (106), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 57/114 (50%), Gaps = 4/114 (3%)

Query: 280  ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM-KFKNLMEKNGIQPNVITFNT 338
            E+A  +++ M   G  P   T+ +L++  C+ GLL  A+ +F ++    G++P V  F+ 
Sbjct: 1504 EQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSC 1563

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
            +I    + G ++EA  +   M      P+  T+N L++ Y   G+ E    + E
Sbjct: 1564 VIDLLGRLGLVNEAEDLMLGMPC---KPSAATWNCLLSAYKICGDFERALRVAE 1614


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 172/323 (53%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + S +  ++       +   L   +EM+   + PN+YT N ++   CK G 
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A  V + M + G +P    Y TLI G C  G +  A K  + MEK  I P+ I +  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I G C+ GK+ EA+++F++M +  V P+ VTY TLI+GY + G  E   SL+ +M+++G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  +++TY AL  GLCK G+   A  L+ ++    L  N  TY++L+ G C   N  +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L + M  +G  P+   F  LM  +C+  +  +A E+L EML++ + P  I  + L +G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G  E   +L   M  +G++P
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMP 323



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 173/326 (53%), Gaps = 4/326 (1%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M+  G  P + + N  +  L  S +VD A    +EM    I P+      ++  FCKLG
Sbjct: 35  EMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLG 94

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I+ A ++F  ME    +P    Y  +I G C  G +  A K  N M   G++P+ +T+ 
Sbjct: 95  NIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYT 154

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G+CK G++ +A  + ++M  + ++PNVVTY  L +G  ++G  +    L  EM   
Sbjct: 155 TLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGK 214

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++++I TYN+L+ GLCK G  ++A  L+++++   + P+  T++ L+   C      +A
Sbjct: 215 GLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKA 274

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L + M+  G +P    F +LM+ FC +   +    +L  MLEK + P++   + L   
Sbjct: 275 HELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMK- 333

Query: 518 LHHCGKDEL--AMKLFRKMEIRGLLP 541
             +C ++ +    ++++ M  RG++P
Sbjct: 334 -QYCIRNNMRCTTEIYKGMCARGVMP 358



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 151/338 (44%), Gaps = 5/338 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A     +M + G +P        +        +  A   + EM + RI P+     
Sbjct: 60  KVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYT 119

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            V+   C+ G +  A +VF  M S G  P   TY TLI G+C  G +  A    N M ++
Sbjct: 120 AVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS 179

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ PNV+T+  L  G CK G++  AN +  EM    +  N+ TYN+L+NG  + GN    
Sbjct: 180 GLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L EEM   G+  D +T+  L+   CK G+  KA  L++++    L P   T++ L+ G
Sbjct: 240 VKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNG 299

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C+    E   +L   M+  G  PN   +  LM  +C   +     E+   M  + + PD
Sbjct: 300 FCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPD 359

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           S   + L  G  HC    +    F   E   +  KGF+
Sbjct: 360 SNTYNILIKG--HCKARNMKEAWFLHKE---MAEKGFN 392



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 188/415 (45%), Gaps = 31/415 (7%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDS-------------DSF------DLPSKLFD 180
           L T++ ++ +L K+ K   +E +LR +++              D F          KLFD
Sbjct: 45  LYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFD 104

Query: 181 SILYSYRMCDSSPLVFDLLFKT-----YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
            +       +   +V D +  T          K   A   F +M   G  P   +    +
Sbjct: 105 EM-------EKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI 157

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
                S  ++ A   + +M ++ ++PNV T   +    CKLG ++ A E+   M   G  
Sbjct: 158 DGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQ 217

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
            ++ TYN+L++G C  G +  A+K    ME  G+ P+ ITF TL+  +CK G++ +A+ +
Sbjct: 218 LNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHEL 277

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EM    + P V+T+N L+NG+   G  E G  L   ML  GI  +  TYN+L+   C 
Sbjct: 278 LREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCI 337

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
               +    + K +    ++P+++TY+ LI G C  +N + A+ L+K M   G       
Sbjct: 338 RNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASS 397

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           +  ++  F + +    A E+  EM  + MA D+ I +      +  G  E A++L
Sbjct: 398 YNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 156/348 (44%), Gaps = 2/348 (0%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +  +++ G+          K+F+ +    R  +   + +  L   Y    +   A   
Sbjct: 115 FIAYTAVICGLCRCGKMMEADKVFNKMFS--RGVEPDEVTYTTLIDGYCKSGEMEKAFSL 172

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             QM   G  P + +       L    +VD A     EM    +  N+ T N +++  CK
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G I +AV++ + ME  G  P   T+ TL+  +C  G +  A +    M   G+QP VIT
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           FN L+ GFC  G L +  R+ + M    + PN  TYN+L+  Y    N      +Y+ M 
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+  D  TYN LI G CK    K+A +L K++ +      AS+Y+++I G   +K   
Sbjct: 353 ARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKIS 412

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
            A +L++ M R G   +  I+ + +       + + A E+  E +E C
Sbjct: 413 EARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIENC 460



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 82/159 (51%)

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ +I G C  G+ +K   L++++    L PN  TY+++I   C     + A ++ 
Sbjct: 9   DVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVL 68

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + MI  G  P+  ++  L+  FC+  +   A ++  EM ++ + PD I  + +  GL  C
Sbjct: 69  REMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           GK   A K+F KM  RG+ P        I+   ++GE E
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEME 167


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 178/352 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F+ L K         +A +   +M+D GF+P   + +        +E+ + ALG
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            Y+    + +  N YT +++++A CK G IE+A E+     + G +P+   YNT+I G+C
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            KG L  A      MEK G++P+ + +N LI  FC+ G++  A +  ++MK   VSP+V 
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN LI GYG+    +    + +EM  NG   ++++Y  LI  LCK  K  +A  + +D+
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           +   + P    Y+ LI G C +   E AF+  K M++ G   N   +  L+         
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A ++LLE+  K + PD    + L SG    G  +  + L+ +M+  G+ P
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 4/367 (1%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           Y   DS  L+ D L KT    K+FR   + F  + +  F P      K + + +    V 
Sbjct: 141 YPSSDSLTLLLDHLVKT----KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
             L  +  M+ +RI P+V+  N+++   CK   +  A ++F  M +   +PS+ TYNTLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C  G    + K +  M+ + I+P++ITFNTL+ G  K G + +A  +  EMK     
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+  T++ L +GY     +E    +YE  + +G+K++  T + L+  LCKEGK +KA  +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +       LVPN   Y+ +I G C + +   A    ++M + G +P+   +  L+  FC+
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
             + + A + + +M  K ++P     + L  G     + +    + ++ME  G +P    
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496

Query: 546 KLRTINC 552
               INC
Sbjct: 497 YGTLINC 503



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 173/350 (49%), Gaps = 10/350 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++ L + +    +  NA     +M+  G  P +E+ N  +         D      KE
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N   PNV +   +++  CK   +  A  V ++ME  G  P V  YN LI G C+KG 
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +F   M K GI+ N++T+NTLI G    GKL EA  +  E+    + P+V TYN+
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKN 432
           LI+GYG  GN +   +LYEEM R+GIK  + TY+ L++ LC    TK+   L + L  + 
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLC----TKEGIELTERLFGEM 659

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           SL P+   Y+ ++    V  + E+AF L K MI      +K  +  L+    +       
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCG-KDEL-AMKLFRKMEIRGLL 540
             ++ EM  + M P++   + +  G  HC  KD + A   +R+M+ +G L
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKG--HCEVKDYMSAYVWYREMQEKGFL 767



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 146/285 (51%), Gaps = 12/285 (4%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + P+    N ++  FC+LG +E A +    M+  G  PSV TYN LI G+  K  
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                     ME NG  PNV+++ TLI   CK  KL EA  +  +M+   VSP V  YN 
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G    G  E      +EML+ GI+++++TYN LI GL   GK  +A  L+ ++ +  
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY++LI+G     N +R   LY+ M RSG +P    + +L+S  C  E  +   
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTE 653

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC----GKDELAMKLFRKM 534
            +  EM    + PD ++    Y+G+ HC    G  E A  L ++M
Sbjct: 654 RLFGEM---SLKPDLLV----YNGVLHCYAVHGDMEKAFNLQKQM 691



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 190/402 (47%), Gaps = 48/402 (11%)

Query: 147 LHILTKNRKFKSSESILRGILDSDS--FDLPSKLFDSILYSYRMC--DSSPLVFDLLFKT 202
           L +L +  + +++  +L  +L SDS  F  P +LF +   S      D S L+  +L   
Sbjct: 62  LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN- 120

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
               K    A D F  +R+ G  P  +S    L  L+ +++  + +  +  +  +   P+
Sbjct: 121 --ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +     + A  KL  + + +E+F                                   N
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELF-----------------------------------N 203

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+ + I P+V  +N LI G CK  ++++A ++F EM A  + P+++TYNTLI+GY + G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N E    + E M  + I+  ++T+N L+ GL K G  + A  ++K++     VP+A T+S
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L  G    + +E A  +Y++ + SG + N +   +L++  C+    ++A E+L   + K
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383

Query: 503 CMAPDSIILSELYSGLHHCGKDELA---MKLFRKMEIRGLLP 541
            + P+ +I + +  G  +C K +L    MK+   ME +G+ P
Sbjct: 384 GLVPNEVIYNTMIDG--YCRKGDLVGARMKI-EAMEKQGMKP 422



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 198/425 (46%), Gaps = 26/425 (6%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF--DSILYSYRMCD-- 190
           PSS +L   +++L  L K ++F+ + ++   IL+SD    PSK     +I  + ++ D  
Sbjct: 142 PSSDSL---TLLLDHLVKTKQFRVTINVFLNILESDF--RPSKFMYGKAIQAAVKLSDVG 196

Query: 191 ---------------SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
                           S  ++++L       K+  +A   F +M     LP + + N  +
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
                +   + +    + M+ + I P++ T N ++    K G++E A  V K M+ +GF+
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   T++ L  G+ +      A+        +G++ N  T + L+   CK+GK+ +A  I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL-YEEMLRNGIKVDILTYNALILGLC 414
                A  + PN V YNT+I+GY + G+  +GA +  E M + G+K D L YN LI   C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + G+ + A   V  +    + P+  TY+ LI G   +   ++ F + K M  +G  PN  
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L++  C+      A  V  +M ++ ++P   I + L  G    GK E A +  ++M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555

Query: 535 EIRGL 539
             +G+
Sbjct: 556 LKKGI 560



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 182/407 (44%), Gaps = 32/407 (7%)

Query: 142 THSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           T SI+L+ L K  K + +E IL     +G++ ++                       +++
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNE-----------------------VIY 392

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + +   Y  +     A      M   G  P   + N  +    +   ++ A     +M+ 
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             +SP+V T N+++  + +    ++  ++ K ME  G +P+V +Y TLI+  C    L  
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A   K  ME  G+ P V  +N LI G C KGK+ +A R   EM    +  N+VTYNTLI+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G    G       L  E+ R G+K D+ TYN+LI G    G  ++   L +++ ++ + P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
              TY  LI+  C ++  E   +L+  M     +P+  ++  ++  +  + D ++A  + 
Sbjct: 633 TLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            +M+EK +  D    + L  G    GK      L  +M  R + P+ 
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L    +   K   A D   ++   G  P + + N  +S    +  V   +  Y+E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+R+ I P + T ++++    K GI E    +F     M   P +  YN ++  +   G 
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A   +  M +  I  +  T+N+LI G  K GKL E   +  EM A  + P   TYN 
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ G+ +V +       Y EM   G  +D+   N L+ GL +E ++K+A  ++ +++   
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800

Query: 434 L 434
           L
Sbjct: 801 L 801



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/324 (21%), Positives = 126/324 (38%), Gaps = 68/324 (20%)

Query: 192 SPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP V  +++L   Y  + +F    D   +M D G +P + S    ++ L    ++  A  
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             ++M    +SP V   NM++   C  G IE A    K M   G   ++ TYNTLI G  
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS---- 365
             G LS A      + + G++P+V T+N+LI G+   G +     ++ EMK + +     
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635

Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                                      P+++ YN +++ Y   G+ E   +L ++M+   
Sbjct: 636 TYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695

Query: 399 IKVDILTYNALI-----------------------------------LGLCKEGKTKKAA 423
           I +D  TYN+LI                                    G C+      A 
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755

Query: 424 YLVKDLDKNSLVPNASTYSALITG 447
              +++ +   + +    + L++G
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVSG 779



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/196 (19%), Positives = 80/196 (40%)

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA  +F  ++   + P+  +   L++   +     +  +++  +L +  +     Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
            I    K     K   L   +  + + P+   Y+ LI G C  K    A QL+  M+   
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   +  L+  +C+  + +++ +V   M    + P  I  + L  GL   G  E A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 529 KLFRKMEIRGLLPKGF 544
            + ++M+  G +P  F
Sbjct: 305 NVLKEMKDLGFVPDAF 320


>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 566

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 183/351 (52%), Gaps = 14/351 (3%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVM 270
           A+   C +  Y +       NK +   +   RV  A+  ++   +  + SP+V++ N+V+
Sbjct: 189 ASQFGCSIEAYAY-------NKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVI 241

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
              CK+G +++A+E+ + M+  G  P   T+N L++G C    +S   +    ++++G+ 
Sbjct: 242 KGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVC 301

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PNV+T+ ++I G+CK G++ +A  ++++M A   SPNVVTYN LINGYG+ GN     +
Sbjct: 302 MPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVA 361

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y++M+      D++T+++LI G C+ G+   A  +  ++ +  + PNA T+  +I   C
Sbjct: 362 VYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFC 421

Query: 450 VRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +  S  A    K M +R+   P   I+  ++   C+    D A  +L+EM EK   PD 
Sbjct: 422 KQNRSGEALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDK 481

Query: 509 IILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
              + L  G  HC K  +  A+  F KM   G  P        I+C  ++G
Sbjct: 482 YTYTILIIG--HCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSG 530



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 128/275 (46%), Gaps = 5/275 (1%)

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGI 329
           HA C    +     +      +   PS  +Y  +IS  C  G  + A++ F  + +++G 
Sbjct: 100 HAPCASSTLHLFSALHSPHSQLAMPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGY 159

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIF-SEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
            PN   F + + G C    L +A     S+      S     YN L++ +   G  +   
Sbjct: 160 FPNA-RFLSFLSGSCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAV 218

Query: 389 SLYEEMLRNGI-KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           +L+E  ++ G+   D+ ++N +I G+CK G  +KA  LV+ +D+    P+  T++ L+ G
Sbjct: 219 ALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNG 278

Query: 448 QCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
            C  K   +  ++ + + R G C PN   +  ++S +C+    + A  V  +M+    +P
Sbjct: 279 LCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSP 338

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  + L +G    G    A+ ++++M +R  LP
Sbjct: 339 NVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLP 373



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 1/171 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + F  L   Y    +  +A   + +M  Y   P   +    + +     R   
Sbjct: 369 RRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGE 428

Query: 247 ALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           AL F K+M  R  I+P  +  N V+   CK G ++ A  +   ME  G  P   TY  LI
Sbjct: 429 ALHFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILI 488

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            GHC KG ++ A+ F + M + G  P+ I  N+ I    K G   E + I 
Sbjct: 489 IGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGEVDHIM 539


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  184 bits (468), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 185/368 (50%), Gaps = 20/368 (5%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A    C+M   GF+P   + +K +  L D+ +V+ A   ++EM+RN I P+VYT  
Sbjct: 440 KFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYT 499

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK G+I++A + F  M   G  P+V TY  LI  +     + +A +   +M   
Sbjct: 500 ILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE 559

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS----------------PNVVTY 371
           G +PNV+T+  LI G CK G++ +A +I++ M+    S                PNV+TY
Sbjct: 560 GCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITY 619

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L++G  +    +    L + ML +G + + + Y+A+I G CK GK + A  +   + +
Sbjct: 620 GALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679

Query: 432 NSLVPNASTYSALITGQCVRKNS--ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               PN  TYS+ I   C+ K++  +   ++   M+ + C PN  I+  ++   C+    
Sbjct: 680 RGYSPNLYTYSSFI--DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKT 737

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
           D A +++L+M EK   P+ +  + +  G    GK E  ++LFR M  +G  P        
Sbjct: 738 DEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVL 797

Query: 550 INCAPENG 557
           IN    NG
Sbjct: 798 INHCCSNG 805



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 179/404 (44%), Gaps = 57/404 (14%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER------VDIAL 248
           +F+ L   Y   + +  A   F +M   G  P     N F+ S+  +E       +D+  
Sbjct: 351 IFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVE 410

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             Y EM    +  N   ++      C  G  ++A ++   M   GF+P  +TY+ +I   
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+   +  A      M++NGI P+V T+  LI  FCK G + +A + F EM     +PNV
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV-- 426
           VTY  LI+ Y +     +   L+E ML  G K +++TY ALI G CK G+ +KA  +   
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590

Query: 427 -------KDLDK-------NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
                   D+DK       N   PN  TY AL+ G C     + A +L  +M+  GC PN
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650

Query: 473 KHIFEMLMSTFCQ-------NEDFDRAAE----------------------------VLL 497
           + +++ ++  FC+        E F + +E                            VL 
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS 710

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +MLE    P+ +I +E+  GL   GK + A KL  KME +G  P
Sbjct: 711 KMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNP 754



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 156/326 (47%), Gaps = 20/326 (6%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   + +L  ++      + A   F +M   G  P + +    + + L ++++ +A   +
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI---------------- 295
           + M      PNV T   ++   CK G IE+A +++  M   G I                
Sbjct: 554 EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMR--GDIESSDMDKYFKLDHNNC 611

Query: 296 --PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V TY  L+ G C    +  A +  + M  +G +PN I ++ +I GFCK GKL +A 
Sbjct: 612 EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F++M     SPN+ TY++ I+   +    ++   +  +ML N    +++ Y  ++ GL
Sbjct: 672 EVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGL 731

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK GKT +A  L+  +++    PN  TY+A+I G       E+  +L++ M   GC PN 
Sbjct: 732 CKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNF 791

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEM 499
             + +L++  C N   D A ++L EM
Sbjct: 792 ITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 177/422 (41%), Gaps = 59/422 (13%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAH-----------RKKFRN-----ATDTFCQMR 220
           KL D +  +    D  PL F +  K   H           RK  RN     A +   +++
Sbjct: 144 KLLDLLGCNVNADDRVPLKFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLK 203

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D+G+ P   + N  +   L ++++D A    +EM       + YTL+   ++ CK G   
Sbjct: 204 DFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCR 263

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++    E   F+P    YN ++SG C   L   AM   + M  +   PNV+T+  L+
Sbjct: 264 EAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILL 321

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  +KG+L    RI S M      PN   +N+LI+ Y +  +      L+++M++ G +
Sbjct: 322 SGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQ 381

Query: 401 VDILTYNALI---------------------------LG--------------LCKEGKT 419
              L YN  I                           LG              LC  GK 
Sbjct: 382 PGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKF 441

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  ++ ++     VP+ STYS +I   C     E+AF L++ M R+G  P+ + + +L
Sbjct: 442 DQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTIL 501

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           + +FC+     +A +   EML K   P+ +  + L        +  +A +LF  M + G 
Sbjct: 502 IDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGC 561

Query: 540 LP 541
            P
Sbjct: 562 KP 563



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 159/338 (47%), Gaps = 8/338 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  ++      +L D++L     C+ + +V+D +   +    K ++A + F +M 
Sbjct: 621 ALVDGLCKANRVKEAHELLDTMLA--HGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMS 678

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G+ P + + + F+  L    R+D+ L    +M  N  +PNV     ++   CK+G  +
Sbjct: 679 ERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTD 738

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++   ME  G  P+V TY  +I G    G +   ++    M   G  PN IT+  LI
Sbjct: 739 EAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLI 798

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GI 399
              C  G L EA ++  EMK T    +++++  +I G+ Q   + +G  L +E+  N  +
Sbjct: 799 NHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIG--LLDELSENESV 856

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDK--NSLVPNASTYSALITGQCVRKNSERA 457
            VD L Y  LI    K G+ + A  L++++    +  V N   Y++LI         ++A
Sbjct: 857 PVDSL-YRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKA 915

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +LY SMI     P   I   L+    + + +  A ++
Sbjct: 916 LELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQL 953



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 149/356 (41%), Gaps = 38/356 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +  L  + RV  A      M  +   PN    + V+  FCK+G ++ A EV
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEV 673

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G+ P++ TY++ I        L L +K  + M +N   PNV+ +  ++ G CK
Sbjct: 674 FTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCK 733

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK  EA ++  +M+    +PNVVTY  +I+G+G+ G  E    L+ +M   G   + +T
Sbjct: 734 IGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 406 YNALILGLCKEG---------KTKKAAY------------------------LVKDLDKN 432
           Y  LI   C  G            K  Y                        L+ +L +N
Sbjct: 794 YRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSEN 853

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP--NKHIFEMLMSTFCQNEDFD 490
             VP  S Y  LI         E A  L + +  S      NK+++  L+         D
Sbjct: 854 ESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVD 913

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL---FRKMEIRGLLPKG 543
           +A E+   M+ K + P+  IL  L  GL    K + A++L     +M+I  L  K 
Sbjct: 914 KALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIHWLQEKA 969


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 186/362 (51%), Gaps = 1/362 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++ ++    KKF N  D F +M   GF P      + + + +    + +A+  ++ M+R 
Sbjct: 36  MIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRR 95

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           ++ PNV+  N+++   CK   I  A ++F  M     +P+  T+NTLI G+C  G + +A
Sbjct: 96  KVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVA 155

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +  +  M+K  ++P++ITFN+L+ G CK  ++ EA  + +E+K     P+  TY+ + +G
Sbjct: 156 IGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDG 215

Query: 378 YGQVGNSEMGA-SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
             +  +    A  LY E +  G+K+D  T + L+ GLCKEGK +KA  ++K L ++ LVP
Sbjct: 216 LLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVP 275

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
               Y+ ++ G C   + +RA    + M   G RPN   F  ++  FC+ +  D+A E +
Sbjct: 276 GEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWV 335

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPEN 556
            +M+ K +AP     + L  G           ++  +ME  G  P        INC  ++
Sbjct: 336 KKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKD 395

Query: 557 GE 558
           G+
Sbjct: 396 GK 397



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 203/431 (47%), Gaps = 32/431 (7%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGI----LDSDSFDLPSKLFDSILYS---- 185
           +PS +T  +   +L  L K R+ + +  +L  I       D F   S +FD +L S    
Sbjct: 168 EPSIITFNS---LLSGLCKARRIEEARCMLNEIKCNGFVPDGFTY-SIIFDGLLKSDDGA 223

Query: 186 ------YRMCDSSPLVFD-----LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
                 YR      +  D     +L        K   A +    + ++G +P     N  
Sbjct: 224 GAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           ++       +D A+   ++M    + PN    N V+  FC++ +I++A E  K M   G 
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI 343

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            PSV TYN LI G+    + S   +    ME+NG +PNVI++ +LI   CK GK+ EA  
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  +M    V PN   YN LI+G   VG        ++EM +NGI   I+TYN+LI GLC
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K GK K+A  +   +      P+  TY++LI+G     NS++  +LY++M + G +P  +
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC----GKDELAMKL 530
            F  L+S  C  E       +  EML+  ++PD ++    Y+ + HC    G  + A  L
Sbjct: 524 TFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVV----YNAMIHCYQETGHVQKAFSL 578

Query: 531 FRKMEIRGLLP 541
            ++M   G+ P
Sbjct: 579 QKEMVDMGVRP 589



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 129/463 (27%), Positives = 202/463 (43%), Gaps = 64/463 (13%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSYRMCDSSPLVFDLLF 200
           T SI+L+ L K  K + +E +L+ +++     +P + ++++I+  Y  C    +   +L 
Sbjct: 244 TCSILLNGLCKEGKVEKAEEVLKSLVEHGL--VPGEVIYNTIVNGY--CQIGDMDRAILT 299

Query: 201 KTYAHRKKFR-------NATDTFCQMR-------------DYGFLPIIESCNKFLSSLLD 240
                 +  R       +  D FC+M+               G  P +E+ N  +     
Sbjct: 300 IEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGR 359

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
                      +EM  N   PNV +   +++  CK G I  A  V ++M   G +P+   
Sbjct: 360 LCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANI 419

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN LI G C  G L  A++F + M KNGI   ++T+N+LI G CK GKL EA  +F  + 
Sbjct: 420 YNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLIT 479

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG--- 417
           +T   P+V+TYN+LI+GY   GNS+    LYE M + G+K  I T++ LI G  KEG   
Sbjct: 480 STGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKL 539

Query: 418 -------------------------------KTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                                            +KA  L K++    + P+  TY++LI 
Sbjct: 540 KETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLIL 599

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G            L   M   G  P    + +L+   C  +DF+ A     EMLE    P
Sbjct: 600 GHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLP 659

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
           +  I +EL +GL   G+ + A  +  +M     +  G D L T
Sbjct: 660 NVCICNELSTGLRKDGRLQEAQSICSEM-----IANGMDNLDT 697



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 153/293 (52%), Gaps = 1/293 (0%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            Y  MR+    P+   + M++ +  +    +  +++FK M  +GF P    Y   +    
Sbjct: 18  LYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAMLAAV 77

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L LAM+    M++  + PNV  +N LI G CK+ ++ +A ++F EM   N+ PN V
Sbjct: 78  KLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRV 137

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NTLI+GY + G  ++   L E M +  ++  I+T+N+L+ GLCK  + ++A  ++ ++
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 430 DKNSLVPNASTYSALITGQCVRKN-SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             N  VP+  TYS +  G     + +  A  LY+  I  G + + +   +L++  C+   
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++A EVL  ++E  + P  +I + + +G    G  + A+    +ME RGL P
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 169/347 (48%), Gaps = 3/347 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+++L       K+ R+A   F +M     +P   + N  +     +  VD+A+G  + M
Sbjct: 103 VYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERM 162

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG--HCNKG 312
           ++ ++ P++ T N ++   CK   IE A  +   ++  GF+P   TY+ +  G    + G
Sbjct: 163 KKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDG 222

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             +    ++  + K G++ +  T + L+ G CK+GK+ +A  +   +    + P  V YN
Sbjct: 223 AGAALDLYREAIGK-GVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYN 281

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T++NGY Q+G+ +      E+M   G++ + + +N++I   C+     KA   VK +   
Sbjct: 282 TIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGK 341

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + P+  TY+ LI G        R FQ+ + M  +G +PN   +  L++  C++     A
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA 401

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             VL +M+ + + P++ I + L  G    GK   A++ F +M   G+
Sbjct: 402 EMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGI 448


>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
 gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
 gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
          Length = 583

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 18/346 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVM 270
           A++  C++  Y +       NK +SSL+   RV   +  ++   ++R+ SP+V++ N+V+
Sbjct: 206 ASEFGCRVEAYAY-------NKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVI 258

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
              C++G +++A+E+ + M   G  P   T+N L+ G C    +S   +    ++++G+ 
Sbjct: 259 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVC 318

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PNV+TF ++I G+CK GKL +A  ++++M A+ + PN VTYN LINGYG+VG+      
Sbjct: 319 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 378

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y++M R     D++T+++LI G C+ G+   A  +  D+ ++ + PN  T+S +I   C
Sbjct: 379 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 438

Query: 450 VRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +  S+ A  L   + +R    P   I+  ++   C+    D A  +   M EK   PD 
Sbjct: 439 KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 498

Query: 509 IILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINC 552
              + L  G  +C K  +  A+  F +M   G  P       T+NC
Sbjct: 499 YTYTILIIG--YCMKSRISEAIMFFHEMVEAGCSPDSI----TVNC 538



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           RD   +P + +    +S    + +++ A+  Y +M  + I PN  T N++++ + K+G +
Sbjct: 314 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 373

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             AVEV++ M  +   P V T+++LI G+C  G L  A++  + M ++ IQPNV TF+ +
Sbjct: 374 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 433

Query: 340 IFGFCKK------------------------------------GKLHEANRIFSEMKATN 363
           I   CK+                                    GK+ EAN I   M+   
Sbjct: 434 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 493

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+  TY  LI GY            + EM+  G   D +T N  I  L K G   +  
Sbjct: 494 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD 553

Query: 424 YLVK 427
           ++++
Sbjct: 554 HVMR 557



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 25/263 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPL------ 194
           TH+I++  L +  +      +LR  L  D   +P+ + F S++  Y  C +  L      
Sbjct: 288 THNILVDGLCRTNEVSRGHEVLRR-LQRDGVCMPNVVTFTSVISGY--CKAGKLEDAMAV 344

Query: 195 --------------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                          +++L   Y       +A + + QM      P + + +  +     
Sbjct: 345 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 404

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-PSVT 299
             ++D AL  + +M ++RI PNVYT ++++H+ CK    + A+ +   +     I P   
Sbjct: 405 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAF 464

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +I   C  G +  A   +  ME+ G +P+  T+  LI G+C K ++ EA   F EM
Sbjct: 465 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 524

Query: 360 KATNVSPNVVTYNTLINGYGQVG 382
                SP+ +T N  I+   + G
Sbjct: 525 VEAGCSPDSITVNCFISCLLKAG 547



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 1/169 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F  L   Y    +  +A   +  M  +   P + + +  + SL    R D A+
Sbjct: 388 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 447

Query: 249 GFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           G   E+  R  I+P  +  N V+   CK G ++ A  + K ME  G  P   TY  LI G
Sbjct: 448 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 507

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +C K  +S A+ F + M + G  P+ IT N  I    K G  +E + + 
Sbjct: 508 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 556


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 209/439 (47%), Gaps = 20/439 (4%)

Query: 106 PFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRG 165
           P  +  VL  V+    ++L FF W +       +  T++++L IL +N   +S+  ++  
Sbjct: 47  PQLLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEK 106

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK--FRNATDTFCQMRDYG 223
           ++                 S +M +    V  L    + + KK         F +M   G
Sbjct: 107 VV-----------------SVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKG 149

Query: 224 FLPIIESCNKFLSSLLDSE-RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
            LP +++CN+ L  L D +  +D+A   Y  M    I P V T N ++ +FCK G ++ A
Sbjct: 150 MLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEA 209

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++   M+ MG +P+  TYN L++G  + G L  A +    M + G++ +  T++ LI G
Sbjct: 210 LQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRG 269

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           +C+KG+L EA+R+  EM +    P +VTYNT++ G  + G       L + M+   +  D
Sbjct: 270 YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 329

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +++YN LI G  + G   +A  L  +L    LVP+  TY+ LI G C   + + A +L  
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI+ G  P+   F +L+  FC+  +   A E+  EML + + PD         G    G
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A  +  +M  RG  P
Sbjct: 450 DPSKAFGMQEEMLARGFPP 468



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 179/362 (49%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S   +D L + Y  + +   A+    +M   G +P + + N  +  L    RV  A  
Sbjct: 257 EVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARK 316

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M    + P++ + N +++ + +LG I  A  +F  +   G +PSV TYNTLI G C
Sbjct: 317 LLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLC 376

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L +AM+ K+ M K+G  P+V TF  L+ GFCK G L  A  +F EM    + P+  
Sbjct: 377 RMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRF 436

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y T I G  ++G+      + EEML  G   D++TYN  I GL K G  K+A+ LVK +
Sbjct: 437 AYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 496

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             N LVP+  TY+++I    +  +  +A  ++  M+  G  P+   + +L+ ++      
Sbjct: 497 LYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRL 556

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
             A     EM EK + P+ I  + L +GL    K + A K F +M+ +G+ P  +     
Sbjct: 557 KLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTIL 616

Query: 550 IN 551
           IN
Sbjct: 617 IN 618



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/389 (25%), Positives = 200/389 (51%), Gaps = 7/389 (1%)

Query: 156 FKSSESILRGILDSDS-FDLPSKLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNA 212
            K+   +LR + D DS  D+  ++++ ++     C   P V  ++ +  ++  + K + A
Sbjct: 154 LKNCNRVLRLLRDRDSSIDVAREVYNVMVE----CGIRPTVVTYNTMLDSFCKQGKVQEA 209

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
                QM+  G LP   + N  ++ L  S  ++ A    +EM R  +  + YT + ++  
Sbjct: 210 LQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRG 269

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           +C+ G ++ A  + + M S G +P++ TYNT++ G C  G +S A K  ++M    + P+
Sbjct: 270 YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 329

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           ++++NTLI+G+ + G + EA  +F+E++   + P+VVTYNTLI+G  ++G+ ++   L +
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM+++G   D+ T+  L+ G CK G    A  L  ++    L P+   Y   I G+    
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           +  +AF + + M+  G  P+   + + +    +  +   A+E++ +ML   + PD +  +
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +       G    A  +F +M  +G+ P
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFP 538



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 110/208 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P + + N F+  L     +  A    K+M  N + P+  T   ++HA    G
Sbjct: 460 EMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAG 519

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A  VF  M S G  PSV TY  LI  +  +G L LA+     M + G+ PNVIT+N
Sbjct: 520 HLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYN 579

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK  K+ +A + F+EM+A  +SPN  TY  LIN    +G+ +    LY++ML  
Sbjct: 580 ALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 639

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYL 425
            I+ D  T++AL+  L K+ K+    +L
Sbjct: 640 EIQPDSCTHSALLKHLNKDYKSHVVRHL 667



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
            R A   F +M   G  P + +    + S     R+ +A+  + EM    + PNV T N 
Sbjct: 521 LRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 580

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  CK+  +++A + F  M++ G  P+  TY  LI+ +CN G    A++    M    
Sbjct: 581 LINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 640

Query: 329 IQPNVITFNTLIFGFCKKGKLH 350
           IQP+  T + L+    K  K H
Sbjct: 641 IQPDSCTHSALLKHLNKDYKSH 662


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 179/350 (51%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F  L  + A  K +        QM  +G  P + + N  ++S     R+  A    
Sbjct: 149 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 208

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T N ++   C  G I  A+ +F      GF P V TY TL++G C  
Sbjct: 209 AKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKV 268

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    M +   +PNVI +NT+I   CK  ++ EA  +FSEM    +SP++ TY
Sbjct: 269 GNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTY 328

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+    +   +   +L  EM+ + I  +++ ++ ++  LCKEG    A  +V  + K
Sbjct: 329 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 388

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + P+  TY+AL+ G C+R   + A +++ +M+  GC PN   + +L++ +CQ +  D+
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +L +M  + +  D++  + L  GL H G+ + A+ LF +M   G +P
Sbjct: 449 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 498



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 159/313 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  + SL    +V  A   + EM    ISP+++T N ++HA C L   +    +
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M +   +P+V  ++T++   C +G++++A    ++M K G++P+V+T+  L+ G C 
Sbjct: 348 LNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCL 407

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ EA ++F  M      PNV +YN LINGY Q+   +    L E+M   G+  D +T
Sbjct: 408 RSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 467

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLC  G+ + A  L  ++  +  +P+  TY  L+   C   +   A  L K++ 
Sbjct: 468 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 527

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S    +  ++ + +   C+  + + A ++   +  K + PD    + +  GL   G  +
Sbjct: 528 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD 587

Query: 526 LAMKLFRKMEIRG 538
            A KLFRKM+  G
Sbjct: 588 EANKLFRKMDENG 600



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 174/386 (45%), Gaps = 39/386 (10%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 286 CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVT 345

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I PNV   + V+ A CK G+I  A +V   M   G  P V TY  L+ GH
Sbjct: 346 TLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGH 405

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  + M   G  PNV ++N LI G+C+  ++ +A  +  +M    +  + 
Sbjct: 406 CLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADT 465

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNG------------------------------ 398
           VTYNTLI+G   VG  +   +L+ EM+ +G                              
Sbjct: 466 VTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA 525

Query: 399 -----IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                +  DIL YN  I G+C+ G+ + A  L  +L    L P+  TY+ +I G C R  
Sbjct: 526 IEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A +L++ M  +GC  +  I+  ++  F ++ +   A ++L EML +  + D    + 
Sbjct: 586 LDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTL 645

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   L   G D+     F ++ +RG+
Sbjct: 646 IVEMLSDDGLDQ----SFERLRLRGV 667



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 182/424 (42%), Gaps = 26/424 (6%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLF------DSILYSYRM-------------- 188
           +LT   K K   ++L      DSF +P  ++      +S  +  R+              
Sbjct: 156 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 215

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F+ L +      K   A   F +    GF P + +    ++ L        A+
Sbjct: 216 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 275

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M +    PNV   N ++ + CK   +  A  +F  M + G  P + TYN+LI   
Sbjct: 276 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 335

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           CN           N M  + I PNV+ F+T++   CK+G +  A+ +   M    V P+V
Sbjct: 336 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDV 395

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  L++G+      +    +++ M+  G   ++ +YN LI G C+  +  KA  L++ 
Sbjct: 396 VTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQ 455

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L+ +  TY+ LI G C     + A  L+  M+ SG  P+   + +L+   C+N  
Sbjct: 456 MSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 515

Query: 489 FDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
              A  VLL+ +E   +  D ++ +    G+   G+ E A  LF  +  +GL P     +
Sbjct: 516 LAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP----DV 570

Query: 548 RTIN 551
           RT N
Sbjct: 571 RTYN 574



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 112/266 (42%), Gaps = 35/266 (13%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  +   + +  L   +  R +   A   F  M   G +P + S N  ++     +R+D 
Sbjct: 389 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 448

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY----- 301
           A+G  ++M    +  +  T N ++H  C +G ++ A+ +F  M + G IP + TY     
Sbjct: 449 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 508

Query: 302 ------------------------------NTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
                                         N  I G C  G L  A    + +   G+QP
Sbjct: 509 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 568

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V T+N +I G CK+G L EAN++F +M     S +   YNT+I G+ +   +     L 
Sbjct: 569 DVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLL 628

Query: 392 EEMLRNGIKVDILTYNALILGLCKEG 417
           +EML  G   D+ T   ++  L  +G
Sbjct: 629 QEMLAEGFSADVSTTTLIVEMLSDDG 654



 Score = 38.9 bits (89), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 66/174 (37%), Gaps = 18/174 (10%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T+ I+L  L KN     +  +L+ I  S+                   D+  LV+++ 
Sbjct: 500 LVTYRILLDYLCKNHHLAEAMVLLKAIEGSN------------------LDADILVYNIA 541

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                   +   A D F  +   G  P + + N  +  L     +D A   +++M  N  
Sbjct: 542 IDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGC 601

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           S +    N ++  F +      A ++ + M + GF   V+T   ++    + GL
Sbjct: 602 SRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGL 655


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+          ++ D +  S++ C   P ++ ++ +       FRN+      M  
Sbjct: 117 VVRGLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHA 174

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYK----------------------------- 252
            G      +CN  L+++ +   VD A+G  +                             
Sbjct: 175 KGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234

Query: 253 ------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                 EM R   +PN+ T N ++   C+ G+ ER  EV   M   G  P +  Y T+I 
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L +A +  N M   G++PNV+ +NT++ G C   +  EA  + SEM   +   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT+N L++ + Q G  +    L E+ML +G   D++TY  +I G CKEG   +A  L+
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +      PN  +Y+ ++ G C       A +L   MI+ GC PN   F  L++  C+ 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++A E+L +ML    +PD I  S +  GL   GK E A++L   M  +G+ P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 174/350 (49%), Gaps = 1/350 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M  YG  P +   N  L  L  +ER   A     EM +     +  T N+++ 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC+ G+++R +E+ + M S G +P V TY T+I+G C +GL+  A+     M   G +P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +++  ++ G C  G+  +A  + S+M      PN VT+NTLIN   + G  E    L 
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++ML NG   D+++Y+ +I GL K GKT++A  L+  +    + PN   YS++       
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +  Q++ ++  +  R +  ++  ++S+ C+  + DRA +    M+     P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI-NCAPENGEKE 560
           + L  GL   G  + A +L  ++  RG L K   +   I NC  ENG+++
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQK 654



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y F P++         L    R+  AL    EM     +P     ++++ A C+ G    
Sbjct: 112 YTFFPVVRG-------LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +V V + M + G        N +++  C +G +  A+     +   G + +++++N ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +  EM   + +PN+VT+NTLI    + G  E    +  +M  +G   
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ ++ G C  +  + A +L 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M +  C  +   F +L+  FCQN   DR  E+L +ML     PD I  + + +G    
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 405 GLIDEAVMLLKSMSSCGCKP 424



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 52/376 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF---- 216
           +I+ GI      ++ +++ +  + SY +   + + ++ + K     ++++ A +      
Sbjct: 291 TIIDGICKEGHLEVANEILNR-MPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 217 ---CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
              C + D  F       N  +     +  VD  +   ++M  +   P+V T   V++ F
Sbjct: 349 QKDCPLDDVTF-------NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G+I+ AV + K+M S G  P+  +Y  ++ G C+ G    A +  + M + G  PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +TFNTLI   CKKG + +A  +  +M     SP++++Y+T+I+G G+ G +E    L   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 394 MLRNGI-----------------------------------KVDILTYNALILGLCKEGK 418
           M+  GI                                   + D + YNA+I  LCK  +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           T +A      +  N  +PN STY+ LI G      ++ A +L   +   G    KH+   
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL-RKHLMRH 640

Query: 479 LMSTFCQNEDFDRAAE 494
              + C  E+  +  E
Sbjct: 641 FGISNCTQENGKQKCE 656



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+   C  G I  A+EV   M   G  P    Y+ ++   C  G    ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G   +    N ++   C++G + EA  +  ++       ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L +EM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  ++   C  E +  A E+L E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M   G +P        IN
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 3/244 (1%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V  YN +++G+C  G L+ A +    +    + PN  TF  ++ G C +G++ +A  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM     +P    Y+ ++    + G       + E M   G  +D    N ++  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  L++ L       +  +Y+A++ G C+ K      +L   M+R  C PN   F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N  F+R  EVL +M E    PD  + + +  G+   G  E+A ++  +M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 538 GLLP 541
           GL P
Sbjct: 316 GLKP 319



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 121/275 (44%), Gaps = 7/275 (2%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V   N ++  +C+ G   +     +   ++   P+  T+  ++ G C +G ++ A++  +
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   G  P    ++ ++   C+ G    + R+   M A   + +    N ++N   + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L  ++   G + DI++YNA++ GLC   +      L+ ++ +    PN  T++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI   C     ER  ++   M   GC P+  ++  ++   C+    + A E+L  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 503 CMAPDSIILSELYSGLHHCGK----DELAMKLFRK 533
            + P+ +  + +  GL    +    +EL  ++F+K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 192/387 (49%), Gaps = 13/387 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           S+L D   +    C+   ++ + L     H  +F  A D F  M +   LP I    K L
Sbjct: 25  SRLLDLSFWVRAFCNYREILRNGL-----HSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + +   ++ D+ +     ++   +S ++YT N++M+ FC+      A      M  +GF 
Sbjct: 80  NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + T+ +LI+G C    +  AM   N M + GI+P+V+ + T+I   CK G ++ A  +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F +M+   + P+VV Y +L+NG    G      SL   M +  IK D++T+NALI    K
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EGK   A  L  ++ + S+ PN  TY++LI G C+    + A Q++  M   GC P+   
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L++ FC+ +  D A ++  EM +K +  ++I  + L  G    GK  +A ++F  M 
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379

Query: 536 IRGLLPKGFDKLRTIN----CAPENGE 558
            RG+ P     +RT N    C   NG+
Sbjct: 380 SRGVPP----NIRTYNVLLHCLCYNGK 402



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 168/331 (50%), Gaps = 3/331 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F QM +YG  P +      ++ L +S R   A    + M + +I P+V T N ++ 
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           AF K G    A E++  M  M   P++ TY +LI+G C +G +  A +   LME  G  P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V+ + +LI GFCK  K+ +A +IF EM    ++ N +TY TLI G+GQVG   +   ++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK---NSLVPNASTYSALITGQ 448
             M+  G+  +I TYN L+  LC  GK KKA  + +D+ K   + + PN  TY+ L+ G 
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     E+A  +++ M +         + +++   C+      A  +   +  K + P+ 
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  + + SGL   G    A  LFRKM+  G+
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 2/384 (0%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R F +   ILR  L S  F+    LF  ++ S  +   S + F  L    A  KKF    
Sbjct: 35  RAFCNYREILRNGLHSLQFNEALDLFTHMVESRPL--PSIIDFTKLLNVIAKMKKFDVVI 92

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           +    ++  G    + +CN  ++    S +  +A  F  +M +    P++ T   +++ F
Sbjct: 93  NLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF 152

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C    +E A+ +   M  MG  P V  Y T+I   C  G ++ A+   + ME  GI+P+V
Sbjct: 153 CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + +L+ G C  G+  +A+ +   M    + P+V+T+N LI+ + + G       LY E
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+R  I  +I TY +LI G C EG   +A  +   ++     P+   Y++LI G C  K 
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A +++  M + G   N   +  L+  F Q    + A EV   M+ + + P+    + 
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392

Query: 514 LYSGLHHCGKDELAMKLFRKMEIR 537
           L   L + GK + A+ +F  M+ R
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKR 416



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 167/383 (43%), Gaps = 38/383 (9%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +LL   +    +   A+    +M   GF P I +    ++      R++ A+    +M  
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P+V     ++ + CK G +  A+ +F  ME+ G  P V  Y +L++G CN G    
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A      M K  I+P+VITFN LI  F K+GK  +A  +++EM   +++PN+ TY +LIN
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+   G  +    ++  M   G   D++ Y +LI G CK  K   A  +  ++ +  L  
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 437 NASTYSALITG-----------------------------------QCVRKNSERAFQLY 461
           N  TY+ LI G                                    C     ++A  ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 462 KSMIR---SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + M +    G  PN   + +L+   C N   ++A  V  +M ++ M    I  + +  G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              GK + A+ LF  +  +G+ P
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKP 493



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G       D   K+F  +  S +    + + +  L + +    K   A + F  M 
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEM--SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR---NRISPNVYTLNMVMHAFCKLG 277
             G  P I + N  L  L  + +V  AL  +++M++   + ++PN++T N+++H  C  G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E+A+ VF++M        + TY  +I G C  G +  A+     +   G++PNV+T+ 
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVS 365
           T+I G  ++G  HEA+ +F +MK   VS
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 186/381 (48%), Gaps = 4/381 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           +I++G ++  + D   ++ + ++ Y    C  + +  ++L   +  + +   A     + 
Sbjct: 243 TIMQGYIEGGNLDGALRIKEQMVEYG---CPCTDVTVNVLINGFCKQGRIDQALSFIQEA 299

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              GF P   + N  ++ L        A+     M    + P++YT N ++   CKLG I
Sbjct: 300 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEI 359

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E AV++   M S    P+  TYN +IS  C +  +  A +   L+   GI P+V TFN+L
Sbjct: 360 EEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSL 419

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G C       A  +F EMK     P+  TYN LI+        E   +L +EM  NG 
Sbjct: 420 IQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGC 479

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +++ YN LI G CK  + ++A  +  +++   +  ++ TY+ LI G C  K  E A Q
Sbjct: 480 ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQ 539

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   MI  G RP+K  +  L++ FC+  D  +AA+++  M      PD +  + L SGL 
Sbjct: 540 LMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599

Query: 520 HCGKDELAMKLFRKMEIRGLL 540
             G+ ++A +L R ++++G++
Sbjct: 600 KAGRVQVASRLLRSIQMKGMV 620



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 215/479 (44%), Gaps = 63/479 (13%)

Query: 103 HLTP-FRVKHVL--LKVQKDYVLSLEFFTWVQTHK---PSSLTLETHSIVLHILTKNRKF 156
           HL P F  K ++  L+ Q D V +L  F W        PSS   E               
Sbjct: 57  HLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYE--------------- 101

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
                ILR +  + SF+   ++ + +  S   C+    +F +  ++Y   + +       
Sbjct: 102 ----EILRKLGKAGSFEYMRRVLEEMKLS--GCEFDRGIFLIFVESYGKFELYDEVVGIV 155

Query: 217 CQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             M D Y   P     N  L+ L+D+ ++ +    +  M R RI  +V T N+++ A CK
Sbjct: 156 KVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCK 215

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              +  A+ + + M S G  P  TT+ T++ G+   G L  A++ K  M + G     +T
Sbjct: 216 AHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVT 275

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            N LI GFCK+G++ +A     E  +    P+  TYNTL+NG  ++G+++    + + ML
Sbjct: 276 VNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAML 335

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA------------ 443
             G+  DI TYN+LI GLCK G+ ++A  ++  +      PNA TY+A            
Sbjct: 336 LGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVD 395

Query: 444 -----------------------LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
                                  LI G C+  N + A  L++ M   GCRP++  + ML+
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLI 455

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            + C +   + A  +L EM     A + +I + L  G     + E A ++F +ME++G+
Sbjct: 456 DSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGV 514



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 173/349 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K      + R A     +M  YG  P   +    +   ++   +D AL   ++M 
Sbjct: 206 FNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMV 265

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                    T+N++++ FCK G I++A+   +   S GF P   TYNTL++G C  G   
Sbjct: 266 EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAK 325

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM+  + M   G+ P++ T+N+LI G CK G++ EA +I  +M + + SPN VTYN +I
Sbjct: 326 HAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAII 385

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   +    +    +   +   GI  D+ T+N+LI GLC     K A  L +++      
Sbjct: 386 SSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCR 445

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI   C  +  E A  L K M  +GC  N  I+  L+  FC+N+  + A E+
Sbjct: 446 PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEI 505

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             EM  + ++ DS+  + L  GL    + E A +L  +M + GL P  F
Sbjct: 506 FDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKF 554



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 148/291 (50%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +SSL    RVD A    + +    I P+V T N ++   C     + A+++F+ M+ 
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P   TYN LI   C+   L  A+     ME NG   NV+ +NTLI GFCK  ++ E
Sbjct: 442 KGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEE 501

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  IF EM+   VS + VTYNTLI+G  +    E  A L ++M+  G++ D  TYN+L+ 
Sbjct: 502 AEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLT 561

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             CK G  KKAA +V+ +  +   P+  TY+ LI+G C     + A +L +S+   G   
Sbjct: 562 HFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVL 621

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
             H +  ++    +      A  +  EML+K   PD+I    +Y GL + G
Sbjct: 622 TPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 154/312 (49%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P I + N  +S L     ++ A+    +M     SPN  T N ++ + CK   ++ A
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEA 397

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            E+ + + S G +P V T+N+LI G C       AM     M+  G +P+  T+N LI  
Sbjct: 398 TEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDS 457

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C   KL EA  +  EM+    + NVV YNTLI+G+ +    E    +++EM   G+  D
Sbjct: 458 LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRD 517

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            +TYN LI GLCK  + + AA L+  +    L P+  TY++L+T  C   + ++A  + +
Sbjct: 518 SVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQ 577

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           +M  SGC P+   +  L+S  C+      A+ +L  +  K M       + +   L    
Sbjct: 578 TMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637

Query: 523 KDELAMKLFRKM 534
           +   AM+LFR+M
Sbjct: 638 RTHEAMRLFREM 649



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 186/398 (46%), Gaps = 14/398 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      +   K+ D ++   R C  + + ++ +  +     +   AT+    + 
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVS--RDCSPNAVTYNAIISSLCKENRVDEATEIARLLT 405

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + + N  +  L  S     A+  ++EM+     P+ +T NM++ + C    +E
Sbjct: 406 SKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLE 465

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ + K ME  G   +V  YNTLI G C    +  A +  + ME  G+  + +T+NTLI
Sbjct: 466 EALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLI 525

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  ++ +A ++  +M    + P+  TYN+L+  + + G+ +  A + + M  +G  
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+TY  LI GLCK G+ + A+ L++ +    +V     Y+ +I     R  +  A +L
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNED-FDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           ++ M+     P+   ++++    C        A +  +EM+E+   P+      L  GL 
Sbjct: 646 FREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705

Query: 520 HCGKDELAMKL---------FRKMEIRGLLPKGFDKLR 548
               D+  +KL         F + EI  +  +GF K+R
Sbjct: 706 TLSMDDTLVKLVDMIMEKAKFSEREISTI--RGFLKIR 741



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 149/332 (44%), Gaps = 14/332 (4%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFC- 274
           C+     FL  +ES  KF       E  D  +G  K M    RI P+    N++++    
Sbjct: 128 CEFDRGIFLIFVESYGKF-------ELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180

Query: 275 --KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
             KL ++E A     +M        V+T+N LI   C    +  A+     M   G+ P+
Sbjct: 181 ANKLKLVESA---HSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             TF T++ G+ + G L  A RI  +M         VT N LING+ + G  +   S  +
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQ 297

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           E +  G + D  TYN L+ GLCK G  K A  +V  +    L P+  TY++LI+G C   
Sbjct: 298 EAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLG 357

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A ++   M+   C PN   +  ++S+ C+    D A E+   +  K + PD    +
Sbjct: 358 EIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFN 417

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            L  GL      + AM LF +M+ +G  P  F
Sbjct: 418 SLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF 449



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/227 (19%), Positives = 85/227 (37%), Gaps = 19/227 (8%)

Query: 330 QPNVI----TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           QPN +     +  ++    K G      R+  EMK +    +   +   +  YG+     
Sbjct: 90  QPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKF---- 145

Query: 386 MGASLYEEML--------RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
               LY+E++           IK D   YN L+  L    K K        + +  +  +
Sbjct: 146 ---ELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHD 202

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
            ST++ LI   C       A  + + M   G  P++  F  +M  + +  + D A  +  
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +M+E       + ++ L +G    G+ + A+   ++    G  P  F
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQF 309


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 192/395 (48%), Gaps = 10/395 (2%)

Query: 144 SIVLHILTKNRKFKSS----ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +IV  +   +R FK S       L+ +L++ S D    +F+ +L +    DS    + L+
Sbjct: 109 AIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDS--YTYHLV 166

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            K+     +   A     + +  GF P +        +   + R+  AL    E+ RN  
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDAL----EIFRNIP 222

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP+    N ++H  C+    + A+E  K M      P V TYN LI G C       A +
Sbjct: 223 SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M   G+ P+ +TFN+++ G CK GK   A+ + + M   N  P+  TYNTLI+G  
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +  N +    L +E + +G   D++TY+ L  GLCK G+  +A  LVK++      PN  
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C    +E+A++L +S++ SG  P+   + +++   C+    D+A +++  M
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L++   P  I  + L  GL   G+ + A  +F++M
Sbjct: 463 LKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/501 (25%), Positives = 223/501 (44%), Gaps = 38/501 (7%)

Query: 66  IPHRTL----------PEPKGQD-LDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLL 114
           IPHR L           E   QD LD + +  S    +  ++L      L P  V  VL 
Sbjct: 44  IPHRQLHLSTARKLARSESLQQDVLDLLGLLQSG--SNIRERLEQWRGTLQPAVVSRVLQ 101

Query: 115 KVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS----D 170
           ++ KD   ++ FF W         T  T +  L  L +N       ++   +LD+    D
Sbjct: 102 RL-KDPQTAIVFFVWAGDRGFKHSTF-TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPD 159

Query: 171 SFDLPSKL-----FDSILYSYRMCDSSPL--------VFDLLFKTYAHRKKFRNATDTFC 217
           S+     +      + I  ++ M D + +        V+ +L + +    + ++A + F 
Sbjct: 160 SYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFR 219

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +      P   + N  +         D AL F KEM   +++P+V+T N+++   CK  
Sbjct: 220 NIPS----PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKAS 275

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             ++A E+   M   G  P   T+N+++ G C  G    A     +M +   +P+  T+N
Sbjct: 276 KTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYN 335

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G CK+  +  A  +  E  ++   P+VVTY+ L +G  + G  +    L +EM   
Sbjct: 336 TLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   +++TYN LI GLCK  KT+KA  L++ L  +  VP+  TY+ ++ G C     ++A
Sbjct: 396 GCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 455

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++ + M++ GC P+   +  LM   C+    D A  +  EM+ K    D++    L +G
Sbjct: 456 LKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNG 515

Query: 518 LHHCGKDELAMKLFRKMEIRG 538
                + + A K+     IRG
Sbjct: 516 YCKSSRTKEAQKVVDG--IRG 534



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 3/348 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   +  +     A +   +M +    P + + N  +  L  + + D A     E
Sbjct: 227 IAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHE 286

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+  T N +M   CK G  ERA  +   M      PS  TYNTLISG C +  
Sbjct: 287 MVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQN 346

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    +    +G  P+V+T++ L  G CK+G++ EA  +  EM     +PN+VTYNT
Sbjct: 347 VDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNT 406

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  +   +E    L E ++ +G   D++TY  ++ GLCKEG+  KA  +V+ + K  
Sbjct: 407 LIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRG 466

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+AL+ G C     + A  ++K M+   C  +   +  L++ +C++     A 
Sbjct: 467 CTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +V+  +      P   + + L  G    G+ +    +F  M  RG +P
Sbjct: 527 KVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVP 571



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 185/417 (44%), Gaps = 45/417 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D    +F  ++   + C +  L +  L   Y    + + A      +R
Sbjct: 476 ALMEGLCRTGRVDEAHHIFKEMVS--KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 533

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P I+  N  +       R+D     +++M      PN+ T N+VM   CK G ++
Sbjct: 534 G---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 590

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A    ++M S G +P V +YN +I G         A +  + M + GI P+ +T+NTL+
Sbjct: 591 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 650

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-- 398
             FCK+ +  +A  I   M    V P+ VTYNTLI+G  Q         L  EMLRNG  
Sbjct: 651 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 710

Query: 399 ----------------------------------IKVDILTYNALILGLCKEGKTKKAAY 424
                                             ++ + +TYN  I  LCKEG+  +A+ 
Sbjct: 711 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 770

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR-SGCRPNKHIFEMLMSTF 483
           L+ ++D    + +  +Y+ +I G C  +  +RA +L + M+   G     H F +L+  F
Sbjct: 771 LLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 827

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + +  D A  +L  M+++  +P  I  + + + L    K + A +LF +M +RG++
Sbjct: 828 TKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIV 884



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 39/338 (11%)

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
           RG +D ++F+L  ++      S + C  + + ++ L        K   A +    +   G
Sbjct: 379 RGRID-EAFELVKEM------SGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F+P + +    +  L    R+D AL   + M +   +P+V T   +M   C+ G ++ A 
Sbjct: 432 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 491

Query: 284 EVFKNM-------ESMGFI-------------------------PSVTTYNTLISGHCNK 311
            +FK M       +++ ++                         P +  YN L+ G+C +
Sbjct: 492 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKE 551

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L         M   G  PN+ T+N ++ G CK GK+ EA      M +    P+VV+Y
Sbjct: 552 GRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I+G  +    +    + ++M++ GI  D +TYN L+   CKE +   A  ++K++ K
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
             + P+  TY+ LI+G         A++L   M+R+GC
Sbjct: 672 AGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 38/318 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++ D LFK  +  K+ R   D   QM   G  P   + N  ++     ER D A+G  K 
Sbjct: 613 IIIDGLFKA-SKPKEARQVLD---QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 668

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV-TTYNTLISGHCNKG 312
           M +  + P+  T N ++    +   +  A E+   M   G + S  TTYNT+I   C +G
Sbjct: 669 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM------------- 359
            L  A+   + M  +G++ N +T+N  I   CK+G+L EA+ + SEM             
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVI 788

Query: 360 ----------KATNVSPNVV----------TYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
                     +A+ ++  +V          T+N LI+ + +    +   +L   M++ G 
Sbjct: 789 IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGC 848

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              ++TYN +I  LCK  K  KA  L  ++    +V ++ +Y+ LI G C +   + A Q
Sbjct: 849 SPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQ 908

Query: 460 LYKSMIRSGCRPNKHIFE 477
           + + M  S C  +   +E
Sbjct: 909 VLEEMASSDCEIDDLKWE 926


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 178/355 (50%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C  +   ++ L        +F  A     +MRD G +P + + N  +S+L  + R+  
Sbjct: 73  KGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSE 132

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + EMR     P+ +T N +++   K+G  ++A+E+ + ME  G  P V TY++LI+
Sbjct: 133 AFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLIT 192

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G    A K    M++ G +P+ ITF  L+    K G++ +A  +  EMK   V P
Sbjct: 193 GLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKP 252

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            VVTYN LI G+G+VG+     +L +EM RNG K D++TY+ LI GL K  +  +A  ++
Sbjct: 253 GVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVL 312

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K ++K    P+  TY+ LI G         A +L+  M   GC P+   +  L++   + 
Sbjct: 313 KKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKA 372

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + A  +  EM    + PD      + + L   G+ + A +LF +M  +GL P
Sbjct: 373 ARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 168/349 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L  +     K+  A +   +M+  G  P + + N  +  L  + + D AL    EMR
Sbjct: 47  YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N   P+V T N ++    K G +  A  +F  M   G +P   TYN+LI G    G   
Sbjct: 107 DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQ 166

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM+    ME++G  P+V+T+++LI G  K G+  +A ++F EMK     P+ +T+  L+
Sbjct: 167 KAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALM 226

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G  +    L +EM   G+K  ++TYNALI G  K G   +A  L+ ++ +N   
Sbjct: 227 DALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCK 286

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS LITG       + A Q+ K M + GC P+   +  L++   +    + A  +
Sbjct: 287 PDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              M  K   PD +  S L + L    + E A  LF +ME  G+ P  F
Sbjct: 347 FDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLF 395



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 174/348 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L    A   +   A   F +++   + P + S +  ++SL  + + + AL    E
Sbjct: 10  VTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAE 69

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+     PN++T N ++    K G  + A+ +   M   G +P V TYN LIS     G 
Sbjct: 70  MQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGR 129

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A      M + G  P+  T+N+LI+G  K G+  +A  +  EM+     P+V+TY++
Sbjct: 130 LSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G G+ G +     L++EM R G K D +T+ AL+  L K G+   A  L+ ++ +  
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERG 249

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P   TY+ALI G     +   A+ L   M R+GC+P+   +  L++   +    D A 
Sbjct: 250 VKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEAC 309

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +VL +M ++   PD+I  + L +GL   G    A +LF +M+ +G  P
Sbjct: 310 QVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP 357



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 168/316 (53%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  L++L  + + + A   ++E++  + +P+V + + ++++  + G  E A+EV
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M++ G  P++ TYNTL+      G    A++    M  NG  P+V T+N LI    K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+L EA  +F+EM+     P+  TYN+LI G G+VG S+    L EEM R+G   D++T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++LI GL K+G+T KA  L +++ +    P++ T++AL+         + A +L   M 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G +P    +  L++ F +  D   A  +L EM      PD +  S L +GL    + +
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 526 LAMKLFRKMEIRGLLP 541
            A ++ +KME  G  P
Sbjct: 307 EACQVLKKMEKEGCPP 322



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M+  G  P   +    + +L  + RVD AL    EM+   + P V T N ++  F K
Sbjct: 207 FQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGK 266

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           +G +  A  +   M+  G  P V TY+ LI+G      L  A +    MEK G  P+ IT
Sbjct: 267 VGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTIT 326

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTLI G  K G L++A R+F  MK+   +P+VVTY+TLI   G+    E    L+EEM 
Sbjct: 327 YNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             GI+ D+ TY ++I  L K G+   A  L  ++    L P+  TY+A +         +
Sbjct: 387 SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++++ M  SG  P+   ++ L+    + ++ D A  +L E++E+  A DS+   E  
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
             L   G  + A +L +    +GL P
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWP 532



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/282 (33%), Positives = 151/282 (53%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SPNV T N +++A  K G  E A  +F+ +++  + P V +Y+ LI+     G    A++
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M+  G +PN+ T+NTL+    K G+  EA R+ +EM+     P+V TYN LI+  G
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G      +L+ EM   G   D  TYN+LI GL K G+++KA  L+++++++   P+  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS+LITG      + +AF+L++ M R G +P+   F  LM    +    D A E+L EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+ + P  +  + L +G    G    A  L  +M+  G  P
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP 287



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 181/398 (45%), Gaps = 37/398 (9%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLF  +    R  DS  + F  L        +  +A +   +M++ G  P + + N  ++
Sbjct: 205 KLFQEMKRRGRKPDS--ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  +  A     EM+RN   P+V T + ++    K   ++ A +V K ME  G  P
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
              TYNTLI+G    GLL+ A +  + M+  G  P+V+T++TLI    K  ++  A  +F
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM++  + P++ TY ++I   G+ G  +    L+ EM   G+  D++TYNA +  L + 
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ K+A  + +D+ ++ L+P+ +TY AL+ G    K  + A  L K +I  GC  +   F
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKF 502

Query: 477 EMLMSTFCQNEDFDRAAEVL----------------------------------LEML-E 501
           +  +       + D A E+L                                  LE L E
Sbjct: 503 DECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKE 562

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   PD +  S L S L   G+ + A +L  +M  RGL
Sbjct: 563 QGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 170/366 (46%), Gaps = 3/366 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C      ++ L        + + A +   +M  +G  P + + +  ++ L        
Sbjct: 143 RGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVK 202

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++EM+R    P+  T   +M A  K G ++ A+E+   M+  G  P V TYN LI+
Sbjct: 203 AFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIA 262

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G L  A    + M++NG +P+V+T++ LI G  K  +L EA ++  +M+     P
Sbjct: 263 GFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPP 322

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TYNTLING G+ G       L++ M   G   D++TY+ LI  L K  + + A  L 
Sbjct: 323 DTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLF 382

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           ++++   + P+  TY ++IT        + A +L+  M   G  P+   +   +++  + 
Sbjct: 383 EEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRG 442

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
             F  A ++  +M E  + PD      L  GL    + + A  L +++  +G     FD 
Sbjct: 443 GRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGC---AFDS 499

Query: 547 LRTINC 552
           L+   C
Sbjct: 500 LKFDEC 505



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 135/317 (42%), Gaps = 35/317 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  L        +   A     +M   G  P   + N  ++ L  +  ++ A 
Sbjct: 285 CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAG 344

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M+    +P+V T + ++ A  K   +E A  +F+ MES+G  P + TY ++I+  
Sbjct: 345 RLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVL 404

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +  A +  + M   G+ P+VIT+N  +    + G+  EA +IF +MK + + P+V
Sbjct: 405 GKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDV 464

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL------------------------ 404
            TY+ L+ G  +    +    L +E++  G   D L                        
Sbjct: 465 ATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQF 524

Query: 405 -----------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                      +YNALI  L K G+  +A   ++DL +    P+  +YS+LI+       
Sbjct: 525 ANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQ 584

Query: 454 SERAFQLYKSMIRSGCR 470
            + AF+L + M + G +
Sbjct: 585 IDTAFELLEEMSKRGLK 601



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/285 (22%), Positives = 131/285 (45%), Gaps = 2/285 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   +   +LFD +    + C+   + +  L        +  +A   F +M 
Sbjct: 329 TLINGLGKAGLLNDAGRLFDRM--KSKGCNPDVVTYSTLITALGKAARVESACVLFEEME 386

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    ++ L  + +VD A   + EMR   +SP+V T N  +++  + G  +
Sbjct: 387 SVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFK 446

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F++M+  G +P V TY+ L+ G      +  A      + + G   + + F+  +
Sbjct: 447 EARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECL 506

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                 G + EA+ +     +  + P   +YN LI+   + G      +  E++   G K
Sbjct: 507 EILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGK 566

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            DI++Y++LI  L + G+   A  L++++ K  L  +  +YS L+
Sbjct: 567 PDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLV 611



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%)

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TYN+L+  L K G+ ++A  L ++L      P+  +YS LI         E A ++ 
Sbjct: 8   NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   GC+PN   +  L+    +   FD A  +L EM +    PD    + L S L   
Sbjct: 68  AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKA 127

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G+   A  LF +M  RG +P  F
Sbjct: 128 GRLSEAFTLFAEMRERGCVPDTF 150


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 181/382 (47%), Gaps = 10/382 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F     + D +    + C  + + ++++        +  +A +   ++  
Sbjct: 182 LLEAVCKSSGFGEAMNVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSS 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P I S    L  L  + R D     + EM   +  PN  T +M++  FC+ G++ER
Sbjct: 240 YGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVER 299

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V + M   G  P+ T  N +I+  C +G +  A  F N M   G  P+ I++ T++ 
Sbjct: 300 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLR 359

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+ G+   A  +  EM   N  PN VT+NT I    Q G  E    L E M   G  V
Sbjct: 360 GLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSV 419

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            I+TYNAL+ G C +G+   A  L  +L      PN  TY+ L+TG C  +  + A +L 
Sbjct: 420 GIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELL 476

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             MI+  C  N   F +L+S FCQ    + A E++ +M+E    P+ I  + L  G+   
Sbjct: 477 AGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKD 536

Query: 522 GKDELAMKLFRKMEIRGLLPKG 543
              E A++L     + GL+ KG
Sbjct: 537 CNSEEALEL-----LHGLVSKG 553



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 171/380 (45%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+RG+ D         L D +L   R C  S + + +L +       F  A +   +MR 
Sbjct: 147 IIRGLCDRGRVGDALALLDDMLQ--RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRA 204

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + N  ++ +    RVD A      +      P++ +   V+   C     + 
Sbjct: 205 KGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDD 264

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
              +F  M     +P+  T++ L+   C  G++  A++    M ++G  PN    N +I 
Sbjct: 265 VKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVIN 324

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             CK+G++ +A    + M     +P+ ++Y T++ G  + G  E    L  EM+R     
Sbjct: 325 AICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPP 384

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +T+N  I  LC++G  ++A  L++ + +        TY+AL+ G CV+   + A +L+
Sbjct: 385 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 444

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            ++    C PN   +  L++  C  E  D AAE+L  M++K    +++  + L S     
Sbjct: 445 NNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQK 501

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  E AM+L  +M   G  P
Sbjct: 502 GFVEEAMELVNQMMEHGCTP 521



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 145/312 (46%), Gaps = 3/312 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +  C K + +L    R   A    +    +    +V+  N ++  +C+ G ++ A
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +   + SM   P   TY  +I G C++G +  A+   + M + G QP+V+T+  L+  
Sbjct: 129 RRL---IASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEA 185

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK     EA  +  EM+A   +PN+VTYN +ING  + G  +    +   +   G + D
Sbjct: 186 VCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPD 245

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I++Y  ++ GLC   +      L  ++     VPN  T+  L+   C     ERA Q+ +
Sbjct: 246 IVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + GC PN  +  ++++  C+    D A + L  M      PD+I  + +  GL   G
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 523 KDELAMKLFRKM 534
           + E A +L  +M
Sbjct: 366 RWEHAKELLPEM 377



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 147/313 (46%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + PII         L D  RV  AL    +M +    P+V T  +++ A CK      
Sbjct: 142 YTYTPIIRG-------LCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE 194

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ V   M + G  P++ TYN +I+G C +G +  A +  N +   G QP+++++ T++ 
Sbjct: 195 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 254

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM      PN VT++ L+  + + G  E    + ++M ++G   
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP 314

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C     E A +L 
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R  C PN+  F   +   CQ    ++A +++  M E   +   +  + L  G    
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 522 GKDELAMKLFRKM 534
           G+ + A++LF  +
Sbjct: 435 GRVDSALELFNNL 447



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 185/423 (43%), Gaps = 42/423 (9%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L+G+  +  +D    LF  ++   + C  + + FD+L + +        A     
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVD--KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQ 305

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIA------LGFYK------------------- 252
           QM  +G  P    CN  ++++    RVD A      +G Y                    
Sbjct: 306 QMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAG 365

Query: 253 ----------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
                     EM R    PN  T N  +   C+ G+IE+A+++ + M   G    + TYN
Sbjct: 366 RWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYN 425

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            L+ G C +G +  A++ F NL      +PN IT+ TL+ G C   +L  A  + + M  
Sbjct: 426 ALVHGFCVQGRVDSALELFNNL----PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQ 481

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            +   N VT+N L++ + Q G  E    L  +M+ +G   +++T+N L+ G+ K+  +++
Sbjct: 482 KDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEE 541

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L+  L    +  +  TYS+++        +E A Q+  ++   G RP   ++  ++ 
Sbjct: 542 ALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILF 601

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  + D+A +    M+     P+      L  GL H G  + A  +  ++  +G+L 
Sbjct: 602 ALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLS 661

Query: 542 KGF 544
           K  
Sbjct: 662 KSL 664



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 136/282 (48%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+VY    ++   C+ G    A  V +  E+ G    V  YNTL++G+C  G L  A  
Sbjct: 71  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA-- 128

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            + L+    + P+  T+  +I G C +G++ +A  +  +M      P+VVTY  L+    
Sbjct: 129 -RRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVC 187

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +        ++ +EM   G   +I+TYN +I G+C+EG+   A  ++  L      P+  
Sbjct: 188 KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIV 247

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ ++ G C  +  +    L+  M+   C PN+  F+ML+  FC+    +RA +VL +M
Sbjct: 248 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 307

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +    P++ + + + + +   G+ + A      M + G  P
Sbjct: 308 SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 349


>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
          Length = 581

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 184/346 (53%), Gaps = 18/346 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVM 270
           A++  C++  Y +       NK +SSL+   RV   +  ++   ++R+ SP+V++ N+V+
Sbjct: 204 ASEFGCRVEAYAY-------NKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVI 256

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
              C++G +++A+E+ + M   G  P   T+N ++ G C    +S   +    ++++G+ 
Sbjct: 257 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 316

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PNV+TF ++I G+CK GKL +A  ++++M A+ + PN VTYN LINGYG+VG+      
Sbjct: 317 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 376

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y++M R     D++T+++LI G C+ G+   A  +  D+ ++ + PN  T+S +I   C
Sbjct: 377 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 436

Query: 450 VRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +  S+ A +L   + +R    P   I+  ++   C+    D A  +   M EK   PD 
Sbjct: 437 KQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 496

Query: 509 IILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINC 552
              + L  G  +C K  +  A+  F +M   G  P       T+NC
Sbjct: 497 YTYTILIIG--YCMKSRISEAIMFFHEMVEAGCSPDSI----TVNC 536



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           RD   +P + +    +S    + +++ A+  Y +M  + I PN  T N++++ + K+G +
Sbjct: 312 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 371

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             AVEV++ M  +   P V T+++LI G+C  G L  A++  + M ++ IQPNV TF+ +
Sbjct: 372 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 431

Query: 340 IFGFCKK------------------------------------GKLHEANRIFSEMKATN 363
           I   CK+                                    GK+ EAN I   M+   
Sbjct: 432 IHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 491

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+  TY  LI GY            + EM+  G   D +T N  I  L K G   +  
Sbjct: 492 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD 551

Query: 424 YLVK 427
           ++++
Sbjct: 552 HVMR 555



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 106/272 (38%), Gaps = 60/272 (22%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPL------ 194
           TH+I++  L +  +      +LR  L  D   +P+ + F S++  Y  C +  L      
Sbjct: 286 THNIIVDGLCRTNEVSRGHEVLRR-LQRDGVCMPNVVTFTSVISGY--CKAGKLEDAMAV 342

Query: 195 --------------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                          +++L   Y       +A + + QM      P + + +  +     
Sbjct: 343 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 402

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK------------------------- 275
             ++D AL  + +M ++RI PNVYT ++++H+ CK                         
Sbjct: 403 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAF 462

Query: 276 -----------LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
                       G ++ A  + K ME  G  P   TY  LI G+C K  +S A+ F + M
Sbjct: 463 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 522

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + G  P+ IT N  I    K G  +E + + 
Sbjct: 523 VEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 554


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/413 (28%), Positives = 202/413 (48%), Gaps = 20/413 (4%)

Query: 146 VLHILTKNRKFKSSESILRGILDS----DSFDLPSKLF--------DSILYSY-RM---- 188
           V++ L K+   + +ESI+  +  S    D+F   S +         DS    + RM    
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   +  L     +  +   A D   +M  +G LP + +    + +L D  R++ A 
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M++    PNVYT   ++       +   A+ +F  M   G +P+  TYN L++  
Sbjct: 354 KIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVL 410

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  A+   N+M K+G  PN  ++N LI G+C  G   +A  + + M     +P +
Sbjct: 411 MENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTL 470

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN +I GY   G++++   + E M  NG + D  +Y  LI G CK  K + A+ +  +
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN  TY+ALI+G C  +  + A ++ + M RSGCRPN   + +L+    +  +
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           F  A E+   MLE+ ++PD +  S + +GL + G   LA+++F KM   G LP
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP 643



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/332 (29%), Positives = 168/332 (50%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A   F +M   G +P   + N  ++ L+++  +D AL  +  M ++   PN  + N +
Sbjct: 382 RMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNEL 441

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  +C +G  E+A+ +  NM      P++ TYN +I G+C+ G   +A++   LM+ NG 
Sbjct: 442 IRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGC 501

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QP+  ++  LI GFCK  K+  A+ +F+EM    + PN VTY  LI+GY +    +  A 
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           + E M R+G + ++ TYN LI GL K+     A  L K + +  + P+  TYS +I G C
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                  A +++  M++ GC PN H +  L+    Q    + A E+  E+ ++ + PD +
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++       GK + A     +M   G  P
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/507 (26%), Positives = 231/507 (45%), Gaps = 20/507 (3%)

Query: 62  NPIPIPHR---TLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQK 118
           +P+  P +    L +P+ +       A S L   DW++ T L++ LTP +   V  +   
Sbjct: 58  DPVGSPSQRPEELTQPRPRKATLTKRALSCLAQPDWQRSTLLAS-LTPEKAAFVAARCLV 116

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD---SDSFDLP 175
             V +LEF  ++          +T + V   L ++R   ++    R  +    S+  ++ 
Sbjct: 117 P-VRALEFLLFLSREHSHKYGPDTFAKVAMRLLESRDRPAAVGRARIHMIKSCSNKAEMT 175

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
             L    ++S R        +  L              D + Q+   G  P +   N  +
Sbjct: 176 QALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVI 235

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           ++L     V  A     ++ ++ + P+ +T   ++  +C+   ++ A E+F  M+  G  
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+  TY+TLI+G CN G ++ A+ F + M ++G+ P V TF   I   C  G++ +A +I
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F +MK     PNV TY +LI+G      S M   L+  M R+G+  + +TYNAL+  L +
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISGQRV---SRMAIGLFHRMSRDGVVPNTVTYNALMNVLME 412

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             +   A  +   + K+  +PN S+Y+ LI G C   ++E+A  +  +M++    P    
Sbjct: 413 NMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVT 472

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +++  +C + D D A  VL  M      PD    +EL SG     K ELA  +F +M 
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMM 532

Query: 536 IRGLLP---------KGFDKLRTINCA 553
            RGL P          G+ K   ++CA
Sbjct: 533 DRGLCPNEVTYTALISGYCKDEKLDCA 559



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 175/352 (49%), Gaps = 5/352 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD-IALGFYKEMRRNRISPNVYTL 266
           +  +A   F  M+  G  P + +     +SL+  +RV  +A+G +  M R+ + PN  T 
Sbjct: 348 RIEDAWKIFIDMKKKGCKPNVYT----YTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTY 403

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N +M+   +   I+ A+ VF  M   G +P+ ++YN LI G+C  G    AM     M K
Sbjct: 404 NALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLK 463

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
               P ++T+N +I G+C  G    A R+   MKA    P+  +Y  LI+G+ ++   E+
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMEL 523

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            + ++ EM+  G+  + +TY ALI G CK+ K   AA +++ + ++   PN  TY+ LI 
Sbjct: 524 ASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIH 583

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G   + N   A +L K M+     P+   +  +++  C N     A E+  +M++    P
Sbjct: 584 GLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLP 643

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           +    S L   L   G+ E A ++F +++ +GL+P     ++ I     +G+
Sbjct: 644 NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGK 695



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 148/327 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L        +  +A   F  M  +G LP   S N+ +         + A+     
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M + R +P + T N+++  +C  G  + A+ V + M++ G  P   +Y  LISG C    
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           + LA    N M   G+ PN +T+  LI G+CK  KL  A R+   MK +   PNV TYN 
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  +  N      L + ML   I  D++TY+ +I GLC  G    A  +   + K+ 
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +PN  TYS+LI         E A +++  + + G  P++  +  ++     +   DRA 
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHH 520
           + L EM+     P       L  GL +
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQN 727



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 176/431 (40%), Gaps = 59/431 (13%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I++G  DS   D+  ++ +  L     C      +  L   +    K   A+  F +M D
Sbjct: 476 IIKGYCDSGDTDVAIRVLE--LMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMD 533

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P   +    +S     E++D A    + M+R+   PNV T N+++H   K      
Sbjct: 534 RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSG 593

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A E+ K M      P V TY+T+I+G CN G + LA++  N M K+G  PN+ T+++LI 
Sbjct: 594 AEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQ 653

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVT------------------------------- 370
              ++G++ EA  +FSE+K   + P+ VT                               
Sbjct: 654 ALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP 713

Query: 371 ----YNTLINGY----------------------GQVGNSEMGASLYEEMLRNGIKVDIL 404
               Y+ LI G                        Q+ N ++ + L  ++     ++   
Sbjct: 714 TLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQ 773

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            Y+AL+  L + G+  +A  L + +   S  PN  TY   +         + A  ++K M
Sbjct: 774 LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHM 833

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
               C  +   ++ L+ T CQ      A  V  +ML + +  D I+ + L +GL   G  
Sbjct: 834 SDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYK 893

Query: 525 ELAMKLFRKME 535
           +L M+    ME
Sbjct: 894 DLCMEFLHIME 904



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/333 (18%), Positives = 137/333 (41%), Gaps = 46/333 (13%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY---RMCDSSPLVF 196
           ++T+++++H LTK   F  +E + + +L+           D + YS     +C++  +  
Sbjct: 575 VQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISP------DVVTYSTVINGLCNNGAIPL 628

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
                          A + F +M  +G LP + + +  + +L    RV+ A   + E+++
Sbjct: 629 ---------------ALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKK 673

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             + P+  T   ++      G ++RA +    M + G  P++ TY+ LI G  N+ +   
Sbjct: 674 QGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHK 733

Query: 317 AMKFKNLMEKNGIQPNVIT----------------------FNTLIFGFCKKGKLHEANR 354
            +   N    +     +I                       ++ L+    + G+  EAN 
Sbjct: 734 LVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANN 793

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           ++  M + +  PN  TY   +    +    ++   +++ M     ++ +  Y  LI  LC
Sbjct: 794 LYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLC 853

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           +  + K+A ++ + +   +L  +   ++ LI G
Sbjct: 854 QLHRRKEARFVFEKMLSRALNADEIVWTILING 886



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++D L    +   ++  A + +  M      P  ++   FL SLL + +VD+A+  +K M
Sbjct: 774 LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHM 833

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R   ++     ++   C+L   + A  VF+ M S         +  LI+G    G  
Sbjct: 834 SDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYK 893

Query: 315 SLAMKFKNLMEKNGIQPN 332
            L M+F ++ME N   P+
Sbjct: 894 DLCMEFLHIMETNRRNPS 911


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 178/372 (47%), Gaps = 35/372 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A + + +MR+ G  P + +    + +L +S R   AL  + EMR     PNVYT  
Sbjct: 270 KLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYT 329

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++   CK G ++ A+++   M   G  PSV  +N LI  +C +G++  A+    LME  
Sbjct: 330 VLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESK 389

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PNV T+N LI GFC+   +  A  + ++M  + +SP+VVTYNTLI+G  +VG  +  
Sbjct: 390 KVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSA 449

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           + L+  M+R+G   D  T+NA ++ LC+ G+  +A  +++ L +  +  N   Y+ALI G
Sbjct: 450 SRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDG 509

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNK---------------------------------- 473
            C     E A  L+K M+   C PN                                   
Sbjct: 510 YCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPT 569

Query: 474 -HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            H + +L+    +  DFDRA E+L  ++     P+ +  +         G+ E A ++  
Sbjct: 570 LHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVI 629

Query: 533 KMEIRGLLPKGF 544
           K++  G+L   F
Sbjct: 630 KIKNEGVLLDSF 641



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 34/457 (7%)

Query: 94  WKKLTALST---HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
           W+K  +L T    LTP  +   L  +  D + +L FF W++ H     +L TH  +L +L
Sbjct: 38  WRKDPSLKTLIPSLTP-SLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLL 96

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
            ++R  +++E++   ++ S +    +    ++L   R  +++    D     + H+  F+
Sbjct: 97  VRHRTLRAAENVRNSMIKSCTSPHDATFLLNLL---RRMNTAAAAAD-----HQHQLAFK 148

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM---RRNRISPNVYTLN 267
            +  ++               N+ L  L     VD  +  YKEM     N + PN+ TLN
Sbjct: 149 LSLTSY---------------NRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLN 193

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++++CKLG +  A   F  +      P + TY +L+ G+C    +  A     +M + 
Sbjct: 194 TMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR 253

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
               N +++  LI G C+ GKLHEA   ++ M+     P V TY  L+    + G     
Sbjct: 254 ----NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEA 309

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            SL+ EM   G + ++ TY  LI  LCKEG+  +A  ++ ++ +  + P+   ++ALI  
Sbjct: 310 LSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGS 369

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C R   E A  +   M      PN   +  L+  FC+ +  DRA  +L +M+E  ++PD
Sbjct: 370 YCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPD 429

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + L  GL   G  + A +LFR M   G  P  +
Sbjct: 430 VVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQW 466



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 170/355 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+ +   + +L        +   A     +M + G  P +   N  + S      ++ 
Sbjct: 319 RGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMED 378

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G    M   ++ PNV T N ++  FC+   ++RA+ +   M      P V TYNTLI 
Sbjct: 379 AVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIH 438

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G++  A +   LM ++G  P+  TFN  +   C+ G++ EA++I   +K  +V  
Sbjct: 439 GLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKA 498

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N   Y  LI+GY + G  E  ASL++ ML      + +T+N +I GL KEGK + A  LV
Sbjct: 499 NEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLV 558

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +D+ K  + P   TY+ L+       + +RA ++   +I SG +PN   +   +  +C  
Sbjct: 559 EDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQ 618

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + A E+++++  + +  DS I + L +     G  + A  + R+M   G  P
Sbjct: 619 GRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEP 673



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 168/348 (48%), Gaps = 6/348 (1%)

Query: 189 CDSSPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           C+  P +F    L   Y        A   FC M     +    S    +  L ++ ++  
Sbjct: 218 CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAV----SYTNLIHGLCEAGKLHE 273

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F+  MR +   P V T  +++ A C+ G    A+ +F  M   G  P+V TY  LI 
Sbjct: 274 ALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLID 333

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +G +  A+K  N M + G+ P+V+ FN LI  +CK+G + +A  +   M++  V P
Sbjct: 334 YLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCP 393

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TYN LI G+ +  + +   +L  +M+ + +  D++TYN LI GLC+ G    A+ L 
Sbjct: 394 NVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLF 453

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + ++   P+  T++A +   C       A Q+ +S+     + N+H +  L+  +C+ 
Sbjct: 454 RLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKA 513

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              + AA +   ML +   P+SI  + +  GL   GK + AM L   M
Sbjct: 514 GKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 149/327 (45%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  +Y  R    +A      M      P + + N+ +      + +D A+   
Sbjct: 359 SVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALL 418

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M  +++SP+V T N ++H  C++G+++ A  +F+ M   GF P   T+N  +   C  
Sbjct: 419 NKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRM 478

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A +    +++  ++ N   +  LI G+CK GK+  A  +F  M A    PN +T+
Sbjct: 479 GRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITF 538

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I+G  + G  +    L E+M +  +K  + TYN L+  + KE    +A  ++  L  
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +   PN  TY+A I   C +   E A ++   +   G   +  I+ +L++ +      D 
Sbjct: 599 SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDS 658

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGL 518
           A  VL  M      P  +  S L   L
Sbjct: 659 AFGVLRRMFGTGCEPSYLTYSILMKHL 685



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 139/345 (40%), Gaps = 30/345 (8%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +RD GF P   + N F+  L    RV  A    + ++   +  N +    ++  +CK G 
Sbjct: 457 IRD-GFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGK 515

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           IE A  +FK M +   +P+  T+N +I G   +G +  AM     M K  ++P + T+N 
Sbjct: 516 IEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNI 575

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+    K+     AN I + + ++   PNVVTY   I  Y   G  E    +  ++   G
Sbjct: 576 LVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEG 635

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           + +D   YN LI      G    A  +++ +      P+  TYS L+    + K+ +   
Sbjct: 636 VLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGS 695

Query: 459 Q-----------------------------LYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                                         L++ M   GC PN + +  L++  C+    
Sbjct: 696 NPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRL 755

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           + A  +   M E  ++P  II + L S     G    A+ L   M
Sbjct: 756 NVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSM 800



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 171/395 (43%), Gaps = 38/395 (9%)

Query: 141 ETHSIVLHILTKNRKFKSSE----SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           E H I+  +  K +  K++E    +++ G   +   +  + LF  +L     C  + + F
Sbjct: 483 EAHQILESL--KEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE--CLPNSITF 538

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +++        K ++A      M  +   P + + N  +  +L     D A      +  
Sbjct: 539 NVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLIS 598

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           +   PNV T    + A+C  G +E A E+   +++ G +     YN LI+ +   GLL  
Sbjct: 599 SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDS 658

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFC-KKGKLHEANRIFSEMKATNVS---------- 365
           A      M   G +P+ +T++ L+     +K K   +N +  ++  TN+S          
Sbjct: 659 AFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI 718

Query: 366 ------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
                             PN+ TY+ LING  +VG   +  SLY  M   GI    + +N
Sbjct: 719 DFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHN 778

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           +L+   CK G   +A  L+  + + S + +  +Y  LI G   + N E+A  ++ S++R 
Sbjct: 779 SLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRC 838

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           G   ++  +++L+    +    D+ +E LL ++EK
Sbjct: 839 GYNYDEVAWKVLIDGLAKTGYVDQCSE-LLNLMEK 872



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 85/384 (22%), Positives = 156/384 (40%), Gaps = 31/384 (8%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            +  L   Y    K  +A   F +M     LP   + N  +  L    +V  A+   ++M
Sbjct: 502 AYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  + P ++T N+++    K    +RA E+   + S G+ P+V TY   I  +C++G L
Sbjct: 562 AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +    ++  G+  +   +N LI  +   G L  A  +   M  T   P+ +TY+ L
Sbjct: 622 EEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681

Query: 375 -----INGYGQVGNSEMGAS------------------------LYEEMLRNGIKVDILT 405
                I  + + G++ +G                          L+E+M   G   ++ T
Sbjct: 682 MKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNT 741

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI GLCK G+   A  L   + +  + P+   +++L++  C       A  L  SM+
Sbjct: 742 YSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMM 801

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
                 +   +++L+    +  + ++A  V   +L      D +    L  GL   G  +
Sbjct: 802 ECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVD 861

Query: 526 LAMKLFRKMEIRG--LLPKGFDKL 547
              +L   ME  G  L P+ +  L
Sbjct: 862 QCSELLNLMEKNGCRLHPETYSML 885



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 141/345 (40%), Gaps = 54/345 (15%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F++ +RR+   P+    +   H+   L +  R +   +N+ +   I S T      S
Sbjct: 69  ALNFFRWIRRHHNFPHSLATH---HSLLLLLVRHRTLRAAENVRN-SMIKSCT------S 118

Query: 307 GHCNKGLLSLAMKFKNL------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            H    LL+L  +            +   + ++ ++N L+    +   + E   ++ EM 
Sbjct: 119 PHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEML 178

Query: 361 ATN---VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL------ 411
             N   V PN++T NT++N Y ++GN  +    +  +LR     D+ TY +L+L      
Sbjct: 179 TDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRND 238

Query: 412 -------------------------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                                    GLC+ GK  +A      + ++   P   TY+ L+ 
Sbjct: 239 DVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVC 298

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C       A  L+  M   GC PN + + +L+   C+    D A ++L EM+EK +AP
Sbjct: 299 ALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAP 358

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
             +  + L       G  E A+ +   ME + + P     +RT N
Sbjct: 359 SVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCP----NVRTYN 399



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 82/161 (50%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +F+ M   G +P++ TY+ LI+G C  G L++A    + M + GI P+ I  N+L+   C
Sbjct: 726 LFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCC 785

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K G   EA  +   M   +   ++ +Y  LI G  +  N E   +++  +LR G   D +
Sbjct: 786 KLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEV 845

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            +  LI GL K G   + + L+  ++KN    +  TYS L+
Sbjct: 846 AWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPETYSMLM 886



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 19/249 (7%)

Query: 165 GILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA---HRKKFRNATDTFCQMRD 221
           G+LDS +F +  ++F +       C+ S L + +L K      H+K+  N       + +
Sbjct: 654 GLLDS-AFGVLRRMFGT------GCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTN 706

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
                 I   N  + S +D     I    +++M      PN+ T + +++  CK+G +  
Sbjct: 707 ------ISVDNTDIWSKID---FGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNV 757

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  ++ +M   G  PS   +N+L+S  C  G+   A+   + M +     ++ ++  LI 
Sbjct: 758 AFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLIC 817

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G  ++    +A  +F  +     + + V +  LI+G  + G  +  + L   M +NG ++
Sbjct: 818 GLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRL 877

Query: 402 DILTYNALI 410
              TY+ L+
Sbjct: 878 HPETYSMLM 886


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+          ++ D +  S++ C   P ++ ++ +       FRN+      M  
Sbjct: 117 VVRGLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHA 174

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYK----------------------------- 252
            G      +CN  L+++ +   VD A+G  +                             
Sbjct: 175 KGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234

Query: 253 ------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                 EM R   +PN+ T N ++   C+ G+ ER  EV   M   G  P +  Y T+I 
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L +A +  N M   G++PNV+ +NT++ G C   +  EA  + SEM   +   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT+N L++ + Q G  +    L E+ML +G   D++TY  +I G CKEG   +A  L+
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +      PN  +Y+ ++ G C       A +L   MI+ GC PN   F  L++  C+ 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++A E+L +ML    +PD I  S +  GL   GK E A++L   M  +G+ P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 174/350 (49%), Gaps = 1/350 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M  YG  P +   N  L  L  +ER   A     EM +     +  T N+++ 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC+ G+++R +E+ + M S G +P V TY T+I+G C +GL+  A+     M   G +P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +++  ++ G C  G+  +A  + S+M      PN VT+NTLIN   + G  E    L 
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++ML NG   D+++Y+ +I GL K GKT++A  L+  +    + PN   YS++       
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +  Q++ ++  +  R +  ++  ++S+ C+  + DRA +    M+     P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI-NCAPENGEKE 560
           + L  GL   G  + A +L  ++  RG L K   +   I NC  ENG+++
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNCTQENGKQK 654



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y F P++         L    R+  AL    EM     +P     ++++ A C+ G    
Sbjct: 112 YTFFPVVRG-------LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +V V + M + G        N +++  C +G +  A+     +   G + +++++N ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +  EM   + +PN+VT+NTLI    + G  E    +  +M  +G   
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ ++ G C  +  + A +L 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M +  C  +   F +L+  FCQN   DR  E+L +ML     PD I  + + +G    
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 405 GLIDEAVMLLKSMSSCGCKP 424



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 164/376 (43%), Gaps = 52/376 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF---- 216
           +I+ GI      ++ +++ +  + SY +   + + ++ + K     ++++ A +      
Sbjct: 291 TIIDGICKEGHLEVANEILNR-MPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 217 ---CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
              C + D  F       N  +     +  VD  +   ++M  +   P+V T   V++ F
Sbjct: 349 QKDCPLDDVTF-------NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G+I+ AV + K+M S G  P+  +Y  ++ G C+ G    A +  + M + G  PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +TFNTLI   CKKG + +A  +  +M     SP++++Y+T+I+G G+ G +E    L   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 394 MLRNGI-----------------------------------KVDILTYNALILGLCKEGK 418
           M+  GI                                   + D + YNA+I  LCK  +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           T +A      +  N  +PN STY+ LI G      ++ A +L   +   G    KH+   
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGAL-RKHLMRH 640

Query: 479 LMSTFCQNEDFDRAAE 494
              + C  E+  +  E
Sbjct: 641 FGISNCTQENGKQKCE 656



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+   C  G I  A+EV   M   G  P    Y+ ++   C  G    ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G   +    N ++   C++G + EA  +  ++       ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L +EM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  ++   C  E +  A E+L E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M   G +P        IN
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 3/244 (1%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V  YN +++G+C  G L+ A +    +    + PN  TF  ++ G C +G++ +A  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM     +P    Y+ ++    + G       + E M   G  +D    N ++  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  L++ L       +  +Y+A++ G C+ K      +L   M+R  C PN   F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N  F+R  EVL +M E    PD  + + +  G+   G  E+A ++  +M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 538 GLLP 541
           GL P
Sbjct: 316 GLKP 319



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 121/275 (44%), Gaps = 7/275 (2%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V   N ++  +C+ G   +     +   ++   P+  T+  ++ G C +G ++ A++  +
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   G  P    ++ ++   C+ G    + R+   M A   + +    N ++N   + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L  ++   G + DI++YNA++ GLC   +      L+ ++ +    PN  T++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI   C     ER  ++   M   GC P+  ++  ++   C+    + A E+L  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 503 CMAPDSIILSELYSGLHHCGK----DELAMKLFRK 533
            + P+ +  + +  GL    +    +EL  ++F+K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 210/417 (50%), Gaps = 23/417 (5%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDS------FDLPSKLFDSILYSYR----- 187
           T  T+S +++ L    +F+++ +I   +L  DS      +++  K F SI Y  +     
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 188 --MCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
             M  + P    + ++++   Y  +    NA      M+  G      +    +S     
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            +++ A   + EM  + ISPNV T N +++ +  +  ++ A+ +F  M   G +PS  TY
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N +ISG      +S A  F   M K G+ PNVIT+ + I G CK G+   A +IF EMK 
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            +  PN+ TY++LI+G  Q G +E      E +L +G + ++ TY  L+ GLC +G+  +
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  LV+ + K  L P+   Y AL+ GQC     E A +++ SM+ +G +P    ++ L+ 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 482 TFCQNEDFDRAAEVLLE-MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
             C+  +F + A+ + + ML+K    D ++ + L  GL   G+ +L+++L   ME R
Sbjct: 732 ALCK-ANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 187/402 (46%), Gaps = 2/402 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   + + DL  ++FD ++     CD + + +  L        +   A D   +M 
Sbjct: 242 SLIIGHCKNGNLDLAFEMFDRMVKD--GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMI 299

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + +    + SL D+ R   A+    +M++    PNV T   ++    + G  E
Sbjct: 300 DKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFE 359

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ V+  M + G +P+  TY+ LI+    +G    A+     M  +   PN  T+N +I
Sbjct: 360 VAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVII 419

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC  G + +A  IF +M     SPNV+TYN +I+ Y + G       L E M  NG+K
Sbjct: 420 KGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLK 479

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D  TY  LI G  + GK + A  L  ++ ++ + PN  TY+A+I G       + A  L
Sbjct: 480 LDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALAL 539

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M+ SG  P+   + M++S F +      A     +M+++ + P+ I  +    GL  
Sbjct: 540 FWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCK 599

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            G+  LA K+F +M+ R   P        I+   + G+ E  
Sbjct: 600 NGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA 641



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 8/357 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   +  L    +   KF  A   + +M   G +P   + +  ++ L    R + 
Sbjct: 336 RGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFET 395

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++ M  +   PN  T N+++  FC +G I++A  +F  M   G  P+V TYN +I 
Sbjct: 396 ALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIH 455

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            +  +G ++ AM+   +M+ NG++ +  T+  LI GF + GKL  A  +F+EM    +SP
Sbjct: 456 IYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISP 515

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTYN +INGY  V   +   +L+ +M+ +G      TYN +I G  K  +  +A    
Sbjct: 516 NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFC 575

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + K  L+PN  TY++ I G C    +  AF+++  M +    PN   +  L+   CQ 
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQE 635

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
              + A  +L +  E    P+    + L  GL  CGK     A +L   M+ +GL P
Sbjct: 636 GQAEDAERLLDDGCE----PNVDTYTTLVRGL--CGKGRCYEADQLVESMKKKGLQP 686



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 127/494 (25%), Positives = 217/494 (43%), Gaps = 28/494 (5%)

Query: 62  NPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTP-FRVKHV--LLKVQK 118
           +P+ I   T P P     + V+     L    W++ + LS HL P  +  HV  LL    
Sbjct: 36  SPLSISSNTDPFP-----ELVSKISIILSSPTWERSSELS-HLIPKLKPHHVVNLLDTHN 89

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
           +    L FF WV         +     +L+ L ++R F  ++++   ++ S   +   K 
Sbjct: 90  NTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKR 149

Query: 179 FDSIL--------YSYRMCDSSPLVFDLLFKTYAHRKKFRN---ATDTFCQMRDYGFLPI 227
              +L        + Y +   S L+  L         KF       D + +M + G  P 
Sbjct: 150 VIQVLSEINTTYDFGYTLYSFSTLLIQL--------GKFDMDGLGRDVYIEMLNSGIRPN 201

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + + N  +  L +  +V  A      +      P+ +T   ++   CK G ++ A E+F 
Sbjct: 202 LFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFD 261

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P+  TY+ LI+G C++G L  AM     M   GI+P V  +   I   C  G
Sbjct: 262 RMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAG 321

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +  EA ++  +MK     PNV TY  LI+G  + G  E+   +Y +ML +G+    +TY+
Sbjct: 322 RSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYS 381

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           ALI  L  EG+ + A  + + +  +  +PN  TY+ +I G C     ++A  ++  M+++
Sbjct: 382 ALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA 441

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   + +++  + +    + A  +L  M    +  D+   + L SG    GK E A
Sbjct: 442 GPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHA 501

Query: 528 MKLFRKMEIRGLLP 541
             LF +M   G+ P
Sbjct: 502 FSLFNEMVEHGISP 515



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 157/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ + K   ++ K + A      +  YG  P   +    +     +  +D+A   +  M 
Sbjct: 205 FNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMV 264

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++   PN  T + +++  C  G +E A+++ + M   G  P+V  Y   I   C+ G   
Sbjct: 265 KDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSC 324

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K    M+K G  PNV T+  LI G  + GK   A  ++ +M A  + P  VTY+ LI
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALI 384

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N     G  E   +++E ML +    +  TYN +I G C  G  +KA  +   + K    
Sbjct: 385 NQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS 444

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ +I     +     A +L + M  +G + +   +  L+S F +    + A  +
Sbjct: 445 PNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSL 504

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM+E  ++P+ +  + + +G     K + A+ LF KM   G +P
Sbjct: 505 FNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVP 550



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 8/288 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   Y    K  +A   F +M + G +P   + N  +S    + R+  A  F  +
Sbjct: 518 VTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGK 577

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + PNV T    +   CK G    A ++F  M+   + P++ TY++LI G C +G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQ 637

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A +  +    +G +PNV T+ TL+ G C KG+ +EA+++   MK   + P+   Y  
Sbjct: 638 AEDAERLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRA 693

Query: 374 LINGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           L+   GQ  N E+ ++L  ++ M+  G +  +  Y ALI  LCK    +KA  + + + K
Sbjct: 694 LL--VGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLK 751

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
                +   ++ L+ G      ++ + +L   M    C  N     ML
Sbjct: 752 KHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVML 799



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 8/269 (2%)

Query: 176 SKLFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           +K+ D++   ++M +S    S   ++++   ++   +   A +   +M   G LP + + 
Sbjct: 531 AKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITY 590

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
             F+  L  + R  +A   + EM++    PN+ T + ++   C+ G  E A  +  +   
Sbjct: 591 TSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD--- 647

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+V TY TL+ G C KG    A +    M+K G+QP+   +  L+ G CK  ++  
Sbjct: 648 -GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVES 706

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A +IF  M  T   P +  Y  LI    +    +    +++ ML+     D + +  L+ 
Sbjct: 707 ALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLD 766

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           GL KEG+T  +  L+  ++  +   N  T
Sbjct: 767 GLLKEGETDLSLELLHVMESRNCTLNFQT 795



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 98/217 (45%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           +F+TL+    K         ++ EM  + + PN+ T+N +I      G  +    +   +
Sbjct: 169 SFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHI 228

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G   D  TY +LI+G CK G    A  +   + K+   PN+ TYSALI G C     
Sbjct: 229 FHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRL 288

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E A  + + MI  G  P  H + + + + C       A ++L +M ++   P+    + L
Sbjct: 289 EEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTAL 348

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            SGL   GK E+A+ ++ KM   GL+P        IN
Sbjct: 349 ISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALIN 385



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 78/205 (38%), Gaps = 18/205 (8%)

Query: 198 LLFKTYAHRKK---------FRNATDTFCQ---------MRDYGFLPIIESCNKFLSSLL 239
           L FK +   KK         + +  D  CQ         + D G  P +++    +  L 
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLC 664

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
              R   A    + M++  + P+      ++   CK   +E A+++F +M + GF P ++
Sbjct: 665 GKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLS 724

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y  LI   C       A      M K     + + +  L+ G  K+G+   +  +   M
Sbjct: 725 DYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVM 784

Query: 360 KATNVSPNVVTYNTLINGYGQVGNS 384
           ++ N + N  T   L      +G S
Sbjct: 785 ESRNCTLNFQTRVMLARELSALGCS 809


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 212/448 (47%), Gaps = 31/448 (6%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS----------------- 159
           Q   V +LEFF  +  + PS   + T+++++    KN     +                 
Sbjct: 362 QDKLVSALEFFDKMNENGPSPNRV-TYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVF 420

Query: 160 --ESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTF 216
              S++RG L  +S +  SKLFD  +     CD ++   ++ L        K   AT  +
Sbjct: 421 IVNSLIRGFLKVESREEASKLFDEAV----ACDIANIFTYNSLLSWLCKEGKMSEATTLW 476

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M D G  P   S N  +        +D+A   + +M    + PNV T +++M  + K 
Sbjct: 477 QKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKN 536

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVIT 335
           G  E A  VF  M     +PS  TYN  I+G C  G  S A    K  +EK G  P  +T
Sbjct: 537 GDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK-GFVPVCLT 595

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N+++ GF K+G +  A   + EM  + VSPNV+TY TLING+ +  N+++   +  EM 
Sbjct: 596 YNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMR 655

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+++DI  Y ALI G CK+   + A++L  +L    L PN+  Y++LI+G     N E
Sbjct: 656 NKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNME 715

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L K M+  G   +   +  L+    +      A ++  EM  K + PD II + L 
Sbjct: 716 AALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLI 775

Query: 516 SGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           +GL  CGK +L  A K+  +ME   + P
Sbjct: 776 NGL--CGKGQLENAQKILAEMERDSITP 801



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 170/371 (45%), Gaps = 6/371 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDT 215
           S  S++ G     + D+ + +F  +L     C   P  + + +L   Y        A   
Sbjct: 490 SYNSMILGHCRQGNLDMAASVFSDMLD----CGLKPNVITYSILMDGYFKNGDTEYAFYV 545

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M D   +P   + N  ++ L    R   A    K+       P   T N +M  F K
Sbjct: 546 FDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIK 605

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +  A+  ++ M   G  P+V TY TLI+G C      LA+K +N M   G++ ++  
Sbjct: 606 EGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAA 665

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  LI GFCKK  +  A+ +FSE+    +SPN V YN+LI+GY  + N E   +L + ML
Sbjct: 666 YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             GI  D+ TY  LI GL KEG+   A  L  ++    ++P+   Y+ LI G C +   E
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++   M R    PN  I+  L++   +  +   A  +  EML+K + P+      L 
Sbjct: 786 NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845

Query: 516 SGLHHCGKDEL 526
           +G    G   L
Sbjct: 846 NGKIKGGNSAL 856



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 128/543 (23%), Positives = 232/543 (42%), Gaps = 44/543 (8%)

Query: 40  TLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFV-NIAYSHLIHSDWKKLT 98
           +L   P F  P+  ++S+  N      P+ +  E   QD +F  N+ +      +  K  
Sbjct: 23  SLCSQPQF--PNEPQSSLYQN----SYPNFSYAEKNSQDSNFSENLIFLKSRQVELTKPA 76

Query: 99  ALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK-FK 157
           +  + L    V   LL  ++D   +L +F  ++  +    +L++  ++LHILT++ +  K
Sbjct: 77  SQDSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLDSLCVLLHILTRSSETLK 136

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLLFKTYAHRKKFRNATDT 215
            ++++L   +  DS  +P+ L D  + S +  D  S   +++ L  +Y    K  +A   
Sbjct: 137 QAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGC 196

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F ++ +   +P I+  N  L++L+ ++ +  A   Y++M    +  + +T++++M A  K
Sbjct: 197 FNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLK 256

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
               E A + F   +S G       Y+ +I   C    + LA      M   G  P+  T
Sbjct: 257 DNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGT 316

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F ++I    K+G + EA R+  EM +  V  NVV   TL+ GY +          +++M 
Sbjct: 317 FTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMN 376

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP------------------- 436
            NG   + +TY  LI   CK G   KA  L   +   ++ P                   
Sbjct: 377 ENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESRE 436

Query: 437 ---------------NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
                          N  TY++L++  C       A  L++ M+  G  P K  +  ++ 
Sbjct: 437 EASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMIL 496

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  + D AA V  +ML+  + P+ I  S L  G    G  E A  +F +M    ++P
Sbjct: 497 GHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVP 556

Query: 542 KGF 544
             F
Sbjct: 557 SDF 559



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 152/323 (47%), Gaps = 1/323 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MRD G++P   +    + + +    +  AL    EM    +  NV     ++  +CK   
Sbjct: 305 MRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDK 364

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+E F  M   G  P+  TY  LI   C  G ++ A      M+   I P V   N+
Sbjct: 365 LVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNS 424

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI GF K     EA+++F E  A +++ N+ TYN+L++   + G      +L+++ML  G
Sbjct: 425 LIRGFLKVESREEASKLFDEAVACDIA-NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG 483

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +    ++YN++ILG C++G    AA +  D+    L PN  TYS L+ G     ++E AF
Sbjct: 484 LAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAF 543

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            ++  M+     P+   + + ++  C+      A ++L + +EK   P  +  + +  G 
Sbjct: 544 YVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGF 603

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G    A+  +R+M   G+ P
Sbjct: 604 IKEGSVSSALTAYREMCESGVSP 626


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 187/380 (49%), Gaps = 2/380 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATD 214
           KS  ++L  ++    FDL  + ++ ++ S    +  P  L F+L+ K          A +
Sbjct: 137 KSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVDQAVE 196

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F  M D   +    + +  +  L +  R+D A+    EM+     PN    N+++ A C
Sbjct: 197 VFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALC 256

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G + RA ++  NM   G +P+  TYN+L+ G C KG L  AM   N M  N   PN I
Sbjct: 257 KKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDI 316

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TF TL+ GF K G+  +  R+   ++      N  +Y++LI+G  + G  E G  L++EM
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  G K + + Y+ALI GLC+EGK  +A   + ++      PN+ TYS+L+ G     + 
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +A  ++K M  + C  ++  + +L++  C+N     A  V  +ML + +  D +  S +
Sbjct: 437 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 496

Query: 515 YSGLHHCGKDELAMKLFRKM 534
             G  +    E  MKLF +M
Sbjct: 497 IHGFCNAQLVEQGMKLFNQM 516



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 177/409 (43%), Gaps = 81/409 (19%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLV---FDLLFKTYAHRKKFRNATDTFCQM-RDYGF 224
           S+S D  S   + +L+  + C++   +   F ++FK Y      + A D F +M  ++  
Sbjct: 76  SNSLDFTS--LEQLLHQMK-CENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEFHC 132

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEM----RRNRISPNVYTLNMVMHAFCKLGIIE 280
              ++S N  L+ ++     D+AL FY  +      + I PN  + N+V+ A C++G ++
Sbjct: 133 KQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGNVD 192

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +AVEVF+ M         +  N +  G+                          T++TL+
Sbjct: 193 QAVEVFRGM---------SDRNCVADGY--------------------------TYSTLM 217

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C +G++ EA  +  EM+     PN V +N LI+   + G+    + L + M   G  
Sbjct: 218 HGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCV 277

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST-------------------- 440
            + +TYN+L+ GLC +GK  KA  L+  +  N  VPN  T                    
Sbjct: 278 PNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRV 337

Query: 441 ---------------YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
                          YS+LI+G       E   QL+K M+  GC+PN  ++  L+   C+
Sbjct: 338 LVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCR 397

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               D A E L+EM  K   P+S   S L  G    G    A+ ++++M
Sbjct: 398 EGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEM 446



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 4/351 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+ +    D    L D +         +P+ F++L      +     A+     M 
Sbjct: 215 TLMHGLCNEGRIDEAVSLLDEMQVEGTF--PNPVAFNVLISALCKKGDLSRASKLVDNMF 272

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +  L    ++D A+     M  N+  PN  T   ++  F K G   
Sbjct: 273 LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 332

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             V V  ++E  G+  +  +Y++LISG   +G     M+    M + G +PN I ++ LI
Sbjct: 333 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 392

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GK  EA     EMK    +PN  TY++L+ GY + G+      +++EM  N   
Sbjct: 393 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN 452

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
              + Y+ LI GLCK GK K+A  + K +    +  +   YS++I G C  +  E+  +L
Sbjct: 453 HHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKL 512

Query: 461 YKSMI--RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +  M+      +P+   + +L++ FC      RA ++L  ML++   PD I
Sbjct: 513 FNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 563



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 145/279 (51%), Gaps = 5/279 (1%)

Query: 268 MVMHAFCKLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKGLLSLAMKFKN-LME 325
           ++  A+ K  + ++A+++F  M +      +V ++NT+++    +G   LA++F N +++
Sbjct: 105 IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVID 164

Query: 326 KNG---IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            N    IQPN ++FN +I   C+ G + +A  +F  M   N   +  TY+TL++G    G
Sbjct: 165 SNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEG 224

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +   SL +EM   G   + + +N LI  LCK+G   +A+ LV ++     VPN  TY+
Sbjct: 225 RIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN 284

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +L+ G C++   ++A  L   M+ + C PN   F  L+  F ++        VL+ + EK
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +    S L SGL   GK E  M+L+++M  +G  P
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKP 383



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 23/255 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P     +  +  L    + D A  +  EM+    +PN +T + +M  + + G
Sbjct: 375 EMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAG 434

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I +A+ V+K M           Y+ LI+G C  G L  A+     M   GI+ +V+ ++
Sbjct: 435 DIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYS 494

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           ++I GFC    + +  ++F++M   N  + P+VVTYN L+N +    +      +   ML
Sbjct: 495 SMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTML 554

Query: 396 RNGIKVDILT---------------------YNALILGLCKEGKTKKAAYLVKDLDKNSL 434
             G   D +T                      + L++ L K  +T  A+ +++ + +  L
Sbjct: 555 DQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFL 614

Query: 435 VPNASTYSALITGQC 449
           +P  ST++  +   C
Sbjct: 615 LPKPSTWALAVQQLC 629



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + + +L        K + A   + QM   G    + + +  +    +++ V+  +
Sbjct: 451 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 510

Query: 249 GFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
             + +M     ++ P+V T N++++AFC    + RA+++   M   G  P   T +  +
Sbjct: 511 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 569


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 157/296 (53%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + FC+M   G +P   + +  ++              Y+ M+R+ I PN Y  N ++ 
Sbjct: 212 AKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +C  G++++A +VF  M   G    V TYN LI G C       A+K  + + K G+ P
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N++T+N LI GFC  GK+  A R+F+++K++ +SP +VTYNTLI GY +V N      L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM    I    +TY  LI    +   T+KA  +   ++K+ LVP+  TYS LI G CV 
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            N + A +L+KS+     +PN  I+  ++  +C+     RA  +L EM+   M P+
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 188/376 (50%), Gaps = 3/376 (0%)

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           ++ S+ FD    +F+  L S  + D+    F ++ K       F         + ++G  
Sbjct: 134 LIRSNYFDKAWWIFNE-LKSKVVLDAYS--FGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +      +        V +A   + +M R  + PN +T +++M+ F K G+     ++
Sbjct: 191 PNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           ++NM+  G +P+   YN LIS +CN G++  A K    M + GI   V+T+N LI G C+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             K  EA ++  ++    +SPN+VTYN LING+  VG  +    L+ ++  +G+   ++T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVT 370

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI G  K      A  LVK++++  + P+  TY+ LI        +E+A +++  M 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLME 430

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           +SG  P+ + + +L+   C + +   A+++   + E  + P+S+I + +  G    G   
Sbjct: 431 KSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 526 LAMKLFRKMEIRGLLP 541
            A++L  +M   G++P
Sbjct: 491 RALRLLNEMVHSGMVP 506



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 162/316 (51%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +P  + +L   +  +   R     +  M+  G +P   + N  +S   +   VD A   +
Sbjct: 227 NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVF 286

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EMR   I+  V T N+++   C+      AV++   +  +G  P++ TYN LI+G C+ 
Sbjct: 287 AEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDV 346

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A++  N ++ +G+ P ++T+NTLI G+ K   L  A  +  EM+   ++P+ VTY
Sbjct: 347 GKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+ + ++  +E    ++  M ++G+  D+ TY+ LI GLC  G  K+A+ L K L +
Sbjct: 407 TILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGE 466

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L PN+  Y+ +I G C   +S RA +L   M+ SG  PN   F   +   C++E +  
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKE 526

Query: 492 AAEVLLEMLEKCMAPD 507
           A  +L +M+   + P 
Sbjct: 527 AELLLGQMINSGLKPS 542



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 9/404 (2%)

Query: 142 THSIVL---HILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS-YRMCDSSPLVFD 197
           +HSI     H+L+     ++   ILR I    S  +PS L   +  + +  C +   ++D
Sbjct: 38  SHSISFILNHLLSSGMLPQAQSLILRLI----SGRIPSSLMLQLTQAHFTPCLTYTPLYD 93

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            +   Y H      A      M   G +P+  + N  +  L+ S   D A   + E++ +
Sbjct: 94  TIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNELK-S 152

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           ++  + Y+  +++   C+ G   +   +   +E  G  P+V  Y TLI G C  G + LA
Sbjct: 153 KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLA 212

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 M++ G+ PN  T++ L+ GF K+G   E  +++  MK + + PN   YN LI+ 
Sbjct: 213 KNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y   G  +    ++ EM   GI   ++TYN LI GLC+  K  +A  LV  ++K  L PN
Sbjct: 273 YCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ LI G C     + A +L+  +  SG  P    +  L++ + + E+   A +++ 
Sbjct: 333 IVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EM E+C+AP  +  + L          E A ++   ME  GL+P
Sbjct: 393 EMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVP 436



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 151/284 (53%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y +      A   F +MR+ G    + + N  +  L   ++   A+    ++ 
Sbjct: 266 YNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +SPN+ T N++++ FC +G ++ AV +F  ++S G  P++ TYNTLI+G+     L+
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     ME+  I P+ +T+  LI  F +     +A  + S M+ + + P+V TY+ LI
Sbjct: 386 GALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G    GN +  + L++ +    ++ + + YN +I G CKEG + +A  L+ ++  + +V
Sbjct: 446 HGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           PN +++ + I   C  +  + A  L   MI SG +P+  +++M+
Sbjct: 506 PNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 6/212 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++ G  D    D   +LF+ +    +    SP  + ++ L   Y+  +    A D   +M
Sbjct: 339 LINGFCDVGKMDTAVRLFNQL----KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            +    P   +    + +       + A   +  M ++ + P+VYT ++++H  C  G +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNM 454

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A ++FK++  M   P+   YNT+I G+C +G    A++  N M  +G+ PNV +F + 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCST 514

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           I   C+  K  EA  +  +M  + + P+V  Y
Sbjct: 515 IGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 1/174 (0%)

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+T++N Y    +++   +    M+  G      T+N L+  L +     KA ++  +L 
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL- 150

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K+ +V +A ++  +I G C      + F+L   +   G  PN  I+  L+   C+  +  
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVM 210

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            A  +  +M    + P+    S L +G    G      +++  M+  G++P  +
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264


>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 486

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 216/451 (47%), Gaps = 26/451 (5%)

Query: 74  PKGQDLDFVNIAYSHLIH----SDWKKLTAL----STHLTPFRVKHVLLKVQKDYVLSLE 125
           P   D   +    S LIH    S W  L +L    +  LTP     ++L ++ +  L+L 
Sbjct: 27  PPSSDQQLITTITSLLIHHRSKSRWTHLRSLILTSNKTLTPTHFSQIILLLKSNPRLALR 86

Query: 126 FFTWVQTHKPS--SLTLETHSIVLHILTKNRKFKSSESILR-----GILDSDSFDLPSKL 178
           FF +     PS  S  L + S + HIL++ R    ++SI+       +L  DS     K 
Sbjct: 87  FFHFT-LRNPSFCSHDLRSISTITHILSRARLKPQAQSIIHLAFTSPVLVDDSNGQALKF 145

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           F+ ++ +YR CDS+P VFDLL K+    KK  +       +R  G  P+I +CN  +S +
Sbjct: 146 FEILVKTYRECDSAPFVFDLLIKSCLELKKIDDGLKIVRLLRSRGISPLISTCNFLVSWV 205

Query: 239 LDSERVDIALGFYKEM---------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
              +      G ++E+         R  ++ PNV+T N +M  F + G +E   EV+  M
Sbjct: 206 SKCKGCYAGYGVFREVFEVNDNEGKRVIKVRPNVHTFNELMMGFYRDGELEMVEEVWSEM 265

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           E    +P+  +Y+ L++   + G      K    M   GI+ +V+ +NT+I GFCK G++
Sbjct: 266 ERFECVPNGFSYSVLMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIGEI 325

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  +  EM+   V  N VT+  LINGY  VG+ +    +++ M+R G + +    + L
Sbjct: 326 EKAEELSREMELNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMDVL 385

Query: 410 ILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           I GLC++ +  +A  +++   +N     +  +Y  LI G C     + A +L   M+  G
Sbjct: 386 IGGLCEKRRVSEALEIMRIAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVGGG 445

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
             PN  I+   +  + +  + + AA +  EM
Sbjct: 446 FEPNFEIYGAFIDGYMKLGNEEMAAMLRKEM 476


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 9/322 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YG  PI+E        L  ++R+D AL   +EM    I P+ +  N V+   C+   +E 
Sbjct: 12  YG--PIVER-------LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F+ M      P+V TYNTLI+G C    +  A +    M   G  P  +++NTLI 
Sbjct: 63  ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFCKK  L  A  +F +M  +N  PNVVTY TLI+G  + G  +  A + + M++ G+  
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++ TY+ LI G CK  +  +A  L++ +    + P   TY+ L+   C     E AF+L+
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M +  C P    +  L+   C ++  D A  +  EM+ K   PD+I    L  GL   
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302

Query: 522 GKDELAMKLFRKMEIRGLLPKG 543
           GK   A +L  KM++    P G
Sbjct: 303 GKVHEAQELMEKMKLTKRNPFG 324



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 155/313 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R      L +  + +     K+  +A  T  +M   G  P     N  LS L   E+V+ 
Sbjct: 3   RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +++M + RI+PNV T N +++  CK   IE A E+FK M   G++P+  +YNTLI 
Sbjct: 63  ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C K  L  A    + M ++   PNV+T+ TLI G  K GK+  A  +   M    V+P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY+ LI+G+ +V   +    L E+M+  GI   ++TYN L+  LC+  K + A  L 
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + +    P   TY+ L+   C  K  + A +LY  MI  GC P+   ++ L     + 
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302

Query: 487 EDFDRAAEVLLEM 499
                A E++ +M
Sbjct: 303 GKVHEAQELMEKM 315



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 2/209 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G            +FD ++ S   C  + + +  L    +   K + A +   
Sbjct: 116 SYNTLIDGFCKKKDLVAAKDVFDKMVRSN--CVPNVVTYTTLIDGLSKSGKVQAAAEVLD 173

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P + + +  +       RVD A    ++M    I+P V T N+++++ C+  
Sbjct: 174 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 233

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A ++F+ M      P+V TYNTL+   C+   L  A +    M   G  P+ IT++
Sbjct: 234 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 293

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           TL +G  + GK+HEA  +  +MK T  +P
Sbjct: 294 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+          ++ D +  S++ C   P ++ ++ +       FRN+      M  
Sbjct: 117 VVRGLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHA 174

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYK----------------------------- 252
            G      +CN  L+++ +   VD A+G  +                             
Sbjct: 175 KGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234

Query: 253 ------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                 EM R   +PN+ T N ++   C+ G+ ER  EV   M   G  P +  Y T+I 
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L +A +  N M   G++PNV+ +NT++ G C   +  EA  + SEM   +   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT+N L++ + Q G  +    L E+ML +G   D++TY  +I G CKEG   +A  L+
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +      PN  +Y+ ++ G C       A +L   MI+ GC PN   F  L++  C+ 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++A E+L +ML    +PD I  S +  GL   GK E A++L   M  +G+ P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 164/331 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M  YG  P +   N  L  L  +ER   A     EM +     +  T N+++ 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC+ G+++R +E+ + M S G +P V TY T+I+G C +GL+  A+     M   G +P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +++  ++ G C  G+  +A  + S+M      PN VT+NTLIN   + G  E    L 
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++ML NG   D+++Y+ +I GL K GKT++A  L+  +    + PN   YS++       
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +  Q++ ++  +  R +  ++  ++S+ C+  + DRA +    M+     P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           + L  GL   G  + A +L  ++  RG L K
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRK 635



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y F P++         L    R+  AL    EM     +P     ++++ A C+ G    
Sbjct: 112 YTFFPVVRG-------LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +V V + M + G        N +++  C +G +  A+     +   G + +++++N ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +  EM   + +PN+VT+NTLI    + G  E    +  +M  +G   
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ ++ G C  +  + A +L 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M +  C  +   F +L+  FCQN   DR  E+L +ML     PD I  + + +G    
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 405 GLIDEAVMLLKSMSSCGCKP 424



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 51/350 (14%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF---- 216
           +I+ GI      ++ +++ +  + SY +   + + ++ + K     ++++ A +      
Sbjct: 291 TIIDGICKEGHLEVANEILNR-MPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 217 ---CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
              C + D  F       N  +     +  VD  +   ++M  +   P+V T   V++ F
Sbjct: 349 QKDCPLDDVTF-------NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G+I+ AV + K+M S G  P+  +Y  ++ G C+ G    A +  + M + G  PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +TFNTLI   CKKG + +A  +  +M     SP++++Y+T+I+G G+ G +E    L   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 394 MLRNGI-----------------------------------KVDILTYNALILGLCKEGK 418
           M+  GI                                   + D + YNA+I  LCK  +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           T +A      +  N  +PN STY+ LI G      ++ A +L   +   G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+   C  G I  A+EV   M   G  P    Y+ ++   C  G    ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G   +    N ++   C++G + EA  +  ++       ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L +EM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  ++   C  E +  A E+L E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M   G +P        IN
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 3/244 (1%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V  YN +++G+C  G L+ A +    +    + PN  TF  ++ G C +G++ +A  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM     +P    Y+ ++    + G       + E M   G  +D    N ++  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  L++ L       +  +Y+A++ G C+ K      +L   M+R  C PN   F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N  F+R  EVL +M E    PD  + + +  G+   G  E+A ++  +M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 538 GLLP 541
           GL P
Sbjct: 316 GLKP 319



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 121/275 (44%), Gaps = 7/275 (2%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V   N ++  +C+ G   +     +   ++   P+  T+  ++ G C +G ++ A++  +
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   G  P    ++ ++   C+ G    + R+   M A   + +    N ++N   + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L  ++   G + DI++YNA++ GLC   +      L+ ++ +    PN  T++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI   C     ER  ++   M   GC P+  ++  ++   C+    + A E+L  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 503 CMAPDSIILSELYSGLHHCGK----DELAMKLFRK 533
            + P+ +  + +  GL    +    +EL  ++F+K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 189/415 (45%), Gaps = 37/415 (8%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+          ++ D +  S++ C   P ++ ++ +       FRN+      M  
Sbjct: 117 VVRGLCTRGRIADALEVLDEM--SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHA 174

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYK----------------------------- 252
            G      +CN  L+++ +   VD A+G  +                             
Sbjct: 175 KGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGD 234

Query: 253 ------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                 EM R   +PN+ T N ++   C+ G+ ER  EV   M   G  P +  Y T+I 
Sbjct: 235 VEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIID 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L +A +  N M   G++PNV+ +NT++ G C   +  EA  + SEM   +   
Sbjct: 295 GICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPL 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT+N L++ + Q G  +    L E+ML +G   D++TY  +I G CKEG   +A  L+
Sbjct: 355 DDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLL 414

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +      PN  +Y+ ++ G C       A +L   MI+ GC PN   F  L++  C+ 
Sbjct: 415 KSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKK 474

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++A E+L +ML    +PD I  S +  GL   GK E A++L   M  +G+ P
Sbjct: 475 GLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 164/331 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M  YG  P +   N  L  L  +ER   A     EM +     +  T N+++ 
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC+ G+++R +E+ + M S G +P V TY T+I+G C +GL+  A+     M   G +P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +++  ++ G C  G+  +A  + S+M      PN VT+NTLIN   + G  E    L 
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 484

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++ML NG   D+++Y+ +I GL K GKT++A  L+  +    + PN   YS++       
Sbjct: 485 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSRE 544

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +  Q++ ++  +  R +  ++  ++S+ C+  + DRA +    M+     P+    
Sbjct: 545 GRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 604

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           + L  GL   G  + A +L  ++  RG L K
Sbjct: 605 TMLIKGLASEGLAKEAQELLSELCSRGALRK 635



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y F P++         L    R+  AL    EM     +P     ++++ A C+ G    
Sbjct: 112 YTFFPVVRG-------LCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRN 164

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +V V + M + G        N +++  C +G +  A+     +   G + +++++N ++ 
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +  EM   + +PN+VT+NTLI    + G  E    +  +M  +G   
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ ++ G C  +  + A +L 
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M +  C  +   F +L+  FCQN   DR  E+L +ML     PD I  + + +G    
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 405 GLIDEAVMLLKSMSSCGCKP 424



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 155/350 (44%), Gaps = 51/350 (14%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF---- 216
           +I+ GI      ++ +++ +  + SY +   + + ++ + K     ++++ A +      
Sbjct: 291 TIIDGICKEGHLEVANEILNR-MPSYGL-KPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 217 ---CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
              C + D  F       N  +     +  VD  +   ++M  +   P+V T   V++ F
Sbjct: 349 QKDCPLDDVTF-------NILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGF 401

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G+I+ AV + K+M S G  P+  +Y  ++ G C+ G    A +  + M + G  PN 
Sbjct: 402 CKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNP 461

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +TFNTLI   CKKG + +A  +  +M     SP++++Y+T+I+G G+ G +E    L   
Sbjct: 462 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 521

Query: 394 MLRNGI-----------------------------------KVDILTYNALILGLCKEGK 418
           M+  GI                                   + D + YNA+I  LCK  +
Sbjct: 522 MVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWE 581

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           T +A      +  N  +PN STY+ LI G      ++ A +L   +   G
Sbjct: 582 TDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/293 (23%), Positives = 124/293 (42%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+   C  G I  A+EV   M   G  P    Y+ ++   C  G    ++
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G   +    N ++   C++G + EA  +  ++       ++V+YN ++ G 
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L +EM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  ++   C  E +  A E+L E
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M   G +P        IN
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN 399



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 113/244 (46%), Gaps = 3/244 (1%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V  YN +++G+C  G L+ A +    +    + PN  TF  ++ G C +G++ +A  +  
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM     +P    Y+ ++    + G       + E M   G  +D    N ++  +C++G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  L++ L       +  +Y+A++ G C+ K      +L   M+R  C PN   F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C+N  F+R  EVL +M E    PD  + + +  G+   G  E+A ++  +M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 538 GLLP 541
           GL P
Sbjct: 316 GLKP 319



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/275 (20%), Positives = 121/275 (44%), Gaps = 7/275 (2%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V   N ++  +C+ G   +     +   ++   P+  T+  ++ G C +G ++ A++  +
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M   G  P    ++ ++   C+ G    + R+   M A   + +    N ++N   + G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L  ++   G + DI++YNA++ GLC   +      L+ ++ +    PN  T++
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI   C     ER  ++   M   GC P+  ++  ++   C+    + A E+L  M   
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 503 CMAPDSIILSELYSGLHHCGK----DELAMKLFRK 533
            + P+ +  + +  GL    +    +EL  ++F+K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 189/353 (53%), Gaps = 3/353 (0%)

Query: 147 LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           +H LT   + +S+ ++ + ++ +   +   +  +S++Y   + D  P     L + +   
Sbjct: 76  IHSLTNFEEIESNNNLSK-LVRNGELEEGFRFLESMVYRGDIPDIIPCTS--LIRGFCKI 132

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            K R AT     + D G +P + + N  +S +  + R   A     +M R   SP+V T 
Sbjct: 133 GKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTF 192

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N++++  C+ G++ RA++V + M   G  P+  +YN L+ G C +  +  A+++   M  
Sbjct: 193 NILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTS 252

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P+++T+NTL+   CK GK+  A  + +++ +   SP ++TYNT+I+G  +VG ++ 
Sbjct: 253 RGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQ 312

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            A L +EM   G+K DI+TY++L+ GL +EGK  +A     DL+   + PNA TY+A++ 
Sbjct: 313 AAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIML 372

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           G C  + ++RA      M++ GC+P +  + +L+           A E+L E+
Sbjct: 373 GLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/320 (28%), Positives = 156/320 (48%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P I  C   +       +   A    + +  +   P+V T N+++   C  G    A
Sbjct: 114 GDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDA 173

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++  +M   G  PSV T+N LI+  C KGLL  A+     M K+G  PN +++N L+ G
Sbjct: 174 EKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHG 233

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCK+ K+  A     +M +    P++VTYNTL+    + G  +    L  ++   G    
Sbjct: 234 FCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPV 293

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TYN +I GL K GKT +AA L+ ++    L P+  TYS+L+ G       + A + + 
Sbjct: 294 LITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFH 353

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            +   G +PN   +  +M   C+    DRA + L  M+++   P     + L  GL + G
Sbjct: 354 DLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEG 413

Query: 523 KDELAMKLFRKMEIRGLLPK 542
             + A++L  ++ +RG++ K
Sbjct: 414 LAKEALELLNELCLRGVVKK 433



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 141/275 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L        ++ +A      M   G  P + + N  ++ L     +  A+   ++
Sbjct: 155 ITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEK 214

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M ++  +PN  + N ++H FCK   +ERA+E    M S G  P + TYNTL++  C  G 
Sbjct: 215 MPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGK 274

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  N +   G  P +IT+NT+I G  K GK  +A ++  EM+A  + P+++TY++
Sbjct: 275 VDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSS 334

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ G  + G  +     + ++   G+K + +TYNA++LGLCK  KT +A   +  + +  
Sbjct: 335 LVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRG 394

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
             P  ++Y+ LI G      ++ A +L   +   G
Sbjct: 395 CKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  S + F++L      +     A D   +M  +G  P   S N  L      ++++ 
Sbjct: 183 RGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMER 242

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ +  +M      P++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I 
Sbjct: 243 AIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVID 302

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G    A K  + M   G++P++IT+++L+ G  ++GK+ EA + F +++   V P
Sbjct: 303 GLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKP 362

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N +TYN ++ G  +   ++        M++ G K    +Y  LI GL  EG  K+A  L+
Sbjct: 363 NAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELL 422

Query: 427 KDLDKNSLVPNAST 440
            +L    +V  +S 
Sbjct: 423 NELCLRGVVKKSSA 436



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 2/169 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L  +      D   +L + +  S + C    + ++ +    +   K   A     +MR
Sbjct: 264 TLLTALCKDGKVDAAVELLNQL--SSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMR 321

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + +  +  L    +VD A+ F+ ++    + PN  T N +M   CK    +
Sbjct: 322 AKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTD 381

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           RA++    M   G  P+  +Y  LI G   +GL   A++  N +   G+
Sbjct: 382 RAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/374 (29%), Positives = 181/374 (48%), Gaps = 35/374 (9%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y H     +A  +F +M      P I    K L+S+   +R    L   ++M    I  N
Sbjct: 49  YLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHN 108

Query: 263 VYTLNMVMHAFCKL-----------------------------------GIIERAVEVFK 287
           VYTLN+++++FC L                                   G I  A+ +F 
Sbjct: 109 VYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFD 168

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   GF P V  Y TLI+G C  G  S A++    MEK   QP+V+ + TLI   CK  
Sbjct: 169 KMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +  +A  +FSEM    +SPN+VT N+L+     +G  +   +L  EM+ + I  + ++  
Sbjct: 229 QQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLT 288

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            ++  LCKEG   +A  +V  + ++ + P+  TY+ALI G C+R   + A +++  M+  
Sbjct: 289 TVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC PN   +  L++ +C+ E  D+A  +  EM  + + P+++  + L  GL H G+ + A
Sbjct: 349 GCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDA 408

Query: 528 MKLFRKMEIRGLLP 541
           + LFR+M   G +P
Sbjct: 409 IALFREMVACGQIP 422



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 172/350 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +V+  L  +    ++   A + F +M   G  P I +CN  + +L +        
Sbjct: 210 CQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVN 269

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I PN  +L  V+ A CK G++ +A +V   M   G  P V TY  LI GH
Sbjct: 270 TLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  ++M   G  PNV ++NTLI G+CK  ++ +A  +F EM    + PN 
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+G   VG  +   +L+ EM+  G   D++TY  L+  LCK     KA  L+K 
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ ++L P+   Y+ +I G C     E A  L+ ++   G +PN   + ++    C+   
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            D A ++ +EM E   + D    + +  G     +   A++L  +M  RG
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 202/455 (44%), Gaps = 27/455 (5%)

Query: 107 FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGI 166
           FR K++      D + S  F   +  H P S+     + +L  +TK +++ +  S+ R +
Sbjct: 45  FRSKYLHFNTLDDALSS--FNRMLHMHPPPSIV--DFAKILTSITKVKRYSTVLSLSRKM 100

Query: 167 LDSDSFDLPSKLF------DSILYSYRM--------------CDSSPLVFDLLFKTYAHR 206
              DSF +P  ++      +S  +  R+              C      F  L K     
Sbjct: 101 ---DSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            +   A   F +M   GF P +      ++ L  +     A+   + M +    P+V   
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
             ++H+ CK     +A  +F  M + G  P++ T N+L+   CN G         N M  
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           + I PN I+  T++   CK+G + +A+ +   M  + V P+VVTY  LI+G+      + 
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              +++ M+  G   ++ +YN LI G CK  +  KA YL +++ +  L+PN  TY+ LI 
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     + A  L++ M+  G  P+   + +L+   C+N   D+A  +L  +    + P
Sbjct: 398 GLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDP 457

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D  I + +  G+   G+ E A  LF  +  +GL P
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKP 492



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 123/252 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   +  R +   A   F  M   G  P + S N  ++     ER+D A+  ++E
Sbjct: 320 VTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEE 379

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R ++ PN  T N ++H  C +G ++ A+ +F+ M + G IP + TY  L+   C    
Sbjct: 380 MCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCH 439

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  AM     +E + + P++  +  +I G C+ G+L +A  +FS + +  + PNV TYN 
Sbjct: 440 LDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNI 499

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           + +G  + G  +    L+ EM  N    D  TYN +  G  +  +T +A  L++++    
Sbjct: 500 MTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARG 559

Query: 434 LVPNASTYSALI 445
              + ST + L+
Sbjct: 560 FSCDVSTTTLLV 571



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 105/227 (46%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ F  ++    K  +      +  +M +  +  NV T N LIN +  +       S+
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             ++L+ G + D  ++  LI GLC EG+  +A +L   +      P+   Y+ LI G C 
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             ++  A +L +SM +  C+P+  ++  L+ + C++    +A  +  EM+ K ++P+ + 
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + L   L + G+ +    L  +M    ++P        ++   + G
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEG 298


>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
          Length = 586

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 183/346 (52%), Gaps = 18/346 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVM 270
           A++  C++  Y +       NK +SSL+   RV   +  ++   ++R+ SP+V++ N+V+
Sbjct: 209 ASEFGCRVEAYAY-------NKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVI 261

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
              C++G +++A+E+ + M   G  P   T+N ++ G C    +S   +    ++++G+ 
Sbjct: 262 KGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVC 321

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PNV+TF ++I G+CK GKL +A  ++++M A+ + PN VTYN LINGYG+VG+      
Sbjct: 322 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 381

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y++M R     D++T+++LI G C+ G+   A  +  D+ ++ + PN  T+S +I   C
Sbjct: 382 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 441

Query: 450 VRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +  S+ A  L   + +R    P   I+  ++   C+    D A  +   M EK   PD 
Sbjct: 442 KQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 501

Query: 509 IILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINC 552
              + L  G  +C K  +  A+  F +M   G  P       T+NC
Sbjct: 502 YTYTILIIG--YCMKSRISEAIMFFHEMVEAGCSPDSI----TVNC 541



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 25/263 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPL------ 194
           TH+I++  L +  +      +LR  L  D   +P+ + F S++  Y  C +  L      
Sbjct: 291 THNIIVDGLCRTNEVSRGHEVLRR-LQRDGVCMPNVVTFTSVISGY--CKAGKLEDAMAV 347

Query: 195 --------------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                          +++L   Y       +A + + QM      P + + +  +     
Sbjct: 348 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 407

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-PSVT 299
             ++D AL  + +M ++RI PNVYT ++++H+ CK    + A+ +   +     I P   
Sbjct: 408 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAF 467

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +I   C  G +  A   +  ME+ G +P+  T+  LI G+C K ++ EA   F EM
Sbjct: 468 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 527

Query: 360 KATNVSPNVVTYNTLINGYGQVG 382
                SP+ +T N  I+   + G
Sbjct: 528 VEAGCSPDSITVNCFISCLLKAG 550


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 183/380 (48%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F    ++ D +    + C  + + ++++        +  +A +   ++  
Sbjct: 217 LLEAVCKSTGFGQAMEVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 274

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P   S    L  L  ++R +     + EM      PN  T +M++  FC+ G++ER
Sbjct: 275 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V + M   G   + T  N +I+  C +G +  A +F N M   G  P+ I++ T++ 
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 394

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+  +  +A  +  EM   N  PN VT+NT I    Q G  E    L E+M  +G +V
Sbjct: 395 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I+TYNAL+ G C +G+   A  L   +      PN  TY+ L+TG C  +  + A +L 
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELL 511

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++  C PN   F +L+S FCQ    D A E++ +M+E    P+ I  + L  G+   
Sbjct: 512 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 571

Query: 522 GKDELAMKLFRKMEIRGLLP 541
              E A++L   +   G+ P
Sbjct: 572 CNSEEALELLHGLVSNGVSP 591



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+RG+ D         L D +L+  R C  S + + +L +       F  A +   +MR 
Sbjct: 182 IIRGLCDRGRVGEALSLLDDMLH--RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + N  ++ +    RVD A  F   +      P+  +   V+   C     E 
Sbjct: 240 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 299

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             E+F  M     +P+  T++ L+   C  G++  A++    M  +G   N    N +I 
Sbjct: 300 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 359

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             CK+G++ +A +  + M +   SP+ ++Y T++ G  +    E    L +EM+R     
Sbjct: 360 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 419

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +T+N  I  LC++G  ++A  L++ + ++    N  TY+AL+ G CV+   + A +L+
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM    C+PN   +  L++  C  E  D AAE+L EML+K  AP+ +  + L S     
Sbjct: 480 YSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 536

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A++L  +M   G  P
Sbjct: 537 GLMDEAIELVEQMMEHGCTP 556



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + PII         L D  RV  AL    +M      P+V T  +++ A CK     +
Sbjct: 177 YTYTPIIRG-------LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 229

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+EV   M + G  P++ TYN +I+G C +G +  A +F N +   G QP+ +++ T++ 
Sbjct: 230 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 289

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM   N  PN VT++ L+  + + G  E    + E+M  +G   
Sbjct: 290 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 349

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C  +  E A +L 
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+R  C PN+  F   +   CQ    ++A  ++ +M E     + +  + L +G    
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 522 GKDELAMKLFRKM 534
           G+ + A++LF  M
Sbjct: 470 GRVDSALELFYSM 482



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 3/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  T   + +  +A      M  YG  P   S    L  L  +ER + A 
Sbjct: 347 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 406

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM R    PN  T N  +   C+ G+IE+A  + + M   G   ++ TYN L++G 
Sbjct: 407 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 466

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++    M     +PN IT+ TL+ G C   +L  A  + +EM   + +PNV
Sbjct: 467 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 523

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L++ + Q G  +    L E+M+ +G   +++TYN L+ G+ K+  +++A  L+  
Sbjct: 524 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 583

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L  N + P+  TYS++I         E A +++  +   G RP   I+  ++   C+  +
Sbjct: 584 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCN 643

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            D A +    M+     P+ +    L  GL +    +    L R++  RG+L K
Sbjct: 644 TDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNK 697



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 147/312 (47%), Gaps = 3/312 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +  C K + +L    R   A    +   R+  + +V+  N ++  +C+ G ++ A
Sbjct: 104 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA 163

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +   + SM   P   TY  +I G C++G +  A+   + M   G QP+V+T+  L+  
Sbjct: 164 RRL---IASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEA 220

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK     +A  +  EM+A   +PN+VTYN +ING  + G  +        +   G + D
Sbjct: 221 VCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPD 280

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            ++Y  ++ GLC   + +    L  ++ + + +PN  T+  L+   C     ERA Q+ +
Sbjct: 281 TVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLE 340

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   GC  N  +  ++++T C+    D A + L  M     +PD+I  + +  GL    
Sbjct: 341 QMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAE 400

Query: 523 KDELAMKLFRKM 534
           + E A +L ++M
Sbjct: 401 RWEDAKELLKEM 412



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+VY    ++   C+ G    A  V +  E  G    V  YNTL++G+C  G L  A  
Sbjct: 106 APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA-- 163

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            + L+    + P+  T+  +I G C +G++ EA  +  +M      P+VVTY  L+    
Sbjct: 164 -RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 222

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +         + +EM   G   +I+TYN +I G+C+EG+   A   +  L      P+  
Sbjct: 223 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ ++ G C  K  E   +L+  M+   C PN+  F+ML+  FC+    +RA +VL +M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A ++ + + + + +   G+ + A +    M   G  P
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 384



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ YT   ++   C  G +  A+ +  +M   G  PSV TY  L+   C       AM
Sbjct: 172 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 231

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G  PN++T+N +I G C++G++ +A    + + +    P+ V+Y T++ G 
Sbjct: 232 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 291

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 E    L+ EM+      + +T++ L+   C+ G  ++A  +++ +  +    N 
Sbjct: 292 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 351

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +  + +I   C +   + AFQ   +M   GC P+   +  ++   C+ E ++ A E+L E
Sbjct: 352 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 411

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           M+ K   P+ +  +     L   G  E A  L  +M   G
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 32/190 (16%)

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK----------NS 433
           S   A L +     G   D+     LI  LC+ G+T  AA +++  ++          N+
Sbjct: 90  SPRAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 149

Query: 434 LV----------------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           LV                      P+A TY+ +I G C R     A  L   M+  GC+P
Sbjct: 150 LVAGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   + +L+   C++  F +A EVL EM  K   P+ +  + + +G+   G+ + A +  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 532 RKMEIRGLLP 541
            ++   G  P
Sbjct: 270 NRLSSYGFQP 279


>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
          Length = 414

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 183/346 (52%), Gaps = 18/346 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVM 270
           A++  C++  Y +       NK +SSL+   RV   +  ++   ++R+ SP+V++ N+V+
Sbjct: 37  ASEFGCRVEAYAY-------NKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVI 89

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
              C++G +++A+E+ + M   G  P   T+N L+ G C    +S   +    ++++G+ 
Sbjct: 90  KGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVC 149

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PNV+TF ++I G+CK GKL +A  ++++M A+ + PN VTYN LINGYG+VG+      
Sbjct: 150 MPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVE 209

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y++M R     D++T+++LI G C+ G+   A  +  D+ ++ + PN  T+S +I   C
Sbjct: 210 VYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLC 269

Query: 450 VRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +  S+ A  L   + +R    P   I+  ++   C+    D A  +   M EK   PD 
Sbjct: 270 KQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDK 329

Query: 509 IILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINC 552
              + L  G  +C K  +  A+  F +M   G  P       T+NC
Sbjct: 330 YTYTILIIG--YCMKSRISEAIMFFHEMVEAGCSPDSI----TVNC 369



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           RD   +P + +    +S    + +++ A+  Y +M  + I PN  T N++++ + K+G +
Sbjct: 145 RDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDL 204

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             AVEV++ M  +   P V T+++LI G+C  G L  A++  + M ++ IQPNV TF+ +
Sbjct: 205 GSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSII 264

Query: 340 IFGFCKK------------------------------------GKLHEANRIFSEMKATN 363
           I   CK+                                    GK+ EAN I   M+   
Sbjct: 265 IHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKG 324

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+  TY  LI GY            + EM+  G   D +T N  I  L K G   +  
Sbjct: 325 CRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVD 384

Query: 424 YLVK 427
           ++++
Sbjct: 385 HVMR 388



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 113/257 (43%), Gaps = 25/257 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDSSPL------ 194
           TH+I++  L +  +      +LR  L  D   +P+ + F S++  Y  C +  L      
Sbjct: 119 THNILVDGLCRTNEVSRGHEVLRR-LQRDGVCMPNVVTFTSVISGY--CKAGKLEDAMAV 175

Query: 195 --------------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
                          +++L   Y       +A + + QM      P + + +  +     
Sbjct: 176 YNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCR 235

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-PSVT 299
             ++D AL  + +M ++RI PNVYT ++++H+ CK    + A+ +   +     I P   
Sbjct: 236 CGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAF 295

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +I   C  G +  A   +  ME+ G +P+  T+  LI G+C K ++ EA   F EM
Sbjct: 296 IYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEM 355

Query: 360 KATNVSPNVVTYNTLIN 376
                SP+ +T N  I+
Sbjct: 356 VEAGCSPDSITVNCFIS 372



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 1/169 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F  L   Y    +  +A   +  M  +   P + + +  + SL    R D A+
Sbjct: 219 CPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEAI 278

Query: 249 GFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           G   E+  R  I+P  +  N V+   CK G ++ A  + K ME  G  P   TY  LI G
Sbjct: 279 GLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGMEEKGCRPDKYTYTILIIG 338

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +C K  +S A+ F + M + G  P+ IT N  I    K G  +E + + 
Sbjct: 339 YCMKSRISEAIMFFHEMVEAGCSPDSITVNCFISCLLKAGMPNEVDHVM 387


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 176/355 (49%)

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
            + K+F    D F ++ + GF        K + + +  + + + + F   MR+  + PNV
Sbjct: 152 VNEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNV 211

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           +  N+++   C+   I  A ++F  M ++  + S+ TYNTLI G+C  G L  A K +  
Sbjct: 212 FIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRER 271

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M++  + PN+ITFN+L+ G CK  K+ EA  +  EM+     P+  TY+ L +G  +  +
Sbjct: 272 MKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDD 331

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                 LYE+    GI+++  T + L+ GLCK+GK +KA  ++K   +N LV +   Y+ 
Sbjct: 332 GNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNT 391

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
            + G C   +  +A    + M   G RPN   F  L+  FC  ++ D+A E + +M EK 
Sbjct: 392 FVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKG 451

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + P     + L  G       +   ++  +ME  G+ P        INC  ++G+
Sbjct: 452 VTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGK 506



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 177/348 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L       +K + A     +M   GF+P   + +     LL  +  + A+  Y++
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                I  N YT +++++  CK G +E+A E+ K     G +     YNT ++G+C  G 
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A+     ME  G++PN ITFN+LI  FC   ++ +A     +M    V+P+V TYNT
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GYG++   +    + E+M   G+K ++++Y +LI  LCK+GK  +A  +++D+    
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++PNA  Y+ LI G C+    + A + +  M+RS   P    + +L+   C+      A 
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L ++     +PD I  + L SG  + G     + L+  M+  G+ P
Sbjct: 582 DFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKP 629



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 145/286 (50%), Gaps = 5/286 (1%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D  C+    G LP  +  N  +       +V  AL F+ EM R+ ISP + T N+++   
Sbjct: 516 DMICR----GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGL 571

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G +  A +    + S G  P V TYN+LISG+ N G +S  +     M+  GI+P V
Sbjct: 572 CKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTV 631

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T++ LI G C K  +    ++++EM   N+ P+ V YN +I+ Y ++GN++   SL++ 
Sbjct: 632 RTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQG 690

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ML  GI  D +TYN+LILG  +EGK      LV ++    L P A TY  L+ G C  K+
Sbjct: 691 MLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKD 750

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              A+  Y+ M+ +   PN  I   L +   Q         +  EM
Sbjct: 751 FSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEM 796



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 195/423 (46%), Gaps = 30/423 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM-CDSSPLVFDL-- 198
           T + +L  L K RK K + S+L+  ++ + F +P     SIL+   + CD      +L  
Sbjct: 283 TFNSLLSGLCKMRKMKEARSLLKE-MEVNGF-MPDGYTYSILFDGLLRCDDGNGAMELYE 340

Query: 199 ----------------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                           L      + K   A +   +  + G +      N F++      
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            ++ A+   + M    + PN  T N ++  FC +  +++A E  K M   G  PSV TYN
Sbjct: 401 DMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYN 460

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLI G+          +    ME+ G++PNV+++ +LI   CK GK+ EA  +  +M   
Sbjct: 461 TLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICR 520

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V PN   YN LI+G   VG  +     ++EM+R+ I   ++TYN LI GLCK+GK  +A
Sbjct: 521 GVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              +  +  +   P+  TY++LI+G     N  +   LY++M   G +P    +  L+S 
Sbjct: 581 EDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISG 640

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC----GKDELAMKLFRKMEIRG 538
            C  E  +   ++  EML+  + PD ++    Y+ + HC    G  + A  L + M  +G
Sbjct: 641 -CSKEGIELVEKLYNEMLQMNLLPDRVV----YNAMIHCYAEIGNTQKAYSLHQGMLDQG 695

Query: 539 LLP 541
           + P
Sbjct: 696 IHP 698



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 202/460 (43%), Gaps = 51/460 (11%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKL 178
           T K   +   T SI+L+ L K  K + +E IL+   ++             + +     +
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402

Query: 179 FDSILYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
             +IL   RM       + + F+ L   +   K+   A +   +M + G  P +E+ N  
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +         D      ++M    + PNV +   +++  CK G I  A  V ++M   G 
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+   YN LI G C  G +  A++F + M ++ I P ++T+N LI G CKKGKL EA  
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNS------------------------------ 384
             +++ ++  SP+V+TYN+LI+GY   GN                               
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS 642

Query: 385 ----EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
               E+   LY EML+  +  D + YNA+I    + G T+KA  L + +    + P+  T
Sbjct: 643 KEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMT 702

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y++LI G            L  +M      P    +++L+   C  +DF  A     EM+
Sbjct: 703 YNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMV 762

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           E    P++ I +EL +GL   G+ +    +  +M ++G++
Sbjct: 763 ENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGII 802



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 151/323 (46%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR  G  P +   N  +  L   +R+  A   + EM    +  ++ T N ++  +CK+G 
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGE 261

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A ++ + M+     P++ T+N+L+SG C    +  A      ME NG  P+  T++ 
Sbjct: 262 LDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSI 321

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L  G  +    + A  ++ +     +  N  T + L+NG  + G  E    + ++   NG
Sbjct: 322 LFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENG 381

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  D + YN  + G C+ G   KA   ++ ++   L PN+ T+++LI   C  K  ++A 
Sbjct: 382 LVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAE 441

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +  K M   G  P+   +  L+  + +   FDR  ++L +M E  + P+ +    L + L
Sbjct: 442 EWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCL 501

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              GK   A  + R M  RG+LP
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLP 524



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/242 (24%), Positives = 112/242 (46%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +T  + L+S  C   +L  A++    M ++G  P++++ + L      + +  +   +F 
Sbjct: 106 ITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFM 165

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E++ +    +   Y   I    ++ N +MG    + M + G++ ++  YN LI GLC+E 
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           + + A  +  ++   +LV +  TY+ LI G C     + AF++ + M      PN   F 
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFN 285

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+S  C+      A  +L EM      PD    S L+ GL  C     AM+L+ +   +
Sbjct: 286 SLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEK 345

Query: 538 GL 539
           G+
Sbjct: 346 GI 347


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 184/380 (48%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F    ++ D +    + C  + + ++++        +  +A +   ++  
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P   S    L  L  ++R +     + EM      PN  T +M++  FC+ G++ER
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V + M   G   + T  N +I+  C +G +  A +F N M   G  P+ I++ T++ 
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+  +  +A  +  EM   N  PN VT+NT I    Q G  E    L E+M  +G +V
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I+TYNAL+ G C +G+   A  L   +      PN  TY+ L+TG C  +  + A +L 
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELL 480

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++  C PN   F +L+S FCQ    D A E++ +M+E    P+ I  + L  G+ + 
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITND 540

Query: 522 GKDELAMKLFRKMEIRGLLP 541
              E A++L   +   G+ P
Sbjct: 541 CNSEEALELLHGLVSNGVSP 560



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+RG+ D         L D +L+  R C  S + + +L +       F  A +   +MR 
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLH--RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + N  ++ +    RVD A  F   +      P+  +   V+   C     E 
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             E+F  M     +P+  T++ L+   C  G++  A++    M  +G   N    N +I 
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             CK+G++ +A +  + M +   SP+ ++Y T++ G  +    E    L +EM+R     
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +T+N  I  LC++G  ++A  L++ + ++    N  TY+AL+ G CV+   + A +L+
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM    C+PN   +  L++  C  E  D AAE+L EML+K  AP+ +  + L S     
Sbjct: 449 YSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A++L  +M   G  P
Sbjct: 506 GLMDEAIELVEQMMEHGCTP 525



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + PII         L D  RV  AL    +M      P+V T  +++ A CK     +
Sbjct: 146 YTYTPIIRG-------LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+EV   M + G  P++ TYN +I+G C +G +  A +F N +   G QP+ +++ T++ 
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM   N  PN VT++ L+  + + G  E    + E+M  +G   
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C  +  E A +L 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+R  C PN+  F   +   CQ    ++A  ++ +M E     + +  + L +G    
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 522 GKDELAMKLFRKM 534
           G+ + A++LF  M
Sbjct: 439 GRVDSALELFYSM 451



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  T   + +  +A      M  YG  P   S    L  L  +ER + A 
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM R    PN  T N  +   C+ G+IE+A  + + M   G   ++ TYN L++G 
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++    M     +PN IT+ TL+ G C   +L  A  + +EM   + +PNV
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L++ + Q G  +    L E+M+ +G   +++TYN L+ G+  +  +++A  L+  
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHG 552

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L  N + P+  TYS++I         E A +++  +   G RP   I+  ++   C+  +
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCN 612

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            D A +    M+     P+ +    L  GL +    +    L R++  RG+L K  
Sbjct: 613 TDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNKNL 668



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 3/344 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SSP   +   +    R     A     +    G  P +  C K + +L    R   A   
Sbjct: 41  SSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARV 100

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            +   R+  + +V+  N ++  +C+ G ++ A  +   + SM   P   TY  +I G C+
Sbjct: 101 LRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCD 157

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G +  A+   + M   G QP+V+T+  L+   CK     +A  +  EM+A   +PN+VT
Sbjct: 158 RGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 217

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN +ING  + G  +        +   G + D ++Y  ++ GLC   + +    L  ++ 
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           + + +PN  T+  L+   C     ERA Q+ + M   GC  N  +  ++++T C+    D
Sbjct: 278 EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            A + L  M     +PD+I  + +  GL    + E A +L ++M
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+VY    ++   C+ G    A  V +  E  G    V  YNTL++G+C  G L  A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA-- 132

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            + L+    + P+  T+  +I G C +G++ EA  +  +M      P+VVTY  L+    
Sbjct: 133 -RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +         + +EM   G   +I+TYN +I G+C+EG+   A   +  L      P+  
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ ++ G C  K  E   +L+  M+   C PN+  F+ML+  FC+    +RA +VL +M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A ++ + + + + +   G+ + A +    M   G  P
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ YT   ++   C  G +  A+ +  +M   G  PSV TY  L+   C       AM
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G  PN++T+N +I G C++G++ +A    + + +    P+ V+Y T++ G 
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 E    L+ EM+      + +T++ L+   C+ G  ++A  +++ +  +    N 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +  + +I   C +   + AFQ   +M   GC P+   +  ++   C+ E ++ A E+L E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           M+ K   P+ +  +     L   G  E A  L  +M   G
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 3/135 (2%)

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           NA +  L       +AA LV         P+    + LI   C R  +  A ++ ++  R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SG   +   +  L++ +C+    D A  ++  M    +APD+   + +  GL   G+   
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 527 AMKLFRKMEIRGLLP 541
           A+ L   M  RG  P
Sbjct: 164 ALSLLDDMLHRGCQP 178


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 180/325 (55%), Gaps = 4/325 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           ++D G  P +      +     +  ++ A  F+ +M    +  N YT  ++++   K G+
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            +   ++F+ M+  G  P++ TYN L++ +C +G +  A    + M + G++ NV+T+NT
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNT 307

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G C++ ++ EA ++  +MK   VSPN++TYNTLI G+  VGN +  +SL +++  NG
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   ++TYN LI G  K G  K  A L ++++   + P+  T + LI      +  E+AF
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q+Y SM + G  P+ +++ +L+   C   +   ++++   M E  + P  +I + +  G 
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHG- 486

Query: 519 HHCGKDE--LAMKLFRKMEIRGLLP 541
            +C +D    A++L R+ME +GL+P
Sbjct: 487 -YCKEDNSYRALRLLREMEAKGLVP 510



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/285 (34%), Positives = 156/285 (54%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +++M+ N + PN+YT N +M+ +C  G I RA ++F  M   G   +V TYNTLI G C
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMC 313

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  +  A K  + M+K  + PN+IT+NTLI GFC  G L +A+ +  ++K+  +SP++V
Sbjct: 314 REERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLV 373

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN LI GY + GN +  A L  EM   GI    +T   LI    +  + +KA  +   +
Sbjct: 374 TYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSM 433

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           +K  LVP+   Y  LI G C++ N + + +L++SM      P+  I+  ++  +C+ ++ 
Sbjct: 434 EKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNS 493

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            RA  +L EM  K + P+    S +   L   GK E A  L  KM
Sbjct: 494 YRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 152/303 (50%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           ++  D F +M+  G  P + + N  ++      ++  A   + EMR   +  NV T N +
Sbjct: 249 KDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTL 308

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +   C+   +  A ++   M+     P++ TYNTLI G C+ G L  A    + ++ NG+
Sbjct: 309 IGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGL 368

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+++T+N LI G+ K G       +  EM+   +SP+ VT   LI+ Y ++   E    
Sbjct: 369 SPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQ 428

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +Y  M + G+  D+  Y  LI GLC +G  K+++ L + + +  + P+   Y+ +I G C
Sbjct: 429 IYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYC 488

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
              NS RA +L + M   G  PN   +  ++   C++  ++ A  +L +M+E  + P + 
Sbjct: 489 KEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSAS 548

Query: 510 ILS 512
           IL+
Sbjct: 549 ILN 551



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 6/313 (1%)

Query: 167 LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP 226
           L  D FDL  K+  + L+       +   ++ L   Y    K   A D F +MR+ G   
Sbjct: 247 LKKDGFDLFEKMKINGLFP------NLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEA 300

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            + + N  +  +   ERV  A     +M++  +SPN+ T N ++  FC +G +++A  + 
Sbjct: 301 NVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLL 360

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             ++S G  PS+ TYN LI G+   G           ME  GI P+ +T   LI  + + 
Sbjct: 361 DQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRL 420

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            ++ +A +I+S M+   + P+V  Y  LI+G    GN +  + L+  M    ++   + Y
Sbjct: 421 QEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIY 480

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I G CKE  + +A  L+++++   LVPN ++YS++I   C     E A  L   MI 
Sbjct: 481 NTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIE 540

Query: 467 SGCRPNKHIFEML 479
              +P+  I  M+
Sbjct: 541 LQLKPSASILNMI 553



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/374 (24%), Positives = 155/374 (41%), Gaps = 55/374 (14%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH----------- 271
           GF     S +  L  LLD  ++  A     ++  N+IS   +T+  ++H           
Sbjct: 32  GFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMT 91

Query: 272 ----------AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL----------------- 304
                     A  K  ++++A+  F  M   G +     +N+L                 
Sbjct: 92  TALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFF 151

Query: 305 -----------------ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
                            I G C  G L  + +   L++  G+ PNV+ + TLI G CK G
Sbjct: 152 NELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            +  A   F +M    +  N  T+  LING  + G  + G  L+E+M  NG+  ++ TYN
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+   C EGK  +A  L  ++ +  +  N  TY+ LI G C  +    A +L   M ++
Sbjct: 272 CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA 331

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
              PN   +  L+  FC   + D+A+ +L ++    ++P  +  + L  G    G  +  
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGV 391

Query: 528 MKLFRKMEIRGLLP 541
             L R+ME RG+ P
Sbjct: 392 ADLAREMEGRGISP 405



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 17/216 (7%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG-ASLYEEMLRNGIKVDILTY 406
           KL  A  +  ++ +  +S    T  +L++   Q  N  M  A LYE ++   +K  +L  
Sbjct: 52  KLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLL-- 109

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
                         KA     ++    LV   + +++L+ G  VR N      L+ + ++
Sbjct: 110 -------------DKALIFFNEMVDKGLVFRPNIFNSLL-GSLVRSNCFEKAWLFFNELK 155

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
              + + + F +++   C+N + D++ ++L  + +  ++P+ +I + L  G    G  E 
Sbjct: 156 ERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIER 215

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           A   F KM   GL+   +     IN   + G K+ G
Sbjct: 216 ARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDG 251


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 189/400 (47%), Gaps = 21/400 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++++L  + +N  F+ + ++L  +                    + C  + + ++++  
Sbjct: 180 TYTVLLEAMCRNSGFEQAMAVLDEM------------------RAKGCTPNIVTYNVIIN 221

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 +  +A +   ++  YGF P   S    L  L  S+R D     + EM      P
Sbjct: 222 GMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 281

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  T +M++  FC+ G++ERA++V + M   G   + T  N +I+  C +G +  A K  
Sbjct: 282 NEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLL 341

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M   G  P+ I++ T++ G C+  +  +A  + +EM   N  PN VT+NT I    Q 
Sbjct: 342 NDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQK 401

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  E    L E+M  +G  V ++TYNAL+ G C +G    A  L + +      PN  TY
Sbjct: 402 GLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITY 458

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + L+TG C  +  + A +L   M+R  C PN   F +L+S FCQ    + A E++ +M+E
Sbjct: 459 TTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMME 518

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               P+ I  + L  G+      E A++L   +  +G+ P
Sbjct: 519 HGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSP 558



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P+I         L D  RV  AL    +M R    PNV T  +++ A C+    E+
Sbjct: 144 YTYTPLIRV-------LCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQ 196

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ V   M + G  P++ TYN +I+G C +G +  A +  N +   G QP+ +++ TL+ 
Sbjct: 197 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLK 256

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM   N  PN VT++ LI  + + G  E    + E+M  +G   
Sbjct: 257 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCAT 316

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A  L+ D+      P+  +Y+ ++ G C  +  + A +L 
Sbjct: 317 NTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELL 376

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R+ C PN+  F   +   CQ    ++A  ++ +M E       +  + L +G    
Sbjct: 377 NEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQ 436

Query: 522 GKDELAMKLFRKM 534
           G  + A++LFR M
Sbjct: 437 GHIDSALELFRSM 449



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 166/354 (46%), Gaps = 3/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  +   + +  +A      M  YG  P   S    L  L  +ER D A 
Sbjct: 314 CATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAK 373

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM RN   PN  T N  +   C+ G+IE+A+ + + M   G    V TYN L++G 
Sbjct: 374 ELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGF 433

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++    M     +PN IT+ TL+ G C   +L  A  + +EM   +  PNV
Sbjct: 434 CVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNV 490

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L++ + Q G  E    L E+M+ +G   +++TYN L+ G+ K+  ++ A  L+  
Sbjct: 491 VTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHG 550

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+  T+S++I         E A QL+  +   G RP   ++  ++   C+  +
Sbjct: 551 LVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCE 610

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            D A +    M+     P+      L  GL H G  + A  L   +  RG+L K
Sbjct: 611 IDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNK 664



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 183/398 (45%), Gaps = 45/398 (11%)

Query: 185 SYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           + R+  S P+  D      L +    R +  +A      M   G  P + +    L ++ 
Sbjct: 130 ARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMC 189

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +   + A+    EMR    +PN+ T N++++  C+ G ++ A E+   + S GF P   
Sbjct: 190 RNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTV 249

Query: 300 TYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC-------------- 344
           +Y TL+ G C +K    +   F  +MEKN + PN +TF+ LI  FC              
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCM-PNEVTFDMLIRFFCRGGMVERAIQVLEQ 308

Query: 345 ---------------------KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
                                K+G++ +A ++ ++M +   +P+ ++Y T++ G  +   
Sbjct: 309 MTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAER 368

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +    L  EM+RN    + +T+N  I  LC++G  ++A  L++ + ++       TY+A
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNA 428

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           L+ G CV+ + + A +L++SM    C+PN   +  L++  C  E  D AAE++ EML   
Sbjct: 429 LVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGD 485

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             P+ +  + L S     G  E A++L  +M   G  P
Sbjct: 486 CPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTP 523



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 145/312 (46%), Gaps = 3/312 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +  C K + +L    R   A    +    +    +V+  N ++  +C+ G ++ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +     SM   P   TY  LI   C++G ++ A+   + M + G QPNV+T+  L+  
Sbjct: 131 RRLIG---SMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+     +A  +  EM+A   +PN+VTYN +ING  + G  +    L   +   G + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            ++Y  L+ GLC   +      L  ++ + + +PN  T+  LI   C     ERA Q+ +
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLE 307

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   GC  N  +  +++++ C+    D A ++L +M      PD+I  + +  GL    
Sbjct: 308 QMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAE 367

Query: 523 KDELAMKLFRKM 534
           + + A +L  +M
Sbjct: 368 RWDDAKELLNEM 379



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 5/223 (2%)

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +G  P+V     LI   C++G+  +A R+    + +    +V  YNTL+ GY + G+ + 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L   M    +  D  TY  LI  LC  G+   A  L+ D+ +    PN  TY+ L+ 
Sbjct: 130 ARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C     E+A  +   M   GC PN   + ++++  C+    D A E+L  +      P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GFDKL 547
           D++  + L  GL    + +   +LF +M  +  +P    FD L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 181/380 (47%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +        +  ++ + F +M+D G  P I + N  +     S R   A    +E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISPNV T N +++AF K G    A E++  M   G IP+  TYN++I G C +  
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  P+V TF TLI G+C   ++ +   +  EM    +  N VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK------ 427
           LI+G+  VG+      L ++M+ +G+  DI+T N L+ GLC  GK K A  + K      
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 428 -DLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            DLD     N + P+  TY+ LI G         A +LY+ M   G  P+   +  ++  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++ + M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 614 AIIYITLIYGFRKVGNINGA 633



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 168/354 (47%), Gaps = 11/354 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    KF  A + + +M   G +P   + N  +      +R+D A   +  
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V+T   ++  +C    I+  +E+   M   G + +  TYNTLI G C  G 
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT----------- 362
           L+ A+     M  +G+ P+++T NTL+ G C  GKL +A  +F  M+ +           
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+V+TYN LI G    G       LYEEM   GI  D +TY+++I GLCK+ +  +A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   +   S  PN  T++ LI G C     +   +L+  M R G   +  I+  L+  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           F +  + + A ++  EM+   + PD+I +  + +G     + E A+ +   +++
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQM 677



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 167/376 (44%), Gaps = 40/376 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   G  P + +    L  L    RV  AL  + ++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
           R    P+V T   +M+  C+ G +  AV +   M   G  P   TY T + G C  G   
Sbjct: 179 R----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 313 -LLSLAMKFKNL--------------------------------MEKNGIQPNVITFNTL 339
             L+L  K + +                                M+  GI PN++T+N +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  G+   A R+  EM    +SPNVVTYN LIN + + G     A LY+EML  GI
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             + +TYN++I G CK+ +   A  +   +      P+  T++ LI G C  K  +   +
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M R G   N   +  L+  FC   D + A ++  +M+   + PD +  + L  GL 
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 520 HCGKDELAMKLFRKME 535
             GK + A+++F+ M+
Sbjct: 475 DNGKLKDALEMFKAMQ 490



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +   NK + +++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +G  P V T+ TL+ G C    +S A+   + +  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +P+V+TF TL+ G C++G++ EA  +   M    + P+ +TY T ++G  ++G++  
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + IK +++ Y+A+I GLCK+G+   +  L  ++    + PN  TY+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C+      A +L + M+     PN   +  L++ F +   F  AAE+  EML + + 
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 506 PDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
           P++I  + +  G   C +D L  A  +F  M  +G  P  F
Sbjct: 356 PNTITYNSMIDGF--CKQDRLDAAEDMFYLMATKGCSPDVF 394



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 12/368 (3%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +++C    L F  L        +   A     +M + G  P   +   F+  +       
Sbjct: 175 HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 246 IALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            AL   ++M   + I PNV   + ++   CK G    +  +F  M+  G  P++ TYN +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G C  G  S A +    M +  I PNV+T+N LI  F K+GK  EA  ++ EM    +
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN +TYN++I+G+ +    +    ++  M   G   D+ T+  LI G C   +      
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L+ ++ +  LV N  TY+ LI G C+  +   A  L + MI SG  P+      L+   C
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 485 QNEDFDRAAEVLLEMLEKCM-----------APDSIILSELYSGLHHCGKDELAMKLFRK 533
            N     A E+   M +  M            PD +  + L  GL + GK   A +L+ +
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 534 MEIRGLLP 541
           M  RG++P
Sbjct: 535 MPHRGIVP 542



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 13/350 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++   +    F   ++L+D +L   R    + + ++ +   +  + +   A D F  M 
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLP--RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    +     ++R+D  +    EM R  +  N  T N ++H FC +G + 
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK-----------NGI 329
            A+++ + M S G  P + T NTL+ G C+ G L  A++    M+K           NG+
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+V+T+N LI G   +GK  EA  ++ EM    + P+ +TY+++I+G  +    +    
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           ++  M       +++T+N LI G CK G+      L  ++ +  +V +A  Y  LI G  
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              N   A  +++ MI SG  P+      +++ F   E+ +RA  +L ++
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 178/348 (51%), Gaps = 36/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PI+E  NK + SL+  +    A+  +K+M+   I P+++TLN++++ FC LG +  +  V
Sbjct: 9   PIMEF-NKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------- 330
              +  +G+ P+  T NTL+ G C KG +  ++ F + +   G Q               
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 331 --------------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                               PNV+ +NT+I G CK   ++EA  ++SEM A  + PNV+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+TLI G+   G       L  EM+   I  ++ TY  L+  LCKEGK K+A  L+  + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  + PN  +Y+ L+ G C+    + A Q++ +M++ G  PN + + +++   C+++  D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A  +L E+L K M P+++  S L  G    G+   A+ L ++M  RG
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRG 355



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 154/292 (52%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +      PNV   N ++   CK  ++  A +++  M++ G  P+V TY+TLI 
Sbjct: 134 ALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIY 193

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A    N M    I PNV T+  L+   CK+GK+ EA  + + M    V P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKP 253

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVV+YNTL++GY  +G  +    ++  M++ G+  ++ +YN +I  LCK  +  +A  L+
Sbjct: 254 NVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLL 313

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++   ++VPN  TYS+LI G C       A  L K M   G   +   +  L+   C+N
Sbjct: 314 REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKN 373

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++ D+A  + ++M E+ + P+    + L  GL   G+ + A KLF+ + ++G
Sbjct: 374 QNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG 425



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +       K    A D + +M   G  P + + +  +     + ++  A G   E
Sbjct: 151 VMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNE 210

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+PNVYT  ++M A CK G ++ A  +   M   G  P+V +YNTL+ G+C  G 
Sbjct: 211 MILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGE 270

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M + G+ PNV ++N +I   CK  ++ EA  +  E+   N+ PN VTY++
Sbjct: 271 VQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSS 330

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ ++G       L +EM   G   D++TY +L+  LCK     KA  L   + +  
Sbjct: 331 LIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ALI G C     + A +L++ ++  GCR N   + +++S  C+    D A 
Sbjct: 391 IQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEAL 450

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +  +M E    PD++    +   L    +++ A KL  +M  + LL
Sbjct: 451 AMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 138/284 (48%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R +P +   N ++ +  K+     A+ +FK M+  G  P + T N LI+  C+ G ++ +
Sbjct: 5   RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 + K G QPN IT NTL+ G C KG++ ++     ++ A     + V+Y TL+NG
Sbjct: 65  FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             ++G +     L   +     + +++ YN +I GLCK+    +A  L  ++D   + PN
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPN 184

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TYS LI G C+      AF L   MI     PN + + +LM   C+      A  +L 
Sbjct: 185 VITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLA 244

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            M ++ + P+ +  + L  G    G+ + A ++F  M  +G+ P
Sbjct: 245 VMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 5/307 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K + A +    M   G  P + S N  +        V  A   +  M 
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV 282

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++PNVY+ N+++   CK   ++ A+ + + +     +P+  TY++LI G C  G ++
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRIT 342

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M   G   +V+T+ +L+   CK   L +A  +F +MK   + PN  TY  LI
Sbjct: 343 SALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALI 402

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +    L++ +L  G ++++ TYN +I GLCKEG   +A  +   +++N  +
Sbjct: 403 DGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCI 462

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A T+  +I     +  +++A +L   MI          F         NE+ D+A ++
Sbjct: 463 PDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLLR----FRDFHGERSPNEN-DKAEKL 517

Query: 496 LLEMLEK 502
           L EM+ K
Sbjct: 518 LHEMIAK 524



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 117/239 (48%), Gaps = 20/239 (8%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           F T VQ  K  +  + +++I++  L K+++   + ++LR +L  +   +P    +++ YS
Sbjct: 278 FHTMVQ--KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNM--VP----NTVTYS 329

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
                        L   +    +  +A D   +M   G    + +    L +L  ++ +D
Sbjct: 330 S------------LIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   + +M+   I PN YT   ++   CK G  + A ++F+++   G   +V TYN +I
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMI 437

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           SG C +G+L  A+  K+ ME+NG  P+ +TF  +I    +K +  +A ++  EM A ++
Sbjct: 438 SGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 168/300 (56%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           +RVD A     ++ +    P+  T + +++  C      RA+E F  M + G+ P++ TY
Sbjct: 133 QRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTY 192

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NT+I G C  G  ++A+     M+K G +P+++ +NT+I G CK   + EA  IFSE+K 
Sbjct: 193 NTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKG 252

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V P+V TY+ L++G       E  ++L+ EM+   I  D++T+N L+  LCKEG   +
Sbjct: 253 KGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSE 312

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  ++K + +  + PN +TY++L+ G C++     A  ++ +MI  GC PN   + +L++
Sbjct: 313 AQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILIN 372

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +C+ +  D A E+  EM  + + P++   + L SGL   G+   A +LF+ M+ +G  P
Sbjct: 373 GYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSP 432



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 175/346 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   ++  ++   A     ++   GF P   + +  ++ L   ++   A+ F+ EM 
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +   PN++T N ++  FCK+G    AV + K M+  G  P +  YNT+I G C   L+S
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + ++  G++P+V T++ L+ G C   +  EA+ +F+EM + N+ P+VVT+N L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   + G       + + M+  G++ +  TYN+L+ G C + K  +A  +   +     +
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  +Y+ LI G C  +  + A +L+  M   G  PN   +  L+S  CQ      A E+
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +M  +  +PD +  + L   L   G  + A++LFR M+   L P
Sbjct: 422 FKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKP 467



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 154/334 (46%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +   + F  L        KF  A + F +M   G+ P + + N  +       +  +A+G
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVG 210

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             K+M +    P++   N ++   CK  ++  A+++F  ++  G  P V TY+ L+ G C
Sbjct: 211 LLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N      A    N M    I P+V+TFN L+   CK+G L EA  I   M    V PN  
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN+L+NGY           +++ M+  G   ++++YN LI G CK  +  +A  L  ++
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L+PN   Y+ LI+G C       A +L+K M   GC P+     +L+ + C+    
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           D A  +   M + C+ P+ +    L   ++  GK
Sbjct: 451 DNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGK 484



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/321 (29%), Positives = 159/321 (49%), Gaps = 4/321 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYS-YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S++ G+   D F    + FD ++ S Y+    +   ++ + K +    K   A     +M
Sbjct: 159 SLINGLCFEDKFARAMEFFDEMVASGYQ---PNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P I   N  +  L     V  AL  + E++   + P+V+T +++MH  C     
Sbjct: 216 DKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQK 275

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A  +F  M S+  +P V T+N L+   C +G+LS A     +M + G++PN  T+N+L
Sbjct: 276 EEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSL 335

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G+C + K+ EA  +F  M      PNVV+YN LINGY +    +    L++EM   G+
Sbjct: 336 MNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGL 395

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +   YN LI GLC+ G+  +A  L KD+      P+  T + L+   C     + A +
Sbjct: 396 IPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALR 455

Query: 460 LYKSMIRSGCRPNKHIFEMLM 480
           L+++M  S  +PN   +++L+
Sbjct: 456 LFRAMQDSCLKPNLVTYDILI 476



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 147/319 (46%), Gaps = 39/319 (12%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP I   +K LS+L+  +     L   K +   RI  +V+  N++++ F +L  ++ A  
Sbjct: 81  LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFS 140

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +  +GF                                   +P+ +TF++LI G C
Sbjct: 141 VLGKIIKLGF-----------------------------------EPDAVTFSSLINGLC 165

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
            + K   A   F EM A+   PN+ TYNT+I G+ ++G + +   L ++M + G + DI+
Sbjct: 166 FEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIV 225

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YN +I GLCK+    +A  +  ++    + P+  TYS L+ G C     E A  L+  M
Sbjct: 226 IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM 285

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +     P+   F +L+   C+      A  ++  M+EK + P+    + L +G  +C ++
Sbjct: 286 MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG--YCLQN 343

Query: 525 EL--AMKLFRKMEIRGLLP 541
           ++  A  +F  M  +G +P
Sbjct: 344 KVFEARMVFDAMITKGCMP 362



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 122/268 (45%)

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C L  IE A+  F +M     +P +  ++ L+S           +     +E   I+ +V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
             FN LI  F +  ++  A  +  ++      P+ VT+++LING             ++E
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+ +G + ++ TYN +I G CK GKT  A  L+K +DK    P+   Y+ +I G C  + 
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  ++  +   G RP+   + +LM   C ++  + A+ +  EM+   + PD +  + 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L   L   G    A  + + M  +G+ P
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEP 327



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 76/155 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y  + K   A   F  M   G +P + S N  ++    ++R+D A   + EM 
Sbjct: 332 YNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMS 391

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN +  N ++   C+ G    A E+FK+M++ G  P + T   L+   C  G L 
Sbjct: 392 FRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLD 451

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            A++    M+ + ++PN++T++ LI    K GK++
Sbjct: 452 NALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIY 486



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 69/135 (51%), Gaps = 2/135 (1%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +FD+++   + C  + + +++L   Y   ++   A + F +M   G +P   + N  +S 
Sbjct: 351 VFDAMIT--KGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISG 408

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L  + R   A   +K+M+    SP++ T  +++ + CKLG ++ A+ +F+ M+     P+
Sbjct: 409 LCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPN 468

Query: 298 VTTYNTLISGHCNKG 312
           + TY+ LI      G
Sbjct: 469 LVTYDILIRAMYKSG 483


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/322 (32%), Positives = 160/322 (49%), Gaps = 9/322 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YG  PI+E        L  ++R+D AL   +EM    I P+ +  N V+   C+   +E 
Sbjct: 117 YG--PIVER-------LCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F+ M      P+V TYNTLI+G C    +  A +    M   G  P  +++NTLI 
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFCKK  L  A  +F +M  +N  PNVVTY TLI+G  + G  +  A + + M++ G+  
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++ TY+ LI G CK  +  +A  L++ +    + P   TY+ L+   C     E AF+L+
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M +  C P    +  L+   C ++  D A  +  EM+ K   PD+I    L  GL   
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407

Query: 522 GKDELAMKLFRKMEIRGLLPKG 543
           GK   A +L  KM++    P G
Sbjct: 408 GKVHEAQELMEKMKLTKRNPFG 429



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 155/313 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R      L +  + +     K+  +A  T  +M   G  P     N  LS L   E+V+ 
Sbjct: 108 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 167

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +++M + RI+PNV T N +++  CK   IE A E+FK M   G++P+  +YNTLI 
Sbjct: 168 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 227

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C K  L  A    + M ++   PNV+T+ TLI G  K GK+  A  +   M    V+P
Sbjct: 228 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 287

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY+ LI+G+ +V   +    L E+M+  GI   ++TYN L+  LC+  K + A  L 
Sbjct: 288 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 347

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + +    P   TY+ L+   C  K  + A +LY  MI  GC P+   ++ L     + 
Sbjct: 348 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 407

Query: 487 EDFDRAAEVLLEM 499
                A E++ +M
Sbjct: 408 GKVHEAQELMEKM 420



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 142/307 (46%), Gaps = 10/307 (3%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   R+ P   T N V   F K G +E+  EV++ M   G+    + Y  LIS  C  G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A K  + M     +   I ++T+I   CK  ++ EA  +  +M A    P+ +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++    +    +   +  EEM   GIK D   YN ++ GLC+E K ++A  L + + K  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ LI G C     E A++L+K M   G  P +  +  L+  FC+ +D   A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGF 544
           +V  +M+     P+ +  + L  GL   GK + A ++   M  +G+ P          GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 545 DKLRTIN 551
            K+R ++
Sbjct: 300 CKVRRVD 306



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 2/209 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G            +FD ++ S   C  + + +  L    +   K + A +   
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKMVRSN--CVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P + + +  +       RVD A    ++M    I+P V T N+++++ C+  
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRAD 338

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A ++F+ M      P+V TYNTL+   C+   L  A +    M   G  P+ IT++
Sbjct: 339 KLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYD 398

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           TL +G  + GK+HEA  +  +MK T  +P
Sbjct: 399 TLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 174/343 (50%), Gaps = 3/343 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L + +    K + AT     + + G +P + + N  +     S  +D AL   + + R  
Sbjct: 147 LIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL---EVLERMS 203

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+V T N ++ + C  G ++ A+EV          P V TY  LI   CN   +  AM
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M K G +P+V+T+N LI G CK+G+L EA +  + M +    PNV+T+N ++   
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G       L  +MLR G    ++T+N LI  LC++    +A  +++ + K+  VPN+
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ L+ G C  K  +RA +  + M+  GC P+   +  L++  C++   D A E+L +
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  K  +P  I  + +  GL   GK E A++L  +M  +GL P
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKP 486



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 164/304 (53%), Gaps = 2/304 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D +    + C    + +++L        +   A      M  YG  P + + N  L 
Sbjct: 264 KLLDEM--RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILR 321

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           S+  + R   A     +M R   SP+V T N++++  C+  ++ RA++V + M   G +P
Sbjct: 322 SMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVP 381

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  +YN L+ G C +  +  A+++  +M   G  P+++T+NTL+   CK GK+  A  I 
Sbjct: 382 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +++ +   SP ++TYNT+I+G  +VG +E    L EEM R G+K DI+TY+ L+ GL +E
Sbjct: 442 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGRE 501

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           GK  +A  +  D++  S+ P+A TY+A++ G C  + + RA      M+  GC+P +  +
Sbjct: 502 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATY 561

Query: 477 EMLM 480
            +L+
Sbjct: 562 TILI 565



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 151/310 (48%), Gaps = 3/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L+ +  ++  L F + M      P+V     ++  FC+ G  ++A  + + +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P V TYN LI G+C  G +  A++   ++E+  + P+V+T+NT++   C  GKL E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALE---VLERMSVAPDVVTYNTILRSLCDSGKLKE 226

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +          P+V+TY  LI              L +EM + G K D++TYN LI 
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G+CKEG+  +A   + ++      PN  T++ ++   C       A +L   M+R GC P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   F +L++  C+     RA +VL +M +    P+S+  + L  G     K + A++  
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 532 RKMEIRGLLP 541
             M  RG  P
Sbjct: 407 EIMVSRGCYP 416



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 130/272 (47%), Gaps = 18/272 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  +L                   + C  S + F++L  
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDML------------------RKGCSPSVVTFNILIN 356

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               ++    A D   +M  +G +P   S N  L      +++D A+ + + M      P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A++  
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELL 476

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G++P++IT++TL+ G  ++GK+ EA +IF +M+  ++ P+ VTYN ++ G  + 
Sbjct: 477 EEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 536

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
             +         M+  G K    TY  LI G+
Sbjct: 537 QQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 219/486 (45%), Gaps = 61/486 (12%)

Query: 101 STHLTP----FRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           +T  TP     R+ H L  V  D++LS           PSS  L    +  HIL + R F
Sbjct: 38  TTAATPISDRLRLLHSLQAVPADHLLSHPL--------PSSAHL---CLAAHILARARLF 86

Query: 157 KSSESILRGILDSDSF-DLPSKLFDSILYSYRMC-----DSSPLVFDLLFKTYAHRKKFR 210
             S S+L  +L       L + L D +L+   +       + P V D L    A R    
Sbjct: 87  PHSRSLLSRLLAPGHHPHLAASLVD-LLHRAALALGPRRSALPSVVDTLLSLLADRGLLD 145

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A     ++R+    P   +CN  L  L      ++A   ++++     +PNV+T N+++
Sbjct: 146 DAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMI 201

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH---------------------- 308
              CK G +  A  +   M+++G  P V TYN+LI G+                      
Sbjct: 202 DFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCR 261

Query: 309 -------------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
                        C  G +  A  +   M++ G+  NV+TF+T +  FCK G + EA ++
Sbjct: 262 PDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKL 321

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F++M+   + PN VTY  L++G  + G  +    L  EM++ G+ ++++TY  L+ GLCK
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK 381

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EGK  +A  + + +++  +  N   Y+ LI G  V KNSERA  L   M   G   +  +
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+   C  +  D A  +L +M E  + P+++I + +        K+  A+ L +KM 
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501

Query: 536 IRGLLP 541
             G  P
Sbjct: 502 DSGFRP 507



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 35/386 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L   Y    +         +MR  G  P + + N  ++      R++ A 
Sbjct: 225 CSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAY 284

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            ++ EM+R  +  NV T +  + AFCK G++  A+++F  M   G  P+  TY  L+ G 
Sbjct: 285 SYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGT 344

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A+   N M + G+  NV+T+  L+ G CK+GK+ EA  +F  M+   +  N 
Sbjct: 345 CKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANE 404

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + Y TLI+G+    NSE   SL  EM   G+++D+  Y ALI GLC   K  +A  L+  
Sbjct: 405 LLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNK 464

Query: 429 LDKNSL-----------------------------------VPNASTYSALITGQCVRKN 453
           +D+  L                                    PN  TY AL+ G C   +
Sbjct: 465 MDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGS 524

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A   +  M+  G  PN   +  L+   C+N   D+A  +L EM++K M+ D+++ + 
Sbjct: 525 IDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTS 584

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  G    G  + A  L  KM   GL
Sbjct: 585 LMDGHLKQGNLQDAFALKAKMINSGL 610



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 161/377 (42%), Gaps = 35/377 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F      +      R A   F QMR  G  P   +    +     + R+D AL    E
Sbjct: 300 VTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNE 359

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH----- 308
           M +  +  NV T  +++   CK G +  A +VF+ ME  G   +   Y TLI GH     
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKN 419

Query: 309 ------------------------------CNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                                         CN   L  A    N M++ G++PN + +  
Sbjct: 420 SERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTN 479

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++    K  K  EA  +  +M  +   PN+VTY  L++G  + G+ +   S + +M+  G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++ ++  Y AL+ GLCK G+  KA  L+ ++    +  +    ++L+ G   + N + AF
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   MI SG + + + +   +  FC       A EVL EM+E  + PD+++ + L +  
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659

Query: 519 HHCGKDELAMKLFRKME 535
              G  E A  L  +ME
Sbjct: 660 QKLGNMEEAAILQNEME 676



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/332 (21%), Positives = 138/332 (41%), Gaps = 21/332 (6%)

Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMC 189
           VQ   P  L + T+++++  L K  K   +E + R +++         L+ ++++ + + 
Sbjct: 361 VQQGVP--LNVVTYTVLVDGLCKEGKVAEAEDVFR-LMERAGIRANELLYTTLIHGHFVY 417

Query: 190 DSSPLVFDLLFKT------------------YAHRKKFRNATDTFCQMRDYGFLPIIESC 231
            +S     LL +                     + +K   A     +M + G  P     
Sbjct: 418 KNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
              + +   + +   A+   ++M  +   PN+ T   ++   CK G I+ A+  F  M  
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD 537

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G  P+V  Y  L+ G C  G L  A+   + M   G+  + +   +L+ G  K+G L +
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  + ++M  + +  ++  Y   + G+  +   +    +  EM+ NGI  D + YN LI 
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
              K G  ++AA L  +++      NA   S 
Sbjct: 658 KCQKLGNMEEAAILQNEMESLLSCTNADAASG 689



 Score = 42.0 bits (97), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T + ++      ++SE A++L++ +      PN   F +++   C+  D   A  +
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           L  M     +PD +  + L  G   CG+ E   KL  +M   G  P        +NC  +
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCK 276

Query: 556 NGEKE 560
            G  E
Sbjct: 277 FGRME 281


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 181/380 (47%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +        +  ++ + F +M+D G  P I + N  +     S R   A    +E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISPNV T N +++AF K G    A E++  M   G IP+  TYN++I G C +  
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  P+V TF TLI G+C   ++ +   +  EM    +  N VTYNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK------ 427
           LI+G+  VG+      L ++M+ +G+  DI+T N L+ GLC  GK K A  + K      
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 428 -DLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            DLD     N + P+  TY+ LI G         A +LY+ M   G  P+   +  ++  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++ + M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 614 AIIYITLIYGFRKVGNINGA 633



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 167/376 (44%), Gaps = 40/376 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   G  P + +    L  L    RV  AL  + ++ 
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQIC 178

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
           R    P+V T   +M+  C+ G +  AV +   M   G  P   TY T + G C  G   
Sbjct: 179 R----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 313 -LLSLAMKFKNL--------------------------------MEKNGIQPNVITFNTL 339
             L+L  K + +                                M+  GI PN++T+N +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  G+   A R+  EM    +SPNVVTYN LIN + + G     A LY+EML  GI
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             + +TYN++I G CK+ +   A  +   +      P+  T++ LI G C  K  +   +
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M R G   N   +  L+  FC   D + A ++  +M+   + PD +  + L  GL 
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 520 HCGKDELAMKLFRKME 535
             GK + A+++F+ M+
Sbjct: 475 DNGKLKDALEMFKAMQ 490



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 11/353 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    KF  A + + +M   G +P   + N  +      +R+D A   +  
Sbjct: 324 VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYL 383

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V+T   ++  +C    I+  +E+   M   G + +  TYNTLI G C  G 
Sbjct: 384 MATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGD 443

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT----------- 362
           L+ A+     M  +G+ P+++T NTL+ G C  GKL +A  +F  M+ +           
Sbjct: 444 LNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFN 503

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+V+TYN LI G    G       LYEEM   GI  D +TY+++I GLCK+ +  +A
Sbjct: 504 GVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   +   S  PN  T++ LI G C     +   +L+  M R G   +  I+  L+  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F +  + + A ++  EM+   + PD+I +  + +G     + E A+ +   ++
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 174/341 (51%), Gaps = 9/341 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +   NK + +++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 60  KGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSF 119

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +G  P V T+ TL+ G C    +S A+   + +  
Sbjct: 120 TILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI-- 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +P+V+TF TL+ G C++G++ EA  +   M    + P+ +TY T ++G  ++G++  
Sbjct: 178 --CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVS 235

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + IK +++ Y+A+I GLCK+G+   +  L  ++    + PN  TY+ +I
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMI 295

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C+      A +L + M+     PN   +  L++ F +   F  AAE+  EML + + 
Sbjct: 296 GGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 355

Query: 506 PDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
           P++I  + +  G   C +D L  A  +F  M  +G  P  F
Sbjct: 356 PNTITYNSMIDGF--CKQDRLDAAEDMFYLMATKGCSPDVF 394



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 162/368 (44%), Gaps = 12/368 (3%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +++C    L F  L        +   A     +M + G  P   +   F+  +       
Sbjct: 175 HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTV 234

Query: 246 IALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            AL   ++M   + I PNV   + ++   CK G    +  +F  M+  G  P++ TYN +
Sbjct: 235 SALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCM 294

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G C  G  S A +    M +  I PNV+T+N LI  F K+GK  EA  ++ EM    +
Sbjct: 295 IGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 354

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN +TYN++I+G+ +    +    ++  M   G   D+ T+  LI G C   +      
Sbjct: 355 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 414

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L+ ++ +  LV N  TY+ LI G C+  +   A  L + MI SG  P+      L+   C
Sbjct: 415 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 474

Query: 485 QNEDFDRAAEVLLEMLEKCM-----------APDSIILSELYSGLHHCGKDELAMKLFRK 533
            N     A E+   M +  M            PD +  + L  GL + GK   A +L+ +
Sbjct: 475 DNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEE 534

Query: 534 MEIRGLLP 541
           M  RG++P
Sbjct: 535 MPHRGIVP 542



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 13/350 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++   +    F   ++L+D +L   R    + + ++ +   +  + +   A D F  M 
Sbjct: 328 ALINAFVKEGKFFEAAELYDEMLP--RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    +     ++R+D  +    EM R  +  N  T N ++H FC +G + 
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK-----------NGI 329
            A+++ + M S G  P + T NTL+ G C+ G L  A++    M+K           NG+
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+V+T+N LI G   +GK  EA  ++ EM    + P+ +TY+++I+G  +    +    
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           ++  M       +++T+N LI G CK G+      L  ++ +  +V +A  Y  LI G  
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              N   A  +++ MI SG  P+      +++ F   E+ +RA  +L ++
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 150/317 (47%), Gaps = 13/317 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    D  D    +F   L + + C      F  L   Y   K+  +  +   +M 
Sbjct: 363 SMIDGFCKQDRLDAAEDMF--YLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 420

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +        ++ AL   ++M  + + P++ T N ++   C  G ++
Sbjct: 421 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 281 RAVEVFKNMESM-----------GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
            A+E+FK M+             G  P V TYN LI G  N+G    A +    M   GI
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+ IT++++I G CK+ +L EA ++F  M + + SPNVVT+NTLINGY + G  + G  
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ EM R GI  D + Y  LI G  K G    A  + +++  + + P+  T   ++TG  
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 450 VRKNSERAFQLYKSMIR 466
            ++  ERA  + + + R
Sbjct: 661 SKEELERAVAMLEDLQR 677



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 125/255 (49%), Gaps = 11/255 (4%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ + ++ L   +        A D   QM   G  P I +CN  L  L D+ ++  AL  
Sbjct: 426 ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEM 485

Query: 251 YKEMRR-----------NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           +K M++           N + P+V T N+++      G    A E+++ M   G +P   
Sbjct: 486 FKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTI 545

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY+++I G C +  L  A +    M      PNV+TFNTLI G+CK G++ +   +F EM
Sbjct: 546 TYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEM 605

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               +  + + Y TLI G+ +VGN      +++EM+ +G+  D +T   ++ G   + + 
Sbjct: 606 GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEEL 665

Query: 420 KKAAYLVKDLDKNSL 434
           ++A  +++DL +  L
Sbjct: 666 ERAVAMLEDLQRYQL 680


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 170/324 (52%), Gaps = 1/324 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + GF+    +C   + +      V+  +G++ +M    ++PNV     +++  CK G 
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFN 337
           I++A E+ + M   G+ P+V T+ TLI G C KG    A + F  L+  +G +PNV T+ 
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G+CK+ KL+ A  + S M+   + PN  TY TLI+G+ +VGN      L + M + 
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   +I TYNA+I GLCK+G   +A  L+  +  + L  +  TY+ L++  C + ++ R+
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              +  M++ G  P+ H +  L+STFC+ +    +  +  E +   + P     + +  G
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICG 549

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G   LA+KLF++M   G  P
Sbjct: 550 YCRYGNTSLAVKLFQRMSNHGCAP 573



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 171/350 (48%), Gaps = 5/350 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V   +   +A   K + A +   +M++ G +P  ++ N  L   +    V+IA   + EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  +SP+  +  +++ A C +G +  A      M   GFI    T   +I   C KG +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +  + +   M + G+ PNVI F  LI G CK+G + +A  +  EM      PNV T+ TL
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 375 INGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R +G K ++ TY A+I G CKE K  +A  L+  + +  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN +TY+ LI G C   N  RA++L   M + G  PN + +  ++   C+    D A 
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            +L ++    +  D +  + L S   HC + +   ++  F KM   G  P
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSV--HCRQADTNRSLVFFNKMLKVGFTP 503



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 173/359 (48%), Gaps = 12/359 (3%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG-FYKEM 254
           F  L      +   + A +   +M   G+ P + +    +  L      + A   F K +
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R +   PNV+T   +++ +CK   + RA  +   M+  G +P+  TY TLI GHC  G  
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  +LM K G  PN+ T+N +I G CKKG L EA R+ +++    +  + VTY  L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + +  ++      + +ML+ G   DI +Y  LI   C++ + K++  L ++     L
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGL 536

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P   TY+++I G C   N+  A +L++ M   GC P+   +  L+S  C+    D A  
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDE--LAMKLFRKMEIRGLLPKGFDKLRTIN 551
           +   M++K ++P  +  + L     +C KD+   A+ +  ++E R         +RT+N
Sbjct: 597 LYDAMMDKGLSPCEV--TRLTLAYEYCKKDDSSTAINVLDRLEKR-------QWIRTVN 646



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 1/345 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           L+   +  +         F +M + G  P + +    ++ L     +  A    +EM R 
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
              PNVYT   ++   CK G  E+A  +F K + S G+ P+V TY  +I+G+C +  L+ 
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    + M++ G+ PN  T+ TLI G CK G    A  +   M     SPN+ TYN +I+
Sbjct: 384 AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID 443

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G+ +    L  ++  +G++ D +TY  L+   C++  T ++      + K    P
Sbjct: 444 GLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  +Y+ LI+  C +K  + + +L++  +  G  P K  +  ++  +C+  +   A ++ 
Sbjct: 504 DIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             M     APDSI    L SGL    K + A  L+  M  +GL P
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 154/309 (49%), Gaps = 3/309 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+    EM+   + P+  TLN V+     +G++E A  +F  M   G  P   ++  ++ 
Sbjct: 173 AVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN G +  A ++ N M + G   +  T   +I  FC+KG ++     F +M    ++P
Sbjct: 233 ACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAP 292

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL- 425
           NV+ +  LING  + G+ +    L EEM+R G K ++ T+  LI GLCK+G T+KA  L 
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF 352

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +K +  +   PN  TY+A+I G C      RA  L   M   G  PN + +  L+   C+
Sbjct: 353 LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG-- 543
             +F RA E++  M ++  +P+    + +  GL   G  + A +L  K+ + GL   G  
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472

Query: 544 FDKLRTINC 552
           +  L +++C
Sbjct: 473 YTILMSVHC 481



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 3/316 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +R  G+ P + +    ++     ++++ A      M+   + PN  T   ++   CK+G 
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             RA E+   M   GF P++ TYN +I G C KG L  A +  N +  +G+Q + +T+  
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+   C++   + +   F++M     +P++ +Y TLI+ + +    +    L+EE +  G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLG 535

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +     TY ++I G C+ G T  A  L + +  +   P++ TY ALI+G C     + A 
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            LY +M+  G  P +     L   +C+ +D   A  V L+ LEK     ++  + L   L
Sbjct: 596 NLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV-LDRLEKRQWIRTV--NTLVRKL 652

Query: 519 HHCGKDELAMKLFRKM 534
              GK ++A   F K+
Sbjct: 653 CSEGKLDMAALFFHKL 668



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 99/235 (42%), Gaps = 5/235 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+    S D   +L + +  S     +  + + +L   +  +     +   F +M 
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKV--SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P I S    +S+    +++  +   ++E     + P   T   ++  +C+ G   
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV++F+ M + G  P   TY  LISG C +  L  A    + M   G+ P  +T  TL 
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           + +CKK     A  +   ++       + T NTL+      G  +M A  + ++L
Sbjct: 618 YEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 98/243 (40%), Gaps = 43/243 (17%)

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           KNL   N +         ++  F + GKL EA  +  EM+   + P+  T N +++    
Sbjct: 148 KNLERANEV------MQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVG 201

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNAS 439
           +G  E+  +++ EM + G+  D +++  +++  C  G+  +A  +L   +++  +V NA+
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNAT 261

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
                                                 +++  FCQ    +R      +M
Sbjct: 262 C------------------------------------TLIIDAFCQKGYVNRVVGYFWKM 285

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           +E  +AP+ I  + L +GL   G  + A +L  +M  RG  P  +     I+   + G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 560 ESG 562
           E  
Sbjct: 346 EKA 348


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 193/416 (46%), Gaps = 37/416 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   + + D  + +F S+    + C  + + +  L   +   ++   A   F QM 
Sbjct: 244 SLILGYCRNKNVDAANAIFLSM--PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMH 301

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +    P + +    + +L    R   AL  +KEM      PNV+T  +++ + C+    +
Sbjct: 302 EDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFD 361

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++   M   G IPSV TYN LI G+C KGL + A++  +LME N   PN  T+N LI
Sbjct: 362 DAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELI 421

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY---GQVGNS------------- 384
            GFC+   +H+A  +  +M    + PNVVTYN LI+G    G +G++             
Sbjct: 422 LGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLV 481

Query: 385 -------------------EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
                              E   SL+E +   GIK + + Y+ LI G CK GK     +L
Sbjct: 482 PDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFL 541

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  +     VPN+ TY++LI G C  KN + A  L   MI+    P    + +L+    +
Sbjct: 542 LDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLK 601

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +++FD+A ++  +ML     PD  I +         G+ + A  L  KM  +G++P
Sbjct: 602 DDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMP 657



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 165/355 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C  +   + +L  +      F +A      M + G +P + + N  +           
Sbjct: 338 KHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSAS 397

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL     M  N  SPN  T N ++  FC+   I +A+ +   M      P+V TYN LI 
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L  A K  +LM ++G+ P+  T++  I   CK+G + EA  +F  +K   +  
Sbjct: 458 GQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKA 517

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V Y+TLI+GY +VG    G  L ++ML  G   + +TYN+LI G CKE   K+A  LV
Sbjct: 518 NEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLV 577

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + K  + P A TY+ LI         ++A  ++  M+ +G  P+  I+   +  +C +
Sbjct: 578 DIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSH 637

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A  ++ +M  K + PD+++ +         G  + A  + ++M   G  P
Sbjct: 638 GRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEP 692



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 226/496 (45%), Gaps = 51/496 (10%)

Query: 61  RNPIPIPHR------TLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV-- 112
           R    I HR      +LP+    + D     +S L   +W+K  +L   +      H+  
Sbjct: 23  RLTFSITHRFFTSPASLPQSFSVEHDIPAQLFSILSRPNWQKHPSLKNLIPSIAPSHISA 82

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI-LRGILDSDS 171
           L  +  D   +L FF W+         +++H  +L+IL  N   + +E++ +  I  +DS
Sbjct: 83  LFALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDS 142

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF---CQMRDYGFLPII 228
                             +++  V ++L       +      D F     +R Y  L ++
Sbjct: 143 -----------------SENALFVLEML-------RSMNRRVDAFKFKLTLRCYNMLLML 178

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-IIERAVEVFK 287
            S  +FL        +D     Y EM  + ++PN++TLN +++ +CKLG ++E  + V K
Sbjct: 179 LS--RFL-------MIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSK 229

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            +++ G      TY +LI G+C    +  A      M   G   N +++  LI GFC+  
Sbjct: 230 IVQA-GLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEAR 288

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           ++ EA ++FS+M   N  P V TY  +I    Q+G      ++++EM     + ++ TY 
Sbjct: 289 RVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYT 348

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI  LC++     A  ++  + +  L+P+  TY+ALI G C +  S  A ++   M  +
Sbjct: 349 VLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESN 408

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL- 526
            C PN   +  L+  FC+ ++  +A  +L +MLE+ + P+ +  + L  G   C + +L 
Sbjct: 409 NCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHG--QCKEGDLG 466

Query: 527 -AMKLFRKMEIRGLLP 541
            A KL   M   GL+P
Sbjct: 467 SAYKLLSLMNESGLVP 482



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/474 (20%), Positives = 188/474 (39%), Gaps = 82/474 (17%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           T K     + T+++++  L ++  F  ++ IL G+L+                       
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLI------------------P 377

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ L   Y  +    +A +    M      P   + N+ +      + +  A+   
Sbjct: 378 SVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLL 437

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M   ++ PNV T N+++H  CK G +  A ++   M   G +P   TY+  I   C +
Sbjct: 438 HKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKR 497

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           GL+  A      +++ GI+ N + ++TLI G+CK GK+ +   +  +M +    PN +TY
Sbjct: 498 GLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITY 557

Query: 372 NTLINGYGQVGN-----------------------------------SEMGASLYEEMLR 396
           N+LI+GY +  N                                    +    ++++ML 
Sbjct: 558 NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLS 617

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   D+  Y A I   C  G+ K A  L+  ++   ++P+   Y+  I       + + 
Sbjct: 618 TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLM-----------------------------STFCQNE 487
           AF + K M   GC P+ + +  L+                             S   +  
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRV 737

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D++   ++  +M E   AP++    +  +GL   G  E+A +LF  M+ +G  P
Sbjct: 738 DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 137/368 (37%), Gaps = 20/368 (5%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ +++  L   Y    K  +      +M   G +P   + N  +      +    A   
Sbjct: 517 ANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLL 576

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M +  I P   T  +++    K    ++A ++F  M S G  P V  Y   I  +C+
Sbjct: 577 VDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCS 636

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L  A      M   GI P+ + +   I  + + G +  A  I   M      P+  T
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ LI         E+ +S     L +G+  +  +         +    +    L   + 
Sbjct: 697 YSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFS------NCWRRVDYEFTLDLFGKMA 750

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           ++   PNA+TY   ITG C     E A +L+  M   G  PN+ I+  L+   CQ   + 
Sbjct: 751 EHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYG 810

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF--------------RKMEI 536
            A   L  M+E    P       L  GL+  G DE A ++F               K+ I
Sbjct: 811 EAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLI 870

Query: 537 RGLLPKGF 544
            GLL KG 
Sbjct: 871 DGLLKKGL 878



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 149/375 (39%), Gaps = 21/375 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   Y   K F+ A      M      P  ++    + +LL  +  D A 
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M      P+V+     +HA+C  G ++ A  +   M + G +P    Y   I  +
Sbjct: 610 DMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAY 669

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +  A      M + G +P+  T++ LI         H +N    E+ +++   ++
Sbjct: 670 GRFGSIDGAFGILKRMHEVGCEPSYYTYSCLI--------KHLSNAKPKEVSSSSELSDL 721

Query: 369 ---VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
              V  N   N + +V + E    L+ +M  +G   +  TY   I GLCK G  + A  L
Sbjct: 722 SSGVASNDFSNCWRRV-DYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRL 780

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + +    PN   Y++L+   C       A +    MI +   P+    ++L+     
Sbjct: 781 FDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYD 840

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG------- 538
             + ++A  V    L+     D ++   L  GL   G  +    LF  ME +G       
Sbjct: 841 EGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKT 900

Query: 539 --LLPKGFDKLRTIN 551
             +L +GFD ++ I+
Sbjct: 901 YSMLIEGFDGIQEID 915


>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Vitis vinifera]
          Length = 641

 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 172/329 (52%), Gaps = 5/329 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L+ L+   +VD A+ F++E        +  + N+++   C++G +++A E+F  M  
Sbjct: 206 NKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKVDKAFELFNEMRG 265

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            G  P V TYNTLI+G C    +       K L+ KN + P+V+T+ ++I G+CK GK+ 
Sbjct: 266 FGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTSIISGYCKLGKME 325

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A+ +F+ M ++ + PN  T+N LING+G+VG+     ++YEEML  G   DI+T+ +LI
Sbjct: 326 KASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLGCPPDIITFTSLI 385

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G C+ GK +++  L  +L+  +L PN  T++ L    C       A    + +      
Sbjct: 386 DGHCRTGKVERSLKLWHELNARNLSPNEYTFAILTNALCKENRLHEARGFLRDLKWRHIV 445

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AM 528
               ++  ++  FC+  + D A  +L EM EK   PD I  + L  G  HC K  L  A+
Sbjct: 446 AQPFMYNPVIDGFCKAGNVDEANVILAEMEEKRCKPDKITYTILIIG--HCMKGRLSEAI 503

Query: 529 KLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            +F +M   G  P        I+C  + G
Sbjct: 504 SIFNRMLGTGCAPDSITMTSLISCLLKAG 532



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 173/373 (46%), Gaps = 17/373 (4%)

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLP 226
           D+  F++     D + +S        +V++ L        +   A    C  R+  G   
Sbjct: 184 DAGKFNIARTWVDGVEFSL-------VVYNKLLNQLVRGNQVDEAV---CFFREQMGLHG 233

Query: 227 IIESC--NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
             +SC  N  +  L    +VD A   + EMR    SP+V T N +++ FC++  ++R  +
Sbjct: 234 PFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHD 293

Query: 285 VFKNMESMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           + K + S   + P V TY ++ISG+C  G +  A    N M  +GI+PN  TFN LI GF
Sbjct: 294 LLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            K G +  A  ++ EM      P+++T+ +LI+G+ + G  E    L+ E+    +  + 
Sbjct: 354 GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNE 413

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            T+  L   LCKE +  +A   ++DL    +V     Y+ +I G C   N + A  +   
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAE 473

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M    C+P+K  + +L+   C       A  +   ML    APDSI ++ L S L   G 
Sbjct: 474 MEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAG- 532

Query: 524 DELAMKLFRKMEI 536
             +  + +R M+I
Sbjct: 533 --MPNEAYRIMQI 543



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 149/302 (49%), Gaps = 7/302 (2%)

Query: 245 DIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           ++AL F++  R N  +  +  T + ++ +  ++G  E A  V+  M   G  P  +    
Sbjct: 118 ELALKFFQLSRVNLNLCHSFRTYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGF 177

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L+S   + G  ++A  + +     G++ +++ +N L+    +  ++ EA   F E    +
Sbjct: 178 LVSSATDAGKFNIARTWVD-----GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLH 232

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              +  ++N LI G  ++G  +    L+ EM   G   D++TYN LI G C+  +  +  
Sbjct: 233 GPFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGH 292

Query: 424 YLVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            L+K+L  KN L P+  TY+++I+G C     E+A  L+ +MI SG +PN   F +L++ 
Sbjct: 293 DLLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILING 352

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           F +  D   A  +  EML     PD I  + L  G    GK E ++KL+ ++  R L P 
Sbjct: 353 FGKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPN 412

Query: 543 GF 544
            +
Sbjct: 413 EY 414


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 183/380 (48%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F    ++ D +    + C  + + ++++        +  +A +   ++  
Sbjct: 186 LLEAVCKSTGFGQAMEVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSS 243

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P   S    L  L  ++R +     + EM      PN  T +M++  FC+ G++ER
Sbjct: 244 YGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V + M   G   + T  N +I+  C +G +  A +F N M   G  P+ I++ T++ 
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLK 363

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+  +  +A  +  EM   N  PN VT+NT I    Q G  E    L E+M  +G +V
Sbjct: 364 GLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I+TYNAL+ G C +G+   A  L   +      PN  TY+ L+TG C  +  + A +L 
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELL 480

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++  C PN   F +L+S FCQ    D A E++ +M+E    P+ I  + L  G+   
Sbjct: 481 AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD 540

Query: 522 GKDELAMKLFRKMEIRGLLP 541
              E A++L   +   G+ P
Sbjct: 541 CNSEEALELLHGLVSNGVSP 560



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 178/380 (46%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+RG+ D         L D +L+  R C  S + + +L +       F  A +   +MR 
Sbjct: 151 IIRGLCDRGRVGEALSLLDDMLH--RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRA 208

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + N  ++ +    RVD A  F   +      P+  +   V+   C     E 
Sbjct: 209 KGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 268

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             E+F  M     +P+  T++ L+   C  G++  A++    M  +G   N    N +I 
Sbjct: 269 VEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVIN 328

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             CK+G++ +A +  + M +   SP+ ++Y T++ G  +    E    L +EM+R     
Sbjct: 329 TICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPP 388

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +T+N  I  LC++G  ++A  L++ + ++    N  TY+AL+ G CV+   + A +L+
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM    C+PN   +  L++  C  E  D AAE+L EML+K  AP+ +  + L S     
Sbjct: 449 YSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQK 505

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A++L  +M   G  P
Sbjct: 506 GLMDEAIELVEQMMEHGCTP 525



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + PII         L D  RV  AL    +M      P+V T  +++ A CK     +
Sbjct: 146 YTYTPIIRG-------LCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+EV   M + G  P++ TYN +I+G C +G +  A +F N +   G QP+ +++ T++ 
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM   N  PN VT++ L+  + + G  E    + E+M  +G   
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C  +  E A +L 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+R  C PN+  F   +   CQ    ++A  ++ +M E     + +  + L +G    
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 522 GKDELAMKLFRKM 534
           G+ + A++LF  M
Sbjct: 439 GRVDSALELFYSM 451



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 170/354 (48%), Gaps = 3/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  T   + +  +A      M  YG  P   S    L  L  +ER + A 
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAK 375

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM R    PN  T N  +   C+ G+IE+A  + + M   G   ++ TYN L++G 
Sbjct: 376 ELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGF 435

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++    M     +PN IT+ TL+ G C   +L  A  + +EM   + +PNV
Sbjct: 436 CVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNV 492

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L++ + Q G  +    L E+M+ +G   +++TYN L+ G+ K+  +++A  L+  
Sbjct: 493 VTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHG 552

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L  N + P+  TYS++I         E A +++  +   G RP   I+  ++   C+  +
Sbjct: 553 LVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCN 612

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            D A +    M+     P+ +    L  GL +    +    L R++  RG+L K
Sbjct: 613 TDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVLNK 666



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 155/344 (45%), Gaps = 3/344 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SSP   +   +    R     A     +    G  P +  C K + +L    R   A   
Sbjct: 41  SSPNPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARV 100

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            +   R+  + +V+  N ++  +C+ G ++ A  +   + SM   P   TY  +I G C+
Sbjct: 101 LRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRL---IASMPVAPDAYTYTPIIRGLCD 157

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G +  A+   + M   G QP+V+T+  L+   CK     +A  +  EM+A   +PN+VT
Sbjct: 158 RGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVT 217

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN +ING  + G  +        +   G + D ++Y  ++ GLC   + +    L  ++ 
Sbjct: 218 YNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMM 277

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           + + +PN  T+  L+   C     ERA Q+ + M   GC  N  +  ++++T C+    D
Sbjct: 278 EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVD 337

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            A + L  M     +PD+I  + +  GL    + E A +L ++M
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEM 381



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+VY    ++   C+ G    A  V +  E  G    V  YNTL++G+C  G L  A  
Sbjct: 75  APDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAA-- 132

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            + L+    + P+  T+  +I G C +G++ EA  +  +M      P+VVTY  L+    
Sbjct: 133 -RRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVC 191

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +         + +EM   G   +I+TYN +I G+C+EG+   A   +  L      P+  
Sbjct: 192 KSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ ++ G C  K  E   +L+  M+   C PN+  F+ML+  FC+    +RA +VL +M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A ++ + + + + +   G+ + A +    M   G  P
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 130/280 (46%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ YT   ++   C  G +  A+ +  +M   G  PSV TY  L+   C       AM
Sbjct: 141 VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAM 200

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G  PN++T+N +I G C++G++ +A    + + +    P+ V+Y T++ G 
Sbjct: 201 EVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGL 260

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 E    L+ EM+      + +T++ L+   C+ G  ++A  +++ +  +    N 
Sbjct: 261 CAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANT 320

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +  + +I   C +   + AFQ   +M   GC P+   +  ++   C+ E ++ A E+L E
Sbjct: 321 TLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKE 380

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           M+ K   P+ +  +     L   G  E A  L  +M   G
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 3/135 (2%)

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           NA +  L       +AA LV         P+    + LI   C R  +  A ++ ++  R
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SG   +   +  L++ +C+    D A  ++  M    +APD+   + +  GL   G+   
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGE 163

Query: 527 AMKLFRKMEIRGLLP 541
           A+ L   M  RG  P
Sbjct: 164 ALSLLDDMLHRGCQP 178


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 172/353 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +  ++L   Y    +  +A     Q    GF P   + + F++ L  +  VD AL
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P+VYT + V++  C  G +E A  +   M   G +P  TT+NTLI   
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  L  A+     +   G+ PNV TFN LI   CK G  H A R+F EMK++  +P+ 
Sbjct: 382 CTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDE 441

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN LI+     G       L +EM  +G     +TYN +I GLCK  + ++A  +   
Sbjct: 442 VTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQ 501

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +D   +  NA T++ LI G C  +  + A +L   MI  G +PN   +  +++ +C+  +
Sbjct: 502 MDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGN 561

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AA++L  M       D +  + L +GL    + + A+KL R M ++G+ P
Sbjct: 562 ISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKP 614



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 177/355 (49%), Gaps = 1/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+     +  +     +  +   A     QM D G LP   + N  + +L    +++ AL
Sbjct: 332 CEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL 391

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +E+    +SPNVYT N++++A CK+G    AV +F+ M+S G  P   TYN LI   
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G L+ A+     ME +G   + +T+NT+I G CK+ ++ EA  +F +M  T +  N 
Sbjct: 452 CSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNA 511

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+NTLI+G       +  A L ++M+  G++ + +TYN+++   CK+G   KAA +++ 
Sbjct: 512 ITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQT 571

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +  N    +  TY+ LI G C  + ++ A +L + M   G +P    +  ++ +  +  +
Sbjct: 572 MTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNN 631

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD-ELAMKLFRKMEIRGLLPK 542
              A  +  EM E    PD+     ++ GL   G   + A     +M   G +P+
Sbjct: 632 GRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPE 686



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 174/355 (49%), Gaps = 6/355 (1%)

Query: 189 CDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           CD +P    F  L + +        A     +M + G  P   + N  ++      RV  
Sbjct: 225 CDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGD 284

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           ALG+ ++   +   P+  T +  ++  C+ G ++ A++V   M   G  P V TY+T+I+
Sbjct: 285 ALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVIN 344

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN G L  A    N M  +G  P+  TFNTLI   C + +L EA  +  E+    +SP
Sbjct: 345 CLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSP 404

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV T+N LIN   +VG+  +   L+EEM  +G   D +TYN LI  LC  GK  KA  L+
Sbjct: 405 NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLL 464

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K+++ +    +  TY+ +I G C R+  E A +++  M  +G   N   F  L+   C  
Sbjct: 465 KEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNA 524

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
           E  D AAE++ +M+ + + P+++  + + +  H+C +  +  A  + + M   G 
Sbjct: 525 ERIDDAAELVDQMISEGLQPNNVTYNSILT--HYCKQGNISKAADILQTMTANGF 577



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 161/338 (47%), Gaps = 1/338 (0%)

Query: 202 TYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           +YA  + F +A D      D +G     E  N  L+ L +  ++ +    Y EM    I 
Sbjct: 134 SYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIE 193

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+V T N V+ A C+      AV + + M S    P  TT+ TL+ G   +G +  A++ 
Sbjct: 194 PDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRL 253

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K  M + G  P  +T N LI G+CK G++ +A     +  A    P+ VT++T +NG  Q
Sbjct: 254 KARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQ 313

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+ +    +   ML+ G + D+ TY+ +I  LC  G+ ++A  +V  +  +  +P+ +T
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           ++ LI   C     E A  L + +   G  PN + F +L++  C+  D   A  +  EM 
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
                PD +  + L   L   GK   A+ L ++ME+ G
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 192/399 (48%), Gaps = 10/399 (2%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           E H + L ++   + F  S + L+  L  D+FDL S   D  ++  +   ++  V++ L 
Sbjct: 119 EGHEVGLGLV---QSFIGSYARLQ--LFDDAFDLVSNQLD--MFGVQ---ANTEVYNHLL 168

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
              A   K +     + +M   G  P + + N  + +L  + +   A+   +EM    ++
Sbjct: 169 TVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVA 228

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+  T   +M  F + G IE A+ +   M  MG  P+  T N LI+G+C  G +  A+ +
Sbjct: 229 PDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGY 288

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
                 +G +P+ +TF+T + G C+ G +  A ++   M      P+V TY+T+IN    
Sbjct: 289 IQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCN 348

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  E    +  +M+ +G   D  T+N LI+ LC E + ++A  L ++L    L PN  T
Sbjct: 349 NGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYT 408

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           ++ LI   C   +   A +L++ M  SGC P++  + +L+   C +    +A ++L EM 
Sbjct: 409 FNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
                  ++  + +  GL    + E A ++F +M++ G+
Sbjct: 469 VSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGI 507



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 148/323 (45%), Gaps = 1/323 (0%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           RD G  P  +   + +  L  +   D+      EMRR      +  +   + ++ +L + 
Sbjct: 82  RDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLF 141

Query: 280 ERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           + A ++  N   M G   +   YN L++       + L       M   GI+P+V+TFNT
Sbjct: 142 DDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNT 201

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I   C+  +   A  +  EM + +V+P+  T+ TL+ G+ + G+ E    L   M   G
Sbjct: 202 VIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMG 261

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                +T N LI G CK G+   A   ++    +   P+  T+S  + G C   + + A 
Sbjct: 262 CSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHAL 321

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++   M++ GC P+ + +  +++  C N + + A  ++ +M++    PD+   + L   L
Sbjct: 322 KVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVAL 381

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + E A+ L R++ ++GL P
Sbjct: 382 CTENQLEEALDLARELTVKGLSP 404



 Score =  125 bits (314), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 127/273 (46%), Gaps = 3/273 (1%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           V+    K+ ++E A   +  M S G  P V T+NT+I   C       A+     M    
Sbjct: 170 VLAEGSKIKLLESA---YTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           + P+  TF TL+ GF ++G +  A R+ + M     SP  VT N LINGY ++G      
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
              ++ + +G + D +T++  + GLC+ G    A  ++  + +    P+  TYS +I   
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     E A  +   M+ SGC P+   F  L+   C     + A ++  E+  K ++P+ 
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + L + L   G   LA++LF +M+  G  P
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTP 439



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/269 (23%), Positives = 112/269 (41%), Gaps = 1/269 (0%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  PS   Y  +I      G   L       M + G +  +    + I  + +     +A
Sbjct: 85  GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144

Query: 353 NRIFS-EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
             + S ++    V  N   YN L+    +    ++  S Y EM   GI+ D++T+N +I 
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC+  + + A  +++++    + P+ +T++ L+ G     + E A +L   M   GC P
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSP 264

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
                 +L++ +C+      A   + + +     PD +  S   +GL   G  + A+K+ 
Sbjct: 265 TSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVL 324

Query: 532 RKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             M   G  P  +     INC   NGE E
Sbjct: 325 GLMLQEGCEPDVYTYSTVINCLCNNGELE 353


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 5/400 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      +  ++L D +  S +   +S   F+ L   Y  R     A     +M +
Sbjct: 274 VINGLARKGELEKAAQLVDRMRMSKK---ASAFTFNPLITGYFARGSVEKAGALQLEMEN 330

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + N  +  +  S  V+ A   + EMR   + P++ T N +++ +CK G ++ 
Sbjct: 331 EGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKE 390

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +F +++  G  PSV TYN L+ G+C  G L  A +FK  M + G QP+V T+  L+ 
Sbjct: 391 ALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMN 450

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G  K   L      F EM +  + P+   YNT I+    +G++     L E M+  GI  
Sbjct: 451 GSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISS 510

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D +TYN  + GLCK G  K A  L   +  + L P+  TY+ LI   C R     A  ++
Sbjct: 511 DTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIF 570

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+ SG  P+   + + +  +C+  +   A     +MLE+ + P+ +  + L   L   
Sbjct: 571 DGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRM 630

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPENGEK 559
           G+  LA + F +M  RGL P  +     I  NC   N E+
Sbjct: 631 GRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEE 670



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 168/327 (51%), Gaps = 3/327 (0%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F +M  +G  P I+ CN  L +L D  R D     Y EM +  I P++ T N ++ +F 
Sbjct: 183 AFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFF 242

Query: 275 KLGIIERAVEVFKNMESM--GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           + G +++A ++ + ME+   G +PS  TYN +I+G   KG L  A +  + M  +  + +
Sbjct: 243 REGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KAS 301

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             TFN LI G+  +G + +A  +  EM+   + P VVTYNT+I+G  + GN E     + 
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   G+  D++TYN+LI G CK G  K+A +L  DL +  L P+  TY+ L+ G C   
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           + E A +  + M+  GC+P+   + +LM+   +  +     E   EML K + PD    +
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYN 481

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGL 539
              S     G    A +L   M  RG+
Sbjct: 482 TRISAELILGSTSEAFQLTEVMISRGI 508



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 176/386 (45%), Gaps = 42/386 (10%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-- 254
           +L+ +      ++ +    + +M   G  P I + N  L S     RVD A    +EM  
Sbjct: 200 NLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEA 259

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R     P+  T N+V++   + G +E+A ++   M  M    S  T+N LI+G+  +G +
Sbjct: 260 RPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASAFTFNPLITGYFARGSV 318

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A   +  ME  GI P V+T+NT+I G  + G +  A   F EM+A  + P+++TYN+L
Sbjct: 319 EKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSL 378

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY + GN +    L+ ++ R G+   +LTYN L+ G C+ G  ++A    +++ +   
Sbjct: 379 INGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGC 438

Query: 435 VPNASTYSALITG-----------------------------------QCVRKNSERAFQ 459
            P+ STY+ L+ G                                   + +  ++  AFQ
Sbjct: 439 QPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQ 498

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + MI  G   +   + + +   C++ +   A  + ++M+   + PD I  + L     
Sbjct: 499 LTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHA-- 556

Query: 520 HCGKDEL--AMKLFRKMEIRGLLPKG 543
           HC +  L  A  +F  M + GL P  
Sbjct: 557 HCERGRLREARDIFDGMLVSGLPPSA 582



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 134/296 (45%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S L +++L   Y        A     +M + G  P + +    ++       + +   F+
Sbjct: 406 SVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFF 465

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + P+ +  N  + A   LG    A ++ + M S G      TYN  + G C  
Sbjct: 466 DEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKS 525

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A      M  +G+QP+ IT+  LI   C++G+L EA  IF  M  + + P+ VTY
Sbjct: 526 GNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTY 585

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
              I+ Y + GN       +++ML  G++ + +TYN LI  LC+ G+T  A     ++ +
Sbjct: 586 TVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
             L PN  TY+ LI G C   N E A +LY  M + G  P+      L   F + +
Sbjct: 646 RGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQ 701



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 149/338 (44%), Gaps = 35/338 (10%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +MR  G LP + + N  ++    +  +  AL  + +++R  ++P+V T N+++  +C+
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 276 LGIIERAV-----------------------------------EVFKNMESMGFIPSVTT 300
           LG +E A                                    E F  M S G  P    
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YNT IS     G  S A +   +M   GI  + +T+N  + G CK G L +A  ++ +M 
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           +  + P+ +TY  LI+ + + G       +++ ML +G+    +TY   I   C+ G   
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A    + + +  + PN  TY+ LI   C    +  A+Q +  M+  G  PNK+ + +L+
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              C+  +++ A  +  EM +  + PD    + L+ G 
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 89/194 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R   S  + +++           ++A   + +M   G  P   +    + +  +  R+  
Sbjct: 506 RGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLRE 565

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +  M  + + P+  T  + +HA+C+ G +  A   F+ M   G  P+  TYN LI 
Sbjct: 566 ARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIH 625

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C  G  +LA +  + M + G+ PN  T+  LI G CK+G   EA R++SEM    + P
Sbjct: 626 ALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHP 685

Query: 367 NVVTYNTLINGYGQ 380
           +  T+N L  G+ +
Sbjct: 686 DHCTHNALFKGFDE 699



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 107/220 (48%), Gaps = 3/220 (1%)

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M  +G+ P +   N ++     + +  +   +++EM    + P++VTYNTL++ + + G 
Sbjct: 187 MAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR 246

Query: 384 SEMGASLYEEMLR--NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            +  A L  EM     G     +TYN +I GL ++G+ +KAA LV D  + S   +A T+
Sbjct: 247 VDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLV-DRMRMSKKASAFTF 305

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LITG   R + E+A  L   M   G  P    +  ++    ++ + + A    +EM  
Sbjct: 306 NPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRA 365

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + PD I  + L +G    G  + A+ LF  ++  GL P
Sbjct: 366 MGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAP 405


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 174/336 (51%), Gaps = 12/336 (3%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSL------LDSERVDIALGFYKEMRRNRISPNVYT 265
           A + F +M +    P + + NK + +L      L+SER+     F K ++R  + PN++T
Sbjct: 279 ARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERL-----FDKVLKRG-VCPNLFT 332

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+ +   CK G ++RAV +   +   G  P V TYNT+I G C K  +  A +  + M 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G +PN  T+N++I G+CKKG + +ANRI  +       P+  TY +L+NG+ Q G+ +
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
              +++++ L  G++  I+ YN LI GLC++G    A  L+ ++ +    P+  TY+ +I
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A  L    I  GC P+   +  L+  +C+    D A E++  M  + M 
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           PD I  + L +GL    K E  M++F+ M  +G  P
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAP 608



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 210/443 (47%), Gaps = 26/443 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMC 189
           +P  +T  T  ++  +  K+R  ++ E + + +  +  F+     ++SI+  Y     + 
Sbjct: 362 RPDVVTYNT--VICGLCRKSRVVEAEECLHKMV--NGGFEPNDFTYNSIIDGYCKKGMVV 417

Query: 190 DSSPLVFDLLFKTYAHRK-KFRNATDTFCQMRD-------------YGFLPIIESCNKFL 235
           D++ ++ D +FK +   +  + +  + FCQ  D              G  P I   N  +
Sbjct: 418 DANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLI 477

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
             L     +  AL    EM      P+++T N++++  CK+G +  A  +  +  + G I
Sbjct: 478 KGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI 537

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + TYNTL+ G+C +  L  A++  N M   G+ P+VIT+NTL+ G CK  K  E   I
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEI 597

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F  M     +PN++TYNT+I              L  EM   G+  D++++  LI G CK
Sbjct: 598 FKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCK 657

Query: 416 EGKTKKAAYLVKDLDKNSLVPNA-STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            G    A  L + ++K   V +  +TY+ +I+    + N + A +L+  M ++GC P+ +
Sbjct: 658 VGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNY 717

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L+  FC+  + ++  + LLE +EK   P       + + L    K + A+ +   M
Sbjct: 718 TYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLM 777

Query: 535 EIRGLLPKGFDKLRTINCAPENG 557
             + ++P   D + TI  A + G
Sbjct: 778 VQKDIVP---DTVNTIFEADKKG 797



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 172/339 (50%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y  + K + A DTF +M  +   P + S N  ++ L++    + A   Y  M+  ++  +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           VYT  + + +FC+ G    A+ + +NM  +G   +   Y T+++G    G    A +  +
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M +  + P+V TFN L+   CKKG + E+ R+F ++    V PN+ T+N  I G  + G
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 344

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + +    L   + R G++ D++TYN +I GLC++ +  +A   +  +      PN  TY+
Sbjct: 345 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYN 404

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ++I G C +     A ++ K  +  G +P++  +  L++ FCQ+ D D+A  V  + L K
Sbjct: 405 SIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGK 464

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + P  I+ + L  GL   G    A++L  +M  +G  P
Sbjct: 465 GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKP 503



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 5/313 (1%)

Query: 253 EMRRN---RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           EMR N    +   VY   M  +   + G I+ AV+ F+ M+     PSV +YN +++   
Sbjct: 144 EMRSNLDNTLLEGVYVEAMRFYG--RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILV 201

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G  + A K    M+   ++ +V T+   I  FC+ G+ + A R+   M       N V
Sbjct: 202 EFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAV 261

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y T++ G+ + G+++    L++EML   +  D+ T+N L+  LCK+G   ++  L   +
Sbjct: 262 AYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKV 321

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K  + PN  T++  I G C   + +RA +L   + R G RP+   +  ++   C+    
Sbjct: 322 LKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRV 381

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
             A E L +M+     P+    + +  G    G    A ++ +    +G  P  F     
Sbjct: 382 VEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSL 441

Query: 550 INCAPENGEKESG 562
           +N   ++G+ +  
Sbjct: 442 VNGFCQDGDPDQA 454



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 67/119 (56%), Gaps = 5/119 (4%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE-VFKNME 290
           N  +S+  +   + +AL  + EM++N   P+ YT  +++  FCK G + +  + + +N+E
Sbjct: 685 NIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIE 744

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
             GFIPS+TT+  +++  C +  +  A+   +LM +  I P+  T NT IF   KKG +
Sbjct: 745 K-GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPD--TVNT-IFEADKKGHI 799


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 206/424 (48%), Gaps = 22/424 (5%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV-QTHKPSSLTLE-THSIVLHILTKNR 154
           L   S +L P  V  VL +V KD  +SL FF WV ++H+  S+    T + +L  L K R
Sbjct: 25  LAKYSRNLVPNTVGRVL-QVIKDVDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKAR 83

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           +   +  I R               D +L  +  CD++ + ++ L   +        A  
Sbjct: 84  RHHQAYQIFR---------------DELLGQH--CDTNHITYNTLIGGFCKAGDMERAFQ 126

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              +M++ G  P + + +  + +L ++  +  A+ +++E      +P+    N+++H  C
Sbjct: 127 LLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--SVECAPDSVLFNILVHGLC 184

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K   +  A ++ + M   G +P V TYN+LI G C    +  A +    M K  ++PN++
Sbjct: 185 KANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLV 244

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+NTLI+G+CK G    A+++   M  +   P+VVT+N+LI+G+ Q    +    +   M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            +     +++TYN LI GLC  G+  +A  L+ ++D   ++P+  TY++LI   C     
Sbjct: 305 KKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQI 364

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E+AFQ+   M+  G  P+   +  L     ++E FD A  +L  M +    P+    + L
Sbjct: 365 EQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSL 424

Query: 515 YSGL 518
             GL
Sbjct: 425 MEGL 428



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    ++F++L        +   A     +M + G +P + + N  +  L  S R++ A 
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEAR 228

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M + ++ PN+ T N +++ +CK G    A ++ + M   G  P V T+N+LISG 
Sbjct: 229 QLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGF 288

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C K  +  A +  +LM+K    PN++T+N LI G C  G+ +EA  + SEM    + P++
Sbjct: 289 CQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDI 348

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN+LI  + +    E    +   M+  G+  D ++Y  L + L K  +  +A  L+ +
Sbjct: 349 ITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDN 408

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +     +PN  T+++L+ G C  +  + A  L   M R GC P    +E+L++  C+   
Sbjct: 409 MFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGR 468

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D A EVL+ M+ + + P       +   L   GK +LA+  F ++
Sbjct: 469 VDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV 514



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 152/334 (45%), Gaps = 70/334 (20%)

Query: 244 VDIALGFYKEMRRNRISPNV---YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           VD++L F++ + R+    ++   +T N ++    K     +A ++F++            
Sbjct: 47  VDVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRD------------ 94

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
              L+  HC+                     N IT+NTLI GFCK G +  A ++ +EMK
Sbjct: 95  --ELLGQHCD--------------------TNHITYNTLIGGFCKAGDMERAFQLLAEMK 132

Query: 361 ATNVSPNVVT---------------------------------YNTLINGYGQVGNSEMG 387
               SP+VVT                                 +N L++G  +       
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAPDSVLFNILVHGLCKANQLSEA 192

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + EEM   GI  D++TYN+LI GLCK  + ++A  L++ + K  + PN  TY+ LI G
Sbjct: 193 RQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYG 252

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C    +  A QL + MI+SG  P+   F  L+S FCQ    D+A EVL  M +   AP+
Sbjct: 253 YCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPN 312

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + L SGL   G+   A +L  +M+ RG+LP
Sbjct: 313 LVTYNVLISGLCDAGRANEACELLSEMDGRGILP 346



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 108/263 (41%), Gaps = 37/263 (14%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   +  + K   A +    M+     P + + N  +S L D+ R + A     E
Sbjct: 279 VTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSE 338

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEV---------------------------- 285
           M    I P++ T N ++  FC+   IE+A ++                            
Sbjct: 339 MDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSER 398

Query: 286 -------FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                    NM   G IP++ T+N+L+ G C    L  A     +M + G  P   T+  
Sbjct: 399 FDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEV 458

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK G++ +A  +   M +  + P V +  T+++   + G  ++    +++++   
Sbjct: 459 LVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAE 518

Query: 399 IKVDILTYNALI--LGLCKEGKT 419
            K    +Y  L+  + + +EGK+
Sbjct: 519 SKACDPSYQKLLEFVKVLREGKS 541


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 231/485 (47%), Gaps = 11/485 (2%)

Query: 57  MKMNRNPI--PIPHRTLPE-PKGQDLDFVNIAYSHLIHS--DWKKLTALSTHLTPFRVKH 111
           M++  NP+  PI  +     PK       +   S +I S  +     ++   L+  R+++
Sbjct: 48  MEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107

Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDS 171
            ++ +++ +++   F  + + H P       H +V     K R  KS  S+L  I++   
Sbjct: 108 RVI-IERSFIVV--FRAYGKAHLPDKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEGL 163

Query: 172 FDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           +    + +D ++ S    + SP  L F+L+ K     +    A + F  M +   LP   
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           +    +  L   ER+D A+    EM+    SP+    N+++   CK G + R  ++  NM
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G +P+  TYNTLI G C KG L  A+     M  +   PN +T+ TLI G  K+ + 
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A R+ S M+      N   Y+ LI+G  + G +E   SL+ +M   G K +I+ Y+ L
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           + GLC+EGK  +A  ++  +  +  +PNA TYS+L+ G       E A Q++K M ++GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
             NK  + +L+   C       A  V  +ML   + PD++  S +  GL   G  + A+K
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523

Query: 530 LFRKM 534
           L+ +M
Sbjct: 524 LYHEM 528



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 186/393 (47%), Gaps = 13/393 (3%)

Query: 156 FKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           FK  +S L  +++S      FD   KL   I    R+       F ++F+ Y        
Sbjct: 73  FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS--FIVVFRAYGKAHLPDK 130

Query: 212 ATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFY-----KEMRRNRISPNVYT 265
           A D F +M D +     ++S N  L+ +++       L FY       M  N ISPN  +
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLS 189

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+V+ A CKL  ++RA+EVF+ M     +P   TY TL+ G C +  +  A+   + M+
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G  P+ + +N LI G CKKG L    ++   M      PN VTYNTLI+G    G  +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
              SL E M+ +    + +TY  LI GL K+ +   A  L+  +++     N   YS LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
           +G      +E A  L++ M   GC+PN  ++ +L+   C+    + A E+L  M+     
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           P++   S L  G    G  E A++++++M+  G
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 14/390 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   +  D    L D +      C  SP+++++L      +      T     M 
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEM--QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +  L    ++D A+   + M  ++  PN  T   +++   K     
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV +  +ME  G+  +   Y+ LISG   +G    AM     M + G +PN++ ++ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GK +EA  I + M A+   PN  TY++L+ G+ + G  E    +++EM + G  
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +   Y+ LI GLC  G+ K+A  +   +    + P+   YS++I G C   + + A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524

Query: 461 YKSMI---RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI----ILSE 513
           Y  M+       +P+   + +L+   C  +D  RA ++L  ML++   PD I     L+ 
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584

Query: 514 LYSGLHHCGK-----DELAMKLFRKMEIRG 538
           L    + C K     +EL ++L ++  + G
Sbjct: 585 LSEKSNSCDKGRSFLEELVVRLLKRQRVSG 614



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 24/279 (8%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++ +L        K   A   + +M + G  P I   +  +  L    + + A      M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             +   PN YT + +M  F K G+ E AV+V+K M+  G   +   Y+ LI G C  G +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM---KATNVSPNVVTY 371
             AM   + M   GI+P+ + ++++I G C  G +  A +++ EM   +     P+VVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA---------------------LI 410
           N L++G     +      L   ML  G   D++T N                      L+
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           + L K  +   A  +V+ +    L P  ST++ ++   C
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 32/151 (21%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP------LVFDLLFKTYAHRKKFRNATD 214
           SI++G+    S D   KL+  +L     C   P      + +++L      +K    A D
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEML-----CQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLD-SERVDIALGFYKEM-----RRNRIS-------- 260
               M D G  P + +CN FL++L + S   D    F +E+     +R R+S        
Sbjct: 562 LLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621

Query: 261 -------PNVYTLNMVMHAFCKLGIIERAVE 284
                  P   T  M++   CK   I  A++
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAAID 652


>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 532

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 196/406 (48%), Gaps = 24/406 (5%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F + E ++R +      DL   +   +     + DS  L F  L  ++A   KF  A   
Sbjct: 93  FSTYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGF--LVTSFAQAGKFDLAKKL 150

Query: 216 FCQMRDYGFLPIIES--CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             +++  G    I S   N  L+ L+   +V  A+  +KE       PN +T N+++   
Sbjct: 151 IIEVQ--GEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGL 208

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPN 332
           C++G +E+  E+F  M+S G +P V TYNTLISG C    L  A    K +  +N   P+
Sbjct: 209 CRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPD 268

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T+ ++I GF K GKL  A+ +F EM  + + P VVT+N LI+G+G++GN     +++E
Sbjct: 269 VMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHE 328

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           +M       D++T+ +LI G C+ G  +    +   +   ++ PN  TYS +I   C   
Sbjct: 329 KMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDN 388

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               A  L + +  S   P   I+  ++  FC+  + D A  ++ EM EK   PD +  +
Sbjct: 389 RIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFT 448

Query: 513 ELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPEN 556
            L  G  HC K  +  A+ +F+KM               I CAP+N
Sbjct: 449 ILIIG--HCMKGRMVEALDIFKKM-------------LAIGCAPDN 479



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 137/304 (45%), Gaps = 36/304 (11%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L +      +     + F  M+ +G LP + + N  +S L  +  +D A    KE++
Sbjct: 201 FNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQ 260

Query: 256 -RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-------------------- 294
            RN  SP+V T   ++  F KLG +E A  +F+ M   G                     
Sbjct: 261 SRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNM 320

Query: 295 ---------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                          IP V T+ +LI G+C  G + L +K  ++M+   + PN+ T++ +
Sbjct: 321 VAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVI 380

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   CK  ++HEA  +  ++K ++V P    YN +I+G+ + GN +    +  EM     
Sbjct: 381 INALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRC 440

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + D +T+  LI+G C +G+  +A  + K +      P+  T S+L+           AF 
Sbjct: 441 RPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAFH 500

Query: 460 LYKS 463
           + ++
Sbjct: 501 IVQT 504



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 22/304 (7%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           SE+++  L  ++ ++R   +P V    +    FC+L              +   I   +T
Sbjct: 53  SEKLNDPLVAFEVIKRLNNNPQV---GLKFMEFCRL--------------NFSLIHCFST 95

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
           Y  LI   C  GL  L       M  +G  I   V+ F  L+  F + GK   A ++  E
Sbjct: 96  YELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGF--LVTSFAQAGKFDLAKKLIIE 153

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           ++      +   YN L+N   + G       L++E L      +  T+N LI GLC+ G+
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSGCRPNKHIFE 477
            +K   L   +     +P+  TY+ LI+G C     +RA  L K +  R+ C P+   + 
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            ++S F +    + A+ +  EM+   + P  +  + L  G    G    A  +  KM   
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASY 333

Query: 538 GLLP 541
             +P
Sbjct: 334 SCIP 337


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+PN YT   V+  +CK+G ++ AV+VF  M 
Sbjct: 523 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 582

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + P    YN LI G+C++G L  A+ +++ M + G+   V T+N L+      G+ 
Sbjct: 583 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 642

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    ++P+V TYN LING+ + GN +    ++E M R G++  ++TY AL
Sbjct: 643 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 702

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  L K+G+ ++   L  +  +  + P+   Y+ALI       N +RAF++   M +   
Sbjct: 703 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 762

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C     D A +++ EM E+ + PD +  + L SG    G  + A++
Sbjct: 763 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 822

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 823 IRNEMMNKGFNP 834



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 6/312 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-E 290
           N  L  L  + +   AL   ++M R    PN  T N V+  FC  G ++ A+++ + M E
Sbjct: 492 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 547

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
             G  P+  TY T+ISG C  G +  A+K F  ++ K  ++P  + +N LI G+C +GKL
Sbjct: 548 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 607

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A      M    V+  V TYN L++     G       L EEM   G+  D+ TYN L
Sbjct: 608 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 667

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G CKEG  KKA  + +++ +  +     TY+ALI     +   +   +L+   +R G 
Sbjct: 668 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 727

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           RP+  ++  L+++   + + DRA E++ EM +K +APD +  + L  GL   G+ + A K
Sbjct: 728 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 787

Query: 530 LFRKMEIRGLLP 541
           L  +M  RG+ P
Sbjct: 788 LIDEMTERGIQP 799



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 146/287 (50%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    D  ++D AL +   M    ++  V T N+++HA    G    A E+ + M  
Sbjct: 595 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 654

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V TYN LI+GHC +G +  A++    M + G++  V+T+  LI+   KKG++ E
Sbjct: 655 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 714

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            +++F E     + P++V YN LIN +   GN +    +  EM +  I  D +TYN L+ 
Sbjct: 715 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 774

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+  +A  L+ ++ +  + P+  TY+ LI+G  ++ + + A ++   M+  G  P
Sbjct: 775 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               +  L+   C+N   D A  ++ EM+E  + PD      L  GL
Sbjct: 835 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 158/333 (47%), Gaps = 38/333 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   K+FD +L    +     ++++ L   Y  + K   A     +M 
Sbjct: 560 TVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDRMV 618

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + N  + +L    R   A    +EM    ++P+V+T N++++  CK G ++
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 678

Query: 281 RAVEVFKNMESMGFIPSVTTY-----------------------------------NTLI 305
           +A+E+F+NM   G   +V TY                                   N LI
Sbjct: 679 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 738

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           + H   G +  A +    MEK  I P+ +T+NTL+ G C  G++ EA ++  EM    + 
Sbjct: 739 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 798

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++VTYNTLI+GY   G+ +    +  EM+  G    +LTYNALI GLCK G+   A  +
Sbjct: 799 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 858

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           VK++ +N + P+ STY +LI G  +    ERA 
Sbjct: 859 VKEMVENGITPDDSTYISLIEG--LTTEDERAI 889



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNASTYSALITGQCVR 451
           E+LR   + + +TYN +I G C  G+ + A  +++++ ++  + PN  TY  +I+G C  
Sbjct: 509 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 568

Query: 452 KNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              + A +++  M+  G  +P   ++  L+  +C     D A      M+E+ +A     
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L   L   G+   A +L  +M  +GL P  F
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 192/379 (50%), Gaps = 8/379 (2%)

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKFRNATDTFC-QMRDY 222
           D+ SF     + D++ Y   M    P    + F+ L       + + +A  +   QM   
Sbjct: 95  DASSF---RNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELA 151

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P   + +  ++     +RVD+      ++ +  +   + T N +++  CK+G   +A
Sbjct: 152 GLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQA 211

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           VE+F +M + G+ P V TY T+I+G C  G    A      M + G QP+V+T++T+I  
Sbjct: 212 VELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDS 271

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK  +++EA  IFS MKA  +SPN+ TYN+LI G          +++  EM+   I  +
Sbjct: 272 LCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPN 331

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+T++ LI   CKEG   +A  ++K + +  + PN  TYS+L+ G  ++     A +L+ 
Sbjct: 332 IVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFD 391

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI  GC+P+   + +L++ +C+ +    A ++  EM+ + + PD +  + L  GL   G
Sbjct: 392 VMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLG 451

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +   A  LF+ M   G LP
Sbjct: 452 RLREAHDLFKNMLTNGNLP 470



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 176/353 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  +  +    ++   A D F  M+  G  P I + N  +  L +  R   A 
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    I PN+ T +++++ FCK G +  A  V K M  MG  P+V TY++L++G+
Sbjct: 318 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 377

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +  +  A K  ++M   G +P+V ++N LI G+CK  ++ EA ++F+EM    ++P++
Sbjct: 378 SLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 437

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YNTLI+G  Q+G       L++ ML NG   D+ TY+ L+ G CK+G   KA  L + 
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 497

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN   Y+ LI   C  +N + A +L+  +   G +PN  I+  +++  C+   
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D A E    M E    P+    + +  G      +  A++L  +M  +G + 
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVA 610



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 179/333 (53%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M + G  P + + +  + SL    RV+ AL  +  M+   ISPN++T N ++ 
Sbjct: 246 AAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 305

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C       A  +   M S+  +P++ T++ LI+  C +G +  A      M + G++P
Sbjct: 306 GLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 365

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+T+++L+ G+  + ++ EA ++F  M      P+V +YN LINGY +         L+
Sbjct: 366 NVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 425

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM+  G+  DI++YN LI GLC+ G+ ++A  L K++  N  +P+  TYS L+ G C +
Sbjct: 426 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 485

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +AF+L+++M  +  +PN  ++ +L+   C++ +   A ++  E+  + + P+  I 
Sbjct: 486 GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIY 545

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + + +GL   G  + A++ FR ME  G  P  F
Sbjct: 546 TTIINGLCKEGLLDEALEAFRNMEEDGCPPNEF 578



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV-EVFKNMESMGFIPSVTTYN 302
           +D AL ++  M   +  P +   N ++ A  K+     AV  + K ME  G  P   T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 303 TLISGHCNKGLLSLAMKFKNLME--KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            LI  +C   L  + + F  L +  K G+Q  ++TFNTLI G CK GK  +A  +F +M 
Sbjct: 162 MLI--NCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMV 219

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           A    P+V TY T+ING  ++G +   A L+ +M   G + D++TY+ +I  LCK+ +  
Sbjct: 220 ARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVN 279

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A  +   +    + PN  TY++LI G C       A  +   M+     PN   F +L+
Sbjct: 280 EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLI 339

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + FC+  +   A  VL  M E  + P+ +  S L +G     +   A KLF  M  +G  
Sbjct: 340 NIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCK 399

Query: 541 PKGF 544
           P  F
Sbjct: 400 PDVF 403



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 123/247 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y+ + +   A   F  M   G  P + S N  ++    ++R+  A   + E
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P++ + N ++   C+LG +  A ++FKNM + G +P + TY+ L+ G C +G 
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A +    M+   ++PN++ +N LI   CK   L EA ++FSE+    + PNV  Y T
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  + G  +     +  M  +G   +  +YN +I G  +     +A  L+ ++ +  
Sbjct: 548 IINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607

Query: 434 LVPNAST 440
            V + +T
Sbjct: 608 FVADVAT 614



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 106/229 (46%), Gaps = 2/229 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLFD ++   + C      +++L   Y   K+   A   F +M   G  P I S N  + 
Sbjct: 388 KLFDVMIT--KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLID 445

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L    R+  A   +K M  N   P++ T ++++  FCK G + +A  +F+ M+S    P
Sbjct: 446 GLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKP 505

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  YN LI   C    L  A K  + +   G+QPNV  + T+I G CK+G L EA   F
Sbjct: 506 NMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAF 565

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             M+     PN  +YN +I G+ Q  +      L  EM   G   D+ T
Sbjct: 566 RNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score = 38.5 bits (88), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 48/109 (44%)

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +R   +    L K M  +G  P+ +   ML++ F Q +  D    VL ++++  +    +
Sbjct: 134 MRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIV 193

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             + L +GL   GK   A++LF  M  RG  P        IN   + GE
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE 242


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 170/348 (48%), Gaps = 4/348 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+L G    +  +    LFD IL   ++    + + +  L +     +   +A + F QM
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFK---PNVVTYTTLIRCLCKNRHLNHAVELFNQM 214

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P + + N  ++ L +  R   A    ++M + RI PNV T   ++ AF K+G +
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E++  M  M   P V TY +LI+G C  GLL  A +   LME+NG  PN + + TL
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFCK  ++ +  +IF EM    V  N +TY  LI GY  VG  ++   ++ +M     
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI TYN L+ GLC  GK +KA  + + + K  +  N  TY+ +I G C     E AF 
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           L+ S+   G +PN   +  ++S FC+      A  +  +M E    P+
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 4/347 (1%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  +F +A D F +M     LP I    + LS +    R D+ +  +++M+   I P + 
Sbjct: 60  HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLC 119

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N+VMH  C      RA      M  +GF P + T+ +L++G+C+   +  A+   + +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G +PNV+T+ TLI   CK   L+ A  +F++M      PNVVTYN L+ G  ++G  
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
              A L  +M++  I+ +++T+ ALI    K GK  +A  L   + + S+ P+  TY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+    + A Q++  M R+GC PN+ I+  L+  FC+++  +   ++  EM +K +
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
             ++I  + L  G    G+ ++A ++F +M  R   P     +RT N
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP----DIRTYN 402



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 184/384 (47%), Gaps = 2/384 (0%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R F S   ILR  L +  F+    LF  +++S  +   S + F  L    A   ++    
Sbjct: 46  RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPL--PSIIDFTRLLSVIAKMNRYDVVI 103

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
             F QM+  G  P++ +CN  +  +  S +   A  F  +M +    P++ T   +++ +
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C    IE A+ +F  +  MGF P+V TY TLI   C    L+ A++  N M  NG +PNV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T+N L+ G C+ G+  +A  +  +M    + PNV+T+  LI+ + +VG       LY  
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M++  +  D+ TY +LI GLC  G   +A  +   +++N   PN   Y+ LI G C  K 
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E   +++  M + G   N   + +L+  +C     D A EV  +M  +   PD    + 
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403

Query: 514 LYSGLHHCGKDELAMKLFRKMEIR 537
           L  GL   GK E A+ +F  M  R
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKR 427



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   Y H  +  +A   F Q+   GF P + +    +  L  +  ++ A+  + +
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N   PNV T N ++   C++G    A  + ++M      P+V T+  LI      G 
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +  N+M +  + P+V T+ +LI G C  G L EA ++F  M+     PN V Y T
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ +    E G  ++ EM + G+  + +TY  LI G C  G+   A  +   +    
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ L+ G C     E+A  +++ M +     N   + +++   C+    + A 
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++   +  K M P+ I  + + SG    G    A  LF+KM+  G LP
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + F  L   +    K   A + +  M      P + +    ++ L     +D 
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +  M RN   PN      ++H FCK   +E  +++F  M   G + +  TY  LI 
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G   +A +  N M      P++ T+N L+ G C  GK+ +A  IF  M+   +  
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+VTY  +I G  ++G  E    L+  +   G+K +++TY  +I G C+ G   +A  L 
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491

Query: 427 KDLDKNSLVPNASTY 441
           K + ++  +PN S Y
Sbjct: 492 KKMKEDGFLPNESVY 506


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 108/329 (32%), Positives = 160/329 (48%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S N  L  L  S R D   G Y +M      PN YT   ++ + C+    E A  VF+ M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            + G  P+V +Y+ LI+G C    +  A +  N M   G QPNV+T+ +L+ G CK GKL
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +FS M      P+ V YN LI+G+ + G+      L+EEML  G    + TYN+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           + G  ++G+  +   L KD+ +   VPN  T++ L+ G C   +   A +L+  M   GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C       A  +L EM+   + PD +  + L  G    G  + A+K
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 530 LFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           LF ++   GL P  F     I+C    G+
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 170/360 (47%), Gaps = 18/360 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+  +L  L + ++F+ + S+ RG+                  + + C  +   + +L  
Sbjct: 54  TYGYLLRSLCQAQRFEEARSVFRGM------------------AAQGCSPNVFSYSILIA 95

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                +K   A +   +M D G  P + +    LS L    ++  A+  +  M      P
Sbjct: 96  GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +    N+++  F K G +  A  +F+ M   G IP+V TYN+L+SG   KG         
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G  PN+ TFN L+ GFCK G + EA+R+F EM++    P+VV+YNTL+ G    
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSK 275

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L  EM+R+G+  DI++YN LI G  K G    A  L  ++ K+ L P+A +Y
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S +I   C       AF ++K MI +G  P+  +   L+   C+ E    + E+   M++
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 172/348 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++ L +  A   +  +   T+  M   G +P   +    L SL  ++R + A   ++ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SPNV++ ++++   C+   ++ A E+   M   G  P+V TY +L+SG C  G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   + M   G  P+ + +N LI GF KKG + EA R+F EM      P V TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+ + G      SL+++MLR G   +I T+N L+ G CK G   +A  L  ++    
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  +Y+ L+ G C +     A +L + MIRSG  P+   + +L+  + ++   D A 
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  E+ +  + PD+   S +   L   GK   A  +F+ M   G  P
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/411 (24%), Positives = 186/411 (45%), Gaps = 18/411 (4%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           + FF W  +    +    +++ +L +L K+ +          +L +              
Sbjct: 1   MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAG------------- 47

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                C  +   +  L ++    ++F  A   F  M   G  P + S +  ++ L   ++
Sbjct: 48  -----CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQK 102

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD A     EM      PNV T   ++   CK+G ++ AV++F  M   G  P    YN 
Sbjct: 103 VDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNV 162

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G   KG +  A +    M + G  P V T+N+L+ GF +KG+      +F +M    
Sbjct: 163 LIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             PN+ T+N L++G+ ++G+      L+ EM   G   D+++YN L+ G+C +GK  +A 
Sbjct: 223 CVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQ 282

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++++ ++ + P+  +Y+ LI G       + A +L+  + +SG  P+   +  ++   
Sbjct: 283 RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCL 342

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           C+      A  V  +M+    APD+ ++  L  GL    +   + +LF+ M
Sbjct: 343 CRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 165/332 (49%), Gaps = 2/332 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G+           LF  ++Y  R C    +V+++L   ++ +     A   F +M 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVY--RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P + + N  LS              +K+M R    PN++T N ++  FCK+G + 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F  M S+G  P V +YNTL+ G C+KG    A +    M ++G+ P+++++N LI
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+ K G L  A ++F E+  + + P+  +Y+T+I+   + G       ++++M+ NG  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D      L++GLC+  +  ++  L + + K   VP    Y+ L+   C  K S+   ++
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEI 424

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           +  +   G  P+  I ++++ T  +++D + A
Sbjct: 425 FHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 96/213 (45%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
             +++N L+    K G+       +++M      PN  TY  L+    Q    E   S++
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
             M   G   ++ +Y+ LI GLC+  K  +AA L+ ++      PN  TY +L++G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + A  L+  M+  GC P+  ++ +L+  F +  D   A  +  EMLEK   P     
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L SG    G+      LF+ M  +G +P  F
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 187/373 (50%), Gaps = 5/373 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +LRG+  S+  +   +L   +      C     +++ L   Y+  K F  A     +M  
Sbjct: 16  LLRGLCRSNQLEKARQLLGRM--KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK 73

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
              LP + +    +  L  + R   A+    EMR    SPN+YT N+++   C+   ++ 
Sbjct: 74  NHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDE 133

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A ++ + M   G+ P V TYN+ I G C    +  A KF   + +  + P+V+++ T+I 
Sbjct: 134 AKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVIN 190

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK G L  A+R+  +M     +P+VVTY++LI+G+ + G  E    L + ML+ G + 
Sbjct: 191 GLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 250

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ YN+L+  L + G   KA  ++ ++++    P+  +Y+A I G C  +  ++A  ++
Sbjct: 251 NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVF 310

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+  GC PN   + ML+   C+ ++ D A  ++ +  EK    D ++ + L  GL   
Sbjct: 311 DRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKG 370

Query: 522 GKDELAMKLFRKM 534
           G+ + A  LF K+
Sbjct: 371 GRFDEACALFSKV 383



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 177/389 (45%), Gaps = 40/389 (10%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   ++++ +     +K   A     +M   G+ P + + N F+  L   +RVD A 
Sbjct: 111 CSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR 170

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F   + R  ++P+V +   V++  CK G ++ A  +   M + G  P V TY++LI G 
Sbjct: 171 KF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGF 227

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  AM   + M K G +PN++ +N+L+    + G + +A  +  EM+    +P+V
Sbjct: 228 CKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 287

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIK---------------------------- 400
           V+YN  I+G  +    +   ++++ M+  G                              
Sbjct: 288 VSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQ 347

Query: 401 -------VDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRK 452
                  VDIL Y  L+ GLCK G+  +A A   K LD+    P+   Y+ ++   C R+
Sbjct: 348 AREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR 407

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             ++A Q++K M+   C  N   + +L+   C ++    A  +LL M+++   PD +   
Sbjct: 408 QIDKALQIHKQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYG 466

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L   +  CGK   A++LF +    G +P
Sbjct: 467 TLVDAMCKCGKSAAALELFEEAVKGGCVP 495



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 139/282 (49%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+ +T  +++   C+   +E+A ++   M+ MG +P    YN LISG+        A K
Sbjct: 7   QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   M KN   P V+T+  ++ G CK G+  +A ++  EM+    SPN+ TYN ++ G  
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +    +    + EEM   G   D++TYN+ I GLCK  +  +A    K L +  + P+  
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEAR---KFLARMPVTPDVV 183

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ +I G C   + + A ++   M   GC P+   +  L+  FC+  + +RA  +L  M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L+    P+ +  + L   LH  G    A  +  +ME RG  P
Sbjct: 244 LKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTP 285



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/413 (23%), Positives = 171/413 (41%), Gaps = 49/413 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G       +    L DS+L     C  + + ++ L            A D   +M 
Sbjct: 222 SLIDGFCKGGEVERAMGLLDSMLK--LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK----- 275
             GF P + S N  +  L  +ERV  A   +  M     +PN  + +M++   CK     
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339

Query: 276 --LGIIERAVEVFKNMESMGFI-----------------------------PSVTTYNTL 304
             + ++E+A E ++ ++ + +                              P V  YN +
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 399

Query: 305 ISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +  HC +  +  A++  K ++E+N    NV+T+N L+ G C   +L +A  +   M    
Sbjct: 400 LDSHCKRRQIDKALQIHKQMLERNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 457

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+ VTY TL++   + G S     L+EE ++ G   D++TY+ALI GL  E   ++A 
Sbjct: 458 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 517

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS-T 482
            L   LD        + ++A+I G     + +   +L+  +I S   PN   F   +S  
Sbjct: 518 LLFTKLD-------VALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGK 570

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
             + E   +A  +    ++    PD  + + L      CG  E A ++F  M+
Sbjct: 571 LVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 74/148 (50%)

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+    + D  T+  L+ GLC+  + +KA  L+  + +   VP+ + Y+ALI+G    K+
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             +AF+    M+++ C P    +  ++   C+      A ++L EM +K  +P+    + 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  GL    K + A K+  +M +RG  P
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFP 148


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 203/400 (50%), Gaps = 4/400 (1%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-FDLLFK 201
           + + +HIL + +    + S+LR  L    F   S +F S+L +   CD + L   DLL  
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRH-LALTGFSC-SAIFSSLLRTISRCDPTNLFSVDLLVN 168

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K  +A      M + GF   + SCN  L++L+   + +    F KE    +   
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPL 228

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V T N+V+++ C  G + +A  + + M++   +P+  TYNT+++ +  KG    A++  
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR-LPNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + MEKNGI+ ++ T+N +I   CK  +   A  +   M+  N++P+  +YNTLI+G+   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G   +   ++ +MLR  +K  + TY ALI G C+ G+T +A  ++ ++    + P+  TY
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           SAL+ G C       A  L K +       N+ ++ +L+  FCQ  +  +A ++L  ML 
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + PD I  S L +G+   G      ++  +M+  G+LP
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLP 507



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 206/461 (44%), Gaps = 57/461 (12%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSY---RMCDSSP 193
           L + T +IVL+ L    K   +ES+L+ + +     LP+ + +++IL  Y     C S+ 
Sbjct: 228 LDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR---LPNAVTYNTILNWYVKKGRCKSAL 284

Query: 194 LVFDLLFKT--YAHRKKFRNATDTFCQ-------------MRDYGFLPIIESCNKFLSSL 238
            + D + K    A    +    D  C+             MR+    P   S N  +   
Sbjct: 285 RILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGF 344

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               ++++A+  + +M R  + P+V T   ++  +C+ G  + A  V   M+  G  PS 
Sbjct: 345 FGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSE 404

Query: 299 TTYNTLISGHCNK-----------------------------------GLLSLAMKFKNL 323
            TY+ L++G+C                                     G +S A +    
Sbjct: 405 LTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKC 464

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M  +GI P+VIT++ LI G CK G +HE   I S M+ + V PN V Y TL+  + + G+
Sbjct: 465 MLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGH 524

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           ++     + ++ R+G+  + + +NAL+    +EG   +A    + + +  +  + ++++ 
Sbjct: 525 AKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNC 584

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           +I   C R N   AF +Y +M+R G  P+   +  L+   CQ     +A E ++ +LEK 
Sbjct: 585 IIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKA 644

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            A D   L+ L  G+   G  + A+ L  KM  R +LP  +
Sbjct: 645 CAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 685



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 185/412 (44%), Gaps = 37/412 (8%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G       +L   +F+ +L   +    S   +  L   Y    +   A     
Sbjct: 336 SYNTLIHGFFGEGKINLAIYIFNQMLR--QSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M+  G  P   + +  L+      ++  AL   K +R   IS N     +++  FC+LG
Sbjct: 394 EMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLG 453

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A ++ K M + G  P V TY+ LI+G C  G++    +  + M+K+G+ PN + + 
Sbjct: 454 EVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYT 513

Query: 338 TLIFGFCKKGKLHEANRIFSE-----------------------------------MKAT 362
           TL+F FCK G   EA + F +                                   M   
Sbjct: 514 TLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRM 573

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            +S +V ++N +I+ Y Q GN     S+Y+ M+R+G   DI TY +L+ GLC+ G   +A
Sbjct: 574 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 633

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              +  L + +   +  T + L+ G C     + A  L + M+     P+ + + +L+  
Sbjct: 634 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 693

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           FC+      A  +L  MLEK + PD+I  + L +GL + G+ + A  +F+++
Sbjct: 694 FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 745



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 158/350 (45%), Gaps = 36/350 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L S      +  A  F + M R +IS +V + N ++ ++C+ G +  A  V+ NM  
Sbjct: 548 NALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 607

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G+ P + TY +L+ G C  G L  A +F   + +     +  T NTL+ G CK G L E
Sbjct: 608 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 667

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +  +M   N+ P+  TY  L++G+ + G       L + ML  G+  D + Y  L+ 
Sbjct: 668 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLN 727

Query: 412 GLCKEGKTKKAAY------------------------------------LVKDLDKNSLV 435
           GL  EG+ K A+Y                                    L++++ +N + 
Sbjct: 728 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 787

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P++++Y+ L+ G   +    R   LY+ M++ G +P+   + +L+   C+    + A + 
Sbjct: 788 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 847

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           L +M+ + + PD++    L        K   A++LF  M+  G +   F+
Sbjct: 848 LEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFE 897



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 144/311 (46%), Gaps = 20/311 (6%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  +     +D AL   ++M    I P+ YT  +++  FCK G +  A+ + + M  
Sbjct: 653 NTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            G +P    Y  L++G  N+G +  A   F+ ++ K G+  + I +N+++ G+ K G+++
Sbjct: 713 KGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQIN 772

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           E  R+   M    V P+  +YN L++GY + G       LY +M++ GIK D +TY  LI
Sbjct: 773 EIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLI 832

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLC+ G  + A   ++ +    + P+   +  LI     +     A QL+  M   G  
Sbjct: 833 FGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVG-- 890

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
                            D D A E+  +M    + P  +  S +  GL  CGK E A+ +
Sbjct: 891 -----------------DIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 933

Query: 531 FRKMEIRGLLP 541
           F  +   G++P
Sbjct: 934 FSSIMRAGMVP 944



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 180/402 (44%), Gaps = 19/402 (4%)

Query: 157  KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
            K+  ++L GI    + D    L + ++    + D+    + +L   +  R K   A    
Sbjct: 650  KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT--YTYTILLDGFCKRGKVVPALILL 707

Query: 217  CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCK 275
              M + G +P   +    L+ L++  +V  A   ++E+  +  +  +    N +M+ + K
Sbjct: 708  QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767

Query: 276  LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
             G I     + +NM      PS  +YN L+ G+  KG LS  +     M K GI+P+ +T
Sbjct: 768  GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827

Query: 336  FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ--------------- 380
            +  LIFG C+ G +  A +   +M    V P+ + ++ LI  + +               
Sbjct: 828  YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887

Query: 381  -VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             VG+ +    L E+M   G+    +  ++++ GLCK GK ++A  +   + +  +VP  +
Sbjct: 888  WVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIA 947

Query: 440  TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            T++ L+ G C     + AF L + M   G + +   + +L++  C  +    A ++  EM
Sbjct: 948  TFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 1007

Query: 500  LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              K + P+      L   ++  G  +   KL + +E RG++P
Sbjct: 1008 KSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVP 1049



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 52/295 (17%)

Query: 232  NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            N  ++  L   +++      + M  N + P+  + N++MH + K G + R + ++++M  
Sbjct: 759  NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 818

Query: 292  MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
             G  P   TY  LI G C  GL+ +A+KF   M   G+ P+ + F+ LI  F +K K+  
Sbjct: 819  EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 878

Query: 352  ANRIFS----------------EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            A ++FS                +MKA  V P+ V  ++++ G  + G  E    ++  ++
Sbjct: 879  ALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIM 938

Query: 396  RNG-----------------------------------IKVDILTYNALILGLCKEGKTK 420
            R G                                   +KVD++TYN LI GLC +    
Sbjct: 939  RAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCIC 998

Query: 421  KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN-KH 474
             A  L +++    L+PN +TY  L          +   +L K +   G  P+ KH
Sbjct: 999  DALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKH 1053


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 212/463 (45%), Gaps = 52/463 (11%)

Query: 112 VLLKVQKDYVLS--LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS 169
           VL +++ D  LS  L FF+ +        T  T+ +++  L +  +    + IL+  +  
Sbjct: 44  VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ-MKM 102

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D  +    LF  I+  Y+   S+                   A   F ++ ++G  P + 
Sbjct: 103 DGINCCEDLFICIINGYKRVGSA-----------------EQALKMFYRIGEFGCKPTVR 145

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
             N  L +LL   +  +    Y  M+++ + PNV+T N+++ A CK   ++ A ++F  M
Sbjct: 146 IYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEM 205

Query: 290 ESMG------------------------------FIPSVTTYNTLISGHCNKGLLSLAMK 319
            + G                              F PSV  YN LI G C +G + +A+K
Sbjct: 206 SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M  NG+ PNV++++ +I   C  G +  A  +F++M       N+ T+  LI G  
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G       L++ M+++G + +++ YN LI GLC  G  ++A  +   + ++  +PN +
Sbjct: 326 MRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVT 385

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G     +   A + +  MI  GCRPN   +  ++   C+N  FD+A  ++ +M
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM 445

Query: 500 -LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            LE C  P++I  +    GL   G+ E AMKL  +M+  G LP
Sbjct: 446 TLEGC-TPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 7/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ +  +D  D   KLF  +  S + C    + +  +  +     K  +A +   +   
Sbjct: 185 LLKALCKNDRVDAAHKLF--VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR--- 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             F P +   N  +  +    R+++A+    EM  N + PNV + + ++++ C  G +E 
Sbjct: 240 --FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F  M   G   ++ T+  LI G   +G L  A+    LM ++G +PNV+ +NTLI 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  G L EA ++  +M+ +   PNV TY+ LI+G+ + G+    +  +  M+ +G + 
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TY  ++  LCK     +A  LV+ +      PN  T++  I G C     E A +L 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLL 477

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC PN   +  L+    +   ++ A  +  E+  + + P+ +  + +  G    
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G    A++LF K  +RG  P
Sbjct: 538 GMMGEALQLFGKALVRGTAP 557



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 158/362 (43%), Gaps = 38/362 (10%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S   I+  +  S + +L   LF  +    R CD++   F  L K    R K   A D + 
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFL--RGCDANIHTFTPLIKGCFMRGKLYEALDLWK 338

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P + + N  +  L  +  ++ AL    +M+R+   PNV T ++++  F K G
Sbjct: 339 LMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398

Query: 278 IIERAVEVFKNMESMGFIPSVTTY-----------------------------------N 302
            +  A E +  M S G  P+V TY                                   N
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFN 458

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T I G C  G +  AMK    M+ +G  PN+ T+N L+    +  K  EA  +F E++A 
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEAR 518

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           N+ PN+VTYNT++ G+ + G       L+ + L  G   D +TYN +I   CK+GK K A
Sbjct: 519 NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578

Query: 423 AYLVKDLDK-NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A LV+ +       P+  TY++LI G C   N E A       I  G  PN   +  L+ 
Sbjct: 579 AQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638

Query: 482 TF 483
            F
Sbjct: 639 CF 640



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 188/406 (46%), Gaps = 14/406 (3%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILYSYRM 188
           T++I+L  L KN +  ++  +   + +               S     K+ D+   + R 
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
             S P V++ L        +   A     +M D G  P + S +  ++SL  S  V++A 
Sbjct: 241 KPSVP-VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M       N++T   ++      G +  A++++K M   G  P+V  YNTLI G 
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G L  A++  + M+++G  PNV T++ LI GF K G L  A+  ++ M +    PNV
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  +++   +    +   SL E+M   G   + +T+N  I GLC  G+ + A  L++ 
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +  +  +PN +TY+ L+         E AF L++ +     +PN   +  ++  F +   
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              A ++  + L +  APDSI  + +       GK ++A +L  ++
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+PN YT   V+  +CK+G ++ AV+VF  M 
Sbjct: 518 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 577

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + P    YN LI G+C++G L  A+ +++ M + G+   V T+N L+      G+ 
Sbjct: 578 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 637

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    ++P+V TYN LING+ + GN +    ++E M R G++  ++TY AL
Sbjct: 638 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 697

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  L K+G+ ++   L  +  +  + P+   Y+ALI       N +RAF++   M +   
Sbjct: 698 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 757

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C     D A +++ EM E+ + PD +  + L SG    G  + A++
Sbjct: 758 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 817

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 818 IRNEMMNKGFNP 829



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 159/312 (50%), Gaps = 6/312 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-E 290
           N  L  L  + +   AL   ++M R    PN  T N V+  FC  G ++ A+++ + M E
Sbjct: 487 NIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRE 542

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
             G  P+  TY T+ISG C  G +  A+K F  ++ K  ++P  + +N LI G+C +GKL
Sbjct: 543 RGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKL 602

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A      M    V+  V TYN L++     G       L EEM   G+  D+ TYN L
Sbjct: 603 DTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNIL 662

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G CKEG  KKA  + +++ +  +     TY+ALI     +   +   +L+   +R G 
Sbjct: 663 INGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGI 722

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           RP+  ++  L+++   + + DRA E++ EM +K +APD +  + L  GL   G+ + A K
Sbjct: 723 RPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARK 782

Query: 530 LFRKMEIRGLLP 541
           L  +M  RG+ P
Sbjct: 783 LIDEMTERGIQP 794



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 146/287 (50%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    D  ++D AL +   M    ++  V T N+++HA    G    A E+ + M  
Sbjct: 590 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 649

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V TYN LI+GHC +G +  A++    M + G++  V+T+  LI+   KKG++ E
Sbjct: 650 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 709

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            +++F E     + P++V YN LIN +   GN +    +  EM +  I  D +TYN L+ 
Sbjct: 710 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 769

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+  +A  L+ ++ +  + P+  TY+ LI+G  ++ + + A ++   M+  G  P
Sbjct: 770 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               +  L+   C+N   D A  ++ EM+E  + PD      L  GL
Sbjct: 830 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 38/334 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   K+FD +L    +     ++++ L   Y  + K   A     +M 
Sbjct: 555 TVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDRMV 613

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + N  + +L    R   A    +EM    ++P+V+T N++++  CK G ++
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 673

Query: 281 RAVEVFKNMESMGFIPSVTTY-----------------------------------NTLI 305
           +A+E+F+NM   G   +V TY                                   N LI
Sbjct: 674 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 733

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           + H   G +  A +    MEK  I P+ +T+NTL+ G C  G++ EA ++  EM    + 
Sbjct: 734 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 793

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++VTYNTLI+GY   G+ +    +  EM+  G    +LTYNALI GLCK G+   A  +
Sbjct: 794 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 853

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           VK++ +N + P+ STY +LI G  +    ERA  
Sbjct: 854 VKEMVENGITPDDSTYISLIEG--LTTEDERAID 885



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNASTYSALITGQCVR 451
           E+LR   + + +TYN +I G C  G+ + A  +++++ ++  + PN  TY  +I+G C  
Sbjct: 504 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 563

Query: 452 KNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              + A +++  M+  G  +P   ++  L+  +C     D A      M+E+ +A     
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L   L   G+   A +L  +M  +GL P  F
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 177/350 (50%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K          QM  +G  P I + +  ++S     RV  A    
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++      G I  A+ +F  M   GF P V TY TLI+G C  
Sbjct: 120 AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    M +   QPNV  +NT+I   CK  ++ EA  +FSEM    +SP++ TY
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+    +   +  A+L  EM+ + I  D++++N ++  LCKEGK  +A  +V  + +
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY+AL+ G C+    + A +++ +M+  GC PN   +  L++ +C+ +  D+
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM  + + PD++  S L  GL H  + + A+ LF +M     +P
Sbjct: 360 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIP 409



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 157/318 (49%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  + SL    +V  A   + EM    ISP+++T N ++HA C L   +    +
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M     +P V ++NT++   C +G ++ A    + M + G++PNV+T+  L+ G C 
Sbjct: 259 LNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCL 318

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++ EA ++F  M      PNV++YNTLINGY ++   +    L+ EM R  +  D +T
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI GLC   + + A  L  ++   S +PN  TY  L+   C  +    A  L K++ 
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S   P+  +  + +   C+  + + A ++   +  K + PD    S + +GL   G  +
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A KLFR+M+  G    G
Sbjct: 499 EASKLFREMDENGCTLNG 516



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 171/380 (45%), Gaps = 35/380 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   ++ +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I P+V + N V+ A CK G +  A +V   M   G  P+V TY  L+ GH
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +  A+K  + M   G  PNVI++NTLI G+CK  ++ +A  +F EM    + P+ 
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 376

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLR-------------------------------- 396
           VTY+TLI+G   V   +   +L+ EM+                                 
Sbjct: 377 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 436

Query: 397 ---NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
              + +  DI   N  I G+C+ G+ + A  L  +L    L P+  TYS +I G C R  
Sbjct: 437 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A +L++ M  +GC  N  I+  +   F +N +  RA ++L EM+ +  + D+  ++ 
Sbjct: 497 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 556

Query: 514 LYSGLHHCGKDELAMKLFRK 533
               L   G D+   ++ R+
Sbjct: 557 FVKMLSDDGLDQSLKQILRE 576



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 177/428 (41%), Gaps = 50/428 (11%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           +LT   K K   ++L      DSF +P  ++                  +L  ++ H  +
Sbjct: 67  LLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY---------------TLHILINSFCHLNR 111

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A     ++   G  P   +    +  +    ++  AL  + +M      P+V T   
Sbjct: 112 VGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGT 171

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  CK+G    A+ +  +M      P+V  YNT+I   C    ++ A    + M   G
Sbjct: 172 LINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 231

Query: 329 IQPNVITFNTLIF-----------------------------------GFCKKGKLHEAN 353
           I P++ T+N+LI                                      CK+GK+ EA+
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  +M    V PNVVTY  L++G+  +   +    +++ M+  G   ++++YN LI G 
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGY 351

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK  +  KA YL  ++ +  L+P+  TYS LI G C  +  + A  L+  M+     PN 
Sbjct: 352 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 411

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             + +L+   C+N     A  +L  +    + PD  + +    G+   G+ E A  LF  
Sbjct: 412 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 471

Query: 534 MEIRGLLP 541
           +  +GL P
Sbjct: 472 LSSKGLQP 479



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 150/351 (42%), Gaps = 21/351 (5%)

Query: 86  YSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTL 140
           Y+ LIH+     +WK +  L   +       V  K+  D V    F T V          
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEM-------VDSKIMPDVV---SFNTVVDALCKEGKVT 288

Query: 141 ETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           E H +V  ++ +  +    +  +++ G       D   K+FD+++   + C  + + ++ 
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC--KGCMPNVISYNT 346

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y   ++   A   F +M     +P   + +  +  L   ER+  A+  + EM    
Sbjct: 347 LINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACS 406

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN+ T  +++   CK   +  A+ + K +E     P +   N  I G C  G L  A 
Sbjct: 407 QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAAR 466

Query: 319 K-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             F NL  K G+QP+V T++ +I G C++G L EA+++F EM     + N   YNT+  G
Sbjct: 467 DLFSNLSSK-GLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRG 525

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + +   +     L +EM+  G   D  T    +  L  +G  +    ++++
Sbjct: 526 FLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRE 576



 Score = 39.3 bits (90), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 34/156 (21%), Positives = 57/156 (36%)

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           S +  MLR       + +N L+  + K         L   +D   + PN  T   LI   
Sbjct: 47  SSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSF 106

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C       AF +   +++ G +P+   F  L+           A  +  +M+ +   PD 
Sbjct: 107 CHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDV 166

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +    L +GL   G    A++L   M  +   P  F
Sbjct: 167 VTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVF 202


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 212/428 (49%), Gaps = 21/428 (4%)

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD------SDSFDLPSKL 178
           +F  WV+ H  S  ++    I++H            ++LR I+        D+F+L S  
Sbjct: 178 KFGNWVECHGFSH-SISCFRIIVHAFALAGMRLEVWALLRDIVGFCNEAKYDTFELFSAF 236

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
            DS  +  R    S +VFD+L   +A      NA D F   +  G  P I +CN  L  L
Sbjct: 237 LDSPQHVER----SGVVFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCL 292

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-----LGIIERAVEVFKNMESMG 293
           +++ RV+     ++E++    SPN+YT  ++M+ +C       G+ + AV + K   S G
Sbjct: 293 VEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRS-G 351

Query: 294 FIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQP-NVITFNTLIFGFCKKGKLHE 351
             P+V TY+T I G C  G +  A M  +NL   N  QP N  +FN +I+GFCK+G++ E
Sbjct: 352 EKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTN--QPLNSHSFNDVIYGFCKRGEVFE 409

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++  EMK++ + P+V +Y+ LIN +   G+      L EEM  + IK  I++Y +LI 
Sbjct: 410 ALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIH 469

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK+   + A  +   +  +S   +++ Y  LI G C++ + + A +L + MI +   P
Sbjct: 470 GLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVP 529

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
                  L+  + +   FD+A EV   ML   + PD+I  + +  G    G  + A+ L 
Sbjct: 530 TAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLL 589

Query: 532 RKMEIRGL 539
              +  G 
Sbjct: 590 EDFQEHGF 597



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 149/298 (50%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A+   +EM  N + P  ++   ++  + KLG+ ++A+EVF  M   G  P     N 
Sbjct: 512 MDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNY 571

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++ G C  G    A+      +++G   N  ++N +I+  CK+G    A  +   M   N
Sbjct: 572 ILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRN 631

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V P+VV Y+TLI+G+ +  N +   +L+  M++ GI  +I TY  L+       K  +A 
Sbjct: 632 VLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAY 691

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + K++ +  L  +  +Y+ LI G C  +  ++A+ L++ M R GC PN   +  ++  F
Sbjct: 692 GIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGF 751

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C++   D A  V  +M    + PD +  + L    H  G  + A KL+  M+ +G+LP
Sbjct: 752 CKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLP 809



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 190/405 (46%), Gaps = 22/405 (5%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ T+S  +H L K    +++  ++R +  ++   L S  F+ ++Y +            
Sbjct: 355 TVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQ-PLNSHSFNDVIYGF------------ 401

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
                  R +   A     +M+  G LP + S +  +++      V   L   +EM  ++
Sbjct: 402 -----CKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQ 456

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I P++ +   ++H  CK  +++ AV++F ++ +       T Y TLI G C +G +  A+
Sbjct: 457 IKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAI 516

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K    M  N + P   +  +LI G+ K G   +A  +F+ M    + P+ +  N +++G 
Sbjct: 517 KLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGS 576

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +   +L E+   +G  ++  +YNA+I  LCKEG  ++A  L+  + K +++P+ 
Sbjct: 577 CRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSV 636

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             YS LI+G   + N +RA  L+  M++ G   N   + +LMS F  +     A  +  E
Sbjct: 637 VNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKE 696

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           M E+ +  D I  + L  G   C   E+  A  LF +M   G  P
Sbjct: 697 MKERGLCLDQISYTTLIVGF--CNNREMKKAWALFEEMSREGCSP 739



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 166/365 (45%), Gaps = 35/365 (9%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A     ++   G  P + + + ++  L     V+ AL   + +       N ++ N V
Sbjct: 338 RQAAVILGKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDV 397

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ FCK G +  A++V + M+S G +P V +Y+ LI+  C KG +   +     ME + I
Sbjct: 398 IYGFCKRGEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQI 457

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+++++ +LI G CKK  L  A  IF  + A++   +   Y TLI+G+   G+ +    
Sbjct: 458 KPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIK 517

Query: 390 LYEE-----------------------------------MLRNGIKVDILTYNALILGLC 414
           L EE                                   MLR+GI  D +  N ++ G C
Sbjct: 518 LLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSC 577

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + G  K+A  L++D  ++    N  +Y+A+I   C     ERA +L   M++    P+  
Sbjct: 578 RAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVV 637

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+S F +  +F RA  +   M++  +  +    + L S   H  K   A  +F++M
Sbjct: 638 NYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEM 697

Query: 535 EIRGL 539
           + RGL
Sbjct: 698 KERGL 702



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 159/352 (45%), Gaps = 2/352 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  S++ G+   +       +F SI  S   C     V++ L   +  +    +A     
Sbjct: 463 SYTSLIHGLCKKNMLQNAVDIFHSIGAS--SCKYDSTVYETLIDGFCMQGDMDSAIKLLE 520

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M     +P   SC   +         D AL  +  M R+ I P+    N ++   C+ G
Sbjct: 521 EMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAG 580

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A+ + ++ +  GF  +  +YN +I   C +G    A++    M K  + P+V+ ++
Sbjct: 581 YFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYS 640

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI GF K+     A  +F+ M    ++ N+ TY  L++ +           +++EM   
Sbjct: 641 TLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKER 700

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+ +D ++Y  LI+G C   + KKA  L +++ +    PN  TY+ +I G C     + A
Sbjct: 701 GLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLA 760

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             ++  M R    P+   + +L+  + ++  FD+A ++   M +K + PD I
Sbjct: 761 TWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDI 812



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/316 (23%), Positives = 139/316 (43%), Gaps = 39/316 (12%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             ++++  F    ++E A++VF N + +G  P + T N L+        +    +    +
Sbjct: 249 VFDVLISVFASNSMLENALDVFSNAKHVGLEPDIRTCNFLLKCLVEANRVEFVRRVFEEL 308

Query: 325 EKNGIQPNVITFNTLIFGFCKK----GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           +  G  PN+ T+  ++  +C        + +A  I  ++  +   P VVTY+T I+G  +
Sbjct: 309 KDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVILGKIYRSGEKPTVVTYSTYIHGLCK 368

Query: 381 VGNSEMGASL-----------------------------------YEEMLRNGIKVDILT 405
           VGN E    L                                    EEM  +GI  D+ +
Sbjct: 369 VGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKRGEVFEALQVLEEMKSSGILPDVYS 428

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI   C +G   K   L+++++ + + P+  +Y++LI G C +   + A  ++ S+ 
Sbjct: 429 YSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIG 488

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S C+ +  ++E L+  FC   D D A ++L EM+   + P +     L  G +  G  +
Sbjct: 489 ASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFD 548

Query: 526 LAMKLFRKMEIRGLLP 541
            A+++F  M   G+ P
Sbjct: 549 QALEVFNAMLRDGIWP 564



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 41/322 (12%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL--LFKTYAHRKKFRNATDTFC 217
           E+++ G       D   KL + ++ +    +  P  F    L + Y     F  A + F 
Sbjct: 500 ETLIDGFCMQGDMDSAIKLLEEMICN----ELVPTAFSCRSLIRGYYKLGLFDQALEVFN 555

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P   +CN  L     +     AL   ++ + +  + N ++ N +++  CK G
Sbjct: 556 AMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEG 615

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV---- 333
             ERA+E+   M     +PSV  Y+TLISG   +     A+     M K GI  N+    
Sbjct: 616 YPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYT 675

Query: 334 -------------------------------ITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                          I++ TLI GFC   ++ +A  +F EM   
Sbjct: 676 ILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSRE 735

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SPNV+TY  +I+G+ +    ++   ++++M R+ +  D++TY  LI    K G   +A
Sbjct: 736 GCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQA 795

Query: 423 AYLVKDLDKNSLVPNASTYSAL 444
             L   +    ++P+  T++ L
Sbjct: 796 HKLYDVMKDKGVLPDDITHNVL 817



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 2/195 (1%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP + + +  +S          A+  +  M +  I+ N+ T  ++M  F     +  A  
Sbjct: 633 LPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYG 692

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +FK M+  G      +Y TLI G CN   +  A      M + G  PNVIT+  +I GFC
Sbjct: 693 IFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFC 752

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K  ++  A  +F +M   +V P+VVTY  LI+ Y + G  +    LY+ M   G+  D +
Sbjct: 753 KSNRIDLATWVFDKMNRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDI 812

Query: 405 TYNALIL--GLCKEG 417
           T+N L L  G  +EG
Sbjct: 813 THNVLGLKAGTVQEG 827


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 182/380 (47%), Gaps = 20/380 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +     +  +A + F +M++ G  P + + N  +     S R   A    +E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +ISP+V T N +++AF K G    A E++  M   G IP+  TYN++I G C +  
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM   G  P+V TF TLI G+C   ++ +   +  EM    +  N VTYNT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK------ 427
           LI+G+  VG+      L ++M+ +G+  DI+T N L+ GLC  GK K A  + K      
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 428 -DLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            DLD     N + P+  TY+ LI G         A +LY+ M   G  P+   +  ++  
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    D A ++ + M  K  +P+ +  + L +G    G+ +  ++LF +M  RG++  
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615

Query: 543 ---------GFDKLRTINCA 553
                    GF K+  IN A
Sbjct: 616 AIIYITLIYGFRKVGNINGA 635



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 174/376 (46%), Gaps = 36/376 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   G  P + +    L  L   +RV  AL F+ +M 
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
                PNV T   +M+  C+ G I  AV +   M   G  P+  TY T++ G C KG   
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236

Query: 313 -LLSLAMKFKNL--------------------------------MEKNGIQPNVITFNTL 339
             L+L  K + +                                M++ GI P++ T+N++
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  G+  +A ++  EM    +SP+VVTYN LIN + + G     A LY+EML  GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             + +TYN++I G CK+ +   A  +   +      P+  T++ LI G C  K  +   +
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGME 416

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M R G   N   +  L+  FC   D + A ++  +M+   + PD +  + L  GL 
Sbjct: 417 LLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 476

Query: 520 HCGKDELAMKLFRKME 535
             GK + A+++F+ M+
Sbjct: 477 DNGKLKDALEMFKAMQ 492



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 13/387 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   S  +    +L   +L   R      + ++ L   +    KF  A + + +M 
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEMLE--RKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +      +R+D A   +  M     SP+V+T   ++  +C    I+
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M   G + +  TYNTLI G C  G L+ A+     M  +G+ P+++T NTL+
Sbjct: 413 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 472

Query: 341 FGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G C  GKL +A  +F  M+ +            V P+V+TYN LI G    G       
Sbjct: 473 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 532

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LYEEM   GI  D +TY+++I GLCK+ +  +A  +   +   S  PN  T++ LI G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                +   +L+  M R G   +  I+  L+  F +  + + A ++  EM+   + PD+I
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEI 536
            +  + +G     + E A+ +   +++
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDLQM 679



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 174/341 (51%), Gaps = 5/341 (1%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K +  ++  ER D+ +  Y++M R +I  ++Y+ 
Sbjct: 58  KGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF 117

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++  FC    +  A+  F  +  +G  P V T+ TL+ G C +  +S A+ F + M +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + P  +TY T+++G  + G++  
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + I  +++ Y+A+I  LCK+G+   A  L  ++ +  + P+  TY+++I
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A QL + M+     P+   +  L++ F +   F  AAE+  EML + + 
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357

Query: 506 PDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
           P++I  + +  G   C +D L  A  +F  M  +G  P  F
Sbjct: 358 PNTITYNSMIDGF--CKQDRLDAAEDMFYLMATKGCSPDVF 396



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 170/385 (44%), Gaps = 18/385 (4%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S++ D   ++F++       C  + + F  L        +   A     +M + G  P  
Sbjct: 166 SEALDFFHQMFETT------CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQ 219

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
            +    +  +        AL   ++M   + I PNV   + ++ + CK G    A  +F 
Sbjct: 220 ITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFT 279

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M+  G  P + TYN++I G C+ G  S A +    M +  I P+V+T+N LI  F K+G
Sbjct: 280 EMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEG 339

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  EA  ++ EM    + PN +TYN++I+G+ +    +    ++  M   G   D+ T+ 
Sbjct: 340 KFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFT 399

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G C   +      L+ ++ +  LV N  TY+ LI G C+  +   A  L + MI S
Sbjct: 400 TLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISS 459

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM-----------APDSIILSELYS 516
           G  P+      L+   C N     A E+   M +  M            PD +  + L  
Sbjct: 460 GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILIC 519

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL + GK   A +L+ +M  RG++P
Sbjct: 520 GLINEGKFLEAEELYEEMPHRGIVP 544



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 175/355 (49%), Gaps = 8/355 (2%)

Query: 189 CDSSPL-VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C SSP      LF T + R     A+   C+    G     ES  K  S   + + ++ A
Sbjct: 10  CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGG-----ESL-KLQSGFHEIKGLEDA 63

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  + +M R+R  P+V     +M    ++   +  + +++ ME       + ++N LI  
Sbjct: 64  IDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKC 123

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C+   L  A+     + K G+ P+V+TF TL+ G C + ++ EA   F +M  T   PN
Sbjct: 124 FCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPN 183

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVT+ TL+NG  + G      +L + M+ +G++   +TY  ++ G+CK+G T  A  L++
Sbjct: 184 VVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLR 243

Query: 428 DLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +++ S ++PN   YSA+I   C       A  L+  M   G  P+   +  ++  FC +
Sbjct: 244 KMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSS 303

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  A ++L EMLE+ ++PD +  + L +     GK   A +L+ +M  RG++P
Sbjct: 304 GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 358


>gi|449502417|ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 208/439 (47%), Gaps = 29/439 (6%)

Query: 92  SDWKKLTALSTH-LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
           S W+ L +L  +   P     +LL+++ +  L+L FF W Q     +  L ++S ++HIL
Sbjct: 57  SRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHIL 116

Query: 151 TKNRKFKSSESILRGIL------DSDSFD--------LPSKLFDSILYSYRMCDSSPLVF 196
            + R    ++ +++  +      DSD++          P KLF++++ +Y+ C S+P VF
Sbjct: 117 ARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVF 176

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-- 254
           DLL K     KK  ++ +    +R  G  P + + N  +  +   +  ++A   ++E+  
Sbjct: 177 DLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFG 236

Query: 255 -----------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
                       + R+SPNV+T N +M  F + G + R  E++  +      P+  +Y+ 
Sbjct: 237 LDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFVGRVKEIWDQLADSNSTPNSYSYSI 296

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++  C +     A +    M+   ++P+V+ +NT+I GFCK G  H A   + EM+ + 
Sbjct: 297 LMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSG 356

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +     T   LINGY   G+ +    +Y++M R    ++  T   LI  LC E +  +A 
Sbjct: 357 IESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEAL 416

Query: 424 YLVK-DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            +    ++ +S  P   T+  LI   C     E AF+L   M+  G +PN  I++  +  
Sbjct: 417 DVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDA 476

Query: 483 FCQNEDFDRAAEVLLEMLE 501
           + +  + +   ++  EM E
Sbjct: 477 YTKEGNAEMVEKLWKEMHE 495



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 109/240 (45%), Gaps = 18/240 (7%)

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           L + E  V+ +K   S  F+     ++ LI    +   L  +++   ++   GI P V T
Sbjct: 156 LKLFETLVKTYKRCGSAPFV-----FDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVST 210

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATN-------------VSPNVVTYNTLINGYGQVG 382
            N+LI    K    + A  IF E+   +             VSPNV T+NTL++ + + G
Sbjct: 211 LNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDG 270

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                  +++++  +    +  +Y+ L+  LC+E +T +A  L +++    L P+   Y+
Sbjct: 271 FVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +I G C   ++ RA + Y+ M  SG        E L++ +C   D D A  V  +M  K
Sbjct: 331 TIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRK 390



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 1/155 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + + +M   G      +    ++   D+  VD AL  YK+MRR + S N  TL  ++ 
Sbjct: 345 AEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIR 404

Query: 272 AFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             C    +  A++VF   +E   F P++ T+  LI+  C +G +  A K +  M   G +
Sbjct: 405 MLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFK 464

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           PN+  + + I  + K+G      +++ EM    +S
Sbjct: 465 PNLKIYQSFIDAYTKEGNAEMVEKLWKEMHEIQLS 499



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 87/207 (42%), Gaps = 26/207 (12%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ LI       KL  +  I   +++  +SP V T N+LI    +   + +  +++ E+
Sbjct: 175 VFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G+  +I   +  +                    K  + PN  T++ L+   C  ++ 
Sbjct: 235 F--GLDCEIEEEHVKL--------------------KGRVSPNVHTFNTLM--DCFYRDG 270

Query: 455 --ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
              R  +++  +  S   PN + + +LM+  C+ +    A E+  EM  K + PD +  +
Sbjct: 271 FVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  G    G    A + +R+ME+ G+
Sbjct: 331 TIIGGFCKAGHTHRAEEFYREMELSGI 357


>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
          Length = 486

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 192/402 (47%), Gaps = 21/402 (5%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           S  LTP RV H L+  Q D +L++E F           +  T+  ++  L + R+FK+ E
Sbjct: 95  SRMLTPARV-HKLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTME 153

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +++ +                      C  +P +F  + + Y        A   F QM 
Sbjct: 154 GLIQQMRKDG------------------CPYTPGLFVDIIEIYGEVGMPNEAIKAFHQML 195

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++G+ P+ +  N  L  L++ + ++ AL  +K++    ISPN  T N+++ A C    + 
Sbjct: 196 EFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLS 255

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F  M   G IP V TY+ L+ G C K  +  A+   + M   G  P+ +T+NTL+
Sbjct: 256 HAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLL 315

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C+K  L EA R+ S+MK    +P+V+ YNT+I G+ + G +     +  +M  NG  
Sbjct: 316 NSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRDMPENGCL 375

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + L+Y  L+ GLC EGK  +A   V+++  N  +P+ S Y  LITG C       A ++
Sbjct: 376 PNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEV 435

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
              M +    P++  + +L+   C  ED    A  L++ L +
Sbjct: 436 LVMMTKQTLAPHESTWSVLLMRIC--EDSQTEARELVDKLSE 475



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 149/328 (45%), Gaps = 12/328 (3%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI--SPNVYTLNMVMHAFCKLG 277
           R  GF     + +  +  L  + +     G  ++MR++    +P ++    ++  + ++G
Sbjct: 125 RQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFV--DIIEIYGEVG 182

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTL----ISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           +   A++ F  M   G+ P    +N L    I   C +  LSL   FK L E  GI PN 
Sbjct: 183 MPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSL---FKKLHE-FGISPNT 238

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T+N LI   C   KL  A  +F++M      P+V TY+ L+ G  +    +    + +E
Sbjct: 239 RTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDE 298

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ML  G   D LTYN L+  LC++   ++A  L+  +      P+   Y+ +ITG C    
Sbjct: 299 MLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGR 358

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           +  A Q+ + M  +GC PN   +  L++  C    FD A + + EM+     P   I   
Sbjct: 359 ALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHL 418

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L +GL + GK   A ++   M  + L P
Sbjct: 419 LITGLCNEGKVGEACEVLVMMTKQTLAP 446



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 13/277 (4%)

Query: 282 AVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNL------MEKNGIQPNVI 334
           A+E+F+      GF  S +TY+TLI        L  A +FK +      M K+G      
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLICK------LGRARQFKTMEGLIQQMRKDGCPYTPG 169

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F  +I  + + G  +EA + F +M      P    +N L+    +    E   SL++++
Sbjct: 170 LFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKL 229

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              GI  +  TYN LI   C   K   A +L   + K   +P+  TYS L+ G C +   
Sbjct: 230 HEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQV 289

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A  +   M+  G  P+   +  L+++ C+  +   A  +L +M      PD I  + +
Sbjct: 290 KTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTV 349

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +G    G+   A ++ R M   G LP        +N
Sbjct: 350 ITGFCREGRALDACQILRDMPENGCLPNALSYRTLVN 386



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 109/261 (41%), Gaps = 21/261 (8%)

Query: 316 LAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           LAM+ F+    + G + +  T++TLI    +  +      +  +M+          +  +
Sbjct: 115 LAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDI 174

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I  YG+VG        + +ML  G +     +N L++ L +    + A  L K L +  +
Sbjct: 175 IEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGI 234

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY+ LI   C       A+ L+  M + GC P+   + +LM   C+      A  
Sbjct: 235 SPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALG 294

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP----------- 541
           VL EML K   PD++  + L + L  C K  L  A +L  KM++ G  P           
Sbjct: 295 VLDEMLNKGYVPDALTYNTLLNSL--CRKMNLREAYRLLSKMKVMGCNPDVINYNTVITG 352

Query: 542 -----KGFDKLRTINCAPENG 557
                +  D  + +   PENG
Sbjct: 353 FCREGRALDACQILRDMPENG 373


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 183/383 (47%), Gaps = 10/383 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L  +  S  F    K+ D +    + C  + + ++++        +  +A     ++  
Sbjct: 178 LLEAVCKSSGFGQAMKVLDEM--RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSS 235

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YGF P   S    L  L  ++R +     + EM  N   PN  T +M++  FC+ G++ER
Sbjct: 236 YGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVER 295

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+EV   M   G   + T  N +I+  C +G +  A +F N M   G  P+ I++ T++ 
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLK 355

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+ G+  +A  + +EM   N  PN VT+NT I    Q G  +    L E+M   G  V
Sbjct: 356 GLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSV 415

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            I+TYNAL+ G C +G+   A  L   L      PN  TY+ L+TG C  +  + A +L 
Sbjct: 416 GIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELL 472

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+++ C  N   F +L+S FCQ    + A E++ +M+E    P+ I  + L  G+   
Sbjct: 473 AEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITED 532

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
              E A++L     + GL+ KG 
Sbjct: 533 CNSEEALEL-----LHGLVSKGI 550



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 170/380 (44%), Gaps = 5/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+ D         L D +L   R C  S + + +L +       F  A     +MR 
Sbjct: 143 LIRGLCDRGRVGDALSLLDDMLR--RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRA 200

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + N  ++ +   +RVD A      +      P+  +   V+   C     E 
Sbjct: 201 KGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWED 260

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
              +F  M     +P+  T++ L+   C  G++  A++  + M ++G   N    N +I 
Sbjct: 261 VEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVIN 320

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             CK+G++ +A    + M +   SP+ ++Y T++ G  + G  E    L  EM+R     
Sbjct: 321 SICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPP 380

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +T+N  I  LC++G   +A  L++ + +        TY+AL+ G CV+   + A +L+
Sbjct: 381 NEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELF 440

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            S+    C PN   +  L++  C  E  D AAE+L EM++     + +  + L S     
Sbjct: 441 NSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQK 497

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  E A++L ++M   G  P
Sbjct: 498 GFVEEAIELVQQMMEHGCTP 517



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 146/313 (46%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P+I         L D  RV  AL    +M R    P+V T  +++ A CK     +
Sbjct: 138 YTYTPLIRG-------LCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQ 190

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A++V   M + G  P++ TYN +I+G C +  +  A +  N +   G QP+ +++ T++ 
Sbjct: 191 AMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLK 250

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F EM   N  PN VT++ L+  + + G  E    + + M  +G   
Sbjct: 251 GLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTA 310

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C     E A +L 
Sbjct: 311 NTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELL 370

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+R  C PN+  F   +   CQ    D+A  ++ +M E   +   +  + L +G    
Sbjct: 371 NEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQ 430

Query: 522 GKDELAMKLFRKM 534
           G+ + A++LF  +
Sbjct: 431 GRVDSALELFNSL 443



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 168/356 (47%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  +   + +  +A +    M  YG  P   S    L  L  + R + A 
Sbjct: 308 CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAK 367

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM R    PN  T N  +   C+ G+I++A+ + + M   G    + TYN L++G 
Sbjct: 368 ELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGF 427

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++  N +     +PN IT+ TL+ G C   +L  A  + +EM   +   NV
Sbjct: 428 CVQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNV 484

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L++ + Q G  E    L ++M+ +G   +++T+N L+ G+ ++  +++A  L+  
Sbjct: 485 VTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHG 544

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    +  +  TYS+++         E A Q++ ++   G RP   ++  ++S  C+  +
Sbjct: 545 LVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCE 604

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            DRA +    M+     P+      L  GL   G  + A  +  ++  RG+L K  
Sbjct: 605 TDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSL 660



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 157/322 (48%), Gaps = 3/322 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  + K      ++ +A +   +M      P   + N F+  L     +D A+
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M     S  + T N +++ FC  G ++ A+E+F    S+   P+  TY TL++G 
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFN---SLPCEPNTITYTTLLTGL 459

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+   L  A +    M +N    NV+TFN L+  FC+KG + EA  +  +M     +PN+
Sbjct: 460 CHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL 519

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T+NTL++G  +  NSE    L   ++  GI +D +TY++++  L +E + ++A  +   
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHA 579

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P A  Y+ +++  C R  ++RA   +  M+ + C PN+  + +L+    +   
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639

Query: 489 FDRAAEVLLEMLEKCMAPDSII 510
              A  VL E+  + +   S+I
Sbjct: 640 LKEARYVLSELCSRGVLSKSLI 661



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 146/312 (46%), Gaps = 3/312 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +  C K + +L    R   A    +    +    +V+  N ++  +C+ G ++ A
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +   + SM   P   TY  LI G C++G +  A+   + M +   QP+V+T+  L+  
Sbjct: 125 RRL---IASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEA 181

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK     +A ++  EM+A   +PN+VTYN +ING  +    +    +   +   G + D
Sbjct: 182 VCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPD 241

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            ++Y  ++ GLC   + +    L  ++ +N+ VPN  T+  L+   C     ERA ++  
Sbjct: 242 TVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLD 301

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   GC  N  +  +++++ C+    D A E L  M     +PD+I  + +  GL   G
Sbjct: 302 RMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG 361

Query: 523 KDELAMKLFRKM 534
           + E A +L  +M
Sbjct: 362 RWEDAKELLNEM 373



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 132/282 (46%), Gaps = 3/282 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+VY    ++   C+ G    A  V +  E  G    V  YNTL++G+C  G L  A  
Sbjct: 67  APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA-- 124

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
            + L+    + P+  T+  LI G C +G++ +A  +  +M      P+VVTY  L+    
Sbjct: 125 -RRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVC 183

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +         + +EM   G   +I+TYN +I G+C+E +   A  ++  L      P+  
Sbjct: 184 KSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTV 243

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ ++ G C  K  E    L+  M+ + C PN+  F+ML+  FC+    +RA EVL  M
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRM 303

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E     ++ + + + + +   G+ + A +    M   G  P
Sbjct: 304 SEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 129/276 (46%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+ YT   ++   C  G +  A+ +  +M      PSV TY  L+   C       AM
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M   G  PN++T+N +I G C++ ++ +A +I + + +    P+ V+Y T++ G 
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 E    L+ EM+ N    + +T++ L+   C+ G  ++A  ++  + ++    N 
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +  + +I   C +   + AF+   +M   GC P+   +  ++   C+   ++ A E+L E
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           M+ K   P+ +  +     L   G  + A+ L  +M
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQM 408



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/239 (18%), Positives = 102/239 (42%), Gaps = 5/239 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   +LF+S+      C+ + + +  L     H ++   A +   +M 
Sbjct: 422 ALVNGFCVQGRVDSALELFNSL-----PCEPNTITYTTLLTGLCHAERLDAAAELLAEMM 476

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                  + + N  +S       V+ A+   ++M  +  +PN+ T N ++    +    E
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E+   + S G      TY++++     +  +  A++  + ++  G++P  + +N ++
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKIL 596

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
              CK+ +   A   F+ M + +  PN  TY  LI G  + G  +    +  E+   G+
Sbjct: 597 SALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 157/296 (53%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + FC+M   G +P   + +  ++              Y+ M+R+ I PN Y  N ++ 
Sbjct: 212 AKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLIS 271

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +C  G++++A +VF  M   G    V TYN LI G C       A+K  + + K G+ P
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N++T+N LI GFC   K+  A R+F+++K++ +SP +VTYNTLI GY +V N      L 
Sbjct: 332 NIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM    I    +TY  LI    +   T+KA  +   ++K+ LVP+  TYS L+ G CV 
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVH 451

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            N + A +L+KS+     +PN  I+  ++  +C+     RA  +L EM++  M P+
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPN 507



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 190/404 (47%), Gaps = 9/404 (2%)

Query: 142 THSIVL---HILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS-YRMCDSSPLVFD 197
           +HSI     H+L+     ++   ILR I    S  +PS L   +  + +  C +   ++D
Sbjct: 38  SHSISFILNHLLSSGMLPQAQSLILRLI----SGRIPSSLMLQLTQAHFTPCSTYTPLYD 93

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            +   Y H      A      M   G +P+  + N  L  L+ S   D A   + E++ +
Sbjct: 94  TVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELK-S 152

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           ++  + Y+  +++   C+ G   +   +   +E  G  P+V  Y TLI G C  G + LA
Sbjct: 153 KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLA 212

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 M + G+ PN  T++ L+ GF K+G   E  +++  MK + + PN   YN LI+ 
Sbjct: 213 KNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y   G  +    ++ EM   GI   ++TYN LI GLC+  K  +A  LV  ++K  L PN
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ LI G C  +  + A +L+  +  SG  P    +  L++ + + E+   A +++ 
Sbjct: 333 IVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EM E+C+AP  +  + L          E A ++   ME  GL+P
Sbjct: 393 EMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVP 436



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 188/376 (50%), Gaps = 3/376 (0%)

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           ++ S+ FD    +F+  L S  + D+    F ++ K       F         + ++G  
Sbjct: 134 LIRSNYFDKAWWIFNE-LKSKVVLDAYS--FGIMIKGCCEAGYFVKGFRLLAMLEEFGLS 190

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +      +        V +A   + +M R  + PN +T +++M+ F K G+     ++
Sbjct: 191 PNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQM 250

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           ++NM+  G +P+   YN LIS +CN G++  A K    M + GI   V+T+N LI G C+
Sbjct: 251 YENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCR 310

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             K  EA ++  ++    +SPN+VTYN LING+  V   +    L+ ++  +G+   ++T
Sbjct: 311 GKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVT 370

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI G  K      A  LVK++++  + P+  TY+ LI       ++E+A +++  M 
Sbjct: 371 YNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLME 430

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           +SG  P+ + + +L+   C + +   A+++   + E  + P+S+I + +  G    G   
Sbjct: 431 KSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSY 490

Query: 526 LAMKLFRKMEIRGLLP 541
            A++L  +M   G++P
Sbjct: 491 RALRLLNEMVQSGMVP 506



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 168/333 (50%), Gaps = 4/333 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +P  + +L   +  +   R     +  M+  G +P   + N  +S   +   VD A   +
Sbjct: 227 NPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVF 286

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EMR   I+  V T N+++   C+      AV++   +  +G  P++ TYN LI+G C+ 
Sbjct: 287 AEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDV 346

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  A++  N ++ +G+ P ++T+NTLI G+ K   L  A  +  EM+   ++P+ VTY
Sbjct: 347 RKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTY 406

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+ + ++ ++E    ++  M ++G+  D+ TY+ L+ GLC  G  K+A+ L K L +
Sbjct: 407 TILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGE 466

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L PN+  Y+ +I G C   +S RA +L   M++SG  PN   F   +   C++E +  
Sbjct: 467 MHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKE 526

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           A  +L +M+   + P       LY  +H    D
Sbjct: 527 AELLLGQMINSGLKPS----VSLYKMVHKVKGD 555



 Score = 82.8 bits (203), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 100/212 (47%), Gaps = 6/212 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++ G  D    D   +LF+ +    +    SP  + ++ L   Y+  +    A D   +M
Sbjct: 339 LINGFCDVRKMDSAVRLFNQL----KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            +    P   +    + +       + A   +  M ++ + P+VYT ++++H  C  G +
Sbjct: 395 EERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNM 454

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A ++FK++  M   P+   YNT+I G+C +G    A++  N M ++G+ PNV +F + 
Sbjct: 455 KEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCST 514

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           I   C+  K  EA  +  +M  + + P+V  Y
Sbjct: 515 IGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 1/174 (0%)

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+T++N Y    +++   +    M+  G      T+N L+  L +     KA ++  +L 
Sbjct: 92  YDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNEL- 150

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K+ +V +A ++  +I G C      + F+L   +   G  PN  I+  L+   C++ +  
Sbjct: 151 KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVM 210

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            A  +  +M    + P+    S L +G    G      +++  M+  G++P  +
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/320 (34%), Positives = 171/320 (53%), Gaps = 5/320 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I   +K L+S+   +     L  YK+M    I  N YTLN+++++FC L  +  A  V
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
             ++  +G+ PS  T+ TLI G C +G +  A++  + M   G QP+V+T+ TLI G CK
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             +L EA  +FS+M A  +SPN  TY++LI+G   +G+ +    L+  M+   I  D LT
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 406 YNALILGLCKEGKTK---KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +N L+  LCKEG  +   KA  L +++ +  L+P+  TY+ LI G C       A  L+ 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC 521
            M+  G  P+   + +L    C+N     A  VLL+++E   + PD  I S +  G+   
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAM-VLLKVIEGTNLDPDIHIYSIVMDGMCRA 306

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ E A  LF K+  +GL P
Sbjct: 307 GELEAARDLFSKLSSKGLHP 326



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 160/345 (46%), Gaps = 7/345 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L  +    K +      + QM  +G      + N  ++S     R+  A     ++ 
Sbjct: 13  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+  T   ++   C  G I  A+++F  M   GF P V TY TLI+G C    L+
Sbjct: 73  KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLT 132

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + M   GI PN  T+++LI G C  G   EA R+F  M    + P+ +T+NTL+
Sbjct: 133 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 192

Query: 376 N-----GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +     G  Q+ +  MG  L+EEM + G+  D +TYN LI GLC  G+ + A  L  ++ 
Sbjct: 193 DALCKEGMIQIMDKAMG--LFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMV 250

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
               +P+  TY  L    C       A  L K +  +   P+ HI+ ++M   C+  + +
Sbjct: 251 VYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELE 310

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            A ++  ++  K + PD    + + +GL   G    A KLF +M+
Sbjct: 311 AARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 156/333 (46%), Gaps = 8/333 (2%)

Query: 177 KLFDSILYSYRMCDS-----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           K + ++L  Y+  DS     +    ++L  ++ H  +   A      +   G+ P   + 
Sbjct: 24  KHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATF 83

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
              +  L    ++  AL  + +M      P+V T   +++  CK   +  A+ +F +M +
Sbjct: 84  TTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLA 143

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH- 350
            G  P+  TY++LI G C  G    A++    M    I P+ +TFNTL+   CK+G +  
Sbjct: 144 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQI 203

Query: 351 --EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             +A  +F EM    + P+ VTYNTLI+G   VG      +L+ EM+  G   D++TY  
Sbjct: 204 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 263

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L   LCK  +  +A  L+K ++  +L P+   YS ++ G C     E A  L+  +   G
Sbjct: 264 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 323

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             P+   + ++++  CQ      A+++  EM E
Sbjct: 324 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 356



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 130/289 (44%), Gaps = 39/289 (13%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   F  L +      K   A   F +M   GF P + +    ++ L    ++  AL  +
Sbjct: 79  STATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLF 138

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLG---------------------------------- 277
            +M    ISPN +T + ++H  C LG                                  
Sbjct: 139 SDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKE 198

Query: 278 ----IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
               I+++A+ +F+ M   G IP   TYNTLI G C+ G L  A+   + M   G  P++
Sbjct: 199 GMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDL 258

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T+  L    CK  +L EA  +   ++ TN+ P++  Y+ +++G  + G  E    L+ +
Sbjct: 259 VTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK 318

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +   G+  D+ TY  +I GLC++G   +A+ L  ++D+N  + + ST+S
Sbjct: 319 LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEND-IESYSTFS 366


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 213/430 (49%), Gaps = 8/430 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRG--ILDSDSFDLPSKLFD 180
           SLEFF            + ++  ++HIL++ R +K     L    +L  +++ + S ++D
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNY-IASAVWD 173

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            ++  YR    SP VFD++ K YA +   + A   F  M   G +P + SCN  LS+L+ 
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQ 233

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           +     AL  Y++M    I P++++  ++++A+CK G ++ A    K ME     P+V T
Sbjct: 234 NGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVT 293

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN+LI G+ + G +  A K   LM + GI  N  T+  LI G+CK+G++ +A ++F  M 
Sbjct: 294 YNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMM 353

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
             N+  +   Y  LI+ Y   G  +    + + ML+ G+K++ +  N+LI G CK G   
Sbjct: 354 EKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVN 413

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           KAA ++  +   +L P++  Y+ L+ G C +++  +AF+L   M   G       +  L+
Sbjct: 414 KAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLL 473

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
                    + A  +   M ++ +AP+ +    L       G  + AM +++       L
Sbjct: 474 KNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDA-----L 528

Query: 541 PKGFDKLRTI 550
            KGF K  T+
Sbjct: 529 SKGFTKSITL 538



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 68/163 (41%), Gaps = 2/163 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y        A +    M+D+   P     N  L      E    A     EM    
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKG 461

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++  V T N ++     +G +E A+ ++  M   G  P+  TY TL+      G    AM
Sbjct: 462 VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521

Query: 319 K-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
             +K+ + K G   ++  +NT+I GFCK  KL +A  IF +MK
Sbjct: 522 MIWKDALSK-GFTKSITLYNTMICGFCKMEKLVQAQEIFLKMK 563


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 183/360 (50%), Gaps = 8/360 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +++  L KT+  + +F +A     +MR+ G  P     N  +  L  ++++D A 
Sbjct: 451 CRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEAR 510

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F  EM  N   P+ +T    +  + + G    A +  K M   G IP+      LI+ +
Sbjct: 511 SFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEY 570

Query: 309 CNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C KG ++     F++++E+ GI  +  T+  L+ G  K GK+++A  IF EM+   ++P+
Sbjct: 571 CKKGKVIEACSAFRSMVEQ-GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V +Y TLI+G+ ++GN +  +S+++EM++ G+  +++ YN L+ G C+ G+ +KA  L+ 
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++      PNA TY  +I G C   +   AFQL+  M   G  P+  ++  L+   C+  
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           D +RA  +  E  EK  A  S   + L + +   GK EL   +  +     L+   FDK 
Sbjct: 750 DVERAITI-FETNEKGCASSSAPFNALINWVFKFGKTELTTDMINR-----LMDGSFDKF 803



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 214/502 (42%), Gaps = 35/502 (6%)

Query: 89  LIHSDWKKL---TALSTHLTPFRVKHVLL-KVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           L   +W++    + LS  + P  V  VL  K   D    L FF  V + K +   L++ S
Sbjct: 42  LNQGNWRETLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFS 101

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLP-SKLFDSILYSYR----MCDSSPLVFDLL 199
            +   L      + + S++  +++      P ++++ SI+   R      D   L+F +L
Sbjct: 102 FLALDLCNFGSIEKAHSVVIRMIERK---WPVAEVWSSIVRCLREFVGKSDDRVLLFGIL 158

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGF--LPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
              Y  +     A   F   +D     +P +  CN  L +LL   R+D+    YK M   
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVER 218

Query: 258 RISPNVYTLNMVMHAFCKLGIIE---------------------RAVEVFKNMESMGFIP 296
            +  +V +  M++ A C+ G ++                      A+E+ K+M   G +P
Sbjct: 219 NVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVP 278

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           S  +YN LI G C +  L  A      M   G+  + + ++ LI G  K      AN + 
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM +   S + + Y+  I    + G  E   +L++ M+  G+      Y +LI G  +E
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
              +K   L+ ++ K ++V +  TY   + G C   + + A+ + K M  SGCRPN  I+
Sbjct: 399 KNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIY 458

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+ TF Q   F  A  VL EM E+ +APD+   + L  GL    K + A     +M  
Sbjct: 459 TTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVE 518

Query: 537 RGLLPKGFDKLRTINCAPENGE 558
            G  P  F     I+   E GE
Sbjct: 519 NGFKPDAFTYGAFISGYIEAGE 540



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 188/426 (44%), Gaps = 29/426 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMC--------DSSP 193
            +SI++  L K R   ++  ++  ++ S  F +     D ++Y Y +C        + + 
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMV-SHGFSI-----DPMMYDYFICVMSKEGAMEKAK 370

Query: 194 LVFD--LLFKTYAHRKKFRNATDTFCQMRD----YGFLPIIESCNKFLS---------SL 238
            +FD  + F      + + +  + F + ++    Y  L  I+  N  +S          +
Sbjct: 371 ALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGM 430

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             S  +D A    KEM  +   PNV     ++  F +      AV V K M   G  P  
Sbjct: 431 CSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT 490

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
             YN+LI G      +  A  F   M +NG +P+  T+   I G+ + G+   A++   E
Sbjct: 491 FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKE 550

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    V PN V    LIN Y + G      S +  M+  GI  D  TY  L+ GL K GK
Sbjct: 551 MLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGK 610

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A  +  ++    + P+  +Y  LI G     N ++A  ++  M+++G   N  I+ M
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNM 670

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+  FC++ + ++A E+L EM  K   P+++    +  G    G    A +LF +M+++G
Sbjct: 671 LLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKG 730

Query: 539 LLPKGF 544
           L+P  F
Sbjct: 731 LVPDSF 736



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 176/396 (44%), Gaps = 43/396 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  + K   A   F  M + G L   ++    ++ L+ + +V+ A   + EMR   
Sbjct: 566 LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKG 625

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+P+V++   ++  F KLG +++A  +F  M   G   +V  YN L+ G C  G +  A 
Sbjct: 626 IAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAK 685

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G  PN +T+ T+I G+CK G L EA ++F EMK   + P+   Y TL++G 
Sbjct: 686 ELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGC 745

Query: 379 GQVGNSEMGASLYE--------------------------EMLRNGI------------K 400
            ++ + E   +++E                          E+  + I            K
Sbjct: 746 CRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGK 805

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN +I  LCKEG  + A  L   + K +L+P   TY++L+ G          F +
Sbjct: 806 PNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSV 865

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS-----ELY 515
           +  +I +G  P+  ++ ++++ F +     +A  +L +M  K    D   LS      L 
Sbjct: 866 FDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALL 925

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           SG    G+ E+A K+   M     +P     +  IN
Sbjct: 926 SGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELIN 961



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 177/384 (46%), Gaps = 33/384 (8%)

Query: 141 ETHSIVLHILTKNRKFKSSESI---LRG------------ILDSDS----FDLPSKLFDS 181
           +T++++++ L KN K   +E I   +RG            ++D  S        S +FD 
Sbjct: 596 KTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDE 655

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++ +     S+ +++++L   +    +   A +   +M   GF P   +    +     S
Sbjct: 656 MVQA--GLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +  A   + EM+   + P+ +    ++   C+L  +ERA+ +F+  E  G   S   +
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK-GCASSSAPF 772

Query: 302 NTLISGHCNKGLLSLAMKFKNLM-----EKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           N LI+     G   L     N +     +K G +PN +T+N +I   CK+G L  A  +F
Sbjct: 773 NALINWVFKFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELF 831

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M+  N+ P V+TY +L+NGY ++G      S+++E++  GI+ D + Y+ +I    KE
Sbjct: 832 HHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKE 891

Query: 417 GKTKKAAYLVKDLDKNSLVPNA-----STYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G T KA  L+  +   + V +      ST  AL++G       E A ++ ++M+R    P
Sbjct: 892 GMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIP 951

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEV 495
           +      L++  C + +   AA+ 
Sbjct: 952 DSSTVIELINESCISSNQRMAADA 975



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 144/371 (38%), Gaps = 70/371 (18%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD AL   K M    + P+  + N+++   CK   +E A  +   M S+G       Y+ 
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 304 LISG-------HCNKGLLS------------------LAMKFKNLMEKN----------G 328
           LI G           GL+                     M  +  MEK           G
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN----- 383
           + P    + +LI GF ++  + +   +  E+K  N+  +  TY T + G    G+     
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 384 ---SEMGAS---------------------------LYEEMLRNGIKVDILTYNALILGL 413
               EMGAS                           + +EM   GI  D   YN+LI+GL
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            K  K  +A   + ++ +N   P+A TY A I+G         A +  K M+  G  PNK
Sbjct: 501 SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNK 560

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            +   L++ +C+      A      M+E+ +  D+   + L +GL   GK   A ++F +
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620

Query: 534 MEIRGLLPKGF 544
           M  +G+ P  F
Sbjct: 621 MRGKGIAPDVF 631


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 188/402 (46%), Gaps = 18/402 (4%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           H+  S ++ T+SI+L    K   ++ + ++L  +                    + C+  
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEM------------------RAKGCEPD 320

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            + +++L     +      A +    +  +G  P   +    L SL  SER         
Sbjct: 321 IVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLA 380

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM  N  +P+  T N ++ + C+ G+++RA+EV  +M   G +  + TY++++ G C+ G
Sbjct: 381 EMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVG 440

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A++  + ++  G +P+ I + T++ G C   +   A  + +EM  ++  P+ VT+N
Sbjct: 441 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFN 500

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T++    Q G  +    + E+M  NG   DI+TYN +I GLC E     A  L+ DL   
Sbjct: 501 TVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSC 560

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+  T++ L+ G C     E A QL  +M+RS C P++  F  ++++ CQ     +A
Sbjct: 561 GCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            E L  M E    P+S   S +   L   GK + A++L   M
Sbjct: 621 IETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 156/310 (50%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + +L    R+  AL  + +M     SP+V T ++++ A CK     +A+ +   M +
Sbjct: 255 NPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRA 314

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P + TYN LI+  CN+G +  A+   + +  +G +P+ +T+  ++   C   +  E
Sbjct: 315 KGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKE 374

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              + +EM + N +P+ VT+NT++    Q G  +    + + M  +G   DI+TY++++ 
Sbjct: 375 VEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILD 434

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+   A  L+  L      P+   Y+ ++ G C  +  ERA +L   M+ S C P
Sbjct: 435 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP 494

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           ++  F  ++++ CQ    DRA  V+ +M E   +PD +  + +  GL +    + AM+L 
Sbjct: 495 DEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELL 554

Query: 532 RKMEIRGLLP 541
             ++  G  P
Sbjct: 555 SDLQSCGCKP 564



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 164/339 (48%), Gaps = 4/339 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L+G+  ++ ++   +L   +L S   C    + F+ +  +   +     A     QM 
Sbjct: 466 TVLKGLCSTEQWERAEELMAEMLCSD--CPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +  L +   +D A+    +++     P++ T N ++   C +   E
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWE 583

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  NM      P   T+NT+I+  C KGLL+ A++   +M +NG  PN  T++ ++
Sbjct: 584 DAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               K GK   A  + S M  TN +P+++TYNT+I+   + G  E    L   M+ NG+ 
Sbjct: 644 DALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLC 701

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY +L  G+C+E  T +A  +++ +    L P+ + Y+ ++ G C  + ++ A   
Sbjct: 702 PDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDC 761

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +  M+ SGC P++  + +L+         D A  +L  +
Sbjct: 762 FAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 184/403 (45%), Gaps = 11/403 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +  H  V  I+T +       SIL G+ D    D   +L  S L SY  C    + +  +
Sbjct: 417 MSEHGCVADIVTYS-------SILDGLCDVGRVDDAVELL-SRLKSYG-CKPDTIAYTTV 467

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            K     +++  A +   +M      P   + N  ++SL     VD A+   ++M  N  
Sbjct: 468 LKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGC 527

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP++ T N ++   C    I+ A+E+  +++S G  P + T+NTL+ G C       A +
Sbjct: 528 SPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQ 587

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M ++   P+ +TFNT+I   C+KG L +A      M      PN  TY+ +++   
Sbjct: 588 LMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALL 647

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G ++    L   M  NG   D++TYN +I  L K GK ++A  L++ +  N L P+ +
Sbjct: 648 KAGKAQAALELLSGM-TNGTP-DLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTT 705

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY +L  G C    ++RA ++ + +  +G  P+   +  ++  FC++   D A +    M
Sbjct: 706 TYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHM 765

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +     PD      L   L + G  + A +L   +   G+L K
Sbjct: 766 VSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDK 808



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/396 (25%), Positives = 167/396 (42%), Gaps = 59/396 (14%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGF--LPIIESCNKFLSSLL------DSERVDIALGFY 251
            ++   R +   A   F  M   G    P +  CN  +  L       D+ERV  ALG  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALG-- 214

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
                   S  V T N +++ +C+ G IE A  +   M    F P   T+N LI   C +
Sbjct: 215 -------PSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVR 264

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A+   + M   G  P+V+T++ L+   CK+    +A  +  EM+A    P++VTY
Sbjct: 265 GRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTY 324

Query: 372 NTLING----------------------------YGQVGNSEMGA-------SLYEEMLR 396
           N LIN                             Y  V  S  G+        L  EM  
Sbjct: 325 NVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           N    D +T+N ++  LC++G   +A  +V  + ++  V +  TYS+++ G C     + 
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDD 444

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L   +   GC+P+   +  ++   C  E ++RA E++ EML     PD +  + + +
Sbjct: 445 AVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVA 504

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            L   G  + A+++  +M   G  P     + T NC
Sbjct: 505 SLCQKGLVDRAIRVVEQMSENGCSP----DIVTYNC 536


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 199/418 (47%), Gaps = 55/418 (13%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +K FD +L  + +  ++PL + +L   +        A   F  +   G LP +++C+ F+
Sbjct: 275 AKYFDEML-DHGLMPNNPL-YTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFI 332

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
             LL + RV  AL  + E++   + P+V+T + ++  FCK G +E+A E+   M   G  
Sbjct: 333 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIA 392

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P++  YN L+ G C  G +  A K  + M + G++P+ +T++T+I G+CK   + EA  +
Sbjct: 393 PNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSL 452

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F EM +  V P+   YN L++G  + G+ E   +L+ EML+ G     L++N LI G CK
Sbjct: 453 FHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCK 511

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA-----------------F 458
             K ++A+ L +++    ++P+  TY+ +I   C     E A                 F
Sbjct: 512 SCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVF 571

Query: 459 QLYKSMIRSGCRPNK-----------------------------------HIFEMLMSTF 483
            L++ M+  G +P++                                    I ++L++  
Sbjct: 572 ALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITAL 631

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+ ED   A+++L EM E  + P     S L    H  GK + A ++F  ++  GL+P
Sbjct: 632 CKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVP 689



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 195/407 (47%), Gaps = 3/407 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+       L +KL + + +S      + +V+  L   YA   +   A     
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGL--KPNVVVYSTLIMGYASEGRIEEARRLLD 209

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P I   N  +S L  + +++ A  +  E++   + P+  T    +  + K G
Sbjct: 210 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 269

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + F  M   G +P+   Y  LI+GH   G L  A+     +   G+ P+V T +
Sbjct: 270 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 329

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             I G  K G++ EA ++FSE+K   + P+V TY++LI+G+ + G  E    L++EM   
Sbjct: 330 AFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 389

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI  +I  YNAL+ GLCK G  ++A  L   + +  L P++ TYS +I G C  +N   A
Sbjct: 390 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F L+  M   G +P+  ++  L+   C+  D ++A  +  EML+K  A  ++  + L  G
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDG 508

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
                K + A +LF++M  + ++P        I+   + G+ E   L
Sbjct: 509 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 22/409 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           + L T+++++H L K  K + +  IL+G++                     C  +   F 
Sbjct: 78  INLITYNVLIHGLCKFGKMEKAAEILKGMITLG------------------CKPNSRTFC 119

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL + Y        A +   +M     +P   S    ++ L   + + +A    ++M  +
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PNV   + ++  +   G IE A  +   M   G  P +  YN +IS     G +  A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             +   ++  G++P+ +TF   I G+ K GK+ EA + F EM    + PN   Y  LING
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           + + GN     S++  +   G+  D+ T +A I GL K G+ ++A  +  +L +  LVP+
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 359

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TYS+LI+G C +   E+AF+L+  M   G  PN  I+  L+   C++ D  RA ++  
Sbjct: 360 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 419

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            M EK + PDS+  S +  G  +C  + +  A  LF +M  +G+ P  F
Sbjct: 420 GMPEKGLEPDSVTYSTMIDG--YCKSENVAEAFSLFHEMPSKGVQPHSF 466



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 173/354 (48%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K+   A  TF +M+  G  P   +C+  +   +    +D  L     M    I  N+ T 
Sbjct: 24  KRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITY 83

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++H  CK G +E+A E+ K M ++G  P+  T+  LI G+C +  +  A++  + MEK
Sbjct: 84  NVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEK 143

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
             + P+ +++  +I G C    L  AN++  +M  + + PNVV Y+TLI GY   G  E 
Sbjct: 144 RNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEE 203

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L + M  +G+  DI  YNA+I  L K GK ++A+  + ++    L P+A T+ A I 
Sbjct: 204 ARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFIL 263

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G         A + +  M+  G  PN  ++ +L++   +  +   A  +   +    + P
Sbjct: 264 GYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLP 323

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           D    S    GL   G+ + A+K+F +++ +GL+P  F     I+   + GE E
Sbjct: 324 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVE 377



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 160/361 (44%), Gaps = 51/361 (14%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A   F ++++ G +P + + +  +S       V+ A   + EM    I+PN++  N
Sbjct: 340 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 399

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G I+RA ++F  M   G  P   TY+T+I G+C    ++ A    + M   
Sbjct: 400 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 459

Query: 328 GIQPN----------------------------------VITFNTLIFGFCKKGKLHEAN 353
           G+QP+                                   ++FNTLI G+CK  K+ EA+
Sbjct: 460 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 519

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA-----------------SLYEEMLR 396
           ++F EM A  + P+ VTY T+I+ + + G  E                    +L+E+M+ 
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVA 579

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+K D +TY  +I   CKE    +A  L  ++    ++   + +  LIT  C R++   
Sbjct: 580 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 639

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L   M   G +P+      L+ +F +    D A  V   +    + PD+  L +L +
Sbjct: 640 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 699

Query: 517 G 517
           G
Sbjct: 700 G 700



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 129/288 (44%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN YT  ++    C+   +  A   F+ M+  G  P     + LI G   +G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +   ++ K++M   GI  N+IT+N LI G CK GK+ +A  I   M      PN  T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI GY +  N      L +EM +  +    ++Y A+I GLC       A  L++ +  + 
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN   YS LI G       E A +L   M  SG  P+   +  ++S   +    + A+
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             LLE+  + + PD++       G    GK   A K F +M   GL+P
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMP 288



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 121/239 (50%)

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M + G+ PN  T+  +  G C+  +++EA   F EM+ T + P+    + LI+G+ + G+
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +    + + M+  GI ++++TYN LI GLCK GK +KAA ++K +      PN+ T+  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C   N  RA +L   M +    P+   +  +++  C  +D   A ++L +M    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           + P+ ++ S L  G    G+ E A +L   M   G+ P  F     I+C  + G+ E  
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/322 (21%), Positives = 137/322 (42%), Gaps = 20/322 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  S       KLFD +    +  +   + +  +   Y   +    A   F +M 
Sbjct: 400 ALVDGLCKSGDIQRARKLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P     N  +        ++ A+  ++EM +   +  + + N ++  +CK   I+
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 516

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKN------------ 327
            A ++F+ M +   +P   TY T+I  HC  G +  A + FK + E+N            
Sbjct: 517 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576

Query: 328 ----GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
               G++P+ +T+  +I+  CK+  L EA ++  E+    +      ++ LI    +  +
Sbjct: 577 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 636

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
               + L +EM   G+K  +   + L+    + GK  +A  + + +    LVP+ +T   
Sbjct: 637 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLID 696

Query: 444 LITGQCVRKNSERAFQLYKSMI 465
           L+ G     +SE A  L K ++
Sbjct: 697 LVNGNLNDTDSEDARNLIKQLV 718


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 177/410 (43%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER----- 243
           C  SP +F+ L   Y     +  A     +M   G  P     N  +  +  SE      
Sbjct: 108 CYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV 167

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D+A   Y EM    +  N   ++      C +G  E+A  V + M S GFIP  +TY+ 
Sbjct: 168 LDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSK 227

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I   CN   +  A +    M++NGI P+V  + TLI  FCK G + +A   F EM+   
Sbjct: 228 VIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG 287

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            +PNVVTY  LI+ Y +         +YE ML  G   +I+TY ALI GLCK GK +KA+
Sbjct: 288 CAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKAS 347

Query: 424 YLVKDLDKNSL-----------------VPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            + K + K ++                  PN  TY AL+ G C     + A  L KSM  
Sbjct: 348 QIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSV 407

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
            GC PN  +++ L+   C+    D A E                                
Sbjct: 408 EGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDL 467

Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              VL +MLE   AP+ +I +E+  GL   GK + A KL   ME +G  P
Sbjct: 468 ALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNP 517



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 173/351 (49%), Gaps = 17/351 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A +   +M   GF+P   + +K +  L ++ +V+ A   ++EM+RN I+P+VY   
Sbjct: 202 KFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYT 261

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ +FCK G IE+A   F  ME  G  P+V TY  LI  +     +S A +   +M   
Sbjct: 262 TLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK 321

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS-----------------PNVVT 370
           G  PN++T+  LI G CK GK+ +A++I+  MK  NV                  PNV T
Sbjct: 322 GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFT 381

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  L++G  +    +    L + M   G + + + Y+ALI G CK GK  +A  +   + 
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +    PN  TYS+LI      K  + A ++   M+ + C PN  I+  ++   C+    D
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A ++++ M EK   P+ +  + +  G    G+ E  ++L ++M  +G  P
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP 552



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 166/419 (39%), Gaps = 94/419 (22%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           F  A D   +MR    LP + +    L   L+ E++         M      P+    N 
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN-----KGLLSLAMK---- 319
           ++HA+C+ G    A ++ K M   G  P    YN LI G C+     K +L LA K    
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 320 --------------------------------FKNLMEKNGIQPNVITFNTLIFGFCKKG 347
                                            + +M K G  P+  T++ +I   C   
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSK-GFIPDTSTYSKVIGYLCNAS 236

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI-------- 399
           K+ +A ++F EMK   ++P+V  Y TLI+ + + G  E   + ++EM R+G         
Sbjct: 237 KVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYT 296

Query: 400 ----------KV-----------------DILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
                     KV                 +I+TY ALI GLCK GK +KA+ + K + K 
Sbjct: 297 ALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKE 356

Query: 433 SL-----------------VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           ++                  PN  TY AL+ G C     + A  L KSM   GC PN  +
Sbjct: 357 NVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVV 416

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ++ L+   C+    D A EV   MLE    P+    S L   L    + +LA+K+  KM
Sbjct: 417 YDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 140/317 (44%), Gaps = 5/317 (1%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F+P      K +S L ++   + A+ F   MR +   PNV T  +++        + R  
Sbjct: 38  FVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCK 97

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +   M + G  PS   +N+L+  +C  G  + A K    M + G QP  + +N LI G 
Sbjct: 98  RILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGI 157

Query: 344 CK-----KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           C      K  L  A + + EM    V  N V  +        +G  E   ++  EM+  G
Sbjct: 158 CSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKG 217

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D  TY+ +I  LC   K +KA  L +++ +N + P+   Y+ LI   C     E+A 
Sbjct: 218 FIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQAR 277

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +  M R GC PN   +  L+  + ++    +A EV   ML K   P+ +  + L  GL
Sbjct: 278 NWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGL 337

Query: 519 HHCGKDELAMKLFRKME 535
              GK E A ++++ M+
Sbjct: 338 CKAGKIEKASQIYKIMK 354



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 142/316 (44%), Gaps = 14/316 (4%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
           F  SL  S +   AL     + +    P+      ++   C+  + E A++    M +  
Sbjct: 16  FAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEAMDFLTRMRASS 72

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P+V TY  L+ G  NK  L    +  ++M   G  P+   FN+L+  +C+ G    A 
Sbjct: 73  CLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAY 132

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSE--------MGASLYEEMLRNGIKVDILT 405
           ++  +M      P  V YN LI G   + +SE        +    Y EML  G+ ++ + 
Sbjct: 133 KLLKKMVQCGCQPGYVVYNILIGG---ICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVN 189

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            +     LC  GK +KA  +++++     +P+ STYS +I   C     E+AFQL++ M 
Sbjct: 190 ISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMK 249

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           R+G  P+ +++  L+ +FC+    ++A     EM     AP+ +  + L        K  
Sbjct: 250 RNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVS 309

Query: 526 LAMKLFRKMEIRGLLP 541
            A +++  M  +G  P
Sbjct: 310 KANEVYEMMLSKGCTP 325



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/316 (27%), Positives = 140/316 (44%), Gaps = 8/316 (2%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           S   C+ + +V+D L        K   A + F  M + G+ P + + +  +  L   +R+
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRL 465

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D+AL    +M  N  +PNV     ++   CK+G  + A ++   ME  G  P+V TY  +
Sbjct: 466 DLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAM 525

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G    G +   ++    M   G  PN +T+  LI   C  G L EA+++  EMK T  
Sbjct: 526 IDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYW 585

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYE--EMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +V  Y  +I G+    N E  ASLY   E+  N        Y  LI    K G+ + A
Sbjct: 586 PRHVAGYRKVIEGF----NREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIA 641

Query: 423 AYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             L ++L   S     N + +  LI    +   +++AF+LY  MI  G  P   I   L+
Sbjct: 642 LELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLI 701

Query: 481 STFCQNEDFDRAAEVL 496
               +   ++ A ++L
Sbjct: 702 KGLLRVNRWEEALQLL 717



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 145/321 (45%), Gaps = 8/321 (2%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +  L  + +V  A    K M      PN    + ++   CK G ++ A EV
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEV 436

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G+ P+V TY++LI        L LA+K  + M +N   PNV+ +  +I G CK
Sbjct: 437 FTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK  EA ++   M+    +PNVVTY  +I+G+G+ G  E    L ++M   G   + +T
Sbjct: 497 VGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVT 556

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS-- 463
           Y  LI   C  G   +A  L++++ +     + + Y  +I G     N E    LY S  
Sbjct: 557 YRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGF----NREFIASLYLSFE 612

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM--LEKCMAPDSIILSELYSGLHHC 521
           +  +   P   ++ +L+  F +    + A E+  E+       A +  I   L   L   
Sbjct: 613 ISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLA 672

Query: 522 GKDELAMKLFRKMEIRGLLPK 542
            K + A +L+  M  RG +P+
Sbjct: 673 HKADKAFELYADMISRGSIPE 693



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 3/144 (2%)

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G ++D  T       LCK GK ++A  L   L+K   VP+   Y+ +I+G C     E A
Sbjct: 5   GYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASLFEEA 61

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                 M  S C PN   + +L+      E   R   +L  M+ +   P   I + L   
Sbjct: 62  MDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHA 121

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G    A KL +KM   G  P
Sbjct: 122 YCRSGDYAYAYKLLKKMVQCGCQP 145


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 202/429 (47%), Gaps = 32/429 (7%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA 204
           +V H+L + ++      +L  +L  +       L + +L S+R  DSS +V+D+L   Y+
Sbjct: 131 VVSHVLARKKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYS 190

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS----------------------- 241
                 +A     +M+D  F+  I++ N  L +L  S                       
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSS 250

Query: 242 ---------ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
                     R   A+ F+++       P+V + N +M  +CKLG ++ A   F  M   
Sbjct: 251 IVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKH 310

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P   +YN LI G C  G +  A+  KN ME +G++P+++T+N L  GF   G ++ A
Sbjct: 311 GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGA 370

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             I  +M     +PN+VTY  LI G+ Q+GN E    LY+EM+ +G ++ I++   L+  
Sbjct: 371 WNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGS 430

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK  +   A  L  +++ N L P+  TYS LI G C +   ++A  LY+ M  +   PN
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I   ++   C+     +A      ++   ++ D I+ + +  G    G    A+KL++
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYK 550

Query: 533 KMEIRGLLP 541
           ++  +G+ P
Sbjct: 551 QLGEKGISP 559



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 178/371 (47%), Gaps = 44/371 (11%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   + +M  +GF   I S    L SL  S +VD+A   + EM  N + P++ T + ++H
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKN--- 327
             CK G +++A+ +++ M S   IP+   +  ++ G C KG +S A M F  L+  N   
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL 524

Query: 328 -------------------------------GIQPNVITFNTLIFGFCKKGKLHEANRIF 356
                                          GI P ++TFN+L++GFC   KL +A R+ 
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +K   + PN VTY TL+N Y + GN +    L  EM    I    +TY  +I GLCK+
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQ 644

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            K +++  L++D+D   L P+  +Y+ +I   C  ++  +AFQLY  M+     P    +
Sbjct: 645 WKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTY 704

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
            +L++ FC   D   A  +L+ +  + +  +    + +     HC K ++  A+  FR+M
Sbjct: 705 NILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKA--HCAKGDVDKAVVYFRQM 762

Query: 535 EIRGLLPKGFD 545
                + KGF+
Sbjct: 763 -----VEKGFE 768



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 200/457 (43%), Gaps = 39/457 (8%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L F   +QT+      L   +I+  +  + +   + +S     +  D     S+  D++L
Sbjct: 208 LNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVL 267

Query: 184 Y----SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +      +    S + F+ +   Y        A   FC M  +G LP   S N  +  L 
Sbjct: 268 FFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLC 327

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  +  AL    +M  + + P++ T N++   F  LG+I  A  + + M   G  P++ 
Sbjct: 328 IAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLV 387

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  LI GHC  G +  A+K    M  +G Q ++I+   L+   CK  ++  A ++F EM
Sbjct: 388 TYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM 447

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI-------------------- 399
           +A  + P+++TY+TLI+G  + G  +    LYE+M  N I                    
Sbjct: 448 EANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKI 507

Query: 400 ---------------KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                           +DI+ YN +I G  K G T++A  L K L +  + P   T+++L
Sbjct: 508 SQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSL 567

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G C+ +   +A +L  ++   G  PN   +  LM+ +C+  +     E+L EM  K +
Sbjct: 568 MYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAI 627

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P  I  + +  GL    K + + +L   M+  GL P
Sbjct: 628 GPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTP 664



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 147/298 (49%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V+ AL  YKEM  +    ++ +  +++ + CK   ++ A ++F  ME+ G  P + TY+T
Sbjct: 402 VEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYST 461

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C +G +  A+     M  N I PN +    ++ G C+KGK+ +A   F  +  +N
Sbjct: 462 LIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSN 521

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +S +++ YN +I+GY + GN+     LY+++   GI   I+T+N+L+ G C   K  +A 
Sbjct: 522 LSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQAR 581

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+  +  + L PNA TY+ L+   C   N +   +L   M      P    + +++   
Sbjct: 582 RLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGL 641

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+      + ++L +M    + PD +  + +            A +L+ KM +  L P
Sbjct: 642 CKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEP 699



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 140/294 (47%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  YK++    ISP + T N +M+ FC    + +A  +   ++  G  P+  TY TL++
Sbjct: 545 AVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMN 604

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            +C +G +   ++  + M+   I P  IT+  +I G CK+ KL E+ ++  +M A  ++P
Sbjct: 605 VYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTP 664

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + V+YNT+I  + +  +      LY++ML + ++   +TYN LI G C  G  K A  L+
Sbjct: 665 DQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLL 724

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L    +  N   Y+ +I   C + + ++A   ++ M+  G   +   +  ++   C+ 
Sbjct: 725 VSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKR 784

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
                A      ML   + PD  +   L +  H CG      +L  +M   G L
Sbjct: 785 CLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGWL 838



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/341 (23%), Positives = 159/341 (46%), Gaps = 2/341 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +IL G+ +          FD ++ S    D   ++++++   Y  R   R A   + Q+ 
Sbjct: 496 AILMGLCEKGKISQARMYFDYLITSNLSLD--IILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +     + ++  A      ++ + + PN  T   +M+ +C+ G ++
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+   M++    P+  TY  +I G C +  L  + +    M+  G+ P+ +++NT+I
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK   + +A +++ +M   N+ P  VTYN LING+   G+ +   +L   +    + 
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           ++   Y  +I   C +G   KA    + + +     +   YSA+I   C R     A   
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +  M+  G  P++ +FE+L++ F Q    +   E+L EM++
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIK 834



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 92/205 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + ++ K    + K + +      M   G  P   S N  + +   +  +  A   Y +
Sbjct: 632 ITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDK 691

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + P   T N++++ FC  G ++ A  +  ++++     +   Y T+I  HC KG 
Sbjct: 692 MLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGD 751

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+ +   M + G + ++  ++ +I   CK+  + EA   F  M +  V P+   +  
Sbjct: 752 VDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEV 811

Query: 374 LINGYGQVGNSEMGASLYEEMLRNG 398
           L+N + Q G+      L  EM+++G
Sbjct: 812 LLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 186/379 (49%), Gaps = 5/379 (1%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR ++ +   +   K  + ++Y   + D   +    L + +    K R AT     + + 
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDV--IACTSLIRGFCRSGKTRKATRIMEILENS 171

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + + N  +     S  +D AL   + + R  ++P+V T N ++ + C  G ++ A
Sbjct: 172 GAVPDVITYNVLIGGYCKSGEIDKAL---QVLERMSVAPDVVTYNTILRSLCDSGKLKEA 228

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +EV          P V TY  LI   CN   +  AMK  + M K G +P+V+T+N LI G
Sbjct: 229 MEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLING 288

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G+L EA +  + M      PNV+T+N ++      G       L  +MLR G    
Sbjct: 289 ICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPS 348

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+N LI  LC++    +A  +++ + K+  +PN+ +Y+ L+ G C  K  +RA +  +
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC P+   +  L++  C++   D A E+L ++  K  +P  I  + +  GL   G
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVG 468

Query: 523 KDELAMKLFRKMEIRGLLP 541
           K E A +L  +M  +GL P
Sbjct: 469 KTEYAAELLEEMRRKGLKP 487



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 163/304 (53%), Gaps = 2/304 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D +    + C    + +++L        +   A      M  YG  P + + N  L 
Sbjct: 265 KLLDEM--RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILR 322

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           S+  + R   A     +M R   SP+V T N++++  C+  ++ RA++V + M   G +P
Sbjct: 323 SMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMP 382

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  +YN L+ G C +  +  A+++  +M   G  P+++T+NTL+   CK GK   A  I 
Sbjct: 383 NSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +++ +   SP ++TYNT+I+G  +VG +E  A L EEM R G+K DI+TY+ L+ GL  E
Sbjct: 443 NQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCE 502

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           GK  +A  +  D++  S+ P+A TY+A++ G C  + + RA      M+  GC+P K  +
Sbjct: 503 GKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATY 562

Query: 477 EMLM 480
            +L+
Sbjct: 563 TILI 566



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 157/345 (45%), Gaps = 38/345 (11%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L+ +  ++  L F + M      P+V     ++  FC+ G   +A  + + +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P V TYN LI G+C  G +  A++   ++E+  + P+V+T+NT++   C  GKL E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQ---VLERMSVAPDVVTYNTILRSLCDSGKLKE 227

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +          P+V+TY  LI              L +EM + G K D++TYN LI 
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 412 GLCKEGKTKK-----------------------------------AAYLVKDLDKNSLVP 436
           G+CKEG+  +                                   A  L+ D+ +    P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  T++ LI   C ++   RA  + + M + GC PN   +  L+  FCQ +  DRA E L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             M+ +   PD +  + L + L   GK + A+++  ++  +G  P
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSP 452



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 127/272 (46%), Gaps = 18/272 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  +L                   + C  S + F++L  
Sbjct: 316 THNIILRSMCSTGRWMDAERLLADML------------------RKGCSPSVVTFNILIN 357

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               ++    A D   +M  +G +P   S N  L      +++D A+ + + M      P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G  + AVE+   + S G  P + TYNT+I G    G    A +  
Sbjct: 418 DIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELL 477

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G++P++IT++TL+ G   +GK+ EA +IF +M+  ++ P+ VTYN ++ G  + 
Sbjct: 478 EEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKA 537

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
             +         M+  G K    TY  LI G+
Sbjct: 538 QQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 189/385 (49%), Gaps = 5/385 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S++RG L + S +  SKLFD  +     C  ++   ++ L        K   A   + +M
Sbjct: 404 SLIRGYLKARSPEEASKLFDEAV----ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKM 459

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P + S N  +        +D A G + EM    + PN+ T +++M  + K G  
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A  ++  M      PS  T N +I+G C  G  S +      + + G  P  +T+N +
Sbjct: 520 EYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCI 579

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GF K+G ++ A  +++EM    VSPNV TY  LING+ +  N ++   + +EM   GI
Sbjct: 580 IDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGI 639

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           ++D+  Y ALI G C++G    A+ L+ +L +  L PN   YS++I+G    +N E A  
Sbjct: 640 ELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALH 699

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+K MI  G   +  I+  L+S   +      A+E+  EML K + PD I  S L  GL 
Sbjct: 700 LHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLC 759

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
           + G+ E A K+   M+ + + P  F
Sbjct: 760 NKGQLENAQKILEDMDRKCMTPTVF 784



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 232/560 (41%), Gaps = 66/560 (11%)

Query: 24  STINIFPFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNP-IPIPHRTLPEPKGQDLDFV 82
           S+I  F  R + +   TL   P   N  +SE  +  N +P    P ++ P          
Sbjct: 7   SSIPHFTLRSIKS-PKTLSSQPELPNIPISETPLSQNPHPNTNFPGKSAP---------- 55

Query: 83  NIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLET 142
                          T+  + LT  +    LL  Q D   +L +FTW    +    +++ 
Sbjct: 56  ---------------TSQDSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDA 100

Query: 143 HSIVLHILTKNRK-FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD--SSPLVFDLL 199
             ++LHILTK+ +    + ++L      D   +PS +   ++ S R  D  S   VF+ L
Sbjct: 101 LCVLLHILTKSTETCGKARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYL 160

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
             +Y   K+  +A D F  + +   +P +   N FLS L+ +  +  A   Y +M    +
Sbjct: 161 LNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGV 220

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             +  T+++++ A  + G +E A   F+  ++ G       Y+ +I   C K     A+ 
Sbjct: 221 KGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALG 280

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFC-KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
               M   G  P+ + F T + G C K+GK+ EA ++  EM +     NVV   TL+ GY
Sbjct: 281 LLREMRDKGWVPHEVIF-TRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP-- 436
            + G+ +    L+++M  NGI  + +TY  +I   CK G   KA  +   +    + P  
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTV 399

Query: 437 --------------------------------NASTYSALITGQCVRKNSERAFQLYKSM 464
                                           N  TY++L++  C       A  +++ M
Sbjct: 400 FNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKM 459

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +R G RP+   +  ++   CQ  D D A  V +EMLEK + P+ I  S L  G    G  
Sbjct: 460 VRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDT 519

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
           E A  L+ +M    + P  F
Sbjct: 520 EYAFGLYDRMRGENIAPSDF 539



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 162/324 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   Y  +     A   + +MR     P   +CN  ++ L  + R   +    K+
Sbjct: 504 ITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKK 563

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +    P   T N ++  F K G +  A+ V+  M  +G  P+V TY  LI+G C    
Sbjct: 564 LVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNN 623

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           + LA+K  + M+  GI+ +V  +  LI GFC+KG +  A+++ SE++   +SPN V Y++
Sbjct: 624 MDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSS 683

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G+ ++ N E    L++ M+  GI  D+  Y  LI GL KEGK   A+ L  ++    
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++P+  TYS LI G C +   E A ++ + M R    P   I+  L++   +  +   A 
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803

Query: 494 EVLLEMLEKCMAPDSIILSELYSG 517
            +  EML+K + PD      L +G
Sbjct: 804 RLHNEMLDKGLVPDDTTYDILVNG 827



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 1/334 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MRD G++P      + +   +   ++  A+    EM       NV     +M  +CK G
Sbjct: 284 EMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQG 343

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A+E+F  M   G  P+  TY  +I   C  G +  A +  N M+   I P V   N
Sbjct: 344 DLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVN 403

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G+ K     EA+++F E  A  ++ NV TYN+L++   + G      S++E+M+R 
Sbjct: 404 SLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRK 462

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++  +++YN +ILG C++G    A  +  ++ +  L PN  TYS L+ G   + ++E A
Sbjct: 463 GVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYA 522

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F LY  M      P+     ++++  C+      + + L +++++   P  +  + +  G
Sbjct: 523 FGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDG 582

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
               G    A+ ++ +M   G+ P  F     IN
Sbjct: 583 FVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 131/272 (48%), Gaps = 35/272 (12%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           + D   ++   GF+P   + N  +   +    V+ AL  Y EM +  +SPNV+T   +++
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLIN 616

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FCK   ++ A++V   M++ G    VT Y  LI G C KG +  A +  + +++ G+ P
Sbjct: 617 GFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSP 676

Query: 332 NVITFNTLIFGF----------------------C-------------KKGKLHEANRIF 356
           N + ++++I GF                      C             K+GKL  A+ ++
Sbjct: 677 NKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELY 736

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +EM A  + P+++TY+ LI+G    G  E    + E+M R  +   +  YN LI G  KE
Sbjct: 737 AEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKE 796

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           G  ++A  L  ++    LVP+ +TY  L+ G+
Sbjct: 797 GNLQEAFRLHNEMLDKGLVPDDTTYDILVNGK 828



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 2/229 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   S++ DL  K+ D +       D +  V+  L   +  +    NA+    +++
Sbjct: 613 NLINGFCKSNNMDLALKVMDEMKNKGIELDVT--VYCALIDGFCRKGDMVNASQLLSELQ 670

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P     +  +S     + ++ AL  +K M    I  ++     ++    K G + 
Sbjct: 671 EVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLL 730

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E++  M + G +P + TY+ LI G CNKG L  A K    M++  + P V  +NTLI
Sbjct: 731 FASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLI 790

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            G  K+G L EA R+ +EM    + P+  TY+ L+NG  + GN   GAS
Sbjct: 791 TGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGAS 839



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 97/224 (43%), Gaps = 2/224 (0%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            FN L+  + K  ++++A   F+ +   ++ P +   N  ++   +         +Y +M
Sbjct: 156 VFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKM 215

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G+K D  T + +I    +EGK ++A    ++     +  +A  YS +I   C + +S
Sbjct: 216 ASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDS 275

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP-DSIILSE 513
             A  L + M   G  P++ IF  ++    +      A +V  EML  C  P + ++ + 
Sbjct: 276 VAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLS-CGKPMNVVVATT 334

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           L  G    G  + A++LF KM   G+ P        I    +NG
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378


>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 625

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 214/489 (43%), Gaps = 72/489 (14%)

Query: 122 LSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSESIL-----RGILDSDSF--- 172
           LS   F W+++  P+   +L++   ++HILTK +  K+++S+L     R  L + S    
Sbjct: 59  LSWALFKWIESSIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSA 118

Query: 173 --------DLPSKLFDSILYSY---RMCDSSPLVF------------------------- 196
                   D+ S +F  ++  Y   +M   +  VF                         
Sbjct: 119 LVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKD 178

Query: 197 ---DLLFKTYAHRKKF----------------------RNATDTFCQMRDYGFLPIIESC 231
              D+++K Y    +                         A +   +M      P + + 
Sbjct: 179 RLTDMVWKVYKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTY 238

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +S          AL     M R  I P++ T N ++H FCK G +  A+ +FK +  
Sbjct: 239 NTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEIRD 298

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P+  TY TLI G+C    L  A++ +  ME  G+ P V+T+N+++   C+ G++ +
Sbjct: 299 A--TPNHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRD 356

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN++ +EM    + P+ VT NTLIN Y ++G+ +    +   M+  G+K+D  TY ALI 
Sbjct: 357 ANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYKALIH 416

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK  +   A  L+  +      P+  TYS L+ G C ++N E   +L    +R G   
Sbjct: 417 GFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRKGLCV 476

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +K ++  L+  FC+ E  D A ++   M EK    DS+I + L       GK   A  L 
Sbjct: 477 DKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAASDLL 536

Query: 532 RKMEIRGLL 540
            +M  R L+
Sbjct: 537 DEMYKRRLM 545



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R+A     +M +    P   +CN  +++      +  AL     M    +  + +T  
Sbjct: 353 RIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYK 412

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++H FCK+  ++ A E+  +M   GF PS  TY+ L+ G+CN+      +K  +   + 
Sbjct: 413 ALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRK 472

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  +   +  LI  FCK+ ++  A +IFS M+      + V Y +L   Y ++G +   
Sbjct: 473 GLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTSLAYAYWKLGKANAA 532

Query: 388 ASLYEEMLRNGIKVDILTYNAL 409
           + L +EM +  + + +  Y AL
Sbjct: 533 SDLLDEMYKRRLMITLKIYRAL 554



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 116/263 (44%), Gaps = 2/263 (0%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            ++ L+  + N  +   A++    M  NG +P++     L+    K        +++ +M
Sbjct: 132 VFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDMVWKVYKKM 191

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               V  N+  YN LI+   + G+ E   +L  EM    +  D+ TYN LI   CK+G  
Sbjct: 192 ARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCKKGMH 251

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  +   +++  + P+  TY++LI G C       A +L+K  IR    PN   +  L
Sbjct: 252 YEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKE-IRDAT-PNHVTYTTL 309

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  +C+  D D+A  +  EM  + + P  +  + +   L   G+   A KL  +M  + +
Sbjct: 310 IDGYCRLNDLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEMSEKKI 369

Query: 540 LPKGFDKLRTINCAPENGEKESG 562
            P        IN   + G+ +S 
Sbjct: 370 EPDNVTCNTLINAYCKIGDMKSA 392


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 175/347 (50%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F L+     +  +   A      M + GF+    +C   + +      V+  +G++ +M 
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++PNV     +++  CK G I++A E+ + M   G+ P+V T+ TLI G C KG   
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 316 LAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A + F  L+  +G +PNV T+  +I G+CK+ KL+ A  + S M+   + PN  TY TL
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ +VGN      L + M + G   +I TYNA+I GLCK+G   +A  L+  +  + L
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             +  TY+ L++  C + ++ R+   +  M++ G  P+ H +  L+S FC+ +    +  
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESER 526

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  E +   + P     + +  G    G   LA+KLF++M   G  P
Sbjct: 527 LFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAP 573



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 171/350 (48%), Gaps = 5/350 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V   +   +A   K + A +   +M++ G +   ++ N  L   +    V+IA   + EM
Sbjct: 156 VMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEM 215

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  +SP+  +  +++ A C +G +  A +    M   GFI    T   +I   C KG +
Sbjct: 216 CQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYV 275

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +  + +   M + G+ PNVI F  LI G CK+G + +A  +  EM      PNV T+ TL
Sbjct: 276 NRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTL 335

Query: 375 INGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R +G K ++ TY A+I G CKE K  +A  L+  + +  
Sbjct: 336 IDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN +TY+ LI G C   N  RA++L   M + G  PN + +  ++   C+    D A 
Sbjct: 396 LVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAY 455

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            +L ++    +  D +  + L S   HC + +   ++  F KM   G  P
Sbjct: 456 RLLNKVSVHGLQADGVTYTILMSV--HCRQADTNRSLVFFNKMLKVGFTP 503



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 173/359 (48%), Gaps = 12/359 (3%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG-FYKEM 254
           F  L      +   + A +   +M   G+ P + +    +  L      + A   F K +
Sbjct: 297 FTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLV 356

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R +   PNV+T   +++ +CK   + RA  +   M+  G +P+  TY TLI GHC  G  
Sbjct: 357 RSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNF 416

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  +LM K G  PN+ T+N +I G CKKG L EA R+ +++    +  + VTY  L
Sbjct: 417 VRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTIL 476

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + +  ++      + +ML+ G   DI +Y  LI   C++ + K++  L ++     L
Sbjct: 477 MSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGL 536

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P   TY+++I G C   N+  A +L++ M   GC P+   +  L+S  C+    D A  
Sbjct: 537 IPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARN 596

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDE--LAMKLFRKMEIRGLLPKGFDKLRTIN 551
           +   M++K ++P  +  + L     +C KD+   A+ +  ++E R         +RT+N
Sbjct: 597 LYDAMMDKGLSPCEV--TRLTLAYEYCKKDDSSTAINVLDRLEKR-------QWIRTVN 646



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 163/345 (47%), Gaps = 1/345 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           L+   +  +         F +M + G  P + +    ++ L     +  A    +EM R 
Sbjct: 264 LIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRR 323

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
              PNVYT   ++   CK G  E+A  +F K + S G+ P+V TY  +I+G+C +  L+ 
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNR 383

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    + M++ G+ PN  T+ TLI G CK G    A  +   M     SPN+ TYN +I+
Sbjct: 384 AEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIID 443

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G+ +    L  ++  +G++ D +TY  L+   C++  T ++      + K    P
Sbjct: 444 GLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTP 503

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  +Y+ LI+  C +K  + + +L++  +  G  P K  +  ++  +C+  +   A ++ 
Sbjct: 504 DIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLF 563

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             M     APDSI    L SGL    K + A  L+  M  +GL P
Sbjct: 564 QRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSP 608



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 153/309 (49%), Gaps = 3/309 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+    EM+   +  +  TLN V+     +G++E A  +F  M   G  P   ++  ++ 
Sbjct: 173 AVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVV 232

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN G +  A K+ N M + G   +  T   +I  FC+KG ++     F +M    ++P
Sbjct: 233 ACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAP 292

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL- 425
           NV+ +  LING  + G+ +    L EEM+R G K ++ T+  LI GLCK+G T+KA  L 
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF 352

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +K +  +   PN  TY+A+I G C      RA  L   M   G  PN + +  L+   C+
Sbjct: 353 LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG-- 543
             +F RA E++  M ++  +P+    + +  GL   G  + A +L  K+ + GL   G  
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472

Query: 544 FDKLRTINC 552
           +  L +++C
Sbjct: 473 YTILMSVHC 481



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 151/316 (47%), Gaps = 3/316 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +R  G+ P + +    ++     ++++ A      M+   + PN  T   ++   CK+G 
Sbjct: 356 VRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGN 415

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             RA E+   M   GF P++ TYN +I G C KG L  A +  N +  +G+Q + +T+  
Sbjct: 416 FVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTI 475

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+   C++   + +   F++M     +P++ +Y TLI+ + +    +    L+EE +  G
Sbjct: 476 LMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLG 535

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +     TY ++I G C+ G T  A  L + +  +   P++ TY ALI+G C     + A 
Sbjct: 536 LIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDAR 595

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            LY +M+  G  P +     L   +C+ +D   A  V L+ LEK     ++  + L   L
Sbjct: 596 NLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINV-LDRLEKRQWIRTV--NTLVRKL 652

Query: 519 HHCGKDELAMKLFRKM 534
              GK ++A   F K+
Sbjct: 653 CSEGKLDMAALFFHKL 668



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 98/235 (41%), Gaps = 5/235 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+    S D   +L + +  S     +  + + +L   +  +     +   F +M 
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKV--SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P I S    +S     +++  +   ++E     + P   T   ++  +C+ G   
Sbjct: 498 KVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV++F+ M + G  P   TY  LISG C +  L  A    + M   G+ P  +T  TL 
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           + +CKK     A  +   ++       + T NTL+      G  +M A  + ++L
Sbjct: 618 YEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/243 (20%), Positives = 97/243 (39%), Gaps = 43/243 (17%)

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           KNL   N +         ++  F + GKL EA  +  EM+   +  +  T N +++    
Sbjct: 148 KNLERANEV------MQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVG 201

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNAS 439
           +G  E+  +++ EM + G+  D +++  +++  C  G+  +A  +L   +++  +V NA+
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNAT 261

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
                                                 +++  FCQ    +R      +M
Sbjct: 262 C------------------------------------TLIIDAFCQKGYVNRVVGYFWKM 285

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           +E  +AP+ I  + L +GL   G  + A +L  +M  RG  P  +     I+   + G  
Sbjct: 286 VEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWT 345

Query: 560 ESG 562
           E  
Sbjct: 346 EKA 348


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 182/350 (52%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K++        QM  +G  P + + N  ++S     R   A    
Sbjct: 66  STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVL 125

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +  + P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  
Sbjct: 126 AKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 185

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  + A++    ME+   QP+V+ + ++I   CK  ++ EA  +FS+M    +SP++ TY
Sbjct: 186 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 245

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            +LI+    +   +   +L  +M+ + I  D++ ++ ++  LCKEGK  +A  +V  +  
Sbjct: 246 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 305

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY+AL+ G C++   + A +++ +M+ +G  PN   +  L++ +C+ +  D+
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM +K + P+++  + L  GL H G+ + A+ LF +M   G +P
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP 415



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 176/350 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +V+  +  +    ++   A + F +M   G  P I +    + SL +        
Sbjct: 203 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 262

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  ++I P+V   + V+ A CK G I  A +V   M   G  P+V TYN L+ GH
Sbjct: 263 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 322

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  + M  NG  PNVI++NTLI G+CK  ++ +A  +F EM    + PN 
Sbjct: 323 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 382

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTL++G   VG  +   +L+ EM+ +G   D+ TY  L+  LCK+    +A  L+K 
Sbjct: 383 VTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 442

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ +++ P+   Y+ +I G C     E A  ++ ++   G RPN   + ++++  C+   
Sbjct: 443 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 502

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            D A ++ +EM     +PD    + +  GL    +   A++L ++M  RG
Sbjct: 503 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 164/318 (51%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +      + SL    +V  A   + +M    ISP+++T   ++H+ C L   +    +
Sbjct: 205 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 264

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M +   +P V  ++T++   C +G ++ A    ++M   G++PNV+T+N L+ G C 
Sbjct: 265 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 324

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ EA ++F  M     +PNV++YNTLINGY ++   +    L+EEM +  +  + +T
Sbjct: 325 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ GLC  G+ + A  L  ++  +  +P+ +TY  L+   C + + + A  L K++ 
Sbjct: 385 YNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 444

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S   P+  I+ +++   C+  + + A ++   +  K + P+    + + +GL   G  +
Sbjct: 445 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 504

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A KLF +M+  G  P G
Sbjct: 505 EANKLFMEMDGNGCSPDG 522



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 156/318 (49%), Gaps = 2/318 (0%)

Query: 192 SPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP +F    L  +  +  ++++ T    QM +   +P +   +  + +L    ++  A  
Sbjct: 239 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 298

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M    + PNV T N +M   C    ++ AV+VF  M   G+ P+V +YNTLI+G+C
Sbjct: 299 VVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC 358

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A      M +  + PN +T+NTL+ G C  G+L +A  +F EM A    P++ 
Sbjct: 359 KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLA 418

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY  L++   +  + +   +L + +  + +  DI  Y  +I G+C+ G+ + A  +  +L
Sbjct: 419 TYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 478

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L PN  TY+ +I G C R   + A +L+  M  +GC P+   +  +     QN++ 
Sbjct: 479 SSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEA 538

Query: 490 DRAAEVLLEMLEKCMAPD 507
            RA ++L EML +  + D
Sbjct: 539 LRAIQLLQEMLARGFSAD 556



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 146/308 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F  +        K   A D    M   G  P + + N  +        +D A+  +  
Sbjct: 278 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 337

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N  +PNV + N +++ +CK+  +++A  +F+ M     IP+  TYNTL+ G C+ G 
Sbjct: 338 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR 397

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   + M  +G  P++ T+  L+   CKK  L EA  +   ++ +N+ P++  Y  
Sbjct: 398 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 457

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  E    ++  +   G++ ++ TY  +I GLC+ G   +A  L  ++D N 
Sbjct: 458 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 517

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ +  G    K + RA QL + M+  G   +     +L+   C ++      
Sbjct: 518 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 577

Query: 494 EVLLEMLE 501
           ++L E ++
Sbjct: 578 QILSEFVQ 585



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + ++ L   +  + +   A   F  M   G+ P + S N  ++     +R+D 
Sbjct: 306 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 365

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++EM +  + PN  T N +MH  C +G ++ A+ +F  M + G IP + TY  L+ 
Sbjct: 366 ATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 425

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C K  L  AM     +E + + P++  +  +I G C+ G+L  A  IFS + +  + P
Sbjct: 426 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 485

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +ING  + G  +    L+ EM  NG   D  TYN +  GL +  +  +A  L+
Sbjct: 486 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 545

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           +++       + ST + L+   C  K  +   Q+    ++
Sbjct: 546 QEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 11/232 (4%)

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +LSL   F +L   N      + FNTL           +A   F+ M   +  P+ V +N
Sbjct: 23  VLSLPPYFSSL-SHNRFHSKSLNFNTL----------DDALSSFNRMLHMHPPPSTVDFN 71

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L+    +        SL  +M   GI  D+ T N LI   C   +   A  ++  + K 
Sbjct: 72  RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL 131

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L P+ +T++ LI G CV      A  L+  MI  G +PN   +  L++  C+  + + A
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 191

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +L  M +    PD ++ + +   L    +   A  LF KM  +G+ P  F
Sbjct: 192 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 243


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 202/447 (45%), Gaps = 20/447 (4%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           ++L     +L P  V  VL ++  D   +++FF W         +  T + +L    + +
Sbjct: 88  RRLCEFGGYLVPSVVGRVLQQLD-DLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKK 146

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           K + +  + +                   +   +C    + +  L   +   + F+ A  
Sbjct: 147 KAQEAYDLFKN------------------HRCGLCSPDSITYSTLINGFCKARDFQQAYR 188

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              +M   G +P     N  +  L D+ RVD AL  Y++M+RN  +P+V T  +++ A C
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDALC 247

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K   I  A  + ++M   G  P+V TYNTLI+G C  G +  A+   N M +N   P+V 
Sbjct: 248 KSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVF 307

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+N LI G+CK+ +  +  ++  EM      PN +TYNTL++   + G      +L + M
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           LR   K    T+N +I   CK G+   A  L + +     +P+  TY+ +I+G C     
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 427

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A QL + M  +GC P+   +  ++S  C+    D A EV   +       D +  S L
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             GL    + + A KL R+ME  G  P
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAP 514



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 193/419 (46%), Gaps = 37/419 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G     + D    LF+ +L +   C      +++L   Y  +++ ++      +M 
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLEN--SCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV 333

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            YG  P   + N  + SL+ S +   A    + M R    P+ +T N+++  FCK+G ++
Sbjct: 334 KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLD 393

Query: 281 RAVEVFKNMESMGFIPS-----------------------------------VTTYNTLI 305
            A E+F+ M   G +P                                    V TYN+++
Sbjct: 394 LAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIV 453

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG C    +  A +   ++   G   +V+T +TLI G CK  +L +A ++  EM+    +
Sbjct: 454 SGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSA 513

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VV Y  LI+G+ +    +   + + EML  G    ++TY+ +I  LCK  + +    L
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +K + +  + P+A  Y+++I G C   + + A++LYK M ++GC P    + +L+   C+
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               D A  +L  M      PD++  + ++ G     + + A +LF+ M+ RG  P  F
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPF 692



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 191/441 (43%), Gaps = 53/441 (12%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR----MCDSSPLV 195
           +E   IV H    N       +I++G+ D+   D       S L  YR     C  S + 
Sbjct: 193 MEKRGIVPHNAVYN-------TIIKGLCDNGRVD-------SALVHYRDMQRNCAPSVIT 238

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        +  +A+     M + G  P + + N  ++       +D A+  + +M 
Sbjct: 239 YTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQML 298

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL----------- 304
            N  SP+V+T N+++  +CK    +   ++ + M   G  P+  TYNTL           
Sbjct: 299 ENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYI 358

Query: 305 ------------------------ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                   I   C  G L LA +   LM   G  P++ T+N +I
Sbjct: 359 DAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMI 418

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C+  ++ +A ++   M      P+VVTYN++++G  +    +    +YE +   G  
Sbjct: 419 SGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYF 478

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D++T + LI GLCK  +   A  L++++++N   P+   Y+ LI G C     +++   
Sbjct: 479 LDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAF 538

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M+  GC P    + +++   C++        +L  MLE+ + PD+I+ + +  GL  
Sbjct: 539 FSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCK 598

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
               + A +L++ M+  G  P
Sbjct: 599 SDSYDEAYELYKLMKQTGCAP 619



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 160/347 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  S   F+L+   +    +   A + F  M D G LP I + N  +S    + R+D 
Sbjct: 370 RDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDD 429

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    + M      P+V T N ++   CK   ++ A EV++ + + G+   V T +TLI 
Sbjct: 430 ARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLID 489

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    L  A K    ME+NG  P+V+ +  LI GFCK  +L ++   FSEM      P
Sbjct: 490 GLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP 549

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            V+TY+ +I+   +      G  L + ML  G+  D + Y ++I GLCK     +A  L 
Sbjct: 550 TVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K + +    P   TY+ L+   C     + A  L + M   GC P+   +  +   F ++
Sbjct: 610 KLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKS 669

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            + D+A  +   M  +  +P   + S L + L    K + AM+++ +
Sbjct: 670 AEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEE 716



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 134/291 (46%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +        +   A + +  +R+ G+   + +C+  +  L  S R+D A 
Sbjct: 442 CPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAE 501

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM RN  +P+V    +++H FCK   +++++  F  M   G +P+V TY+ +I   
Sbjct: 502 KLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKL 561

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +         M + G+ P+ I + ++I G CK     EA  ++  MK T  +P V
Sbjct: 562 CKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTV 621

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN L++   +V   +    L E M  +G   D +TYN++  G  K  +  KA  L + 
Sbjct: 622 VTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQA 681

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +      P    YS L+T     +  ++A ++++  + +G   +  I   L
Sbjct: 682 MKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 130/273 (47%), Gaps = 6/273 (2%)

Query: 275 KLGIIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGI-QP 331
           +L  +++AV+ F       G+  S  T N L+S    K     A   FKN   + G+  P
Sbjct: 108 QLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKN--HRCGLCSP 165

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + IT++TLI GFCK     +A R+  EM+   + P+   YNT+I G    G  +     Y
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M RN     ++TY  L+  LCK  +   A+ +++D+ +    PN  TY+ LI G C  
Sbjct: 226 RDMQRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N + A  L+  M+ + C P+   + +L+  +C+ E     A++L EM++    P+ I  
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L   L   GK   A  L + M  R   P  F
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 377


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 151/569 (26%), Positives = 238/569 (41%), Gaps = 131/569 (23%)

Query: 98  TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH---KPSSLTLETHSIVLHILTKNR 154
           T LS + TP ++ H L + ++D    +  F W       KPSS   +    VLH L K  
Sbjct: 48  TRLSPNFTPTQLLHSLRR-EEDSSAVIHLFYWASKQPNFKPSSSIFKE---VLHKLGKAG 103

Query: 155 KFKSSESILR------GILDSDS----------FDLPSKLFDSI--------------LY 184
           +F + + IL+       ++D+DS          F L +++   +               Y
Sbjct: 104 EFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFY 163

Query: 185 SYRM---CDSSPL--------------------VFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ +    D + L                     F++L K      + R A     +M D
Sbjct: 164 NFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMED 223

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIAL-----------------------GFYKEMR--- 255
           +G LP  ++    +   ++   +D A+                       GF KE R   
Sbjct: 224 FGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEE 283

Query: 256 ----------RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                     R    P+ YT NM+++   K G ++ A+EV   M   GF P + TYN+LI
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLI 343

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG C  G +  A+K  N M +    PN +T+NT+I   CK+ ++ EA ++   +    + 
Sbjct: 344 SGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGIL 403

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V TYN+LI G     N  +   LY+EM   G   D  TYN LI  LC  GK ++A  L
Sbjct: 404 PDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNL 463

Query: 426 VKDLDKNSLVPNASTYSALITGQC-------------------VRKNS------------ 454
           +K+++ +    N  TY+ LI G C                   V +NS            
Sbjct: 464 LKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCK 523

Query: 455 ----ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               E A QL   MI  G RP+K  +  L++ FC+  D  +AA+++  M      PD + 
Sbjct: 524 SERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVT 583

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              L +GL   G+ E A KL R ++++G+
Sbjct: 584 YGTLIAGLCKAGRVEAATKLLRTIQMKGI 612



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 177/359 (49%), Gaps = 3/359 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      D   K+ + ++   R C  + + ++ +  T     +   AT     + 
Sbjct: 341 SLISGLCKLGEVDEAVKVLNQMIE--RDCSPNTVTYNTIISTLCKENQVEEATKLALVLT 398

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + + N  +  L  S    +A+  YKEM+     P+ +T NM++ + C  G ++
Sbjct: 399 GKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQ 458

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ + K ME  G   +V TYNTLI G C    ++ A +  + ME  G+  N +T+NTLI
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLI 518

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  ++ EA+++  +M    + P+  TYN+L+  + + G+ +  A + + M  +G +
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI+TY  LI GLCK G+ + A  L++ +    +      Y+ +I     RK S+ A +L
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNED-FDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++ MI     P+   ++++    CQ       A + ++EMLE+   P+      L  GL
Sbjct: 639 FREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGL 697


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+PN YT   V+  +CK+G ++ AV+VF  M 
Sbjct: 149 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 208

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + P    YN LI G+C++G L  A+ +++ M + G+   V T+N L+      G+ 
Sbjct: 209 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 268

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    ++P+V TYN LING+ + GN +    ++E M R G++  ++TY AL
Sbjct: 269 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTAL 328

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  L K+G+ ++   L  +  +  + P+   Y+ALI       N +RAF++   M +   
Sbjct: 329 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 388

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C     D A +++ EM E+ + PD +  + L SG    G  + A++
Sbjct: 389 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALR 448

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 449 IRNEMMNKGFNP 460



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNK 311
           E+ R    PN  T N V+  FC  G ++ A+++ + M E  G  P+  TY T+ISG C  
Sbjct: 135 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A+K F  ++ K  ++P  + +N LI G+C +GKL  A      M    V+  V T
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN L++     G       L EEM   G+  D+ TYN LI G CKEG  KKA  + +++ 
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  +     TY+ALI     +   +   +L+   +R G RP+  ++  L+++   + + D
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA E++ EM +K +APD +  + L  GL   G+ + A KL  +M  RG+ P
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQP 425



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 146/287 (50%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    D  ++D AL +   M    ++  V T N+++HA    G    A E+ + M  
Sbjct: 221 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 280

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V TYN LI+GHC +G +  A++    M + G++  V+T+  LI+   KKG++ E
Sbjct: 281 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE 340

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            +++F E     + P++V YN LIN +   GN +    +  EM +  I  D +TYN L+ 
Sbjct: 341 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 400

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+  +A  L+ ++ +  + P+  TY+ LI+G  ++ + + A ++   M+  G  P
Sbjct: 401 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               +  L+   C+N   D A  ++ EM+E  + PD      L  GL
Sbjct: 461 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 38/334 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   K+FD +L    +     ++++ L   Y  + K   A     +M 
Sbjct: 186 TVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDRMV 244

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + N  + +L    R   A    +EM    ++P+V+T N++++  CK G ++
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 304

Query: 281 RAVEVFKNMESMGFIPSVTTY-----------------------------------NTLI 305
           +A+E+F+NM   G   +V TY                                   N LI
Sbjct: 305 KALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 364

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           + H   G +  A +    MEK  I P+ +T+NTL+ G C  G++ EA ++  EM    + 
Sbjct: 365 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQ 424

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++VTYNTLI+GY   G+ +    +  EM+  G    +LTYNALI GLCK G+   A  +
Sbjct: 425 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 484

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           VK++ +N + P+ STY +LI G  +    ERA  
Sbjct: 485 VKEMVENGITPDDSTYISLIEG--LTTEDERAID 516



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNASTYSALITGQCVR 451
           E+LR   + + +TYN +I G C  G+ + A  +++++ ++  + PN  TY  +I+G C  
Sbjct: 135 ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 194

Query: 452 KNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              + A +++  M+  G  +P   ++  L+  +C     D A      M+E+ +A     
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L   L   G+   A +L  +M  +GL P  F
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 288


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 183/354 (51%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++   + ++++ +  +    K    A D + +M   G  P + + +  +S      +++ 
Sbjct: 190 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLND 249

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G + +M    I+P+VYT ++++  FCK G ++ A  V   M   G  P V TY +L+ 
Sbjct: 250 AIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMD 309

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    ++ A    N M + G+  NV ++N +I GFCK  K+ EA  +F EM   N+ P
Sbjct: 310 GYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP 369

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYN+LI+G  + G       L +EM   G+  D +TYN+++  LCK  +  KA  L+
Sbjct: 370 DVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 429

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + P+  TY+ LI G C     + A  +++ ++  G     + + +++  FC N
Sbjct: 430 TKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDN 489

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + FD+A  +L +M +    P++     +   L    ++++A KL R+M  RGLL
Sbjct: 490 DLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 157/305 (51%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++ L    +   AL   + +    + PNV   N ++ + CK+ ++  A +++  M S G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P V TY+ LISG C  G L+ A+   N M    I P+V TF+ L+ GFCK+G++ EA 
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            + + M    + P+VVTY +L++GY  V       S++  M + G+  ++ +YN +I G 
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK  K  +A  L K++   +++P+  TY++LI G C       A +L   M   G   +K
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  ++   C+N   D+A  +L +M ++ + PD    + L  GL   G+ + A  +F  
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 534 MEIRG 538
           + ++G
Sbjct: 467 LLVKG 471



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 181/372 (48%), Gaps = 35/372 (9%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + H+    +   +F ++ +    P I    K L SL+       A+  ++EM  N I+ +
Sbjct: 31  HHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASD 90

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           + T N++++ F +LG    +  VF N+   G+ P+  T  TLI G C KG +  A+ F +
Sbjct: 91  LVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHD 150

Query: 323 LMEKNG-----------------------------------IQPNVITFNTLIFGFCKKG 347
            +   G                                   +QPNV+ +NT+I   CK  
Sbjct: 151 KVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVK 210

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            ++EA  ++SEM +  +SP+VVTY+ LI+G+  +G       L+ +M+   I  D+ T++
Sbjct: 211 LVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFS 270

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ G CKEG+ K+A  ++  + K  + P+  TY +L+ G C+ K   +A  ++ +M + 
Sbjct: 271 ILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQG 330

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   N   + ++++ FC+ +  D A  +  EM  K + PD +  + L  GL   GK   A
Sbjct: 331 GVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYA 390

Query: 528 MKLFRKMEIRGL 539
           +KL  +M  RG+
Sbjct: 391 LKLVDEMHDRGV 402


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/443 (27%), Positives = 208/443 (46%), Gaps = 31/443 (6%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD----------- 170
           ++L  F W ++      +      +L IL +N   +S+  ++  +++++           
Sbjct: 403 MALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGG 462

Query: 171 --SFDLPSKLFDSILYSYR---MCDSSPLVFDLLFKT---------------YAHRKKFR 210
             S ++  K+ D +++ Y    M +    VFD + K+                  +    
Sbjct: 463 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 522

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A + +  M ++G  P I + N  L S     +V   L    EM+R   +PN  T N+++
Sbjct: 523 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 582

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +   K G  E+A  +   M   G   S  TYN LI G+ NKGLL+ A+  +  M   G  
Sbjct: 583 NGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGAS 642

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P V T+N+ I+G CK G++ +A +  S+M A N+ P+VV+YNTLI GY ++GN      L
Sbjct: 643 PTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLL 702

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++E+    +   I+TYN L+ GLC++G+ + A  L  ++    + P+  TY+ L+ G C 
Sbjct: 703 FDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCK 762

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             +   A + +  M+  G   + + +   +    +  D  RA  +  EML K   PD II
Sbjct: 763 MGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLII 822

Query: 511 LSELYSGLHHCGKDELAMKLFRK 533
            + +  GL   G  E A +L +K
Sbjct: 823 YNVVVDGLCKLGNLEEASELLQK 845


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 160/329 (48%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S N  L  L  S R D   G Y +M      PN YT   ++ + C+    E A  VF+ M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            + G  P+V +Y+ LI+G C    +  A +  N M   G QPNV+T+ +L+ G CK GKL
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +FS M      P+ V YN LI+G+ + G+      L+EEML  G    + TYN+L
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           + G  ++G+  +   L KD+ +   VPN  T++ L+ G C   +   A +L+  M   GC
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  L+   C       A  +L EM+   + PD +  + L  G    G  + A+K
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 530 LFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           LF ++   GL P  F     I+C    G+
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGK 347



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 170/360 (47%), Gaps = 18/360 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+  +L  L + ++F+ + S+ RG+                  + + C  +   + +L  
Sbjct: 54  TYGYLLRSLCQAQRFEEARSVFRGM------------------AAQGCSPNVFSYSILIA 95

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                +K   A +   +M D G  P + +    LS L    ++  A+  +  M      P
Sbjct: 96  GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +    N+++  F K G +  A  +F+ M   G IP+V TYN+L+SG   KG         
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLF 215

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G  PN+ TFN L+ GFCK G + EA+R+F EM++    P+VV+YNTLI G    
Sbjct: 216 KDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK 275

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L  EM+R+G+  DI++YN LI G  K G    A  L  ++ K+ L P+A +Y
Sbjct: 276 GKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSY 335

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S +I   C       AF ++K MI +G  P+  +   L+   C+ E    + E+   M++
Sbjct: 336 STIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVK 395



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 172/348 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++ L +  A   +  +   T+  M   G +P   +    L SL  ++R + A   ++ 
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SPNV++ ++++   C+   ++ A E+   M   G  P+V TY +L+SG C  G 
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   + M   G  P+ + +N LI GF KKG + EA R+F EM      P V TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+ + G      SL+++MLR G   +I T+N L+ G CK G   +A  L  ++    
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  +Y+ LI G C +     A +L + MIRSG  P+   + +L+  + ++   D A 
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  E+ +  + PD+   S +   L   GK   A  +F+ M   G  P
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAP 365



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 171/347 (49%), Gaps = 2/347 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   +  L ++    ++F  A   F  M   G  P + S +  ++ L   ++VD A 
Sbjct: 48  CVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAA 107

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM      PNV T   ++   CK+G ++ AV++F  M   G  P    YN LI G 
Sbjct: 108 ELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGF 167

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
             KG +  A + F+ ++EK G  P V T+N+L+ GF +KG+      +F +M      PN
Sbjct: 168 SKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPN 226

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           + T+N L++G+ ++G+      L+ EM   G   D+++YN LI G+C +GK  +A  L++
Sbjct: 227 IFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLR 286

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ ++ + P+  +Y+ LI G       + A +L+  + +SG  P+   +  ++   C+  
Sbjct: 287 EMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAG 346

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               A  V  +M+    APD+ ++  L  GL    +   + +LF+ M
Sbjct: 347 KVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 165/332 (49%), Gaps = 2/332 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G+           LF  ++Y  R C    +V+++L   ++ +     A   F +M 
Sbjct: 127 SLLSGLCKMGKLKEAVDLFSRMVY--RGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +P + + N  LS              +K+M R    PN++T N ++  FCK+G + 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F  M S+G  P V +YNTLI G C+KG    A +    M ++G+ P+++++N LI
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+ K G L  A ++F E+  + + P+  +Y+T+I+   + G       ++++M+ NG  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D      L++GLC+  +  ++  L + + K   VP    Y+ L+   C  K S+   ++
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEI 424

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           +  +   G  P+  I ++++ T  +++D D A
Sbjct: 425 FHELTERGFSPDVEISKVILETLRRSDDKDAA 456



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 59/213 (27%), Positives = 97/213 (45%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
             +++N L+    K G+       +++M A    PN  TY  L+    Q    E   S++
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
             M   G   ++ +Y+ LI GLC+  K  +AA L+ ++      PN  TY +L++G C  
Sbjct: 76  RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + A  L+  M+  GC P+  ++ +L+  F +  D   A  +  EMLEK   P     
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L SG    G+      LF+ M  +G +P  F
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIF 228


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 183/379 (48%), Gaps = 24/379 (6%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + D L+K   H     +A + + +M++ G  P + + N  +     S R   A    +EM
Sbjct: 255 IIDGLWKDGRHS----DAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEM 310

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              +I+PNV T + +++A+ K      A E++  M   G IP+  TYN++I G C +  L
Sbjct: 311 LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRL 370

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A     +M   G  P+V TFNTLI G+C   ++ +   +  EM  T +  +  TYNTL
Sbjct: 371 DAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTL 430

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK------- 427
           I+G+  VG+      L ++M+ +G+  DI+T N L+ GLC  GK K A  + K       
Sbjct: 431 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490

Query: 428 DLDK----NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           DLD     N + P+  TY+ LI+G         A +LYK M   G  PN   +  +++  
Sbjct: 491 DLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGL 550

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL---- 539
           C+    D A ++   M  K  +PD +  + L SG    G+ +  ++LF +M  RG+    
Sbjct: 551 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADA 610

Query: 540 -----LPKGFDKLRTINCA 553
                L  GF K+  IN A
Sbjct: 611 ITYITLIHGFRKVGNINGA 629



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 171/347 (49%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   GF P + + +  L  L   +RV  AL  + +M 
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC 174

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    PNV T   +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 175 R----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I+PNV+ ++ +I G  K G+  +A+ +++EM+   + P++ TYN +
Sbjct: 231 SALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCM 290

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+   G       L +EML   I  +++TY+ALI    KE K  +A  L  ++    +
Sbjct: 291 IDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TY+++I G C +   + A  ++  M   GC P+   F  L+  +C  +  D   E
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  D+   + L  G    G    A+ L ++M   G+ P
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 174/339 (51%), Gaps = 5/339 (1%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +   NK +  ++  ER D+ +  Y++M R +I  +VY+ 
Sbjct: 56  KGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSF 115

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++  FC    +  A+  F  +  +GF P V T++TL+ G C +  +S A+   + M  
Sbjct: 116 NILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM-- 173

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +PNV+TF TL+ G C++G++ EA  +   M    + PN +TY T+++G  ++G++  
Sbjct: 174 --CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + IK +++ Y+A+I GL K+G+   A  L  ++ +  + P+  TY+ +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A +L + M+     PN   +  L++ + +   F  A E+  EML + + 
Sbjct: 292 DGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGII 351

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P++I  + +  G     + + A  +F  M  +G  P  F
Sbjct: 352 PNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVF 390



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 175/376 (46%), Gaps = 15/376 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   S  +    +L   +L   R  + + + +  L   Y   +KF  A + + +M  
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLE--RKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P   + N  +       R+D A   +  M     SP+V+T N ++  +C    I+ 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             E+   M   G +   TTYNTLI G C  G L+ A+     M  +G+ P+++T NTL+ 
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 342 GFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGASL 390
           G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G       L
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y+EM   GI  + +TY+++I GLCK+ +  +A  +   +   S  P+  T++ L++G C 
Sbjct: 528 YKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCK 587

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               +   +L+  M R G   +   +  L+  F +  + + A ++  EM+   + PD+I 
Sbjct: 588 AGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTIT 647

Query: 511 LSELYSGLHHCGKDEL 526
           +  + + L    K+EL
Sbjct: 648 IRSMLTVLWS--KEEL 661



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 169/369 (45%), Gaps = 29/369 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S +++   K RKF  +E                +L+D +L   R    + + ++ +  
Sbjct: 321 TYSALINAYVKERKFFEAE----------------ELYDEMLP--RGIIPNTITYNSMID 362

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +  + +   A   F  M   G  P + + N  +     ++R+D       EM    +  
Sbjct: 363 GFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVA 422

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T N ++H FC +G +  A+++ + M S G  P + T NTL+ G C+ G L  A++  
Sbjct: 423 DTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMF 482

Query: 322 NLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             M+K           NG++P+V T+N LI G   +GK  EA  ++ EM    + PN +T
Sbjct: 483 KAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTIT 542

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+++ING  +    +    +++ M       D++T+N L+ G CK G+      L  ++ 
Sbjct: 543 YSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMG 602

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  +V +A TY  LI G     N   A  +++ MI SG  P+      +++     E+  
Sbjct: 603 RRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELK 662

Query: 491 RAAEVLLEM 499
           RA  +L ++
Sbjct: 663 RAVAMLEDL 671



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 171/393 (43%), Gaps = 18/393 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+   D       LF      ++MC  + + F  L        +   A     +M 
Sbjct: 152 TLLHGLCVEDRVSEALDLF------HQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMV 205

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGII 279
           + G  P   +    +  +        AL   ++M   + I PNV   + ++    K G  
Sbjct: 206 EDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRH 265

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A  ++  M+  G  P + TYN +I G C+ G  S A +    M +  I PNV+T++ L
Sbjct: 266 SDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSAL 325

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I  + K+ K  EA  ++ EM    + PN +TYN++I+G+ +    +    ++  M   G 
Sbjct: 326 INAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGC 385

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D+ T+N LI G C   +      L+ ++ +  LV + +TY+ LI G C+  +   A  
Sbjct: 386 SPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALD 445

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM-----------APDS 508
           L + MI SG  P+      L+   C N     A E+   M +  M            PD 
Sbjct: 446 LSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDV 505

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + L SGL + GK   A +L+++M  RG++P
Sbjct: 506 QTYNILISGLINEGKFLEAEELYKEMPHRGIVP 538



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 157/310 (50%), Gaps = 5/310 (1%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           K  S   + + ++ A+  + +M R+R  P+V   N +M    ++   +  + +++ ME  
Sbjct: 47  KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK 106

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
                V ++N LI   C+   L  A+     + K G QP+V+TF+TL+ G C + ++ EA
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M      PNVVT+ TL+NG  + G      +L + M+ +G++ + +TY  ++ G
Sbjct: 167 LDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222

Query: 413 LCKEGKTKKAAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           +CK G T  A  L++ +++ S + PN   YSA+I G         A  LY  M   G  P
Sbjct: 223 MCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFP 282

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  ++  FC +  +  A  +L EMLE+ + P+ +  S L +      K   A +L+
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELY 342

Query: 532 RKMEIRGLLP 541
            +M  RG++P
Sbjct: 343 DEMLPRGIIP 352



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 78/167 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L     +  KF  A + + +M   G +P   + +  ++ L    R+D A   +  M 
Sbjct: 508 YNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMG 567

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SP+V T N ++  +CK G ++  +E+F  M   G +    TY TLI G    G ++
Sbjct: 568 SKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNIN 627

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            A+     M  +G+ P+ IT  +++     K +L  A  +  +++ +
Sbjct: 628 GALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 180/365 (49%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++   +   +K   A  T  ++   G+ P     N  L+ L    RV  AL     M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
              P + TLN +++  C  G +  AV +   M   GF P+  TY  +++  C  G  +LA
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           M+    ME+  I+ + + ++ +I G CK G L  A  +F+EM+      +++TYNTLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +   G  + GA L  +M++  I  +++T++ LI    KEGK ++A  L+K++ +  + PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++LI G C     E A Q+   MI  GC P+   F +L++ +C+    D   E+  
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           EM  + +  +++  + L  G    GK E+A KLF++M  R + P        ++   +NG
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487

Query: 558 EKESG 562
           E E  
Sbjct: 488 ELEKA 492



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 173/330 (52%), Gaps = 4/330 (1%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           NA + F +M   GF   I + N  +    ++ R D      ++M + +ISPNV T ++++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            +F K G +  A ++ K M   G  P+  TYN+LI G C +  L  A++  +LM   G  
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++TFN LI G+CK  ++ +   +F EM    V  N VTYNTL+ G+ Q G  E+   L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++EM+   ++ DI++Y  L+ GLC  G+ +KA  +   ++K+ +  +   Y  +I G C 
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               + A+ L+ S+   G + +   + +++S  C+ +   +A  +  +M E+  APD + 
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580

Query: 511 LSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
            + L     H G D+   A +L  +M+  G
Sbjct: 581 YNILIRA--HLGDDDATTAAELIEEMKSSG 608



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 167/332 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A     +M + GF P   +    L+ +  S +  +A+   ++M    I  +    +
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++   CK G ++ A  +F  ME  GF   + TYNTLI G CN G      K    M K 
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            I PNV+TF+ LI  F K+GKL EA+++  EM    ++PN +TYN+LI+G+ +    E  
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + + M+  G   DI+T+N LI G CK  +      L +++    ++ N  TY+ L+ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     E A +L++ M+    RP+   +++L+   C N + ++A E+  ++ +  M  D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             I   +  G+ +  K + A  LF  + ++G+
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 166/342 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F+ L        +   A +   +M + G  P + + N  ++ L  + +V  A+     
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T   V++  CK G    A+E+ + ME          Y+ +I G C  G 
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N ME  G + ++IT+NTLI GFC  G+  +  ++  +M    +SPNVVT++ 
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       L +EM++ GI  + +TYN+LI G CKE + ++A  +V  +    
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  T++ LI G C     +   +L++ M   G   N   +  L+  FCQ+   + A 
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           ++  EM+ + + PD +    L  GL   G+ E A+++F K+E
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 35/369 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A D F  M     LP +   N+  S++  +++ ++ L   K+M    I+ ++YTL+
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+   +  A      +  +G+ P    +NTL++G C +  +S A++  + M + 
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT----------------- 370
           G +P +IT NTL+ G C  GK+ +A  +   M  T   PN VT                 
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 371 ------------------YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                             Y+ +I+G  + G+ +   +L+ EM   G K DI+TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C  G+    A L++D+ K  + PN  T+S LI           A QL K M++ G  PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  FC+    + A +++  M+ K   PD +  + L +G     + +  ++LFR
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 533 KMEIRGLLP 541
           +M +RG++ 
Sbjct: 428 EMSLRGVIA 436



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 152/307 (49%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           LSS L   + D A+  +++M ++R  P V   N +  A  K    E  + + K MES G 
Sbjct: 60  LSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI 119

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
             S+ T + +I+  C    LS A      + K G +P+ + FNTL+ G C + ++ EA  
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +   M      P ++T NTL+NG    G       L + M+  G + + +TY  ++  +C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G+T  A  L++ +++ ++  +A  YS +I G C   + + AF L+  M   G + +  
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+  FC    +D  A++L +M+++ ++P+ +  S L       GK   A +L ++M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359

Query: 535 EIRGLLP 541
             RG+ P
Sbjct: 360 MQRGIAP 366



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 2/327 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G  ++  +D  +KL   ++   R    + + F +L  ++    K R A     +M 
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + N  +       R++ A+     M      P++ T N++++ +CK   I+
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+F+ M   G I +  TYNTL+ G C  G L +A K    M    ++P+++++  L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  G+L +A  IF +++ + +  ++  Y  +I+G       +    L+  +   G+K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D   YN +I  LC++    KA  L + + +    P+  TY+ LI       ++  A +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + M  SG   +    +M+++     E
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGE 627



 Score = 46.2 bits (108), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 9/216 (4%)

Query: 329 IQPNVITFNTLIFGF--CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG-NSE 385
           +QP ++   TL      C    L    R FS     N+S     Y   ++  G VG  ++
Sbjct: 17  VQPRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLS-----YRDKLSS-GLVGIKAD 70

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L+ +M+++     ++ +N L   + K  + +    L K ++   +  +  T S +I
Sbjct: 71  DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C  +    AF     +++ G  P+  IF  L++  C       A E++  M+E    
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P  I L+ L +GL   GK   A+ L  +M   G  P
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 188/400 (47%), Gaps = 21/400 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++++L  + KN  F+ + ++L  +                    + C  + + ++++  
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEM------------------RAKGCTPNIVTYNVIIN 220

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 +  +A D   ++  YG  P   S    L  L  S+R D     + EM      P
Sbjct: 221 GMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMP 280

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  T +M++  FC+ G++ERA++V + M       + T  N +I+  C +G +  A KF 
Sbjct: 281 NEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFL 340

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M   G  P+ I++ T++ G C+  + ++A  +  EM   N  PN VT+NT I    Q 
Sbjct: 341 NNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK 400

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  E    L E+M  +G  V ++TYNAL+ G C +G    A  L + +      PN  TY
Sbjct: 401 GLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITY 457

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + L+TG C  +  + A +L   M+   C PN   F +L++ FCQ    D A E++ +M+E
Sbjct: 458 TTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               P+ I  + L+ G+      E A++L   +  +G+ P
Sbjct: 518 HGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSP 557



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 166/356 (46%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++  + +++  +   + +  +A      M  YG  P   S    L  L  +ER + A 
Sbjct: 313 CATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAK 372

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM RN   PN  T N  +   C+ G+IE+A+ + + M+  G    V TYN L++G 
Sbjct: 373 ELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGF 432

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A++   L      +PN IT+ TL+ G C   +L  A  + +EM   +  PNV
Sbjct: 433 CVQGHIDSALE---LFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNV 489

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N L+N + Q G  +    L E+M+ +G   +++TYN L  G+ K+  ++ A  L+  
Sbjct: 490 VTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHG 549

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+  T+S++I         E A Q++      G RP   ++  ++   C+  +
Sbjct: 550 LVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHE 609

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            D A + L  M+     P+      L  GL   G  + A  L   +  RG++ K  
Sbjct: 610 IDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSKNL 665



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 148/313 (47%), Gaps = 7/313 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P+I         L D  RV  AL    +M R    PNV T  +++ A CK    E+
Sbjct: 143 YTYTPLIRV-------LCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQ 195

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ V   M + G  P++ TYN +I+G C +G +  A    N +   G QP+ +++ TL+ 
Sbjct: 196 AMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLK 255

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +   +F+EM   N  PN VT++ LI  + + G  E    + ++M  +    
Sbjct: 256 GLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECAT 315

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +    N +I  +CK+G+   A   + ++      P+  +Y+ ++ G C  +    A +L 
Sbjct: 316 NTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELL 375

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+R+ C PN+  F   +   CQ    ++A  ++ +M E       +  + L +G    
Sbjct: 376 KEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQ 435

Query: 522 GKDELAMKLFRKM 534
           G  + A++LFR M
Sbjct: 436 GHIDSALELFRSM 448



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 118/528 (22%), Positives = 222/528 (42%), Gaps = 70/528 (13%)

Query: 67  PHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEF 126
           PH T P PK            HL  +   +  + +    P   +   L  ++D   +   
Sbjct: 12  PHATFPNPKPH----------HLAAAAATRPESPNVAPNPASARLRRLIAREDLAGAARL 61

Query: 127 FTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF--DSILY 184
                +    +  +   + ++  L +  +   +  +LR    S S   P  +F  ++++ 
Sbjct: 62  VELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGS---PVDVFAYNTLVA 118

Query: 185 SY----------RMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
            Y          R+  S P+  D      L +    R +  +A      M   G  P + 
Sbjct: 119 GYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVV 178

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           +    L ++  +   + A+    EMR    +PN+ T N++++  C+ G ++ A ++   +
Sbjct: 179 TYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL 238

Query: 290 ESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
            S G  P   +Y TL+ G C +K    +   F  +MEKN + PN +TF+ LI  FC+ G 
Sbjct: 239 FSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCM-PNEVTFDMLIRFFCRGGM 297

Query: 349 LHEANRIFSEMK----ATNVS-------------------------------PNVVTYNT 373
           +  A ++  +M     ATN +                               P+ ++Y T
Sbjct: 298 VERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTT 357

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ G  +         L +EM+RN    + +T+N  I  LC++G  ++A  L++ + ++ 
Sbjct: 358 VLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHG 417

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
                 TY+AL+ G CV+ + + A +L++SM    C+PN   +  L++  C  E  D AA
Sbjct: 418 CTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAA 474

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E++ EML +   P+ +  + L +     G  + A++L  +M   G  P
Sbjct: 475 ELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTP 522



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 94/204 (46%), Gaps = 2/204 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+ +++  D  ++L   +L+  R C  + + F++L   +  +     A +   QM 
Sbjct: 459 TLLTGLCNAERLDAAAELVAEMLH--RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMM 516

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++G  P + + N     +      + AL     +    +SP+V T + ++    K   +E
Sbjct: 517 EHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVE 576

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++F   + +G  P    YN ++ G C +  +  A+ F   M  NG  PN  T+  LI
Sbjct: 577 EAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILI 636

Query: 341 FGFCKKGKLHEANRIFSEMKATNV 364
            G  ++G L EA  + S + +  V
Sbjct: 637 EGLAREGLLKEAQDLLSMLCSRGV 660


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 212/463 (45%), Gaps = 52/463 (11%)

Query: 112 VLLKVQKDYVLS--LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS 169
           VL +++ D  LS  L FF+ +        T  T+ +++  L +  +    + IL+  +  
Sbjct: 44  VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQ-MKM 102

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D  +    LF  I+  Y+   S+                   A   F ++ ++G  P + 
Sbjct: 103 DGINCCEDLFICIINGYKRVGSA-----------------EQALKMFYRIGEFGCKPTVR 145

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
             N  L +LL   +  +    Y  M+++ + PNV+T N+++ A CK   ++ A ++F  M
Sbjct: 146 IYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEM 205

Query: 290 ESMG------------------------------FIPSVTTYNTLISGHCNKGLLSLAMK 319
            + G                              F PSV  YN LI G C +G + +A+K
Sbjct: 206 SNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIK 265

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M  NG+ PNV++++ +I   C  G +  A  +F++M       N+ T+  LI G  
Sbjct: 266 LLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCF 325

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G       L++ M+++G + +++ YN LI GLC  G  ++A  +   + ++  +PN +
Sbjct: 326 MRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVT 385

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS LI G     +   A + +  MI  GCRPN   +  ++   C+N  FD+A  ++ +M
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM 445

Query: 500 -LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            LE C  P+++  +    GL   G+ E AMKL  +M+  G LP
Sbjct: 446 TLEGC-TPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLP 487



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 7/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ +  +D  D   KLF  +  S + C    + +  +  +     K  +A +   +   
Sbjct: 185 LLKALCKNDRVDAAHKLF--VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR--- 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             F P +   N  +  +    R+++A+    EM  N + PNV + + ++++ C  G +E 
Sbjct: 240 --FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVEL 297

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F  M   G   ++ T+  LI G   +G L  A+    LM ++G +PNV+ +NTLI 
Sbjct: 298 AFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIH 357

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  G L EA ++  +M+ +   PNV TY+ LI+G+ + G+    +  +  M+ +G + 
Sbjct: 358 GLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRP 417

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TY  ++  LCK     +A  LV+ +      PN  T++  I G C     E A +L 
Sbjct: 418 NVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLL 477

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC PN   +  L+    +   ++ A  +  E+  + + P+ +  + +  G    
Sbjct: 478 ERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRA 537

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G    A++LF K  +RG  P
Sbjct: 538 GMMGEALQLFGKALVRGTAP 557



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 158/362 (43%), Gaps = 38/362 (10%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S   I+  +  S + +L   LF  +    R CD++   F  L K    R K   A D + 
Sbjct: 281 SYSCIINSLCVSGNVELAFALFAQMFL--RGCDANIHTFTPLIKGCFMRGKLYEALDLWK 338

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P + + N  +  L  +  ++ AL    +M+R+   PNV T ++++  F K G
Sbjct: 339 LMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSG 398

Query: 278 IIERAVEVFKNMESMGFIPSVTTY-----------------------------------N 302
            +  A E +  M S G  P+V TY                                   N
Sbjct: 399 DLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFN 458

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T I G C  G +  AMK    M+ +G  PN+ T+N L+    +  K  EA  +F E++A 
Sbjct: 459 TFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEAR 518

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           N+ PN+VTYNT++ G+ + G       L+ + L  G   D +TYN +I   CK+GK K A
Sbjct: 519 NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIA 578

Query: 423 AYLVKDLDK-NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A LV+ +       P+  TY++LI G C   N E A       I  G  PN   +  L+ 
Sbjct: 579 AQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638

Query: 482 TF 483
            F
Sbjct: 639 CF 640



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 188/406 (46%), Gaps = 14/406 (3%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILYSYRM 188
           T++I+L  L KN +  ++  +   + +               S     K+ D+   + R 
Sbjct: 181 TYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF 240

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
             S P V++ L        +   A     +M D G  P + S +  ++SL  S  V++A 
Sbjct: 241 KPSVP-VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M       N++T   ++      G +  A++++K M   G  P+V  YNTLI G 
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G L  A++  + M+++G  PNV T++ LI GF K G L  A+  ++ M +    PNV
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  +++   +    +   SL E+M   G   + +T+N  I GLC  G+ + A  L++ 
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +  +  +PN +TY+ L+         E AF L++ +     +PN   +  ++  F +   
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              A ++  + L +  APDSI  + +       GK ++A +L  ++
Sbjct: 540 MGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 220/462 (47%), Gaps = 8/462 (1%)

Query: 78  DLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSS 137
           DL F ++  SH    D++ L  +   +   R + V L  +K++++   F  + + H P  
Sbjct: 61  DLSFYSLIESHASSLDFRSLEEVLHQMK--RERRVFL--EKNFIVM--FKAYGKAHLPEK 114

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM-CDSSPLVF 196
                H +      K +  KS  S+L  I+    F+   + ++ ++ S  +    + L F
Sbjct: 115 AVDLFHRMWGEFQCK-QTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTF 173

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +L+ K          A + F ++      P   + +  +  L   ER+D A+    EM+ 
Sbjct: 174 NLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQV 233

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               PN+   N+++ A CK G + RA ++  NM   G +P+  TYN L+ G C KG L  
Sbjct: 234 EGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEK 293

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+   N M  N   PN +TF TLI GF  +G+  +  R+   ++A     N   Y++LI+
Sbjct: 294 AVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLIS 353

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G       L++EM+  G   + + Y+ALI GLC+EGK  +A   + ++     +P
Sbjct: 354 GLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLP 413

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N+ TYS+L+ G     +S +A  ++K M  + C  N+  + +L++  C++  F  A  V 
Sbjct: 414 NSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVW 473

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            +ML + +  D +  S +  G  +    E  +KLF +M  +G
Sbjct: 474 KQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQG 515



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 6/421 (1%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI- 182
           L F++ +++H  SSL   +   VLH + + R+    ++ +          LP K  D   
Sbjct: 62  LSFYSLIESH-ASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFH 120

Query: 183 -LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM---RDYGFLPIIESCNKFLSSL 238
            ++    C  +   F+ +         F  A + +  +   +     P   + N  + ++
Sbjct: 121 RMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAM 180

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                VD A+  ++E+     +P+ YT + +MH  CK   I+ AV +   M+  G  P++
Sbjct: 181 CRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNL 240

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
             +N LIS  C KG L  A K  + M   G  PN +T+N L+ G C KGKL +A  + ++
Sbjct: 241 VAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQ 300

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M +    PN VT+ TLING+   G +  G  +   +   G + +   Y++LI GLCKEGK
Sbjct: 301 MVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGK 360

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  L K++      PN   YSALI G C     + A      M   G  PN   +  
Sbjct: 361 FNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSS 420

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           LM  + +  D  +A  V  EM       + +  S L +GL   GK   A+ ++++M  RG
Sbjct: 421 LMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG 480

Query: 539 L 539
           +
Sbjct: 481 I 481



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 186/370 (50%), Gaps = 19/370 (5%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR-------DYGFLPIIESCNKFLSS 237
           SY++ D   L F  L +++A    FR+  +   QM+       +  F+ + ++  K   +
Sbjct: 56  SYKLGD---LSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGK---A 109

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM---ESMGF 294
            L  + VD+   F++     +    V + N V++   + G+  RA+E + ++   +S+  
Sbjct: 110 HLPEKAVDL---FHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNI 166

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+  T+N +I   C  GL+  A++    +      P+  T++TL+ G CK+ ++ EA  
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVS 226

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  EM+     PN+V +N LI+   + G+    A L + M   G   + +TYNAL+ GLC
Sbjct: 227 LLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC 286

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            +GK +KA  L+  +  N  VPN  T+  LI G  ++  +    ++  S+   G R N++
Sbjct: 287 LKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEY 346

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ++  L+S  C+   F++A E+  EM+ K   P++I+ S L  GL   GK + A     +M
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406

Query: 535 EIRGLLPKGF 544
           + +G LP  F
Sbjct: 407 KNKGYLPNSF 416



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 195/443 (44%), Gaps = 43/443 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S ++H L K  +   + S+L  +    +F                   + + F++L  
Sbjct: 207 TYSTLMHGLCKEERIDEAVSLLDEMQVEGTF------------------PNLVAFNVLIS 248

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A      M   G +P   + N  +  L    +++ A+    +M  N+  P
Sbjct: 249 ALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVP 308

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  T   +++ F   G       V  ++E+ G   +   Y++LISG C +G  + AM+  
Sbjct: 309 NDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELW 368

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   G  PN I ++ LI G C++GKL EA    SEMK     PN  TY++L+ GY + 
Sbjct: 369 KEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEA 428

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+S     +++EM  N    + + Y+ LI GLCK+GK  +A  + K +    +  +   Y
Sbjct: 429 GDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAY 488

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           S++I G C     E+  +L+  M+  G   +P+   + +L++ FC  +   RA ++L  M
Sbjct: 489 SSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIM 548

Query: 500 LEKCMAPD----SIILSELYSGLH--HCGK---DELAMKLFRKMEIRG------------ 538
           L++   PD     I L  L   ++    G+   DEL ++L ++    G            
Sbjct: 549 LDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKF 608

Query: 539 LLPKGFDKLRTIN--CAPENGEK 559
           LLPK       +   C P+N  K
Sbjct: 609 LLPKASTWAMVVQQVCKPKNVRK 631



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 23/286 (8%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  L        KF  A + + +M   G  P     +  +  L    ++D A GF  EM
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +     PN +T + +M  + + G   +A+ V+K M +   I +   Y+ LI+G C  G  
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKF 466

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM--KATNVSPNVVTYN 372
             A+     M   GI+ +V+ ++++I GFC    + +  ++F++M  +   V P+V+TYN
Sbjct: 467 MEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYN 526

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILT---------------------YNALIL 411
            L+N +    +      +   ML  G   D +T                      + L++
Sbjct: 527 ILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVV 586

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            L K  +T  A+ +++ +    L+P AST++ ++   C  KN  +A
Sbjct: 587 RLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKA 632


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 167/329 (50%), Gaps = 1/329 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F++L + +    +  +A   F +MR     P + + N  +S +  +  +D   G YKEM
Sbjct: 188 LFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLISGMCRARDLDAVDGLYKEM 246

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+VYT   ++  FC+ G +E AV++F  M   G  P+   + TLI  HC +G +
Sbjct: 247 SDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNV 306

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +  M     M   G+ P+++ +N L+ G C+   L  A  I  EMK   + P+ VTY TL
Sbjct: 307 NAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTL 366

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  + G  +M   + ++M    + +D +TY ALI GL K G+   A  +++++ + +L
Sbjct: 367 IDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAAL 426

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+ +TY+ +I   C + + +  F+L K M   G +P    + ++M+  C+      A  
Sbjct: 427 EPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADM 486

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +L  ML   ++PD I  + L  G    GK
Sbjct: 487 LLHAMLNIGVSPDDITYNILLDGQCKHGK 515



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 157/326 (48%), Gaps = 1/326 (0%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + Q+ D G  P     N  +   +    +  A   + EMRR+ + P V T N ++   C+
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCR 232

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              ++    ++K M  +G  P V TY  LI G C  G +  A+K  N M   G+ PN + 
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F TLI   CK+G ++    ++ +M+   V P++V YN L+NG  +  N +   S+ EEM 
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+K D +TY  LI G CK+GK   A  + + + +  +  +  TY+ALI+G        
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++ + M+ +   P+   + M++  FC+  D     ++L EM  K   P  +  + + 
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIM 472

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +GL   G+ + A  L   M   G+ P
Sbjct: 473 NGLCKLGQMKNADMLLHAMLNIGVSP 498



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 184/420 (43%), Gaps = 16/420 (3%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           L P     VLL +++   L     + + +  PS  T E ++  L +L       + E+ L
Sbjct: 134 LLPDACSLVLLALRRGISLPAPVCSGLMSRLPS--TPEAYTFYLQLLDAG---MAPETRL 188

Query: 164 RGILDSDSFDL-----PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
             +L  D   L       K+FD +    R    + + F+ L       +        + +
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEM---RRSVQPTVVTFNTLISGMCRARDLDAVDGLYKE 245

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D G  P + +    +     + R++ A+  + EMR   ++PN      ++ A CK G 
Sbjct: 246 MSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGN 305

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +   ++++++M   G +P +  YN L++G C    L  A      M+  G++P+ +T+ T
Sbjct: 306 VNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTT 365

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK GKL  A  I  +M    VS + VTY  LI+G  + G       +  EM+   
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++ D  TY  +I   C++G  K    L+K++      P   TY+ ++ G C     + A 
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L  +M+  G  P+   + +L+   C++     + E  LE   K M PD  + + L S L
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE--LES-SKGMVPDFAVYTSLISEL 542



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 130/270 (48%), Gaps = 1/270 (0%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P    +N L+      G L  A K  + M ++ +QP V+TFNTLI G C+   L   
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCRARDLDAV 239

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           + ++ EM    V P+V TY  LI G+ + G  E    ++ EM   G+  + + +  LI  
Sbjct: 240 DGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDA 299

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CKEG       L +D+    ++P+   Y+AL+ G C  +N + A  + + M  +G +P+
Sbjct: 300 HCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPD 359

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           K  +  L+   C++   D A ++  +M EK ++ D +  + L SGL   G+   A ++ R
Sbjct: 360 KVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLR 419

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +M    L P        I+     G+ ++G
Sbjct: 420 EMMEAALEPDNTTYTMVIDAFCRKGDVKTG 449


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 175/367 (47%), Gaps = 10/367 (2%)

Query: 179 FDSILYSYRMCDSSP--------LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
            D+ L+  R+    P        + +  L +     ++   A      M+D G  P + +
Sbjct: 72  LDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVT 131

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
               +  L D+  VD A+    EM  + I PNV   + ++H +CK G  E   +VF+ M 
Sbjct: 132 YGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMS 191

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P V  Y  LI   C  G +  A +  ++M + G++PNV+T+N LI   CK+G + 
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNA 408
           EA  +   M    V P+VVTYNTLI G   V   +   +L EEM++   +V  D++T+N+
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS 311

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I GLCK G  ++A  +   + +N    N   ++ LI G       ++A +L   M  SG
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +P+   + +L++ FC+    +RA   L EM  + M P+ +    L   +   G    A 
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQAR 431

Query: 529 KLFRKME 535
            LF +M+
Sbjct: 432 DLFNEMD 438



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 161/320 (50%), Gaps = 5/320 (1%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRN-RIS--PNVYTLNMVMHAFCKLGIIERAVEVF 286
           S N  L++L     +D AL   + M    R++  PN  +   +M A C      +AV + 
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLL 117

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           ++M+  G  P V TY TLI G C+   +  A++  N M ++GI+PNV+ ++ L+ G+CK 
Sbjct: 118 RSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKT 177

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G+     ++F EM    + P+VV Y  LI+   + G  +  A + + M   G++ +++TY
Sbjct: 178 GRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N LI  +CKEG  ++A  L K++ +  + P+  TY+ LITG       + A  L + M++
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297

Query: 467 --SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
             +  RP+   F  ++   C+     +A +V   M E     + +  + L  GL    K 
Sbjct: 298 GETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKV 357

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
           + AM+L  +M   GL P  F
Sbjct: 358 KKAMELMDEMASSGLQPDSF 377



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 193/442 (43%), Gaps = 50/442 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D+   D   +L +       MC+S      +V+  L   Y    ++ +    F
Sbjct: 134 TLIRGLCDAADVDTAVELLNE------MCESGIEPNVVVYSCLLHGYCKTGRWESVGKVF 187

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P +      + SL    +V  A      M    + PNV T N+++++ CK 
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISG----------------------------- 307
           G +  A+++ KNM   G  P V TYNTLI+G                             
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLM 307

Query: 308 ------H--CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
                 H  C  G +  A++ + +M +NG + N++ FN LI G  +  K+ +A  +  EM
Sbjct: 308 TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            ++ + P+  TY+ LING+ ++   E   S   EM   G++ + + Y  L+  +C +G  
Sbjct: 368 ASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L  ++D+N  + +A+ YS +I G       + A +  K MI  G  P+   + + 
Sbjct: 428 GQARDLFNEMDRNCKL-DAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIP 486

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR-- 537
           ++ F ++ D   A  VL +M      PD  +   L  G    G  E  ++L R+M  +  
Sbjct: 487 INMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDV 546

Query: 538 GLLPKGFDKLRTINCAPENGEK 559
            L PK    + T   A   G+K
Sbjct: 547 ALDPKIISTIVTSLGASIEGQK 568



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 3/213 (1%)

Query: 332 NVITFNTLIFGFCKKGKLHEA---NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           + +++NT++   C++G L  A    R+ S        PN ++Y TL+        +    
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L   M   G++ D++TY  LI GLC       A  L+ ++ ++ + PN   YS L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     E   ++++ M   G  P+  ++  L+ + C++    +AA V+  M E+ + P+ 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  + L + +   G    A+ L + M  +G+ P
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQP 267


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 215/467 (46%), Gaps = 54/467 (11%)

Query: 113 LLKVQKDYVLSLEFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDS 171
           ++  Q++  L+L+ F +  ++H   +   +T+  +L  L++ R F   ES++  + +S  
Sbjct: 53  MITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS-- 110

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
                       Y    C  + L  DLL + Y    ++ ++   F ++ D+G    + S 
Sbjct: 111 ------------YPPIKCGEN-LFIDLL-RNYGLAGRYESSMRIFLRIPDFGVKRSVRSL 156

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  L+ L+ ++R D+    +K  + +  I+PN++T N+++ A CK   IE A +V   + 
Sbjct: 157 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 216

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           +MG +P++ TY T++ G+  +G +  A +    M   G  P+ IT+  L+ G+CK G+  
Sbjct: 217 AMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFS 276

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGY------GQVGN--SEM---------------- 386
           EA  +  +M+   + PN VTY  +I         G+  N   EM                
Sbjct: 277 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVI 336

Query: 387 -----------GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                         L+ +ML+N    D    + LI  LCKEG+  +A  L  + DK S +
Sbjct: 337 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGS-I 395

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI G C +     A +L+  M    C+PN   + +L+    +N +      V
Sbjct: 396 PSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 455

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           L EMLE    P+      L+ GL   GK+E A+K+     + G + K
Sbjct: 456 LEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSMAVMNGKVDK 502



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 137/288 (47%), Gaps = 2/288 (0%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVIT 335
           G  E ++ +F  +   G   SV + NTL++         L    FKN  E  GI PN+ T
Sbjct: 132 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 191

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            N L+   CKK  +  A ++  E+ A  + PN+VTY T++ GY   G+ E    + EEML
Sbjct: 192 CNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 251

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G   D +TY  L+ G CK G+  +AA ++ D++KN + PN  TY  +I   C  K S 
Sbjct: 252 DRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 311

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  ++  M+     P+  +   ++   C++   D A  +  +ML+    PD+ +LS L 
Sbjct: 312 EARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 371

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             L   G+   A KLF + + +G +P        I    E GE    G
Sbjct: 372 HWLCKEGRVSEARKLFDEFD-KGSIPSLLTYNTLIAGMCEKGELTEAG 418


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 189/381 (49%), Gaps = 2/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G ++  S +   ++   ++ +   C  + +  ++L   Y    +  +A     +  
Sbjct: 235 TLMQGFIEEGSIEAALRVKTKMMETG--CSPTRVTVNVLINGYCKMGRVEDALGYIQKEI 292

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P   + N F+  L  +  V  AL     M +    P+V+T N V++   K G ++
Sbjct: 293 ADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 352

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M   G +P  TT+NTLI   C++  L  A+     +   G+ P+V TFN LI
Sbjct: 353 EAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILI 412

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G  H   R+F EMK++  +P+ VTYN LI+    +G       L +EM  NG  
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
              +TYN +I  LCK+ + ++A  +   +D + +  +A T++ LI G C  K  + A +L
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M++ G +P+   +  +++ +C+  D  +AA++L  M       D +    L +GL  
Sbjct: 533 IEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCK 592

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+ ++A+KL R M I+G+ P
Sbjct: 593 AGRTQVALKLLRGMRIKGIRP 613



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 176/354 (49%), Gaps = 1/354 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D     ++ +    +   +   A     QM D G LP   + N  + +L    R++ AL 
Sbjct: 332 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALD 391

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             +E+    +SP+VYT N++++A CK+G     + +F+ M+S G  P   TYN LI   C
Sbjct: 392 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           + G L  A+     ME NG   + +T+NT+I   CK+ ++ EA  +F +M A  +S + V
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NTLI+G  +    +    L E+M++ G++   +TYN+++   CK+G  KKAA +++ +
Sbjct: 512 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETM 571

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             N    +  TY  LI G C    ++ A +L + M   G RP    +  ++ +  +  + 
Sbjct: 572 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 631

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD-ELAMKLFRKMEIRGLLPK 542
             A  +  EM E    PD++    ++ GL   G   + A     +M  +G +P+
Sbjct: 632 RDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPE 685



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 203/428 (47%), Gaps = 33/428 (7%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T  T   V++ L+KN +   ++ I+  ++D                  R C 
Sbjct: 329 EGHDPDVFTYNT---VINCLSKNGELDEAKGIVNQMVD------------------RGCL 367

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L      + +   A D   ++   G  P + + N  +++L       + +  
Sbjct: 368 PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 427

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N+++   C +G +  A+++ K MES G   S  TYNT+I   C 
Sbjct: 428 FEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCK 487

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +  +  A +  + M+ +GI  + +TFNTLI G CK  ++ +A  +  +M    + P+ +T
Sbjct: 488 QMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNIT 547

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + G+ +  A + E M  NG ++D++TY  LI GLCK G+T+ A  L++ + 
Sbjct: 548 YNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 607

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ +I     R N   A  L++ M   G  P+   ++++    C+     
Sbjct: 608 IKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPI 667

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL---AMKL------FRKMEIRGLL 540
             A + L+EM+ K   P+      L  GL + G D+    A++L      FR+ ++  + 
Sbjct: 668 KEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDVSAI- 726

Query: 541 PKGFDKLR 548
            +G+ K+R
Sbjct: 727 -RGYLKIR 733



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 176/380 (46%), Gaps = 3/380 (0%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF-CQ 218
           E I++ +  + +FDL   L   +       ++   V     ++YA  ++F +A D    Q
Sbjct: 93  EEIIQKLGTAGAFDLMEGLVREMRREGH--EAGAGVVRSFVESYARLRRFDDAVDLVRNQ 150

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +  +G        N  L+ L +  R+ +    Y EM    I P+V TLN ++ A C+   
Sbjct: 151 LNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQ 210

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  AV + + M S    P  TT+ TL+ G   +G +  A++ K  M + G  P  +T N 
Sbjct: 211 VRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNV 270

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+CK G++ +A     +  A    P+ VTYNT ++   Q G+      + + ML+ G
Sbjct: 271 LINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D+ TYN +I  L K G+  +A  +V  +     +P+ +T++ LI   C +   E A 
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L + +   G  P+ + F +L++  C+  D      +  EM     APD +  + L   L
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450

Query: 519 HHCGKDELAMKLFRKMEIRG 538
              GK   A+ L ++ME  G
Sbjct: 451 CSMGKLVNALDLLKEMESNG 470



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 163/345 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V++ L    A   + +     + +M D G  P + + N  + +L  + +V  A+   +EM
Sbjct: 162 VYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 221

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             + ++P+  T   +M  F + G IE A+ V   M   G  P+  T N LI+G+C  G +
Sbjct: 222 SSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRV 281

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+ +      +G +P+ +T+NT +   C+ G +  A ++   M      P+V TYNT+
Sbjct: 282 EDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           IN   + G  +    +  +M+  G   D  T+N LI+ LC + + ++A  L ++L    L
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGL 401

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  T++ LI   C   +     +L++ M  SGC P++  + +L+   C       A +
Sbjct: 402 SPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +L EM        ++  + +   L    + E A ++F +M+  G+
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 123/259 (47%), Gaps = 4/259 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M   G  P V T NTLI   C    +  A+     M  + + P+  TF TL+ GF 
Sbjct: 182 VYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFI 241

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +  A R+ ++M  T  SP  VT N LINGY ++G  E      ++ + +G + D +
Sbjct: 242 EEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQV 301

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE--RAFQLYK 462
           TYN  +  LC+ G    A  ++  + +    P+  TY+ +I   C+ KN E   A  +  
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI--NCLSKNGELDEAKGIVN 359

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC P+   F  L+   C     + A ++  E+  K ++PD    + L + L   G
Sbjct: 360 QMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVG 419

Query: 523 KDELAMKLFRKMEIRGLLP 541
              L ++LF +M+  G  P
Sbjct: 420 DPHLGIRLFEEMKSSGCAP 438



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 3/320 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P      + +  L  +   D+  G  +EMRR         +   + ++ +L   + AV
Sbjct: 85  FAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDAV 144

Query: 284 EVFKN-MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++ +N + + G       YN L++       + L     N M   GIQP+V+T NTLI  
Sbjct: 145 DLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKA 204

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+  ++  A  +  EM +  V+P+  T+ TL+ G+ + G+ E    +  +M+  G    
Sbjct: 205 LCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPT 264

Query: 403 ILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            +T N LI G CK G+ + A  Y+ K++  +   P+  TY+  +   C   +   A ++ 
Sbjct: 265 RVTVNVLINGYCKMGRVEDALGYIQKEI-ADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++ G  P+   +  +++   +N + D A  ++ +M+++   PD+   + L   L   
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383

Query: 522 GKDELAMKLFRKMEIRGLLP 541
            + E A+ L R++ ++GL P
Sbjct: 384 NRLEEALDLARELTVKGLSP 403


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 205/427 (48%), Gaps = 6/427 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-SDSFDLPSKLFDS 181
           +L FF W+        T ++H+ +LH+L++ R     E ++  +L+ SD+ +      D+
Sbjct: 73  ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132

Query: 182 ILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           I    R   +    SP  ++   ++ A           + Q+   G LP   + N  + S
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS 192

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                 +  A  +++ +    + P  +T N ++  +C+ G + +A  +F  M  MG   +
Sbjct: 193 YCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN 252

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             +Y  LI G C+   +  A+    +M+++G  PNV  F  LI G CK G++ +A  +F 
Sbjct: 253 EYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD 312

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    V P+V+TYN +I GY ++G       + E M +NG   D  TYN LI GLC + 
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ- 371

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           KT++A  L+ +  K    P   T++ LI G C+ +  + A ++   M+ S C+ +  +F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+++  + +    A E+L E+    + P+ I  + +  G    GK ++A+++ + ME  
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 538 GLLPKGF 544
           G  P  +
Sbjct: 492 GCQPNAW 498



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 179/397 (45%), Gaps = 79/397 (19%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           CQ  +Y +  +I+        L D++ V  AL  +  M+R+  SPNV     ++   CK 
Sbjct: 249 CQRNEYSYTILIQG-------LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 301

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN---- 332
           G +  A  +F  M   G +PSV TYN +I G+   G ++ A+K K LMEKNG  P+    
Sbjct: 302 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTY 361

Query: 333 ------------------------------VITFNTLIFGFC------------------ 344
                                         V+TF  LI G+C                  
Sbjct: 362 NTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 421

Query: 345 -----------------KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                            KK +L EA  + +E+ A  + PNV+TY ++I+GY + G  ++ 
Sbjct: 422 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 481

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + + M R+G + +  TYN+L+ GL K+ K  KA  L+  + K+ ++PN  TY+ L+ G
Sbjct: 482 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 541

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           QC   + + AF+L++ M ++G +P++H + +L    C+     RA E    ++ K +A  
Sbjct: 542 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALT 598

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + L  G    G  + A  L  +M   G  P  +
Sbjct: 599 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 182/374 (48%), Gaps = 5/374 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   ++ FD   ++ + ++ S   C     VF  L  +   + + + A +   ++ 
Sbjct: 397 NLINGYCMAEKFDDALRMKNKMMSS--KCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    +     S +VDIAL   K M R+   PN +T N +M+   K   + 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +   M+  G IP+V TY TL+ G C++     A +   +ME+NG++P+   +  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G+  EA   +S +    V+   V Y TLI+G+ + GN++  A+L E M+  G  
Sbjct: 575 DALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY+ L+  LCK+ +  +A  ++  +    +      Y+ LI         + A ++
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y  M  SG +P+   + + ++++C+    + A +++L+M  + +APD +  + L  G  H
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 521 CGKDELAMKLFRKM 534
            G  + A    ++M
Sbjct: 752 MGYIDRAFSTLKRM 765



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 16/336 (4%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D G  P   + +  L +L   +R++ AL    +M    I   ++   +++    + G
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A  ++  M S G  PS TTY   I+ +C +G L  A      ME+ G+ P+V+T+N
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI----------------NGYGQV 381
            LI G    G +  A      M   +  PN  TY  L+                +G   +
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              ++   L E M+++G+   + TY++LI G CK G+ ++A  L+  +    L PN   Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI   C  K  E+A      M   G +P    + +L+   C   DF++   +  ++LE
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
                D +    L  GL   G  ++  ++   ME R
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 21/397 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G   S   D+  ++    +     C  +   ++ L       KK   A     +M+
Sbjct: 467 SIIDGYCKSGKVDIALEVLK--MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    L    D    D A   ++ M +N + P+ +   ++  A CK G   
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 581

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA E +  +   G   +   Y TLI G    G    A      M   G  P+  T++ L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK+ +L+EA  I  +M    +   +  Y  LI+   + G  +    +Y EM  +G K
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TY   I   CKEG+ + A  L+  +++  + P+  TY+ LI G       +RAF  
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE----------------DFDRAAEVLLEMLEKCM 504
            K M+ + C PN   + +L+    +                  + D   ++L  M++  +
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P     S L +G    G+ E A  L   M  +GL P
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 858



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 51/292 (17%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      + +L      +K+   A     QM   G    I +    +  +L   + D A 
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG- 307
             Y EM  +   P+  T  + ++++CK G +E A ++   ME  G  P V TYN LI G 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 308 ---------------------------------HCNKG---------------LLSLAMK 319
                                            H  KG               L+ L + 
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 320 FKNL--MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ L  M K+G+ P V T+++LI GFCK G+L EA  +   M    +SPN   Y  LI  
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                  E   S    M   G +  + +Y  L++GLC EG  +K   L  DL
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 38/342 (11%)

Query: 142 THSIVLHILTKNRKFKSSESIL-----RGI--------------LDSDSFDLPSKLFDSI 182
           T+S++LH L K ++   +  IL     RGI              L     D   ++++ +
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
             S      S   + +   +Y    +  +A D   +M   G  P + + N  +       
Sbjct: 696 TSSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK--------------LGIIERAV--EVF 286
            +D A    K M      PN +T  +++    K                +IE  +  ++ 
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M   G  P+VTTY++LI+G C  G L  A    + M   G+ PN   +  LI   C  
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
               +A    S M      P + +Y  L+ G    G+ E   SL+ ++L  G   D + +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
             L  GL K G       ++  ++K     ++ TY AL+T +
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY-ALVTNK 974


>gi|186478651|ref|NP_173362.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806505|sp|Q9LN69.2|PPR50_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g19290
 gi|332191705|gb|AEE29826.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 904

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 141/537 (26%), Positives = 249/537 (46%), Gaps = 23/537 (4%)

Query: 31  FRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLI 90
            RR    V      P     S SE S  + R       R  PE        +      L+
Sbjct: 2   LRRSPARVVAYQLLPFLYTRSFSEASRTLRRELRGGNGRIRPE-------LLERVSRLLV 54

Query: 91  HSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
              ++ L  LS   +   +  +L +++ +    LE F      +      + +  ++HIL
Sbjct: 55  LGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHIL 114

Query: 151 TKNRKFKSSESILRGI--LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
           ++ R ++ ++S L  +  L+   F     ++  ++  ++    SP VFD++ K YA +  
Sbjct: 115 SRARNYQQTKSYLCELVALNHSGF----VVWGELVRVFKEFSFSPTVFDMILKVYAEKGL 170

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
            +NA   F  M +YG +P + SCN  LS+L+      +AL  Y +M    +SP+V+T ++
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230

Query: 269 VMHAFCKLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           V++A+C+ G +++A+   K  ES +G   +V TYN+LI+G+   G +    +   LM + 
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  NV+T+ +LI G+CKKG + EA  +F  +K   +  +   Y  L++GY + G     
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +++ M+  G++ +    N+LI G CK G+  +A  +   ++  SL P+  TY+ L+ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A +L   M +    P    + +L+  + +   F     +   ML++ +  D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
            I  S L   L   G    AMKL+  +  RGLL           G  K+  +N A E
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 152/371 (40%), Gaps = 38/371 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y    +   A   F +M D+   P   + N  +     +  VD AL    +M +  
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P V T N+++  + ++G     + ++K M   G      + +TL+      G  + AM
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K    +   G+  + IT N +I G CK  K++EA  I   +      P V TY  L +GY
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +VGN +   ++ E M R GI   I  YN LI G  K     K A LV +L    L P  
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA----- 493
           +TY ALITG C     ++A+     MI  G   N +I   + ++  + +  D A      
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671

Query: 494 -----------EVLLEMLE----------------------KCMAPDSIILSELYSGLHH 520
                      + L E LE                      K + P++I+ +   +GL  
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731

Query: 521 CGKDELAMKLF 531
            GK E A KLF
Sbjct: 732 AGKLEDARKLF 742



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 153/340 (45%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L S R    + + +  L K Y  +     A   F  +++   +         +     + 
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++  A+  +  M    +  N    N +++ +CK G +  A ++F  M      P   TYN
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TL+ G+C  G +  A+K  + M +  + P V+T+N L+ G+ + G  H+   ++  M   
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V+ + ++ +TL+    ++G+      L+E +L  G+  D +T N +I GLCK  K  +A
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             ++ +++     P   TY AL  G     N + AF + + M R G  P   ++  L+S 
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
             +    ++ A++++E+  + + P       L +G  + G
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G L    + N  +S L   E+V+ A      +   R  P V T   + H + K+G ++ A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560

Query: 283 VEVFKNMESMGFIPSVTTYNTLISG-----HCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             V + ME  G  P++  YNTLISG     H NK +  L ++ +      G+ P V T+ 
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK-VADLVIELR----ARGLTPTVATYG 615

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNV--------------------------VTY 371
            LI G+C  G + +A     EM    ++ NV                          V +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675

Query: 372 NTLINGYGQV-------GNSEMGASLYEEMLRNGIKVDILT-----YNALILGLCKEGKT 419
           + L+ GY  +         + +      E + N     +L      YN  I GLCK GK 
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKL 735

Query: 420 KKAAYLVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           + A  L  DL   +  +P+  TY+ LI G  +  +  +AF L   M   G  PN   +  
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+   C+  + DRA  +L ++ +K + P++I  + L  GL   G    AM+L  KM  +G
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855

Query: 539 LLPKGFDKLRTINCAPE 555
           L+ +G DK   ++   E
Sbjct: 856 LV-RGSDKQGDVDIPKE 871



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 41/290 (14%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P IE  N  +S       ++       E+R   ++P V T   ++  +C +G+
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626

Query: 279 IERAVEVFKNMESMG--------------------------FIPSVTTYNTLISGH---- 308
           I++A      M   G                           +  +  ++ L+ G+    
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686

Query: 309 ---------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
                    C K    +A   +N   K  + PN I +N  I G CK GKL +A ++FS++
Sbjct: 687 EFLEASATTCLK-TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745

Query: 360 KATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
            +++   P+  TY  LI+G    G+     +L +EM   GI  +I+TYNALI GLCK G 
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
             +A  L+  L +  + PNA TY+ LI G     N   A +L + MI  G
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 4/228 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA-LGFYKEMRRNRISPNVYTLNMVM 270
           A  T  +M + G    +  C+K  +SL   +++D A L   K +  + + P   +L   +
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689

Query: 271 HAFCKLGI-IERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKN 327
            A     +  ++  E  +N       +P+   YN  I+G C  G L  A K F +L+  +
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
              P+  T+  LI G    G +++A  +  EM    + PN+VTYN LI G  ++GN +  
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             L  ++ + GI  + +TYN LI GL K G   +A  L + + +  LV
Sbjct: 810 QRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 177/354 (50%), Gaps = 1/354 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D     ++ +    +   +   A     QM D G LP   + N  + +L    R++ AL 
Sbjct: 334 DPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALD 393

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             +E+    +SP+VYT N++++A CK+G     + +F+ M+S G  P   TYN LI   C
Sbjct: 394 LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLC 453

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           + G L  A+   N ME NG   + +T+NT+I   CKK ++ EA  +F +M A  +S + V
Sbjct: 454 SMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAV 513

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NTLI+G  +    +    L E+M++ G++ + +TYN+++   CK+G  KKAA +++ +
Sbjct: 514 TFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETM 573

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             N    +  TY  LI G C    ++ A +L + M   G RP    +  ++ +  +  + 
Sbjct: 574 TANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNL 633

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGL-HHCGKDELAMKLFRKMEIRGLLPK 542
             A  +  EM E    PD++    ++  L    G  + A     +M  +G +P+
Sbjct: 634 RDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPE 687



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 190/384 (49%), Gaps = 8/384 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G ++  S +   ++   ++ +   C  + +  ++L   Y    +  +A     Q  
Sbjct: 237 TLMQGFIEEGSIEAALRVKAKMMEAG--CSPTGVTVNVLINGYCKMGRVEDALGYIQQEI 294

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P   + N F+  L  +  V  AL     M +    P+V+T N V++   K G ++
Sbjct: 295 ADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELD 354

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M   G +P  TT+NTLI    ++  L  A+     +   G+ P+V TFN LI
Sbjct: 355 EAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILI 414

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN---GYGQVGNSEMGASLYEEMLRN 397
              CK G  H   R+F EMK++  +P+ VTYN LI+     G++GN+     L  EM  N
Sbjct: 415 NALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA---LDLLNEMESN 471

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G     +TYN +I  LCK+ + ++A  +   +D   +  +A T++ LI G C  K  + A
Sbjct: 472 GCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDA 531

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L + M++ G +PN   +  +++ +C+  +  +AA++L  M       D +    L +G
Sbjct: 532 TELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLING 591

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ ++A+KL R M I+G+ P
Sbjct: 592 LCKAGRTQVALKLLRGMRIKGIRP 615



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 204/434 (47%), Gaps = 36/434 (8%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           + H P   T  T   V++ L+KN +   ++ I+  ++D                  R C 
Sbjct: 331 EGHDPDVFTYNT---VINCLSKNGELDEAKGIVNQMVD------------------RGCL 369

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
                F+ L    + + +   A D   ++   G  P + + N  +++L       + +  
Sbjct: 370 PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRL 429

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM+ +  +P+  T N+++   C +G +  A+++   MES G   S  TYNT+I   C 
Sbjct: 430 FEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCK 489

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K  +  A +  + M+  GI  + +TFNTLI G CK  ++ +A  +  +M    + PN +T
Sbjct: 490 KMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNIT 549

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN+++  Y + GN +  A + E M  NG ++D++TY  LI GLCK G+T+ A  L++ + 
Sbjct: 550 YNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMR 609

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED-F 489
              + P    Y+ +I     R N   A  L++ M   G  P+   ++++  + C+     
Sbjct: 610 IKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPI 669

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL---AMKL------FRKME---IR 537
             A + L+EM+ K   P+      L  GL + G D+    A++L      FR+ +   IR
Sbjct: 670 KEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRESDASAIR 729

Query: 538 GLLP--KGFDKLRT 549
           G L   K +D L T
Sbjct: 730 GYLKIRKYYDALAT 743



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 5/382 (1%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E I++ +  + +FDL   L   +        +  +V     ++YA  ++F +A D     
Sbjct: 93  EEIVQKLGTAGAFDLMEGLVREMRREGHQVRA--VVVRSFVESYARLRRFDDAVDLVLNQ 150

Query: 220 RD---YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            D   +G        N  L+ L++  ++ +    Y EM    I P+V TLN ++ A C+ 
Sbjct: 151 LDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRA 210

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             +  AV + + M S G  P  TT+ TL+ G   +G +  A++ K  M + G  P  +T 
Sbjct: 211 HQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV 270

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G+CK G++ +A     +  A    P+ VTYNT ++G  Q G+      + + ML+
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   D+ TYN +I  L K G+  +A  +V  +     +P+ +T++ LI     +   E 
Sbjct: 331 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEE 390

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L + +   G  P+ + F +L++  C+  D      +  EM      PD +  + L  
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450

Query: 517 GLHHCGKDELAMKLFRKMEIRG 538
            L   GK   A+ L  +ME  G
Sbjct: 451 HLCSMGKLGNALDLLNEMESNG 472



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 147/321 (45%), Gaps = 3/321 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P      + +  L  +   D+  G  +EMRR         +   + ++ +L   + AV
Sbjct: 85  FAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAV 144

Query: 284 EVFKNM---ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           ++  N    ++ G       +N L++       L L     N M   GIQP+V+T NTLI
Sbjct: 145 DLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLI 204

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C+  ++  A  +  EM +  V+P+  T+ TL+ G+ + G+ E    +  +M+  G  
Sbjct: 205 KALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCS 264

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
              +T N LI G CK G+ + A   ++    +   P+  TY+  + G C   +   A ++
Sbjct: 265 PTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKV 324

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M++ G  P+   +  +++   +N + D A  ++ +M+++   PD+   + L   L  
Sbjct: 325 MDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSS 384

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
             + E A+ L R++ ++GL P
Sbjct: 385 QNRLEEALDLARELTVKGLSP 405


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 171/326 (52%), Gaps = 2/326 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D +    R C    + +++L        +   A      M  YG  P + + N  L 
Sbjct: 37  KLLDEM--GSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILR 94

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           S+  + R   A     EM R   SP+V T N++++  C+ G++ RA+++ + M + G  P
Sbjct: 95  SMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTP 154

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  +YN L+ G C +  +  A+++  +M   G  P+++T+NT++   CK GK+  A  + 
Sbjct: 155 NSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELL 214

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +++ +   SP ++TYNT+I+G  +VG ++    L  EM   G+K D++TY++LI GL +E
Sbjct: 215 NQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSRE 274

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           GK ++A     D++   + PNA TY++++ G C  + ++RA      MI  GC+P +  +
Sbjct: 275 GKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSY 334

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +L+           A E+L E+  +
Sbjct: 335 TILIEGIANEGLAKEALELLNELCSR 360



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 167/354 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + + +L +          A     +M   G  P + + N  ++ +    R+D A+
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F   M      PNV T N+++ + C  G    A ++   M   G  PSV T+N LI+  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KGLL  A+     M  +G  PN +++N L+ GFCK+ K+  A +    M +    P++
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNT++    + G  +    L  ++   G    ++TYN +I GL K GKT +A  L+ +
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L P+  TYS+LI G       E A + +  +   G +PN   +  +M   C+ + 
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            DRA + L  M+ K   P  +  + L  G+ + G  + A++L  ++  RG++ K
Sbjct: 312 TDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKK 365



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 145/284 (51%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+V T  +++ A C    + +A+++   M S G  P V TYN L++G C +G L  A+KF
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            N M   G QPNVIT N ++   C  G+  +A ++ +EM     SP+VVT+N LIN   +
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G       + E+M  +G   + L+YN L+ G CKE K  +A   ++ +      P+  T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ ++T  C     + A +L   +   GC P    +  ++    +    D+A E+L EM 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            K + PD I  S L +GL   GK E A+K F  +E  G+ P  F
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAF 297



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 18/304 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  ++                   + C  S + F++L  
Sbjct: 88  THNIILRSMCSTGRWMDAEKLLTEMV------------------RKGCSPSVVTFNILIN 129

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ + + M      P
Sbjct: 130 FLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYP 189

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A++  
Sbjct: 190 DIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELL 249

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G++P+VIT+++LI G  ++GK+ EA + F +++   V PN  TYN+++ G  + 
Sbjct: 250 HEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKA 309

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
             ++        M+  G K   ++Y  LI G+  EG  K+A  L+ +L    +V  +S  
Sbjct: 310 QQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAE 369

Query: 442 SALI 445
             ++
Sbjct: 370 QVVV 373


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 186/379 (49%), Gaps = 5/379 (1%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR ++ +   +   K  +S++Y   + D  P     L + +    K + AT     +   
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTS--LIRGFCRIGKTKKATWVMEILEQS 178

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + + N  +S    S  +D AL   + + R  ++P+V T N ++   C  G +++A
Sbjct: 179 GAVPDVITYNVLISGYCKSGEIDNAL---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQA 235

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +EV          P V TY  LI   C +  +  AMK  + M   G +P+V+T+N LI G
Sbjct: 236 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 295

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G+L EA +  + M +    PNV+T+N ++      G       L  +MLR G    
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+N LI  LC++G   +A  +++ +  +   PN+ +Y+ L+ G C  K  +RA +   
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC P+   +  L++  C++   D A E+L ++  K  +P  I  + +  GL   G
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475

Query: 523 KDELAMKLFRKMEIRGLLP 541
           K E A+KL  +M  +GL P
Sbjct: 476 KTERAIKLLDEMRRKGLKP 494



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 167/315 (53%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L        +   A      M  YG  P + + N  L S+  + R   A     +
Sbjct: 287 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 346

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R   SP+V T N++++  C+ G++ RA+++ + M   G  P+  +YN L+ G C +  
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+++ ++M   G  P+++T+NTL+   CK GK+  A  I +++ +   SP ++TYNT
Sbjct: 407 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 466

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +VG +E    L +EM R G+K DI+TY++L+ GL +EGK  +A     DL+   
Sbjct: 467 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 526

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PNA TY++++ G C  + ++RA      MI   C+P +  + +L+           A 
Sbjct: 527 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 586

Query: 494 EVLLEMLEKCMAPDS 508
           ++L E+  + +   S
Sbjct: 587 DLLNELCSRGLVKKS 601



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 183/382 (47%), Gaps = 2/382 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +ILR + DS       ++ D  L   + C    + + +L +          A     +MR
Sbjct: 221 TILRTLCDSGKLKQAMEVLDRQLQ--KECYPDVITYTILIEATCKESGVGQAMKLLDEMR 278

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + N  ++ +    R+D A+ F   M      PNV T N+++ + C  G   
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  +M   G  PSV T+N LI+  C +GLL  A+     M  +G  PN +++N L+
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK+ K+  A      M +    P++VTYNTL+    + G  ++   +  ++   G  
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 458

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I GL K GKT++A  L+ ++ +  L P+  TYS+L++G       + A + 
Sbjct: 459 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 518

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G RPN   +  +M   C++   DRA + L  M+ K   P     + L  G+ +
Sbjct: 519 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 578

Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
            G  + A+ L  ++  RGL+ K
Sbjct: 579 EGLAKEALDLLNELCSRGLVKK 600



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 3/351 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y    +  NA     +M      P + + N  L +L DS ++  A+     
Sbjct: 185 ITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
             +    P+V T  +++ A CK   + +A+++   M + G  P V TYN LI+G C +G 
Sbjct: 242 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 301

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+KF N M   G QPNVIT N ++   C  G+  +A ++ S+M     SP+VVT+N 
Sbjct: 302 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 361

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   + G       + E+M  +G   + L+YN L+ G CKE K  +A   +  +    
Sbjct: 362 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ L+T  C     + A ++   +   GC P    +  ++    +    +RA 
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++L EM  K + PD I  S L SGL   GK + A+K F  +E  G+ P   
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 532



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  +L                   + C  S + F++L  
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDML------------------RKGCSPSVVTFNILIN 364

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ +   M      P
Sbjct: 365 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 424

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 425 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 484

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P++IT+++L+ G  ++GK+ EA + F +++   + PN +TYN+++ G  + 
Sbjct: 485 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 544

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             ++        M+    K    TY  LI G+  EG  K+A  L+ +L    LV  +S 
Sbjct: 545 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 603


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 172/354 (48%), Gaps = 38/354 (10%)

Query: 226 PIIESCNKFLSSLLDSERV--DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           P +++ N  LS+L  S       +L  ++ +   R+ PN YT N+++H  C  G +  A+
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADAL 230

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI--- 340
                M+  G  P V TYNTL+  HC KG+L  A      M+K GI P   T+NTL+   
Sbjct: 231 STLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAY 290

Query: 341 ------------------FGF--------------CKKGKLHEANRIFSEMKATN-VSPN 367
                             FGF              C+ GK+ EA ++  EM+  + VSP+
Sbjct: 291 ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPD 350

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYNTL++   +   S    +L EEM   G+K  ++T+N ++ GLC+EG+ ++A   +K
Sbjct: 351 VVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLK 410

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +  L P+  TY+ LI   C  +N  +AF L   M+RSG + +      L+   C+ +
Sbjct: 411 MMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEK 470

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++ A E+L    ++   PD +    + +      K E A+ L+ +M  R L P
Sbjct: 471 RYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTP 524



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 180/414 (43%), Gaps = 71/414 (17%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+LL  T+  +    +A  T   M+ +G  P + + N  L +      +  A      M+
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  I+P   T N ++ A+ +LG I++A  V + M + GF P + TYN L +G C  G + 
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 316 LAMKFKNLMEKNGI-QPNVITFNTL----------------------------------- 339
            A K K+ ME   I  P+V+T+NTL                                   
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G C++G+L EA      M    ++P+V+TYNTLI+ Y +  N      L +EM+R+G+
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 400 KVDILTYNALILGLC-----------------------------------KEGKTKKAAY 424
           K+D  T N L+  LC                                   KE K + A Y
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L  ++ K  L P+  TY+ LI G C       A      +++ G  P+   + +++  +C
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYC 572

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D ++A +   +MLE    PD +  + L +GL   GK E A+KLF     +G
Sbjct: 573 KEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKG 626



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 159/337 (47%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  + +    +R   AL   +EMR   +  ++ T N+V+   C+ G +E A+  
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            K M   G  P V TYNTLI  +C    ++ A    + M ++G++ +  T NTL++  CK
Sbjct: 409 LKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 468

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + +  EA  +          P+ V+Y T++  Y +    E    L++EM +  +   I T
Sbjct: 469 EKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYT 528

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLC  GK  +A   + +L K  LVP+ +TY+ +I   C   + E+AFQ +  M+
Sbjct: 529 YNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKML 588

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            +  +P+      LM+  C +   ++A ++     EK    D I  + L   L   G  +
Sbjct: 589 ENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVD 648

Query: 526 LAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            A+  F  ME RGL P  F     ++   E G  E  
Sbjct: 649 TALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEA 685



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 140/263 (53%), Gaps = 3/263 (1%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGII--ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           RR  + P++   N V+ A  +      + +++VF+++ ++   P+  T+N L+  HC+KG
Sbjct: 165 RRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKG 224

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L+ A+   + M+  G+ P+V+T+NTL+   C+KG L EA  + + MK   ++P   TYN
Sbjct: 225 TLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYN 284

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++ Y ++G  +   ++ E M   G + D+ TYN L  GLC+ GK  +A  L  +++  
Sbjct: 285 TLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHL 344

Query: 433 SLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           S+V P+  TY+ L+      + S  A  L + M   G + +     +++   C+    + 
Sbjct: 345 SIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEE 404

Query: 492 AAEVLLEMLEKCMAPDSIILSEL 514
           A   L  M E+ +APD I  + L
Sbjct: 405 ALGRLKMMTEEGLAPDVITYNTL 427



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 170/421 (40%), Gaps = 77/421 (18%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           SD+ +L  ++ D      +   SS +  +++ K      +   A      M + G  P +
Sbjct: 368 SDALNLLEEMRD------KGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDV 421

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            + N  + +   +  V  A     EM R+ +  + +TLN +++  CK    E A E+ ++
Sbjct: 422 ITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRS 481

Query: 289 MESMGFIP-----------------------------------SVTTYNTLISGHCNKGL 313
               GF+P                                   S+ TYNTLI G C  G 
Sbjct: 482 PPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGK 541

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A+   N + K G+ P+  T+N +I  +CK+G L +A +  ++M      P+VVT NT
Sbjct: 542 LTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNT 601

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+NG    G  E    L+E     G KVD++TYN LI  LCK+G    A +   D++   
Sbjct: 602 LMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARG 661

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST----------- 482
           L P+A TY+ +++       SE A  +   +  SG    +  + ++ S+           
Sbjct: 662 LQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPE 721

Query: 483 -------------------------FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                                     C       A  VL EM++K M+ DS     L  G
Sbjct: 722 VKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781

Query: 518 L 518
           L
Sbjct: 782 L 782



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 152/342 (44%), Gaps = 24/342 (7%)

Query: 136 SSLTLETHSI--VLHILTKNRKFKSSESILRG------ILDSDSFDLPSKLF------DS 181
           S L ++T ++  +L+ L K ++++ +E +LR       + D  S+      +      + 
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 182 ILY-----SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
            LY     S R    S   ++ L K      K   A D   ++   G +P   + N  + 
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +      ++ A  F+ +M  N   P+V T N +M+  C  G +E+A+++F++    G   
Sbjct: 570 AYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKV 629

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V TYNTLI   C  G +  A+ F   ME  G+QP+  T+N ++    + G+  EA  + 
Sbjct: 630 DVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689

Query: 357 SEMKATNVSPNVVTYNTLINGYGQV---GNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++  +       +Y  + +   +V    + E+ +    E   N    D  +YN  +  L
Sbjct: 690 HKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDC--ESGGNAKGGDQESYNKSVKEL 747

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           C  G+ K+A  ++ ++ +  +  ++STY  L+ G   R+  +
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQKRQ 789



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 6/188 (3%)

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI----LTYN 407
           A  + S  +  +V P++   N +++   +  ++   ASL  ++ R+ I + +     T+N
Sbjct: 157 AQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASL--DVFRSLIALRLHPNHYTFN 214

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+   C +G    A   +  +    L P+  TY+ L+   C +     A  L   M + 
Sbjct: 215 LLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKE 274

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P +  +  L+S + +     +A  V+  M      PD    + L +GL   GK + A
Sbjct: 275 GIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEA 334

Query: 528 MKLFRKME 535
            KL  +ME
Sbjct: 335 FKLKDEME 342


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/467 (25%), Positives = 210/467 (44%), Gaps = 66/467 (14%)

Query: 114 LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD 173
           LK + + +L+L FF  +        T  T++ ++  L   R     + +L+ ++  +   
Sbjct: 47  LKNEPNILLALHFFKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQ-LMKLEGIS 105

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
               LF  ++ +YR    +                   A  TF ++ ++G  P ++  N 
Sbjct: 106 CNEDLFVIVINAYRRAGLA-----------------EQALKTFYRIGEFGCKPSVKIYNH 148

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L +LL   +  +  G Y  M+R+ I  NVYT NM++ A CK   ++ A ++   M   G
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208

Query: 294 FIPSVTTYNTLISGHCNKGLL----SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            IP   +Y T++S  C  G +     L+M+ K+          V  +N LI GFC++ K+
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSF---------VPVYNALINGFCREHKM 259

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS-------------------- 389
            E   +F+EM    + P+V+TY+T+IN   ++GN EM  +                    
Sbjct: 260 EEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSL 319

Query: 390 ---------------LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
                          L+  M++ G + + + YN LI GLC  GK  +A  + + +++N +
Sbjct: 320 MKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGV 379

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN +TYS LI G     +   A +++  MI +GC PN  ++  ++   C+N  F+ A  
Sbjct: 380 FPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALH 439

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  M      P++I  +    GL   GK E AMK+  +M   G  P
Sbjct: 440 LIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAP 486



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 188/401 (46%), Gaps = 7/401 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ +  +D  D   KL   +  SY+ C    + +  +  +     K   A +    MR 
Sbjct: 184 LLKALCKNDRVDAARKLLAEM--SYKGCIPDAVSYTTVVSSMCRLGKVEEAREL--SMRI 239

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             F+P+    N  ++      +++     + EM    I P+V T + V++   ++G +E 
Sbjct: 240 KSFVPVY---NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEM 296

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ V   M   G  P+V T+ +L+ G+   G L  A+   N M + G +PN + +NTLI 
Sbjct: 297 ALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIH 356

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  GK+ EA  +  +M+   V PN  TY+TLI+G+ + G+    + ++ +M+ NG   
Sbjct: 357 GLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLP 416

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y  ++  LC+      A +L++++   +  PN  T++  I G C    +E A ++ 
Sbjct: 417 NVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVL 476

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M + GC PN   +  ++      +    A +++ E+ E  +  + +  + + SG  H 
Sbjct: 477 NQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA 536

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           G  + A+++  K+ + G  P        I    + GE ++ 
Sbjct: 537 GMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTA 577



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 3/354 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + +  +  T +       A     +M   G  P + +    +       R+  AL 
Sbjct: 275 DPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALD 334

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M +    PN    N ++H  C  G +  AV V + ME  G  P+ TTY+TLI G  
Sbjct: 335 LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFA 394

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A +  N M  NG  PNV+ +  ++   C+    + A  +   M   N  PN +
Sbjct: 395 KAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTI 454

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NT I G    G +E    +  +M + G   ++ TYN ++ GL    +T++A  +V ++
Sbjct: 455 TFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI 514

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           ++  +  N  TY+ +++G C     + A Q+   ++  G +P+   +  ++  +C+  + 
Sbjct: 515 EEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEV 574

Query: 490 DRAAEVLLEMLEKCMA-PDSIILSELYSGL-HHCGKDELAMKLFRKMEIRGLLP 541
             A +++  + +K    PD    + L  G+ +  G DE  + L  KM   G+ P
Sbjct: 575 KTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHL-DKMINEGICP 627



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 147/333 (44%), Gaps = 1/333 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   F  L K Y    +   A D + +M   G  P   + N  +  L    ++  
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   ++M RN + PN  T + ++  F K G +  A E++  M + G +P+V  Y  ++ 
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVD 426

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C   + + A+     M      PN ITFNT I G C  GK   A ++ ++M+    +P
Sbjct: 427 VLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAP 486

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TYN +++G      +     +  E+    IK +++TYN ++ G C  G  K A  + 
Sbjct: 487 NVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIA 546

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQ 485
             L      P++ TY+ +I   C +   + A QL   + + G   P+   +  L+   C 
Sbjct: 547 GKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCN 606

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               D A   L +M+ + + P+    + L  GL
Sbjct: 607 WIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 186/379 (49%), Gaps = 5/379 (1%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR ++ +   +   K  +S++Y   + D  P     L + +    K + AT     +   
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTS--LIRGFCRIGKTKKATWVMEILEQS 121

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + + N  +S    S  +D AL   + + R  ++P+V T N ++   C  G +++A
Sbjct: 122 GAVPDVITYNVLISGYCKSGEIDNAL---QVLDRMNVAPDVVTYNTILRTLCDSGKLKQA 178

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +EV          P V TY  LI   C +  +  AMK  + M   G +P+V+T+N LI G
Sbjct: 179 MEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLING 238

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G+L EA +  + M +    PNV+T+N ++      G       L  +MLR G    
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+N LI  LC++G   +A  +++ +  +   PN+ +Y+ L+ G C  K  +RA +   
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC P+   +  L++  C++   D A E+L ++  K  +P  I  + +  GL   G
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418

Query: 523 KDELAMKLFRKMEIRGLLP 541
           K E A+KL  +M  +GL P
Sbjct: 419 KTERAIKLLDEMRRKGLKP 437



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 167/315 (53%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L        +   A      M  YG  P + + N  L S+  + R   A     +
Sbjct: 230 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 289

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R   SP+V T N++++  C+ G++ RA+++ + M   G  P+  +YN L+ G C +  
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+++ ++M   G  P+++T+NTL+   CK GK+  A  I +++ +   SP ++TYNT
Sbjct: 350 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 409

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +VG +E    L +EM R G+K DI+TY++L+ GL +EGK  +A     DL+   
Sbjct: 410 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 469

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PNA TY++++ G C  + ++RA      MI   C+P +  + +L+           A 
Sbjct: 470 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 529

Query: 494 EVLLEMLEKCMAPDS 508
           ++L E+  + +   S
Sbjct: 530 DLLNELCSRGLVKKS 544



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 183/382 (47%), Gaps = 2/382 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +ILR + DS       ++ D  L   + C    + + +L +          A     +MR
Sbjct: 164 TILRTLCDSGKLKQAMEVLDRQLQ--KECYPDVITYTILIEATCKESGVGQAMKLLDEMR 221

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + N  ++ +    R+D A+ F   M      PNV T N+++ + C  G   
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  +M   G  PSV T+N LI+  C +GLL  A+     M  +G  PN +++N L+
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK+ K+  A      M +    P++VTYNTL+    + G  ++   +  ++   G  
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCS 401

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I GL K GKT++A  L+ ++ +  L P+  TYS+L++G       + A + 
Sbjct: 402 PVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKF 461

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G RPN   +  +M   C++   DRA + L  M+ K   P     + L  G+ +
Sbjct: 462 FHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAY 521

Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
            G  + A+ L  ++  RGL+ K
Sbjct: 522 EGLAKEALDLLNELCSRGLVKK 543



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 169/351 (48%), Gaps = 3/351 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L   Y    +  NA     +M      P + + N  L +L DS ++  A+     
Sbjct: 128 ITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
             +    P+V T  +++ A CK   + +A+++   M + G  P V TYN LI+G C +G 
Sbjct: 185 QLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGR 244

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+KF N M   G QPNVIT N ++   C  G+  +A ++ S+M     SP+VVT+N 
Sbjct: 245 LDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNI 304

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   + G       + E+M  +G   + L+YN L+ G CKE K  +A   +  +    
Sbjct: 305 LINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ L+T  C     + A ++   +   GC P    +  ++    +    +RA 
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++L EM  K + PD I  S L SGL   GK + A+K F  +E  G+ P   
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAI 475



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  +L                   + C  S + F++L  
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDML------------------RKGCSPSVVTFNILIN 307

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ +   M      P
Sbjct: 308 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 367

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 368 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 427

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P++IT+++L+ G  ++GK+ EA + F +++   + PN +TYN+++ G  + 
Sbjct: 428 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 487

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             ++        M+    K    TY  LI G+  EG  K+A  L+ +L    LV  +S 
Sbjct: 488 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 546


>gi|218191860|gb|EEC74287.1| hypothetical protein OsI_09537 [Oryza sativa Indica Group]
          Length = 689

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 140/538 (26%), Positives = 242/538 (44%), Gaps = 43/538 (7%)

Query: 31  FRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLI 90
           F R   +   + K+P      V  N  +     IPI HR +   + +D    N     L 
Sbjct: 49  FERGDILFLQMSKHPIRTGDIVVFNDGR----EIPIVHRVIEVHERRD----NAQVDFLT 100

Query: 91  HSDWKKLT--ALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKP-----SSLTLETH 143
             D   +    L TH   +  +H ++     Y+    + T V T KP          + H
Sbjct: 101 KGDNNPMDDRILYTHGQLWLQQHHIMGRAIGYLPKAGWVTLVMTEKPVIKSVDQTARQIH 160

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
           S      + +   KS+ S+LR        DL  +   S         + P +   L    
Sbjct: 161 SSSSAATSSSTLSKSARSLLR--------DLSLRHPLSSPLLLPSLLADPHLPSWLLLLL 212

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           +   +  +A   F  MR    +P   + +  L++L  S     A   + +M R  ++ N 
Sbjct: 213 SQSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNT 272

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           +  N ++H   K G    A  +   M++ G      ++NT+I+ +C KG+   AM  +  
Sbjct: 273 HVYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRER 332

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           ME  G++ +V+T+N+LI G CK+ ++ EA+++  EM    V+P+ VTY TL++GY + G+
Sbjct: 333 MENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGD 392

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            E    L  EM   G+   + TYNA++  LC++GK K+   L+ ++D+  +  +  T + 
Sbjct: 393 LEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNT 452

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI   C R +   A ++ + M+ SG + ++  ++ L+  FC+ ++ D A E L EM+   
Sbjct: 453 LINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAG 512

Query: 504 MAPDSIILSELYSGLHHCGK----------DELAMK-------LFRKMEIRGLLPKGF 544
            +P+  +LS +  GL  C K          DEL  +       ++R + IR L  KGF
Sbjct: 513 FSPNYSVLSWIVDGL--CNKNNAVAVLAIPDELMKRGFPPDKAVYRSL-IRRLCKKGF 567



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 141/293 (48%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + M    +  +V T N ++H  CK   ++ A ++ + M   G  P   TY TL+ 
Sbjct: 326 AMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVD 385

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G L  A+K +  ME  G+ P V T+N ++   C+ GK+ E N + +EM    V  
Sbjct: 386 GYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQA 445

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y + G+      +   M+ +G+++D  TY AL+ G CK  +  +A   +
Sbjct: 446 DHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEAL 505

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN S  S ++ G C + N+     +   +++ G  P+K ++  L+   C+ 
Sbjct: 506 FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKK 565

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              D A  V  EM  K +  D ++ + L       GK   A+ +  +M  + L
Sbjct: 566 GFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQL 618



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 35/262 (13%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G    + + N  +  L    RV  A    +EM    ++P+  T   ++  +C+ G
Sbjct: 332 RMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAG 391

Query: 278 IIERAVEVFKNMESMGFIPSVTTY-----------------------------------N 302
            +E AV++   ME+MG +P V TY                                   N
Sbjct: 392 DLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCN 451

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLI+ +C +G ++ A+K K  M ++G+Q +  T+  L+ GFCK  +L EA     EM   
Sbjct: 452 TLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGA 511

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SPN    + +++G     N+    ++ +E+++ G   D   Y +LI  LCK+G    A
Sbjct: 512 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLA 571

Query: 423 AYLVKDLDKNSLVPNASTYSAL 444
             +  ++    L  +   Y+ L
Sbjct: 572 GNVFNEMQGKGLEADCLVYATL 593



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/301 (21%), Positives = 113/301 (37%), Gaps = 18/301 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + ++H L K R+ K +  +LR         +     D + Y+             L  
Sbjct: 344 TWNSLIHGLCKERRVKEASQLLR------EMAMAGVAPDHVTYT------------TLVD 385

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y        A     +M   G LP + + N  L  L +  ++        EM   ++  
Sbjct: 386 GYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQA 445

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T N +++A+CK G +  A++V + M   G      TY  L+ G C    L  A +  
Sbjct: 446 DHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEAL 505

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   G  PN    + ++ G C K        I  E+      P+   Y +LI    + 
Sbjct: 506 FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKK 565

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++  +++ EM   G++ D L Y  L       GK   A  ++ ++ K  L      Y
Sbjct: 566 GFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIY 625

Query: 442 S 442
           +
Sbjct: 626 N 626


>gi|449455312|ref|XP_004145397.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
 gi|449472579|ref|XP_004153637.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 207/439 (47%), Gaps = 29/439 (6%)

Query: 92  SDWKKLTALSTH-LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
           S W+ L +L  +   P     +LL+++ +  L+L FF W Q     +  L ++S ++HIL
Sbjct: 57  SRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHIL 116

Query: 151 TKNRKFKSSESILRGIL------DSDSFD--------LPSKLFDSILYSYRMCDSSPLVF 196
            + R    ++ +++  +      DSD++          P KLF++++ +Y+ C S+P VF
Sbjct: 117 ARGRLRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVF 176

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-- 254
           DLL K     KK  ++ +    +R  G  P + + N  +  +   +  ++A   ++E+  
Sbjct: 177 DLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFG 236

Query: 255 -----------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
                       + R+SPNV+T N +M  F + G   R  E++  +      P+  +Y+ 
Sbjct: 237 LDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSI 296

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++  C +     A +    M+   ++P+V+ +NT+I GFCK G  H A   + EM+ + 
Sbjct: 297 LMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSG 356

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +     T   LINGY   G+ +    +Y++M R    ++  T   LI  LC E +  +A 
Sbjct: 357 IESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEAL 416

Query: 424 YLVK-DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            +    ++ +S  P   T+  LI   C     E AF+L   M+  G +PN  I++  +  
Sbjct: 417 DVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDA 476

Query: 483 FCQNEDFDRAAEVLLEMLE 501
           + +  + +   ++  EM E
Sbjct: 477 YTKEGNAEMVEKLWKEMHE 495



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 1/218 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           Q+ D    P   S +  ++ L + +R   A   ++EM+  ++ P+V   N ++  FCK G
Sbjct: 281 QLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAG 340

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
              RA E ++ ME  G   + +T   LI+G+C+ G +  A+     M +     N  T  
Sbjct: 341 HTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLE 400

Query: 338 TLIFGFCKKGKLHEANRIFS-EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            LI   C + +L EA  +F   ++ ++  P + T+  LIN   Q G  E    L  +M+ 
Sbjct: 401 GLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVG 460

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
            G K ++  Y + I    KEG  +    L K++ +  L
Sbjct: 461 RGFKPNLKIYQSFIDAYTKEGNAEMVEKLWKEMHEIQL 498



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 110/240 (45%), Gaps = 18/240 (7%)

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           L + E  V+ +K   S  F+     ++ LI    +   L  +++   ++   GI P V T
Sbjct: 156 LKLFETLVKTYKRCGSAPFV-----FDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVST 210

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATN-------------VSPNVVTYNTLINGYGQVG 382
            N+LI    K    + A  IF E+   +             VSPNV T+NTL++ + + G
Sbjct: 211 LNSLILLVSKCQGANVAYAIFREVFGLDCEIEEEHVKLKGRVSPNVHTFNTLMDCFYRDG 270

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
            +     +++++  +    +  +Y+ L+  LC+E +T +A  L +++    L P+   Y+
Sbjct: 271 FAGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +I G C   ++ RA + Y+ M  SG        E L++ +C   D D A  V  +M  K
Sbjct: 331 TIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRK 390



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 1/155 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + + +M   G      +    ++   D+  VD AL  YK+MRR + S N  TL  ++ 
Sbjct: 345 AEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIR 404

Query: 272 AFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             C    +  A++VF   +E   F P++ T+  LI+  C +G +  A K +  M   G +
Sbjct: 405 MLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFK 464

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           PN+  + + I  + K+G      +++ EM    +S
Sbjct: 465 PNLKIYQSFIDAYTKEGNAEMVEKLWKEMHEIQLS 499



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/207 (20%), Positives = 88/207 (42%), Gaps = 26/207 (12%)

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            F+ LI       KL  +  I   +++  +SP V T N+LI    +   + +  +++ E+
Sbjct: 175 VFDLLIKALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN- 453
              G+  +I   +  +                    K  + PN  T++ L+   C  ++ 
Sbjct: 235 F--GLDCEIEEEHVKL--------------------KGRVSPNVHTFNTLM--DCFYRDG 270

Query: 454 -SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            + R  +++  +  S   PN + + +LM+  C+ +    A E+  EM  K + PD +  +
Sbjct: 271 FAGRVKEIWDQLADSNSTPNSYSYSILMTVLCEEKRTGEAEELWEEMKMKKLEPDVVAYN 330

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  G    G    A + +R+ME+ G+
Sbjct: 331 TIIGGFCKAGHTHRAEEFYREMELSGI 357


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 213/444 (47%), Gaps = 3/444 (0%)

Query: 99  ALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKS 158
           ++S+ L P  V+ VL+    D  L+L FF ++  HK  + T  + +I++H L +N+ F  
Sbjct: 55  SISSTLKPHHVEQVLINTLHDSKLALRFFNFLGLHKNMNHTTTSFAILVHALVQNKLFWP 114

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRKKFRNATDTFC 217
           + S+L  +L   S   P  +F+  L S++ C  SS L FD L  +Y    +  +A     
Sbjct: 115 ANSLLHTLLLRGSD--PKFVFEKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLR 172

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M     LP + + +  L+ LL   +  +    + E     + P+ YT + V+ + C+L 
Sbjct: 173 LMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELK 232

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
              RA E    MES  F  S+ TYN LI G C  G +  A++ +  + + G++ +V+T+ 
Sbjct: 233 DFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYC 292

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ GFC+  +  +   + +EM      P     + L++G  + GN +    L  ++ R 
Sbjct: 293 TLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRF 352

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   ++  YNALI  LCK     KA  L K++   +L  N  TYS LI   C R   + A
Sbjct: 353 GFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVA 412

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              +  MI  G R   + +  L++  C+  D   A  +  +M+ + + P +   + L SG
Sbjct: 413 ESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISG 472

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
                + E A KL+R+M  + + P
Sbjct: 473 YCKDLQVEKAFKLYREMNEKEIAP 496



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 37/334 (11%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D+A  ++  M  + I   +Y  N +++  CK G +  A  ++  M + G  P+ TT+ T
Sbjct: 409 LDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTT 468

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LISG+C    +  A K    M +  I P+V TF  LI+G C   ++ EA+++F EM    
Sbjct: 469 LISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK 528

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P  VTYN +I GY +  N +    L E+ML NG+  D  TY  LI GLC  G+   A 
Sbjct: 529 IKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAK 588

Query: 424 YLVKDLDKNSLVPNASTYSALITGQC---------------------------------- 449
             + DL K +L  N   YSAL+ G C                                  
Sbjct: 589 DFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGA 648

Query: 450 -VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL-LEMLEKCMAPD 507
             +++ +R F L K M   G RP+  I+  ++  + +   F ++ E L L + EKC  P+
Sbjct: 649 MKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF-PN 707

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  +   +GL   G+ + A  LF KM    + P
Sbjct: 708 VVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISP 741



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 199/421 (47%), Gaps = 29/421 (6%)

Query: 142 THSIVLHILTKNRKF-KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           T S V+  L + + F ++ E IL   ++S+ FDL    ++ +++   +C    ++  L  
Sbjct: 220 TCSAVIRSLCELKDFCRAKEKIL--WMESNRFDLSIVTYNVLIHG--LCKGGGVLEALEV 275

Query: 201 KTYAHRKKFRNATDTFC--------------------QMRDYGFLPIIESCNKFLSSLLD 240
           +     K  +    T+C                    +M + GF+P   + +  +  L  
Sbjct: 276 RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRK 335

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
              +D A     ++ R    PN++  N +++A CK   +++A  ++KNM SM    +  T
Sbjct: 336 KGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y+ LI   C +G+L +A  +   M ++GI+  +  +N+LI G CK G L  A  ++++M 
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              + P   T+ TLI+GY +    E    LY EM    I   + T+ ALI GLC   +  
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A+ L  ++ +  + P   TY+ +I G C   N ++AF+L + M+ +G  P+ + +  L+
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI--RG 538
           S  C       A + + ++ +K +  + +  S L  G  +CG+  L   L    E+  RG
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHG--YCGQGRLTEALSASCEMIQRG 633

Query: 539 L 539
           +
Sbjct: 634 I 634



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/423 (23%), Positives = 185/423 (43%), Gaps = 47/423 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  ++     SKLFD ++   R    + + ++++ + Y        A +    M 
Sbjct: 503 ALIYGLCSTNEMAEASKLFDEMVE--RKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDML 560

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG--- 277
             G +P   +    +S L  + RV  A  F  ++ +  +  N    + ++H +C  G   
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLT 620

Query: 278 --------IIERAVE------------------------VFKNMESMGFIPSVTTYNTLI 305
                   +I+R +                         + K M   G  P    Y ++I
Sbjct: 621 EALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMI 680

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             +  +G    + +  +LM      PNV+T+   + G CK G++  A  +F +M   N+S
Sbjct: 681 DAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANIS 740

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN VTY   ++   + GN +    L+ EML+ G+  +  TYN LI G CK G+  +A  +
Sbjct: 741 PNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKV 799

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + ++ +N + P+  TYS +I   C   +   A +L+ +M+R G  P+   F +L+   C 
Sbjct: 800 LSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCV 859

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSE---------LYSGLHHCGKDELAMKLFRKMEI 536
           N   D+A E+  +ML + + P  I+  +         L  G    G+ + A++L+  M  
Sbjct: 860 NGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLT 919

Query: 537 RGL 539
           R +
Sbjct: 920 RAV 922



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/326 (25%), Positives = 150/326 (46%), Gaps = 1/326 (0%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + +M + G  P   +    +S      +V+ A   Y+EM    I+P+VYT   +++  C 
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS 510

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              +  A ++F  M      P+  TYN +I G+C    +  A +    M  NG+ P+  T
Sbjct: 511 TNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYT 570

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  LI G C  G++  A     ++   N+  N + Y+ L++GY   G      S   EM+
Sbjct: 571 YRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMI 630

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           + GI +D++ +  LI G  K+   K+   L+K +    L P++  Y+++I       + +
Sbjct: 631 QRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFK 690

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           ++ +    M+   C PN   +   M+  C+  + DRA  +  +ML   ++P+S+      
Sbjct: 691 KSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFL 750

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
             L   G  + A  L  +M ++GLL 
Sbjct: 751 DSLTKEGNMKEATDLHHEM-LKGLLA 775



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 161/346 (46%), Gaps = 1/346 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L   Y    +   A   + +M +    P + +    +  L  +  +  A   + EM 
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             +I P   T N+++  +CK   +++A E+ ++M   G +P   TY  LISG C+ G +S
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A  F + + K  ++ N + ++ L+ G+C +G+L EA     EM    ++ ++V +  LI
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +  + +    L ++M   G++ D + Y ++I    KEG  KK+   +  +      
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+A + G C     +RA  L++ M+ +   PN   +   + +  +  +   A ++
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EML+  +A ++   + L  G    G+   A K+  +M   G+ P
Sbjct: 766 HHEMLKGLLA-NTATYNILIRGFCKLGRLIEATKVLSEMTENGIFP 810



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 115/235 (48%), Gaps = 10/235 (4%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +  PNV T    M+  CK+G I+RA  +F+ M +    P+  TY   +     +G 
Sbjct: 699 MVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGN 758

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    + M K G+  N  T+N LI GFCK G+L EA ++ SEM    + P+ +TY+T
Sbjct: 759 MKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYST 817

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I  + + G+      L++ MLR G++ D + +N LI G C  G   KA  L  D+    
Sbjct: 818 IIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRG 877

Query: 434 LVP---------NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           L P         +    + L+ G CV    + A +LY SM+    + +  +++ L
Sbjct: 878 LKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 89/187 (47%), Gaps = 10/187 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
           FL SL     +  A   + EM +  ++ N  T N+++  FCKLG +  A +V   M   G
Sbjct: 749 FLDSLTKEGNMKEATDLHHEMLKGLLA-NTATYNILIRGFCKLGRLIEATKVLSEMTENG 807

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY+T+I  HC  G +  A++  + M + G++P+ + FN LI+G C  G L +A 
Sbjct: 808 IFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAF 867

Query: 354 RIFSEMKATNVSPNVV---------TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
            + ++M +  + P  +           N L++G    G  +    LY  ML   +K+ + 
Sbjct: 868 ELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTRAVKLSLE 927

Query: 405 TYNALIL 411
            +  L L
Sbjct: 928 MWKCLYL 934



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 2/230 (0%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + + F+ L+  + +  ++ +A  +   M    + P V T + ++NG  ++    +   ++
Sbjct: 147 STLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVF 206

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +E +  G+K D  T +A+I  LC+     +A   +  ++ N    +  TY+ LI G C  
Sbjct: 207 DESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKG 266

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A ++ KS+   G + +   +  L+  FC+ + FD    ++ EM+E    P    +
Sbjct: 267 GGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAV 326

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPENGEK 559
           S L  GL   G  + A  L  K+   G LP  F     IN  C  E+ +K
Sbjct: 327 SGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDK 376


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 167/315 (53%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L        +   A      M  YG  P + + N  L S+  + R   A     +
Sbjct: 118 VTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSD 177

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R   SP+V T N++++  C+ G++ RA+++ + M   G  P+  +YN L+ G C +  
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+++ ++M   G  P+++T+NTL+   CK GK+  A  I +++ +   SP ++TYNT
Sbjct: 238 MDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNT 297

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +VG +E    L +EM R G+K DI+TY++L+ GL +EGK  +A     DL+   
Sbjct: 298 VIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLG 357

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PNA TY++++ G C  + ++RA      MI   C+P +  + +L+           A 
Sbjct: 358 IRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEAL 417

Query: 494 EVLLEMLEKCMAPDS 508
           ++L E+  + +   S
Sbjct: 418 DLLNELCSRGLVKKS 432



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 168/347 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F    +T         A     +MR+ G  P + + N  ++ +    R+D A+ F   M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV T N+++ + C  G    A ++  +M   G  PSV T+N LI+  C +GLL 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M  +G  PN +++N L+ GFCK+ K+  A      M +    P++VTYNTL+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               + G  ++   +  ++   G    ++TYN +I GL K GKT++A  L+ ++ +  L 
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+L++G       + A + +  +   G RPN   +  +M   C++   DRA + 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           L  M+ K   P     + L  G+ + G  + A+ L  ++  RGL+ K
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKK 431



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 129/245 (52%)

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           S++ ++  +   C +  +  AMK  + M   G +P+V+T+N LI G CK+G+L EA +  
Sbjct: 81  SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + M +    PNV+T+N ++      G       L  +MLR G    ++T+N LI  LC++
Sbjct: 141 NNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A  +++ +  +   PN+ +Y+ L+ G C  K  +RA +    M+  GC P+   +
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L++  C++   D A E+L ++  K  +P  I  + +  GL   GK E A+KL  +M  
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320

Query: 537 RGLLP 541
           +GL P
Sbjct: 321 KGLKP 325



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 140/299 (46%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E +L  +L                   + C  S + F++L  
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLR------------------KGCSPSVVTFNILIN 195

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L      +++D A+ +   M      P
Sbjct: 196 FLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 255

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P++IT+++L+ G  ++GK+ EA + F +++   + PN +TYN+++ G  + 
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             ++        M+    K    TY  LI G+  EG  K+A  L+ +L    LV  +S 
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 177/351 (50%), Gaps = 2/351 (0%)

Query: 193 PLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           P V D   +  + A+ K +        QM   G    + +    ++S     RVD     
Sbjct: 72  PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++ +    P+  T   ++   C  G I  A+ +F  M   GF P+  TY TLI G C 
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G    A++    M +   +PNVIT+NT+I    K  +++EA  IFSEM A  +SPNV T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN++I+G  +    +  A+L  EM+ + I  +++ +  L+  LCKEG    A  +V  + 
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  + P+  TY+AL+ G C+R   + A +++ +M+R GC PN   +  L++ +C+ +  D
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A  +  EM ++ + P+ +  + L  GL H G+   A+ LF +M   G +P
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIP 422



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 166/316 (52%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +  L    +V+ AL  + EM    ISPNV T N ++H  CK    +    +
Sbjct: 212 PNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATL 271

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M     +P+V  + TL+   C +G++++A    ++M + G++P+V+T+  L+ G C 
Sbjct: 272 MNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCL 331

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ EA+++F  M     +PNV++Y+TLINGY ++   +    L+EEM +  +  +I+T
Sbjct: 332 RSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVT 391

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLC  G+ + A  L  ++  +  +P+  TY  L+   C  ++ ++A  + K++ 
Sbjct: 392 YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIE 451

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S   P+   + +++   C+  + + A ++   +  K + PD    + + +GL   G   
Sbjct: 452 GSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLA 511

Query: 526 LAMKLFRKMEIRGLLP 541
            A KLFR+M   G  P
Sbjct: 512 EATKLFREMNTDGCSP 527



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 4/344 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + D LFK     ++   A + F +M   G  P + + N  +  L              EM
Sbjct: 220 IIDCLFKD----RQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             ++I PNV     ++ A CK G++  A +V   M   G  P V TY  L+ GHC +  +
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A K  + M + G  PNVI+++TLI G+CK  ++ +A  +F EM    + PN+VTYNTL
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G   VG      +L+ EM+ +G   D++TY  L+  LCK     +A  ++K ++ ++L
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  +Y+ +I G C     E A  L+ S+   G  P+   + ++++  C       A +
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  EM     +PD    + +  G     +   A++L ++M  RG
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 162/356 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L +      K   A   F +M   GF P   +    +  L        A+   + M 
Sbjct: 147 FTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMV 206

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    PNV T N ++    K   +  A+ +F  M + G  P+V+TYN++I G C      
Sbjct: 207 QKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWK 266

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
                 N M  + I PNV+ F TL+   CK+G +  A+ +   M    V P+VVTY  L+
Sbjct: 267 HVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALM 326

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+      +    +++ M+R G   ++++Y+ LI G CK  +  KA YL +++ +  LV
Sbjct: 327 DGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELV 386

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ LI G C       A  L+  M+ SG  P+   + +L+   C+    D+A  +
Sbjct: 387 PNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAM 446

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           L  +    +APD    + +  G+   G+ E A  LF  +  +GL P  +     IN
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 161/334 (48%), Gaps = 6/334 (1%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
           F  + H     N      +M D   +P +      + +L     V IA      M +  +
Sbjct: 262 FSEWKHVATLMN------EMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V T   +M   C    ++ A +VF  M   G  P+V +Y+TLI+G+C    +  AM 
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M +  + PN++T+NTLI G C  G+L +A  +F EM A+   P++VTY  L++   
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +  + +   ++ + +  + +  DI +YN +I G+C+ G+ + A  L   L    L P+  
Sbjct: 436 KTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVW 495

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ +I G C++     A +L++ M   GC P+   + ++   F +N +   A ++L EM
Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           L +  + D+  ++ +   L   G D+   ++  +
Sbjct: 556 LGRGFSADASTITLIVEMLSDDGLDQSVKQILHE 589



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 90/182 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L     H  + R+A   F +M   G +P + +    L  L  +  +D A+   K 
Sbjct: 390 VTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKA 449

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + ++P++ + N+V+   C++G +E A ++F ++ S G  P V TY  +I+G C +GL
Sbjct: 450 IEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGL 509

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A K    M  +G  P+  T+N +  GF +  +   A ++  EM     S +  T   
Sbjct: 510 LAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITL 569

Query: 374 LI 375
           ++
Sbjct: 570 IV 571


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 173/331 (52%), Gaps = 2/331 (0%)

Query: 213 TDTFC--QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           TD  C   M   G++P + + N  ++ L  +++++ A    + M    ++P+V T ++++
Sbjct: 241 TDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 300

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            AFCK   ++ A+E+   M S G  P+V T+N++I G C       A +    +    + 
Sbjct: 301 DAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLV 360

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+ +TFN LI G CK G   +A+ +F EM A N+ P+V+T+  LI+G  + G  E    +
Sbjct: 361 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDI 420

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            + M   G+  +++TYN L+ GLCK G+ ++    ++++  +  VP + TY +L+   C 
Sbjct: 421 LDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              ++ A QL   +   G  P+   + +L+    ++   ++A  VL EM+ K   PDS  
Sbjct: 481 ASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + GLH  G     M+L R +  +G+LP
Sbjct: 541 FAACFGGLHRSGNLAGTMELLRVVLAKGMLP 571



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 148/284 (52%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PNV T N +++  CK   +ERA  + ++M   G  P V TY+ L+   C    +  A++ 
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 315

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + M   G  PNV+TFN++I G CK  +  EA +I  ++    + P+ VT+N LI G  +
Sbjct: 316 LHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACK 375

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            GN E  ++L+EEM+   ++ D++T+ ALI GLCK G+ + A  ++  +    + PN  T
Sbjct: 376 AGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 435

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G C     E   +  + M+ SGC P    +  L+   C+    D A +++ ++ 
Sbjct: 436 YNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                PD++  + L  GL   GK E A+ +  +M  +G  P  F
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSF 539



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 214/469 (45%), Gaps = 34/469 (7%)

Query: 98  TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFK 157
           TA +  L P  +    +  Q+  +  L+FF +V++   SS ++  ++IVL  L +  +  
Sbjct: 9   TAAANLLVP--ITTATINTQRVNLCPLKFF-FVRS---SSRSVADYNIVLQSLCRAGETA 62

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-----VFDLLFKTYAHRK--KFR 210
            +  I RG +  D        +++I+    +C S+ L     +F+ L K   H     + 
Sbjct: 63  RALEIFRGEMARDGVAPTIVTYNTIING--LCKSNELGAGMELFEELVKRGHHPDVVTYN 120

Query: 211 NATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
              D+ C+  D              G +P + + +  ++ L    R+D A    +EM R 
Sbjct: 121 TLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRK 180

Query: 258 R--ISPNVYTLNMVMHAFCKLGIIERAVEVFKNME--SMGFIPSVTTYNTLISGHCNKGL 313
              + PN+ T N  +   CK  +   A E+ +++   S+   P   T++TLI G C  G 
Sbjct: 181 SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 240

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A    + M   G  PNV+T+N L+ G CK  K+  A+ +   M    V+P+V+TY+ 
Sbjct: 241 TDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSV 298

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++ + +    +    L   M   G   +++T+N++I GLCK  ++ +A  +   +    
Sbjct: 299 LVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM 358

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVP+  T++ LI G C   N E+A  L++ M+    +P+   F  L+   C+    + A 
Sbjct: 359 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAAR 418

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           ++L  M    + P+ +  + L  GL   G+ E   +   +M   G +P+
Sbjct: 419 DILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPE 467



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 2/322 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L        K   A      M D G  P + + +  + +   + RVD AL     
Sbjct: 259 VTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHG 318

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     +PNV T N ++   CK      A ++   + +   +P   T+N LI+G C  G 
Sbjct: 319 MASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGN 378

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
              A   F+ ++ KN +QP+V+TF  LI G CK G++  A  I   M    V PNVVTYN
Sbjct: 379 FEQASALFEEMVAKN-MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 437

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++G  + G  E      EEM+ +G   + +TY +L+  LC+  +T  A  LV  L   
Sbjct: 438 VLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSF 497

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+  TY+ L+ G      +E+A  + + M+  G +P+   F        ++ +    
Sbjct: 498 GWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGT 557

Query: 493 AEVLLEMLEKCMAPDSIILSEL 514
            E+L  +L K M PD+   S +
Sbjct: 558 MELLRVVLAKGMLPDATTCSSI 579



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 153/321 (47%), Gaps = 17/321 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILY---- 184
           T++ +++ L K  K + + +++  ++D              D+F   S++ +++      
Sbjct: 260 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 319

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           + R C  + + F+ +        +   A     Q+ +   +P   + N  ++    +   
Sbjct: 320 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNF 379

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A   ++EM    + P+V T   ++   CK G +E A ++   M ++G  P+V TYN L
Sbjct: 380 EQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVL 439

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           + G C  G +    +F   M  +G  P  +T+ +L++  C+  +  +A ++ S++K+   
Sbjct: 440 VHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGW 499

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ VTYN L++G  + G +E   ++ EEM+  G + D  T+ A   GL + G       
Sbjct: 500 DPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTME 559

Query: 425 LVKDLDKNSLVPNASTYSALI 445
           L++ +    ++P+A+T S+++
Sbjct: 560 LLRVVLAKGMLPDATTCSSIL 580



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 89/215 (41%), Gaps = 2/215 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   + +F+  S LF+ ++      D   + F  L        +   A D    M +
Sbjct: 369 LIAGACKAGNFEQASALFEEMVAKNMQPDV--MTFGALIDGLCKAGQVEAARDILDLMGN 426

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  +  L  S R++    F +EM  +   P   T   +++A C+    + 
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++   ++S G+ P   TYN L+ G    G    A+     M   G QP+  TF     
Sbjct: 487 ALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFG 546

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           G  + G L     +   + A  + P+  T +++++
Sbjct: 547 GLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 10/312 (3%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+P+ YT   ++  +CK+G +E A +VF  M 
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEML 210

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + PS   YN LI G+C++G L +A++++  M + G+   V T+N L+      G+ 
Sbjct: 211 TQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRA 270

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  +  EM+   +SP+V TYN LINGY + GN +    ++EEM R G++   +TY +L
Sbjct: 271 SDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSL 330

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I    ++G+ ++   L K   K  + P+   Y+ALI   C   + ERAF++   M +   
Sbjct: 331 IYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRI 390

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  L+  FC     D A  ++ EM ++ + PD         GL   G+ + A  
Sbjct: 391 PPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD--------LGLCKNGQGDDAEN 442

Query: 530 LFRKMEIRGLLP 541
           L ++M  +G+ P
Sbjct: 443 LMKEMVGKGITP 454



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 140/272 (51%), Gaps = 9/272 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +K+FD +L    +  S+ ++++ L   Y  R K   A      M   G    + + N  +
Sbjct: 203 AKVFDEMLTQGEVAPSA-VMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLV 261

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            +L    R   A    +EM+RN +SP+V+T N++++ +CK G  ++A+EVF+ M   G  
Sbjct: 262 HALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVR 321

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
            +  TY +LI     KG +    +   +  K GI+P+V+ +N LI   C  G +  A  I
Sbjct: 322 ATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEI 381

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
            +EM+   + P+ VTYNTLI G+  +G  +    L +EM + GI+ D        LGLCK
Sbjct: 382 MAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD--------LGLCK 433

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            G+   A  L+K++    + P+ STY +LI G
Sbjct: 434 NGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 97/423 (22%), Positives = 169/423 (39%), Gaps = 115/423 (27%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +SP +  LL    A  +    +   + Q++       + S +  LSSL  +     A   
Sbjct: 48  ASPSLPHLLLTASAAARPHATSLRFYAQLKSLSVPIPVASLHPLLSSLPSAP----AFAL 103

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + ++ R R+     T N+++   C  G   RA+E+ + M                     
Sbjct: 104 FADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP-------------------- 143

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVV 369
                              +PN +T+NT+I GFC +G++  A  +  EM+    ++P+  
Sbjct: 144 -------------------RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKY 184

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNG-IKVDILTYNALILGLCKEGKTKKA------ 422
           TY TLI+G+ ++G  E  A +++EML  G +    + YNALI G C  GK   A      
Sbjct: 185 TYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYRED 244

Query: 423 ----------------------------AYLV-KDLDKNSLVPNASTYSALITGQCVRKN 453
                                       AY V +++ +N L P+  TY+ LI G C   N
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304

Query: 454 SERAFQLYKSM-----------------------------------IRSGCRPNKHIFEM 478
            ++A ++++ M                                   ++ G RP+  ++  
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+++ C   D +RA E++ EM +K + PD +  + L  G    G+ + A  L  +M  RG
Sbjct: 365 LINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRG 424

Query: 539 LLP 541
           + P
Sbjct: 425 IQP 427


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 177/350 (50%), Gaps = 6/350 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L    A    +      + +MR  G  P + + +   + L +  RV  AL     + 
Sbjct: 94  FNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL 153

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    PNV T   ++   C    I  A  +F  M+ +G  P+  TY TLI G C  G ++
Sbjct: 154 RRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVN 213

Query: 316 LAMKFKNLMEKNGIQ------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +A+K    M  +  Q      P VIT++ +I G CK G+  EA  +F EMKA  + P+V+
Sbjct: 214 IALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVI 273

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +Y+TLI+G+   G  +    L++EM+  G++ D++T++ LI  LCKEGK  +A  L++ +
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVM 333

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  +VPN  TY++LI G C+  +   A +L+ SM   G  P++  +  L++ +C+    
Sbjct: 334 IQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKV 393

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             A  +  EML+   +P+      L  GL   GK   A KLF  M+  G+
Sbjct: 394 KEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGV 443



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 172/354 (48%), Gaps = 6/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L K      +   AT  F +M+  G  P   +    +  L  +  V+IAL  +KE
Sbjct: 162 VTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE 221

Query: 254 MRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           M  +         P V T ++++   CK+G  + A E+F+ M++ G IP V +Y+TLI G
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G    +    + M   G+QP+++TF+ LI   CK+GK+ EA ++   M    + PN
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           ++TYN+LI+G+  VG+      L+  M   G++ D ++Y  LI G CK  K K+A  L  
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ +    PN +TY  L+ G   +     A +L+  M   G   N  I+ + +   C+N+
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A E+  E+       +    S L  GL   GK E A +LF K+   GL P
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQP 515



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 180/385 (46%), Gaps = 4/385 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++++G+  + + ++  KL   +L         C    + + ++        +   A + F
Sbjct: 201 TLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELF 260

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M+  G +P + S +  +     + + D +   + EM    + P++ T ++++   CK 
Sbjct: 261 EEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKE 320

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G +  A ++ + M   G +P++ TYN+LI G C  G L+ A +    M   G++P+ I++
Sbjct: 321 GKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISY 380

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            TLI G+CK  K+ EA  +++EM     SPNV TY TL+ G  Q G       L+  M  
Sbjct: 381 TTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKT 440

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  +   Y   + GLCK     +A  L  +L   +   N   YS LI G C     E 
Sbjct: 441 YGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLET 500

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A++L++ + + G +P+   + +++  FC+    D A  +  +M E    PD I  + L  
Sbjct: 501 AWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLC 560

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G     K E  +KL  KM  + + P
Sbjct: 561 GFCEGNKLEEVIKLLHKMVQKDVSP 585



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%), Gaps = 6/311 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  F+  M R+   P + + N ++    K+    +   ++  M   G  P + T + L +
Sbjct: 75  AFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILAN 134

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN   +S A+     + + G  PNV+T+ TLI G C + ++ EA R+F  M+    +P
Sbjct: 135 CLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTP 194

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNG------IKVDILTYNALILGLCKEGKTK 420
           N VTY TLI G  Q GN  +   L++EML +        K  ++TY+ +I GLCK G+  
Sbjct: 195 NAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGRED 254

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A  L +++    ++P+  +YS LI G C     +++  L+  M+  G +P+   F +L+
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            T C+      A ++L  M+++ + P+ I  + L  G    G    A +LF  M  +GL 
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLE 374

Query: 541 PKGFDKLRTIN 551
           P        IN
Sbjct: 375 PDEISYTTLIN 385



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 2/339 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G   +  +D    LFD ++      D   + F +L  T     K   A     
Sbjct: 274 SYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDM--VTFSVLIDTLCKEGKVTEAKKLLE 331

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G +P + + N  +        ++ A   +  M    + P+  +   +++ +CK  
Sbjct: 332 VMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTW 391

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A+ ++  M  +G  P+VTTY TL+ G   KG +  A K   +M+  G+  N   + 
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYG 451

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             + G CK   L EA  +F+E+K+ N   N+  Y+ LI+G  + G  E    L+E++ + 
Sbjct: 452 IFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE 511

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++ D++TYN +I G CK G+   A  L + +++N   P+   Y+ L+ G C     E  
Sbjct: 512 GLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEV 571

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
            +L   M++    PN     +++   C++E + +  ++L
Sbjct: 572 IKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 8/206 (3%)

Query: 344 CKKGKLH--EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           CK G +   +A   F  M  ++  P + ++N L+ G  ++ +     SLY EM   G+  
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ T + L   LC   +  +A   +  + +   +PN  TY+ LI G C+      A +L+
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC------MAPDSIILSELY 515
             M + GC PN   +  L+   CQ  + + A ++  EML           P  I  S + 
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   G+++ A +LF +M+ +G++P
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIP 270


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 167/332 (50%), Gaps = 17/332 (5%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP----------------NVYTLNMV 269
           P IE  NK L SL+ S+     L   ++M    I+P                N  T   +
Sbjct: 75  PAIE-FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTL 133

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +   C  G I +A+    N+ +MGF      Y TLI G C  G    A+     ++ N +
Sbjct: 134 IKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLV 193

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QPNV+ ++T+I G CK   +++A  ++SEM +  +SPNVVTY+ LI+G+  VG  +    
Sbjct: 194 QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAID 253

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ +M+   IK D+ T+N L+ G CK+GK K+   +   + K  + PN  TY +L+ G C
Sbjct: 254 LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYC 313

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           + K   +A  +  +M + G  P+   + +L+  FC+ +  D A  +  EM  K + PD +
Sbjct: 314 LVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVV 373

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + L  GL   GK   A+KL  +M  RG+ P
Sbjct: 374 TYNSLIDGLCKLGKISYALKLVDEMHDRGVPP 405



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 172/334 (51%), Gaps = 1/334 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D + +M   G  P + + +  +S      ++  A+  + +M    I P+VYT 
Sbjct: 211 KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTF 270

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++  FCK G ++    VF  M   G  P+V TY +L+ G+C    ++ A      M +
Sbjct: 271 NILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQ 330

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G+ P++ ++N LI GFCK  K+ EA  +F EM   ++ P+VVTYN+LI+G  ++G    
Sbjct: 331 RGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISY 390

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L +EM   G+  DI+TY++++  LCK  +  KA  L+  L    + PN  TY+ LI 
Sbjct: 391 ALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILID 450

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     E A  +++ ++  G     + + +++  FC    FD A  +L +M +    P
Sbjct: 451 GLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIP 510

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           D++    +   L    +++ A KL R+M  RGLL
Sbjct: 511 DAVTYEIIIRSLFDKDENDKAEKL-REMITRGLL 543



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 148/292 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +  N + PNV   + ++   CK   +  A +++  M S G  P+V TY+ LIS
Sbjct: 181 ALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 240

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G L  A+   N M    I+P+V TFN L+ GFCK GK+ E   +F+ M    + P
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTY +L++GY  V       S+   M + G+  DI +YN LI G CK  K  +A  L 
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLF 360

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++    ++P+  TY++LI G C       A +L   M   G  P+   +  ++   C+N
Sbjct: 361 KEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 420

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              D+A  +L ++ ++ + P+    + L  GL   G+ E A  +F  + ++G
Sbjct: 421 HQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKG 472



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 155/309 (50%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  +   + V+ A   Y EM    ISPNV T + ++  F  +G ++ A+++F  M     
Sbjct: 204 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENI 263

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P V T+N L+ G C  G +        +M K GI+PNV+T+ +L+ G+C   ++++A  
Sbjct: 264 KPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKS 323

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           I   M    V+P++ +YN LI+G+ ++   +   +L++EM    I  D++TYN+LI GLC
Sbjct: 324 ILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLC 383

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K GK   A  LV ++    + P+  TYS+++   C     ++A  L   +   G RPN +
Sbjct: 384 KLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMY 443

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L+   C+    + A  +  ++L K         + +  G  + G  + A+ L  KM
Sbjct: 444 TYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKM 503

Query: 535 EIRGLLPKG 543
           +    +P  
Sbjct: 504 KDNSCIPDA 512



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 141/273 (51%), Gaps = 1/273 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +    K +     F  M   G  P + +    +      + V+ A      M 
Sbjct: 270 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMS 329

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P++ + N+++  FCK+  ++ A+ +FK M     IP V TYN+LI G C  G +S
Sbjct: 330 QRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKIS 389

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K  + M   G+ P++IT+++++   CK  ++ +A  + +++K   + PN+ TY  LI
Sbjct: 390 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILI 449

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  E   +++E++L  G  + + TY  +I G C +G   +A  L+  +  NS +
Sbjct: 450 DGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCI 509

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           P+A TY  +I     +  +++A +L + MI  G
Sbjct: 510 PDAVTYEIIIRSLFDKDENDKAEKL-REMITRG 541


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 181/346 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F ++ K            +   QM + G  P +      +     +  ++     + +M 
Sbjct: 154 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 213

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  N YT  ++++ F K+G+ +  +E+++ M+  G +P+V TYN++I   CN G L+
Sbjct: 214 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 273

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M + G+  NV+T+NTLI G C++ ++ EA R+   MK   +SPN+++YNTLI
Sbjct: 274 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 333

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  +GN +  +SL+ +M  +G    + TYN LI G  +   +     +V++++   L 
Sbjct: 334 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 393

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+       N E+AFQ+Y SM ++G   + +I+ +L+   C   D   A+++
Sbjct: 394 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 453

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + E  + P+ +I + +  G    G    A++L ++M   G++P
Sbjct: 454 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP 499



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 35/292 (11%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            Y++M+   I PNVYT N ++   C  G +  A E+F  M   G   +V TYNTLI G C
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 302

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  +  A +    M+++G+ PN+I++NTLI G+C  G L +A+ +F++MK++  SP++ 
Sbjct: 303 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 362

Query: 370 TYNTLINGYGQVGNS--------EMGA---------------------------SLYEEM 394
           TYN LI G+ +  NS        EM A                            +Y  M
Sbjct: 363 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 422

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            + G+  DI  Y  LI GLC  G  K+A+ L K LD+  L PN   Y+ +I G C   +S
Sbjct: 423 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 482

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
            RA +L K M  +G  PN   +   +   C++E +  A  +L +M+E  + P
Sbjct: 483 YRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKP 534



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 196/409 (47%), Gaps = 9/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSD---SFDLPSKLFDSILYSYRMCDSSP-- 193
           T ++ S +LH+L  +  F  S+S+L  ++      S   PS LF  +   +   DS P  
Sbjct: 24  THQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQPH--LDSFPTH 81

Query: 194 -LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            L+ + +   +   +    A     QM   G +P   + N  L  L+ S   + A   + 
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           E + N +  +VY+  +++   C++G +++  EV   ME MG  P+V  Y TLI G C  G
Sbjct: 142 ETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +    +    M +  +  N  T+  LI GF K G   +   ++ +MK T + PNV TYN
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           ++I      G       L++EM   G+  +++TYN LI GLC+E +  +A  L+  + ++
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L PN  +Y+ LI G C   N ++A  L+  M  SG  P+   + +L++ F + ++    
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 380

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +++ EM  + ++P  +  + L   L      E A +++  ME  GL+ 
Sbjct: 381 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVA 429



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 142/272 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  NA + F +MR+ G    + + N  +  L    RV  A      M+R+ +SPN+ + N
Sbjct: 271 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 330

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  +C +G +++A  +F  M+S G  PS+ TYN LI+G       +        ME  
Sbjct: 331 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 390

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ P+ +T+  L+    +   + +A +I+S M+   +  ++  Y  LI+G   VG+ +  
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           + L++ +    +K + + YN +I G CKEG + +A  L+K++ +N +VPN ++Y++ I  
Sbjct: 451 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXI 510

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            C  +    A  L K MI  G +P+  I+ M+
Sbjct: 511 LCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 542



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 73/160 (45%), Gaps = 1/160 (0%)

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +L + A+I    +    ++A +    +    LVP ++T++ L+         E+A++++ 
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
              +   + + + F +++   C+    D+  EVL +M E  ++P+ ++ + L  G    G
Sbjct: 142 E-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             E   +LF KM    ++   +     IN   + G K+ G
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDG 240


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 205/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P      T+S V+H L K R    +E+ LR +++     LP+   +++++Y
Sbjct: 242 FKEMVQRGIPPDFV--TYSSVVHALCKARAMDKAEAFLRQMVNKGV--LPNNWTYNNLIY 297

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR    LP + + N  + SL    ++
Sbjct: 298 GY-----------------SSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKI 340

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++ N++++ +   G +    ++F  M   G  P + T+N L
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVL 400

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++PNV+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   Y+ LI G+   G+      L  E++ NG+ +DI+ ++++I  LCK G+   A  
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P A  YS L+ G C+    E+A +++ +M+ +G  PN  ++  L++ +
Sbjct: 521 IF-DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML+K + P +I+ + +  GL   G+   A   F +M   G+
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 167/355 (47%), Gaps = 2/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + + N  +        V+ 
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNK 237

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P+  T + V+HA CK   +++A    + M + G +P+  TYN LI 
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M +  I P+V+TFN L+   CK GK+ EA  +F  M     +P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +YN ++NGY   G       L++ ML +GI   I T+N LI      G   KA  + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 417

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + PN  TY+ +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 418 NEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +A E++ E++   M  D ++ S + + L   G+   A  +F      GL P
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 167/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++   YA +    + TD F  M   G  P+I + N  + +  +   +D A+  + EMR
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + PNV T   V+ A C++G ++ A+E F  M   G  P    Y+ LI G C  G L 
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + +  NG+  +++ F+++I   CK G++ +A  IF       + P  V Y+ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ + + Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   Y+ +I G      +  A   +  M  SG   NK  + +++    +N  FD A  +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  D I L+ + +G+    + E A  LF  +   GL+P
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 184/435 (42%), Gaps = 51/435 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++SI+L  L    K   ++ +LR + +  +   P    D + Y+         V D  FK
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP----DVVAYN--------TVIDGFFK 231

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                     A D F +M   G  P   + +  + +L  +  +D A  F ++M    + P
Sbjct: 232 ----EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +T N +++ +   G  + AV VFK M     +P V T+N L+   C  G +  A    
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G  P+V ++N ++ G+  KG L +   +F  M    ++P + T+N LI  Y   
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +    ++ EM  +G+K ++LTY  +I  LC+ GK   A      +    + P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 442 SALITGQCVRKNSERAFQ---------------LYKSMIRSGCR---------------- 470
             LI G C   +  +A +               L+ S+I + C+                
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 471 ----PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
               P   ++ MLM  +C     ++A  V   M+   + P+ ++   L +G    G+ + 
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 527 AMKLFRKMEIRGLLP 541
            + LFR+M  +G+ P
Sbjct: 588 GLSLFREMLQKGIKP 602



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/405 (22%), Positives = 175/405 (43%), Gaps = 75/405 (18%)

Query: 192 SPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +P++  F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+ 
Sbjct: 391 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFC----------------------------------- 274
            + +M    ++P+ Y  + ++  FC                                   
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           KLG +  A  +F    ++G  P+   Y+ L+ G+C  G +  A++  + M   GI+PN +
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            + TL+ G+CK G++ E   +F EM    + P+ + YN +I+G  + G +      + EM
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 630

Query: 395 LRNGI-----------------------------------KVDILTYNALILGLCKEGKT 419
             +GI                                   K+DI+T N +I G+ +  + 
Sbjct: 631 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 690

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           ++A  L   + ++ LVP   TYS +IT        E A  ++ SM  +GC P+  +   +
Sbjct: 691 EEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 750

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHC 521
           +    +  +  RA   L ++ E+  + +   +++L +L+S    C
Sbjct: 751 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTC 795



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/357 (22%), Positives = 169/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      + +  +++ C +       + R ++A
Sbjct: 83  CRSGPALAVALFNRAASRAQGPRVLSPT-----SHTYAILMDCCTR-------AHRPELA 130

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  ++   N ++  FC+    + A+++       +G +P V +Y+ L+ 
Sbjct: 131 LAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 190

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             C++G    A     +M + G    P+V+ +NT+I GF K+G +++A  +F EM    +
Sbjct: 191 SLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 250

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ VTY+++++   +    +   +   +M+  G+  +  TYN LI G    G+ K+A  
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ + S++P+  T++ L+   C     + A  ++ +M   G  P+   + ++++ + 
Sbjct: 311 VFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 370

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +AP     + L     +CG  + AM +F +M   G+ P
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ ++I  N L+ GFC+  +  EA + 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     D++ YN +I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TYS+++   C  +  ++A    + M+  G  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM  + + PD +  + L   L   GK + A  +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 349 TMAMKGQNPDVF 360



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 353 NRIFSEMKATNV-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           NR  S  +   V SP   TY  L++   +    E+  + + ++LR G++VDI+  N L+ 
Sbjct: 95  NRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLK 154

Query: 412 GLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-- 468
           G C+  +T +A   L+    +   VP+  +YS L+   C +  S +A  L + M   G  
Sbjct: 155 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 214

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C P+   +  ++  F +  D ++A ++  EM+++ + PD +  S +   L      + A 
Sbjct: 215 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAE 274

Query: 529 KLFRKMEIRGLLPKGF 544
              R+M  +G+LP  +
Sbjct: 275 AFLRQMVNKGVLPNNW 290



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/199 (22%), Positives = 89/199 (44%), Gaps = 2/199 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++FD+++ +    + + +V+  L   Y    +       F +M   G  P     N  + 
Sbjct: 555 RVFDAMVSAG--IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L ++ R   A   + EM  + I+ N  T ++V+    K    + A+ +FK + +M    
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI 672

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + T NT+I+G      +  A      + ++G+ P V+T++ +I    K+G + EA  +F
Sbjct: 673 DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMF 732

Query: 357 SEMKATNVSPNVVTYNTLI 375
           S M+     P+    N ++
Sbjct: 733 SSMQNAGCEPDSRLLNHVV 751



 Score = 38.9 bits (89), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/159 (19%), Positives = 69/159 (43%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++ +     + F  A   F ++R       I + N  ++ +  + RV+ A   +  + 
Sbjct: 642 YSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS 701

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ + P V T ++++    K G++E A ++F +M++ G  P     N ++     K  + 
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            A  + + +++       +T   L+  F  KG   E  R
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIR 800


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 154/296 (52%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + FC+M   G +P   + +  ++              Y+ M R+ I PN Y  N ++ 
Sbjct: 212 AKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLIS 271

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +C  G++++A +VF  M   G    V TYN LI G C       A+K  + + K G+ P
Sbjct: 272 EYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N++T+N LI GFC  GK+  A R+F+++K++ +SP +VTYNTLI GY +V N      L 
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM    I    +TY  LI    +   T KA  +   ++K+ LVP+  TYS LI G CV 
Sbjct: 392 KEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVN 451

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            N + A + +KS+     +PN  I+  ++  +C+     RA  +L EM+   M P+
Sbjct: 452 GNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPN 507



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 191/420 (45%), Gaps = 9/420 (2%)

Query: 142 THSIVL---HILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS-YRMCDSSPLVFD 197
           +HSI     H+L+     ++   ILR I    S  +PS L   +  + +  C +   ++D
Sbjct: 38  SHSISFILNHLLSSGMLPQAQSLILRLI----SGRIPSSLMLQLTQAHFTSCSTYTPLYD 93

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            +   Y H      A      M   G  P+  + N  L  L+ S   D A   +  ++ +
Sbjct: 94  AIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAWWIFNVLK-S 152

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           ++  N Y+  +++   C+ G   R   +   +E  G  P+V  Y TLI G C  G + LA
Sbjct: 153 KVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLA 212

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 M++ G+ PN  T++ L+ GF K+G   E  +++  M  + + PN   YN LI+ 
Sbjct: 213 KNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISE 272

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y   G  +    ++ EM   GI   ++TYN LI GLC+  K  +A  LV  ++K  L PN
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ LI G C     + A +L+  +  SG  P    +  L++ + + E+   A +++ 
Sbjct: 333 IVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           EM E+C+A   +  + L          + A ++   ME  GL+P  +     I+    NG
Sbjct: 393 EMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNG 452



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 167/323 (51%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           + ++G  P +      +     +  V +A   + +M R  + PN +T +++M+ F K G+
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGL 243

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                ++++NM   G +P+   YN LIS +CN G++  A K    M + GI   V+T+N 
Sbjct: 244 QREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNI 303

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G C+  K  EA ++  ++    +SPN+VTYN LING+  VG  +    L+ ++  +G
Sbjct: 304 LIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSG 363

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   ++TYN LI G  K      A  LVK++++  +  +  TY+ LI        +++A 
Sbjct: 364 LSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKAC 423

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +++  M +SG  P+ + + +L+   C N +   A++    + E  + P+S+I + +  G 
Sbjct: 424 EMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGY 483

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G    A++L  +M   G++P
Sbjct: 484 CKEGSSYRALRLLNEMVHSGMVP 506



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 161/326 (49%), Gaps = 8/326 (2%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
            FK    R+ F+     +  M   G +P   + N  +S   +   VD A   + EMR   
Sbjct: 238 FFKQGLQREGFQ----MYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+  V T N+++   C+      AV++   +  +G  P++ TYN LI+G C+ G +  A+
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  N ++ +G+ P ++T+NTLI G+ K   L  A  +  EM+   ++ + VTY  LI+ +
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAF 413

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++  ++    ++  M ++G+  D+ TY+ LI G C  G  K+A+   K L +  L PN+
Sbjct: 414 ARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNS 473

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   +S RA +L   M+ SG  PN   F   M   C++E +  A  +L +
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQ 533

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKD 524
           M+   + P       LY  +H    D
Sbjct: 534 MINSGLKPS----VSLYKMVHKVKGD 555



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 149/284 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y +      A   F +MR+ G    + + N  +  L   ++   A+    ++ 
Sbjct: 266 YNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVN 325

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +SPN+ T N++++ FC +G ++ AV +F  ++S G  P++ TYNTLI+G+     L+
Sbjct: 326 KVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLA 385

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     ME+  I  + +T+  LI  F +     +A  + S M+ + + P+V TY+ LI
Sbjct: 386 GALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLI 445

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G    GN +  +  ++ +    ++ + + YN +I G CKEG + +A  L+ ++  + +V
Sbjct: 446 HGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMV 505

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           PN +++ + +   C  +  + A  L   MI SG +P+  +++M+
Sbjct: 506 PNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 6/212 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++ G  D    D   +LF+ +    +    SP  + ++ L   Y+  +    A D   +M
Sbjct: 339 LINGFCDVGKMDTAVRLFNQL----KSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEM 394

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            +        +    + +       D A   +  M ++ + P+VYT ++++H  C  G +
Sbjct: 395 EERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNM 454

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A + FK++  M   P+   YNT+I G+C +G    A++  N M  +G+ PNV +F + 
Sbjct: 455 KEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCST 514

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           +   C+  K  EA  +  +M  + + P+V  Y
Sbjct: 515 MGLLCRDEKWKEAELLLGQMINSGLKPSVSLY 546


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 169/343 (49%)

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
            H  ++  A   F +M D G  P + + N  + +L  + +++ A    K M +   SP+ 
Sbjct: 284 CHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDT 343

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           +T N ++  FC  G I+ A ++F +MES G      +YN LI+G+C  G +  A K    
Sbjct: 344 FTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYRE 403

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M    I P VIT+NTL+ G  ++GK+ +A  +F EMK  +++P   TYN L++G  +  +
Sbjct: 404 MMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNH 463

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                 L+  +  +  +  I  +N LI GLCK  K + A  L   L    L PN  TY+ 
Sbjct: 464 LSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTV 523

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           +I G C     E A  L+  M   GC PN   F  LM  FCQN++  +  E+L EM EK 
Sbjct: 524 MIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
            +PD+  +S +   L    K    + L      +G   +G++K
Sbjct: 584 FSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQGQTGRGYEK 626



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 179/353 (50%), Gaps = 6/353 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L    A  K++ +    + +M   G  P   + N  ++   +  +VD  L    EM 
Sbjct: 95  FNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEML 154

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R   SPN  T   ++   C    I  A  + + M  MG+ P+V TY TL++G C  G   
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214

Query: 316 LAMKF-KNLMEKNG-----IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           LA+K  + ++  NG     I+PN++ + T+I   CK G + +   +F EMK   +SP+VV
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            Y+++I+G    G  E    L+ EM+  G+  +++T+N LI  LCK GK ++A +L+K +
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLM 334

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +    P+  TY+ LI G C+    + A  L+ SM   G   +   + +L++ +C++   
Sbjct: 335 IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRM 394

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
             A ++  EM+ K + P  I  + L +GL   GK   A  LF +M++  L P+
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPE 447



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 152/308 (49%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + SL     +D     + EM+   ISP+V   + ++H  C  G  E A  +F  M   G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V T+N LI   C  G +  A     LM + G  P+  T+NTLI GFC +G++ +A 
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F  M++  +  + V+YN LINGY + G       LY EM+   I   ++TYN L+ GL
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            +EGK + A  L  ++  + L P + TY+ L+ G C   +   A +L+  +     +P+ 
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            IF  L+   C+    + A E+   +  + + P+ I  + +  GL   G+ E A  LF  
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543

Query: 534 MEIRGLLP 541
           ME +G  P
Sbjct: 544 MEEKGCAP 551



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 163/354 (46%), Gaps = 6/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L K      +   AT    +M   G+ P + +    L+ L  +    +A+  ++E
Sbjct: 163 VTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222

Query: 254 MRRNR------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           M          I PN+     ++ + CK G+I++  E+F  M+  G  P V  Y+++I G
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C+ G    A    N M   G+ PNV+TFN LI   CK GK+ EAN +   M     SP+
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             TYNTLI+G+   G  +    L+  M   GI+ D ++YN LI G CK G+  +A  L +
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++    ++P   TY+ L+TG         A+ L+  M      P    + +L+   C+N 
Sbjct: 403 EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A E+   +      P   I + L  GL    K E+A +LF ++   GL P
Sbjct: 463 HLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEP 516



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 139/286 (48%), Gaps = 6/286 (2%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P + + N ++ A  K+      + ++K M  +G  P   T N LI+ +CN   +   + 
Sbjct: 89  TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M + G  PN +TF +L+ G C   ++ EA  +  +M      PNVVTY TL+NG  
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208

Query: 380 QVGNSEMGASLYEEMLR-NG-----IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             GN+ +   L+EEML  NG     IK +++ Y  +I  LCK+G   K   L  ++    
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+   YS++I G C     E A  L+  M+  G  PN   F +L+   C+    + A 
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +L  M+++  +PD+   + L  G    G+ + A  LF  ME +G+
Sbjct: 329 HLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 128/261 (49%), Gaps = 4/261 (1%)

Query: 170 DSFDLPSKLFDS----ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           D F L  ++ D+    +    +  ++  + +++L   Y    +   A   + +M     +
Sbjct: 351 DGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM 410

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  L+ L    +V  A   + EM+ + ++P   T N+++   CK   +  A+E+
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMEL 470

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +E+  F PS+  +N LI G C    + +A +  N +   G++PNVIT+  +I G CK
Sbjct: 471 FHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCK 530

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+L  A  +F  M+    +PN+VT+NTL+ G+ Q    +    L +EM       D  T
Sbjct: 531 SGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDAST 590

Query: 406 YNALILGLCKEGKTKKAAYLV 426
            + ++  L K+ K ++  +L+
Sbjct: 591 ISIVVDLLSKDEKYREYLHLL 611


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 176/364 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   + H  +  +A     QM + G+ P   + N  +  L    R   A+     M    
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++ T  +V++  CK G I+ A+ + K ME     P V  YNT+I   CN   ++ A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M+  GI+PNV+T+N+LI   C  G+  +A+R+ S+M    ++PNVVT++ LI+ +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       LY+EM++  I  DI TY++LI G C   +  +A ++ + +      PN 
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  +   +L++ M + G   N   +  L+  F Q  + D A  V  +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + PD +  S L  GL + GK E A+ +F  ++   + P  +     I    + G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 559 KESG 562
            E G
Sbjct: 517 VEDG 520



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 195/423 (46%), Gaps = 21/423 (4%)

Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSS---ESILRGILDSDSFDLPSKLFDSI---- 182
           +  ++ + L L+    +   + K+R F S      +L  I   + FDL   L + +    
Sbjct: 52  ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111

Query: 183 ----LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
               LY+Y           +L   +  R +   A     +M   G+ P I + N  L+  
Sbjct: 112 ISHNLYTY----------SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
               R+  A+    +M      P+ +T N ++H   +      AV +   M   G  P +
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY  +++G C +G + LA+     ME+  I+P V+ +NT+I   C    +++A  +F+E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    + PNVVTYN+LI      G     + L  +M+   I  +++T++ALI    KEGK
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  L  ++ K S+ P+  TYS+LI G C+    + A  +++ MI   C PN   +  
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+  FC+ +  D   E+  EM ++ +  +++  + L  G     + + A  +F++M   G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461

Query: 539 LLP 541
           +LP
Sbjct: 462 VLP 464



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 204/424 (48%), Gaps = 21/424 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSS 192
           S  L T+SI+++   +  +   + ++L  ++    + D   L S L +   +  R+ D+ 
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS-LLNGFCHGNRISDAV 171

Query: 193 PLVFDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
            LV  ++          F T  H      +   A     +M   G  P + +    ++ L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                +D+AL   K+M + +I P V   N ++ A C    +  A+ +F  M++ G  P+V
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN+LI   CN G  S A +  + M +  I PNV+TF+ LI  F K+GKL EA +++ E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M   ++ P++ TY++LING+      +    ++E M+      +++TYN LI G CK  +
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +   L +++ +  LV N  TY+ LI G    +  + A  ++K M+  G  P+   + +
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           L+   C N   + A  V+ E L++  M PD    + +  G+   GK E    LF  + ++
Sbjct: 472 LLDGLCNNGKVETAL-VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530

Query: 538 GLLP 541
           G+ P
Sbjct: 531 GVKP 534



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 170/341 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +     + K   +A + F +M + G  P + + N  +  L +  R   A     +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +I+PNV T + ++ AF K G +  A +++  M      P + TY++LI+G C    
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     LM      PNV+T+NTLI GFCK  ++ E   +F EM    +  N VTY T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ Q    +    ++++M+ +G+  DI+TY+ L+ GLC  GK + A  + + L ++ 
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ +I G C     E  + L+ S+   G +PN   +  +MS FC+    + A 
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  EM E+   PDS   + L       G    + +L R+M
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 158/313 (50%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           L+  ++D A+  + +M ++R  P++   + ++ A  K+   +  + + + M+++G   ++
Sbjct: 57  LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY+ LI+  C +  LSLA+     M K G +P+++T N+L+ GFC   ++ +A  +  +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M      P+  T+NTLI+G  +   +    +L + M+  G + D++TY  ++ GLCK G 
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A  L+K +++  + P    Y+ +I   C  KN   A  L+  M   G RPN   +  
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+   C    +  A+ +L +M+E+ + P+ +  S L       GK   A KL+ +M  R 
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356

Query: 539 LLPKGFDKLRTIN 551
           + P  F     IN
Sbjct: 357 IDPDIFTYSSLIN 369



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 166/338 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L +   +  ++ +A+     M +    P + + +  + + +   ++  A   Y E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+++T + +++ FC    ++ A  +F+ M S    P+V TYNTLI G C    
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +   M+    M + G+  N +T+ TLI GF +  +   A  +F +M +  V P+++TY+ 
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G    G  E    ++E + R+ ++ DI TYN +I G+CK GK +    L   L    
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ +++G C +   E A  L++ M   G  P+   +  L+    ++ D   +A
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           E++ EM       D+  +  + + LH    D+  +K+ 
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D     +  L   +    +   A   F  M      P + + N  + 
Sbjct: 347 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RVD  +  ++EM +  +  N  T   ++H F +    + A  VFK M S G +P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G CN G +  A+     ++++ ++P++ T+N +I G CK GK+ +   +F
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNVVTY T+++G+ + G  E   +L+ EM   G   D  TYN LI    ++
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G    +A L++++     V +AST
Sbjct: 585 GDKAASAELIREMRSCRFVGDAST 608



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   +   D   +LF  +  S R    + + +  L   +   ++  NA   F QM 
Sbjct: 401 TLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP I + +  L  L ++ +V+ AL  ++ ++R+++ P++YT N+++   CK G +E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++F ++   G  P+V TY T++SG C KGL   A      M++ G  P+  T+NTLI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++     +  T   + N
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 178/347 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++ +L   YA R    + TD    M   G  P     N  L +      +D A+  +  M
Sbjct: 411 IYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRM 470

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            ++ +SP+V T  +++ A CKLG ++ AV  F  M + G  P+   +N+L+ G C     
Sbjct: 471 SQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRW 530

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +    M   G++PNV+ FNT++   C +G++  A R+   M+   V PNV++YNTL
Sbjct: 531 EKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTL 590

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+   G ++  A L + M+  G+K D+++Y+ L+ G CK G+   A  L +++ +  +
Sbjct: 591 IGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGV 650

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P A TYS ++ G    +    A +LY +MI+SG + + + + ++++  C+    D A +
Sbjct: 651 TPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFK 710

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   +  K + P+ I  + +   L   G+ + AM LF  +   GL+P
Sbjct: 711 IFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVP 757



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 4/352 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQ-MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           +V + L       K+   A D   + M ++G +P + SCN  L  L + +RV+ AL    
Sbjct: 126 VVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLH 185

Query: 253 EMRRN---RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            M  +     +PNV T N ++   CK   ++RA  V ++M   G    V TY+T+I G C
Sbjct: 186 TMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLC 245

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A      M   G++P+V+T+NT+I G CK   +  A  +   M    V P+VV
Sbjct: 246 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVV 305

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNT+I+G  +    +    + + M+   +K DI TYN LI G    G+ K+    ++++
Sbjct: 306 TYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L P+  TYS L+   C       A +++  MIR G +PN  I+ +L+  +      
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               ++L  M+   ++P++ I + +          + AM +F +M   GL P
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSP 477



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 168/366 (45%), Gaps = 5/366 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYG---FLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           L K   + K+   A +    M + G     P + + N  +  L  ++ VD A G  + M 
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  +V T + ++   CK   ++RA  V ++M   G  P V TYNT+I G C    + 
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   G++P+V+T+NT+I G CK   +  A+ +   M   +V P++ TYN LI
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLI 346

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY   G  +      EEM   G+  D++TY+ L+  LCK GK  +A  +   + +  + 
Sbjct: 347 HGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIK 406

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN + Y  L+ G   R        L   M+ +G  PN +IF +++  + +    D A  +
Sbjct: 407 PNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHI 466

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINCA 553
              M +  ++PD +    L   L   G+ + A+  F +M   G+ P    F+ L    C 
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCT 526

Query: 554 PENGEK 559
            +  EK
Sbjct: 527 VDRWEK 532



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 180/400 (45%), Gaps = 18/400 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ ++  L K +    +E +L+ ++D           D + YS         + D L K
Sbjct: 201 TYNTIIDGLCKAQAVDRAEGVLQHMIDK------GVKLDVVTYS--------TIIDGLCK 246

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
             A  +    A      M D G  P + + N  +  L  ++ VD A G  + M    + P
Sbjct: 247 AQAVDR----AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 302

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V T N ++   CK   ++RA  V ++M      P + TYN LI G+ + G     ++  
Sbjct: 303 DVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRL 362

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   G+ P+V+T++ L+   CK GK  EA +IF  M    + PNV  Y  L++GY   
Sbjct: 363 EEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAAR 422

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L + M+ NGI  +   +N ++    K+    +A ++   + ++ L P+  TY
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             LI   C     + A   +  MI  G  PN  +F  L+   C  + +++A E+  EM +
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + P+ +  + +   L + G+  +A +L   ME  G+ P
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 212/464 (45%), Gaps = 15/464 (3%)

Query: 75  KGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHK 134
           KG  LD V   YS +I    K   A +       ++H++ K  K  V++  + T +    
Sbjct: 228 KGVKLDVVT--YSTIIDGLCK---AQAVDRAEGVLQHMIDKGVKPDVVT--YNTIIDGLC 280

Query: 135 PSSLTLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
            +        ++ H++ K  K    +  +I+ G+  + + D      D +L      D  
Sbjct: 281 KAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA----DGVLQHMIDKDVK 336

Query: 193 PLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           P +  ++ L   Y    +++       +M   G  P + + +  L  L  + +   A   
Sbjct: 337 PDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKI 396

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +  M R  I PNV    +++H +   G I    ++   M + G  P+   +N ++  +  
Sbjct: 397 FYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAK 456

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K ++  AM   + M ++G+ P+V+T+  LI   CK G++ +A   F++M    V+PN V 
Sbjct: 457 KAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVV 516

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +N+L+ G   V   E    L+ EM   G++ +++ +N ++  LC EG+   A  L+  ++
Sbjct: 517 FNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSME 576

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  + PN  +Y+ LI G C+   ++ A QL   M+  G +P+   ++ L+  +C+    D
Sbjct: 577 RVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRID 636

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            A  +  EML K + P ++  S +  GL H  +   A +L+  M
Sbjct: 637 NAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM 680



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 7/304 (2%)

Query: 245 DIALGFYKEMRR---NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ++A+  +  M R   N++ P++ T +++   FC+LG IE     F  +   G+  +    
Sbjct: 69  ELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVI 128

Query: 302 NTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           N L++G C+   +  AM      M + G  PNV++ NTL+ G C + ++ EA  +   M 
Sbjct: 129 NQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMA 188

Query: 361 ---ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
                N +PNVVTYNT+I+G  +    +    + + M+  G+K+D++TY+ +I GLCK  
Sbjct: 189 EDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQ 248

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  +++ +    + P+  TY+ +I G C  +  +RA  + + MI  G +P+   + 
Sbjct: 249 AVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 308

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            ++   C+ +  DRA  VL  M++K + PD    + L  G    G+ +  ++   +M  R
Sbjct: 309 TIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYAR 368

Query: 538 GLLP 541
           GL P
Sbjct: 369 GLDP 372



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 154/325 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L        +  +A   F QM + G  P     N  +  L   +R + A   + E
Sbjct: 480 VTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFE 539

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PNV   N +M   C  G +  A  +  +ME +G  P+V +YNTLI GHC  G 
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR 599

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A +  ++M   G++P++I+++TL+ G+CK G++  A  +F EM    V+P  VTY+T
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++ G            LY  M+++G + DI TYN ++ GLCK     +A  + + L    
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  T++ +I         + A  L+ S+   G  PN   + ++M    Q    D   
Sbjct: 720 LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFD 779

Query: 494 EVLLEMLEKCMAPDSIILSELYSGL 518
            + L M +    PDS++L+ +   L
Sbjct: 780 NLFLAMEKSGCTPDSVMLNAIIRSL 804



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 184/411 (44%), Gaps = 24/411 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           K   L + T+S ++  L K +    +E +L+ ++D           D + Y+        
Sbjct: 228 KGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP------DVVTYN-------- 273

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            + D L K  A  +    A      M D G  P + + N  +  L  ++ VD A G  + 
Sbjct: 274 TIIDGLCKAQAVDR----AEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P++ T N ++H +   G  +  V   + M + G  P V TY+ L+   C  G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            + A K    M + GI+PNV  +  L+ G+  +G + +   +   M A  +SPN   +N 
Sbjct: 390 CTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNI 449

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++  Y +    +    ++  M ++G+  D++TY  LI  LCK G+   A      +  + 
Sbjct: 450 VLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN+  +++L+ G C     E+A +L+  M   G RPN   F  +M   C NE     A
Sbjct: 510 VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLC-NEGQVMVA 568

Query: 494 EVLLEMLEKC-MAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + L++ +E+  + P+ I  + L  G  HC  G+ + A +L   M   GL P
Sbjct: 569 QRLIDSMERVGVRPNVISYNTLIGG--HCLAGRTDEAAQLLDVMVSVGLKP 617



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 163/377 (43%), Gaps = 70/377 (18%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F+++   YA +     A   F +M  +G  P + +    + +L    RVD A+  + +M
Sbjct: 446 IFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQM 505

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             + ++PN    N +++  C +   E+A E+F  M   G  P+V  +NT++   CN+G +
Sbjct: 506 INDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQV 565

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            +A +  + ME+ G++PNVI++NTLI G C  G+  EA ++   M +  + P++++Y+TL
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTL 625

Query: 375 INGYGQVGNSEMGASLYEEMLRNGI----------------------------------- 399
           + GY + G  +    L+ EMLR G+                                   
Sbjct: 626 LRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685

Query: 400 KVDILTYNALILGLCKE-----------------------------------GKTKKAAY 424
           + DI TYN ++ GLCK                                    G+ K A  
Sbjct: 686 QWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMD 745

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L   +  + LVPN  TY  ++         +    L+ +M +SGC P+  +   ++ +  
Sbjct: 746 LFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLL 805

Query: 485 QNEDFDRAAEVLLEMLE 501
              +  RA   L ++ E
Sbjct: 806 GRGEIMRAGAYLSKIDE 822



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 158/351 (45%), Gaps = 41/351 (11%)

Query: 147 LHILTKNRKFK-SSESILRGILDSDSFDLPSKLFDSILYSYRMCDS----SPLVFDLLFK 201
           +HI ++  +   S + +  GIL  D+     ++ D++L   +M +     + +VF+ L  
Sbjct: 464 MHIFSRMSQHGLSPDVVTYGIL-IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVY 522

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 ++  A + F +M D G  P +   N  + +L +  +V +A      M R  + P
Sbjct: 523 GLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRP 582

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN----------- 310
           NV + N ++   C  G  + A ++   M S+G  P + +Y+TL+ G+C            
Sbjct: 583 NVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLF 642

Query: 311 -----KGLLSLAMKFKNLME-------------------KNGIQPNVITFNTLIFGFCKK 346
                KG+   A+ +  +++                   K+G Q ++ T+N ++ G CK 
Sbjct: 643 REMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKT 702

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             + EA +IF  + + ++ PN++T+  +I+   + G  +    L+  +  +G+  +++TY
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             ++  + +EG   +   L   ++K+   P++   +A+I     R    RA
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 115/239 (48%), Gaps = 6/239 (2%)

Query: 213 TDTFCQMRDY----GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           TD   Q+ D     G  P + S +  L     + R+D A   ++EM R  ++P   T + 
Sbjct: 600 TDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYST 659

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKN 327
           ++           A E++ NM   G    + TYN +++G C    +  A K F++L  K+
Sbjct: 660 ILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKD 719

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            ++PN+ITF  +I    K G+  +A  +F+ + +  + PNVVTY  ++    Q G  +  
Sbjct: 720 -LRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEF 778

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
            +L+  M ++G   D +  NA+I  L   G+  +A   +  +D+ +    AST S LI+
Sbjct: 779 DNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 8/241 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S +++LRG   +   D    LF  +L   +      + +  + +   H ++F  A + + 
Sbjct: 621 SYDTLLRGYCKTGRIDNAYCLFREMLR--KGVTPGAVTYSTILQGLFHTRRFSEAKELYL 678

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G    I + N  L+ L  +  VD A   ++ +    + PN+ T  +++    K G
Sbjct: 679 NMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGG 738

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL---MEKNGIQPNVI 334
             + A+++F ++ S G +P+V TY  ++     +GLL    +F NL   MEK+G  P+ +
Sbjct: 739 RKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLD---EFDNLFLAMEKSGCTPDSV 795

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
             N +I     +G++  A    S++   N S    T + LI+ + +        SL E+ 
Sbjct: 796 MLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSLPEKY 855

Query: 395 L 395
           L
Sbjct: 856 L 856


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 181/346 (52%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F ++ K            +   QM + G  P +      +     +  ++     + +M 
Sbjct: 167 FGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMG 226

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  N YT  ++++ F K+G+ +  +E+++ M+  G +P+V TYN++I   CN G L+
Sbjct: 227 ELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLN 286

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M + G+  NV+T+NTLI G C++ ++ EA R+   MK   +SPN+++YNTLI
Sbjct: 287 NAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLI 346

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  +GN +  +SL+ +M  +G    + TYN LI G  +   +     +V++++   L 
Sbjct: 347 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLS 406

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+       N E+AFQ+Y SM ++G   + +I+ +L+   C   D   A+++
Sbjct: 407 PSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKL 466

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + E  + P+ +I + +  G    G    A++L ++M   G++P
Sbjct: 467 FKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVP 512



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 147/292 (50%), Gaps = 35/292 (11%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            Y++M+   I PNVYT N ++   C  G +  A E+F  M   G   +V TYNTLI G C
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLC 315

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  +  A +    M+++G+ PN+I++NTLI G+C  G L +A+ +F++MK++  SP++ 
Sbjct: 316 QERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLA 375

Query: 370 TYNTLINGYGQVGNS--------EMGA---------------------------SLYEEM 394
           TYN LI G+ +  NS        EM A                            +Y  M
Sbjct: 376 TYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSM 435

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            + G+  DI  Y  LI GLC  G  K+A+ L K LD+  L PN   Y+ +I G C   +S
Sbjct: 436 EKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSS 495

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
            RA +L K M  +G  PN   +   +   C++E +  A  +L +M+E  + P
Sbjct: 496 YRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKP 547



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 197/409 (48%), Gaps = 9/409 (2%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSD---SFDLPSKLFDSILYSYRMCDSSP-- 193
           T ++ S +LH+L  +  F  S+S+L  ++      S   PS LF  +   +   DS P  
Sbjct: 37  THQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELTQPH--LDSFPTH 94

Query: 194 -LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            L+ + +   +   +    A   F QM   G +P   + N  L  L+ S   + A   + 
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           E + N +  +VY+  +++   C++G +++  EV   ME MG  P+V  Y TLI G C  G
Sbjct: 155 ETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +    +    M +  +  N  T+  LI GF K G   +   ++ +MK T + PNV TYN
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           ++I      G       L++EM   G+  +++TYN LI GLC+E +  +A  L+  + ++
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L PN  +Y+ LI G C   N ++A  L+  M  SG  P+   + +L++ F + ++    
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGV 393

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +++ EM  + ++P  +  + L   L      E A +++  ME  GL+ 
Sbjct: 394 TDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVA 442



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 142/272 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  NA + F +MR+ G    + + N  +  L    RV  A      M+R+ +SPN+ + N
Sbjct: 284 KLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYN 343

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  +C +G +++A  +F  M+S G  PS+ TYN LI+G       +        ME  
Sbjct: 344 TLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEAR 403

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ P+ +T+  L+    +   + +A +I+S M+   +  ++  Y  LI+G   VG+ +  
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           + L++ +    +K + + YN +I G CKEG + +A  L+K++ +N +VPN ++Y++ I  
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQI 523

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            C  +    A  L K MI  G +P+  I+ M+
Sbjct: 524 LCKDEKWTEAEVLLKDMIELGLKPSISIWNMI 555



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/160 (20%), Positives = 73/160 (45%), Gaps = 1/160 (0%)

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +L + A+I    +    ++A +    +    LVP ++T++ L+         E+A++++ 
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
              +   + + + F +++   C+    D+  EVL +M E  ++P+ ++ + L  G    G
Sbjct: 155 E-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             E   +LF KM    ++   +     IN   + G K+ G
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDG 253


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 11/439 (2%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           +L P  ++ V+ +++ +   +L FF W +        +++   + H+L ++R F  +  +
Sbjct: 52  NLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRV 111

Query: 163 L-RGILDSDSFDLPSKLFDSILYSYRMCDSSP-LVFDLLFKTYAHRKKFRNATDTFCQMR 220
             R +    + ++  +   S    +R   S+P  V+  L   Y        A DTF  M 
Sbjct: 112 FDRMVGQFGNLEVLGEFHGS----FRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMS 167

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G      + ++ L  L+DS+R+D+ L  Y+EM +      VY    V ++F K G +E
Sbjct: 168 KMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGL---GVYEF--VFNSFLKRGEVE 222

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           + +   + +   G +P +   N ++ G C    + +A  F ++M ++G  PN++TF+TLI
Sbjct: 223 KGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLI 282

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             +CK+ +L EA  +++ M    + P++V Y+ LING  + G  E G SL+   L  G+K
Sbjct: 283 NVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVK 342

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D++ +++++    + G   KA  +   + K  + PN  TYS LI G C       A  +
Sbjct: 343 MDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGV 402

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +++ G  P+   +  L+  FC++E+      +   ML K   PD ++ S L +GL  
Sbjct: 403 FGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSR 462

Query: 521 CGKDELAMKLFRKMEIRGL 539
            G  + A++ F +   RGL
Sbjct: 463 QGMMDEALRFFFQAVKRGL 481



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 151/283 (53%), Gaps = 8/283 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS--ERVDIALGF- 250
           + + +L K  A + +   A   F Q+   GF P     +    +L+D   ++ D A G  
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD----HIIYCTLIDGFCKKRDPATGLQ 576

Query: 251 -YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +K M+ N I P++   N++++ F + G +E  +E+ + +   G  P + TYNT+I G+C
Sbjct: 577 IFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYC 636

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +  + S A+K   +++    QPN ITF  LI  +CK G++ +A  IFS M      PN++
Sbjct: 637 SLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNIL 696

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+ LI+GY +  N+E    LYE+ML + +  +I++Y+ LI GLCK+G  ++A+   +  
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA 756

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
               L+P+   Y  LI G C       A  LY  M+ +G  P+
Sbjct: 757 IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 191/401 (47%), Gaps = 14/401 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYR-MCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  +L  ++DSD  D+       IL +Y  MC     V++ +F ++  R +     +  
Sbjct: 177 AASEMLDLLIDSDRIDV-------ILENYEEMCKGLG-VYEFVFNSFLKRGEVEKGLNFH 228

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             + + G +P I  CNK L  L    ++ +A  F+  M R+  SPN+ T + +++ +CK 
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++ A  ++  M   G +P +  Y+ LI+G    G L       ++    G++ +V+ F
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++++  + + G L +A  +++ M    +SPNVVTY+ LING  + G       ++ ++L+
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G++  +LTY++LI G CK    +    L   + +   VP+    S LI G   +   + 
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A + +   ++ G   N ++F  L+    + +      ++ + M    + PD +  + L  
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           GL   G+ + A+ LF +     LL KGF     I C   +G
Sbjct: 529 GLAEQGRLDEALALFFQ-----LLKKGFSPDHIIYCTLIDG 564



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 163/352 (46%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S L +  L   +   +  R+    +  M   G +P +  C+  ++ L     +D AL 
Sbjct: 412 EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALR 471

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F+ +  +  ++ N Y  N ++    +L      ++++  M     IP V TY  L+ G  
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A+     + K G  P+ I + TLI GFCKK       +IF  M++  + P++ 
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            YN LIN + + G  E    L  E+++ G++ DI+TYN +I G C      KA  L + L
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 PNA T++ LI   C     + A  ++ SM+  G  PN   +  L+  + + E+ 
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + A E+  +ML   ++P+ +  S L  GL   G  E A   F+    R LLP
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLP 763



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 156/333 (46%), Gaps = 7/333 (2%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           F  A      + +Y F  +I+ C + L    D  ++ I +G YK      + P+V T  +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFR-LKRTRDGLKMYILMGMYK------VIPDVVTYTV 525

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++    + G ++ A+ +F  +   GF P    Y TLI G C K   +  ++   LM+ NG
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG 585

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           I P++  +N LI  F ++G +     +  E+    + P++VTYNT+I GY  +       
Sbjct: 586 IFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAI 645

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L+E +     + + +T+  LI   CK+G+   A  +   + +    PN  TYS LI G 
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGY 705

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
              +N+E AF+LY+ M+     PN   + +L+   C+    + A+      + + + PD 
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDV 765

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           I    L  G    G+   AM L+  M + G++P
Sbjct: 766 IAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 178/389 (45%), Gaps = 6/389 (1%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNA 212
           K      IL+G+   +   + S  FD ++ S      SP  + F  L   Y    +   A
Sbjct: 239 KIVDCNKILKGLCMGNQIGVASDFFDMMVRS----GPSPNLVTFSTLINVYCKELRLDEA 294

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              +  M + G +P +   +  ++ L  + +++     +       +  +V   + +M A
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           + ++G + +A+EV+  M   G  P+V TY+ LI+G C  G +  A      + K G++P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T+++LI GFCK   L +   ++  M      P+VV  + LING  + G  +     + 
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           + ++ G+ ++   +NALI G  +  +T+    +   +    ++P+  TY+ L+ G   + 
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             + A  L+  +++ G  P+  I+  L+  FC+  D     ++   M    + PD  I +
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L +     G  E  ++L R++   GL P
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEP 623



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 142/289 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  Y  M +  ISPNV T +++++  C+ G +  A  VF  +   G  PSV TY++LI 
Sbjct: 364 AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    L        +M + G  P+V+  + LI G  ++G + EA R F +     ++ 
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N   +N LI+G  ++  +  G  +Y  M    +  D++TY  L+ GL ++G+  +A  L 
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L K    P+   Y  LI G C +++     Q++K M  +G  P+  I+ +L++ F + 
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFRE 603

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
              +   E+L E+++  + PD +  + +  G         A+KLF  ++
Sbjct: 604 GCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 41/233 (17%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L   +       N  +   ++  YG  P I + N  +      +    A+  ++ +
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH------ 308
           +  R  PN  T  +++ A+CK G ++ A+ +F +M   G  P++ TY+ LI G+      
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 309 -----------------------------CNKGLLSLA-MKFKNLMEKNGIQPNVITFNT 338
                                        C KGL+  A + F+  + ++ + P+VI +  
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRH-LLPDVIAYGI 770

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           LI G+CK G+L EA  ++  M    + P+    + L     + G  +  AS+Y
Sbjct: 771 LIRGYCKVGRLAEAMMLYDHMLVNGIMPD----DLLQKALAEYGFQDSQASIY 819


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 138/545 (25%), Positives = 238/545 (43%), Gaps = 60/545 (11%)

Query: 74  PKGQDLDFVNIAYSHLIHSDWKKLTALS---THLTPFRVKHVLLKVQ-KDYVLSLEFFTW 129
           P  + L+F       L  ++WK +   S   + L P  ++ VL + Q  D    L+FF W
Sbjct: 34  PTSETLNFSQQISDFLKQNNWKTIMVSSHIPSKLNPDVIRAVLHQNQVGDPKRLLDFFYW 93

Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR-M 188
            Q+       L++ SI+   L  +  F  +  +L  ++ +      S + DS+L+ +R  
Sbjct: 94  SQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSS--SSILDSVLFWFRNY 151

Query: 189 CDSSPLVFDLLFK--------------------------------------------TYA 204
             SSP+VFD+L                                              TY 
Sbjct: 152 GGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYT 211

Query: 205 H---------RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +          K+   A  TF +M+  G  P   +C+  +   +    +D  L     M 
Sbjct: 212 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 271

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I  N+ T N+++H  CK G +E+A E+ K M ++G  P+  T+  LI G+C +  + 
Sbjct: 272 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG 331

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++  + MEK  + P+ +++  +I G C    L  AN++  +M  + + PNVV Y+TLI
Sbjct: 332 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 391

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY   G  E    L + M  +G+  DI  YNA+I  L K GK ++A+  + ++    L 
Sbjct: 392 MGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLK 451

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A T+ A I G         A + +  M+  G  PN  ++ +L++   +  +   A  +
Sbjct: 452 PDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSI 511

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
              +    + PD    S    GL   G+ + A+K+F +++ +GL+P  F     I+   +
Sbjct: 512 FRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCK 571

Query: 556 NGEKE 560
            GE E
Sbjct: 572 QGEVE 576



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 195/407 (47%), Gaps = 3/407 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+       L +KL + + +S      + +V+  L   YA   +   A     
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFS--GLKPNVVVYSTLIMGYASEGRIEEARRLLD 408

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P I   N  +S L  + +++ A  +  E++   + P+  T    +  + K G
Sbjct: 409 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 468

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + F  M   G +P+   Y  LI+GH   G L  A+     +   G+ P+V T +
Sbjct: 469 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCS 528

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             I G  K G++ EA ++FSE+K   + P+V TY++LI+G+ + G  E    L++EM   
Sbjct: 529 AFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 588

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI  +I  YNAL+ GLCK G  ++A  L   + +  L P++ TYS +I G C  +N   A
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 648

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F L+  M   G +P+  ++  L+   C+  D ++A  +  EML+K  A  ++  + L  G
Sbjct: 649 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDG 707

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
                K + A +LF++M  + ++P        I+   + G+ E   L
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 754



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 192/409 (46%), Gaps = 22/409 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           + L T+++++H L K  K + +  IL+G++                     C  +   F 
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLG------------------CKPNSRTFC 318

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL + Y        A +   +M     +P   S    ++ L   + + +A    ++M  +
Sbjct: 319 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 378

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PNV   + ++  +   G IE A  +   M   G  P +  YN +IS     G +  A
Sbjct: 379 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 438

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             +   ++  G++P+ +TF   I G+ K GK+ EA + F EM    + PN   Y  LING
Sbjct: 439 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 498

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           + + GN     S++  +   G+  D+ T +A I GL K G+ ++A  +  +L +  LVP+
Sbjct: 499 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPD 558

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TYS+LI+G C +   E+AF+L+  M   G  PN  I+  L+   C++ D  RA ++  
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFD 618

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            M EK + PDS+  S +  G  +C  + +  A  LF +M  +G+ P  F
Sbjct: 619 GMPEKGLEPDSVTYSTMIDG--YCKSENVAEAFSLFHEMPSKGVQPHSF 665



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 174/368 (47%), Gaps = 34/368 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + + A   F ++++ G +P + + +  +S       V+ A   + EM    I+PN++  N
Sbjct: 539 RVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYN 598

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G I+RA ++F  M   G  P   TY+T+I G+C    ++ A    + M   
Sbjct: 599 ALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSK 658

Query: 328 GIQPN----------------------------------VITFNTLIFGFCKKGKLHEAN 353
           G+QP+                                   ++FNTLI G+CK  K+ EA+
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 718

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F EM A  + P+ VTY T+I+ + + G  E    L++EM    + VD +TY +L+ G 
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGY 778

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            K G++ +   L + +    + P+  TY  +I   C   N   AF+L   ++  G     
Sbjct: 779 NKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKG 838

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            I ++L++  C+ ED   A+++L EM E  + P     S L    H  GK + A ++F  
Sbjct: 839 TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEG 898

Query: 534 MEIRGLLP 541
           ++  GL+P
Sbjct: 899 VKSLGLVP 906



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 156/324 (48%), Gaps = 1/324 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            +++ L          + A   F  M + G  P   + +  +     SE V  A   + E
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N ++H  CK G +E+A+ +F+ M   GF  +++ +NTLI G+C    
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCK 713

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M    I P+ +T+ T+I   CK GK+ EAN +F EM+  N+  + VTY +
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 773

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ GY ++G S    +L+E+M+  G+K D +TY  +I   CKE    +A  L  ++    
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 833

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++   + +  LIT  C R++   A +L   M   G +P+      L+ +F +    D A 
Sbjct: 834 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 893

Query: 494 EVLLEMLEKCMAPDSIILSELYSG 517
            V   +    + PD+  L +L +G
Sbjct: 894 RVFEGVKSLGLVPDTTTLIDLVNG 917



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 142/313 (45%), Gaps = 5/313 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  S       KLFD +    +  +   + +  +   Y   +    A   F +M 
Sbjct: 599 ALVDGLCKSGDIQRARKLFDGM--PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P     N  +        ++ A+  ++EM +   +  + + N ++  +CK   I+
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQ 715

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTL 339
            A ++F+ M +   +P   TY T+I  HC  G +  A + FK + E+N I  + +T+ +L
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI-VDTVTYTSL 774

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++G+ K G+  E   +F +M A  V P+ VTY  +I  + +  N      L +E++  G+
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
                 ++ LI  LCK     +A+ L+ ++ +  L P+ +  S L+         + A +
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 460 LYKSMIRSGCRPN 472
           +++ +   G  P+
Sbjct: 895 VFEGVKSLGLVPD 907



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 1/272 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V++ L            A + F +M   GF   + S N  +     S ++  A   ++E
Sbjct: 665 FVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQE 723

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +I P+  T   V+   CK G +E A  +FK M+    I    TY +L+ G+   G 
Sbjct: 724 MIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQ 783

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S        M   G++P+ +T+  +I+  CK+  L EA ++  E+    +      ++ 
Sbjct: 784 SSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 843

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI    +  +    + L +EM   G+K  +   + L+    + GK  +A  + + +    
Sbjct: 844 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 903

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           LVP+ +T   L+ G     +SE A  L K ++
Sbjct: 904 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  178 bits (452), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 198/399 (49%), Gaps = 8/399 (2%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKT 202
           + +   ILT+ +    + S+L+  L    F   S +F S+L +   CDS+PLVFDLL   
Sbjct: 107 YCMAAQILTQAKMHSQAMSLLKH-LAMTGFSC-SAVFSSLLCTISRCDSNPLVFDLLVNA 164

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y   K+  +A+     M + GF     +CN  L++L++         F KE    +   +
Sbjct: 165 YVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLD 224

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T N+V+++ C  G ++ A  +   M+S   +P+V TYNT++  +  KG    AM    
Sbjct: 225 VTTCNIVLNSMCIEGNLKGAKHMIHKMKSCS-LPNVITYNTILHWYVKKGRFKAAMCVLE 283

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            MEKNG++ +V T+N +I   CK  +   A  +   M+  N++P+  TYNTLI G+    
Sbjct: 284 DMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDES 343

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              +   ++ EMLR G+K  + TY  LI G C+ G   +A  ++ ++    + P+  TYS
Sbjct: 344 KMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYS 403

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           A++ G     +   AF +Y +M + GC P+ + +  L+   C+     +A E +  ++  
Sbjct: 404 AMLNG-----SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHI 458

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A D   L+ L  G+ + G  + A+ L  KM     +P
Sbjct: 459 PSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIP 497



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 162/350 (46%), Gaps = 44/350 (12%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  + +   +D AL   ++M      P+++T  +++  FC+ G I  AV + + M  
Sbjct: 468 NALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLE 527

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            G +P + TY  L+ G   +G +  A   F+ ++ K G+  + I +N+++ G+ K GKLH
Sbjct: 528 KGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLH 587

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +      +M    V PN  +YN L++G+ + G+      LY++M+R GIK   +TY  LI
Sbjct: 588 KVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLI 647

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSL------------------------------------ 434
           LGL K G  + A   VK LDK  L                                    
Sbjct: 648 LGLSKHGMIEIA---VKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWL 704

Query: 435 --VPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              P++ TYSA+I G  +RKN  + +  + + M+ SG  P    +  L++  C+  D + 
Sbjct: 705 YMSPSSKTYSAMINGL-IRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDING 763

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM    + P  +  S +  GL  CGK E  + +F  +   G++P
Sbjct: 764 AFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVP 813



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 151/335 (45%), Gaps = 41/335 (12%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP + + N  L   +   R   A+   ++M +N +  +VYT N+++   CK+     A  
Sbjct: 256 LPNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYL 315

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + K M      P   TYNTLI G  ++  + LA+   N M + G++P++ T+ TLI G+C
Sbjct: 316 LLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYC 375

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G + EA R+  EM+   V P+ VTY+ ++NG     +     S+Y+ M + G   D+ 
Sbjct: 376 RNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDVY 430

Query: 405 TY-----------------------------------NALILGLCKEGKTKKAAYLVKDL 429
           TY                                   NAL+LG+C  G   +A  L + +
Sbjct: 431 TYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKM 490

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
              + +P+  TY+ L++G C +     A  L + M+  G  P+   +  L+    +    
Sbjct: 491 VTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQV 550

Query: 490 DRAAEVLLEML-EKCMAPDSIILSELYSGLHHCGK 523
             A+ +  E++ ++ M  D I  + + +G    GK
Sbjct: 551 KAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGK 585



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 150/292 (51%), Gaps = 6/292 (2%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           +M +N++ PN  + N++MH   K G + R++ ++K+M   G  P+  TY  LI G    G
Sbjct: 595 DMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHG 654

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           ++ +A+KF + M   GI P+ ++F+ LI  F +K ++ +A ++F+ MK   +SP+  TY+
Sbjct: 655 MIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYS 714

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            +ING  +    +    +  +M+ +G++     Y ALI   C+ G    A  L +++   
Sbjct: 715 AMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTAL 774

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            +VP     S+++ G       E    ++ S+IR+G  P    F  LM   C+      A
Sbjct: 775 GIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDA 834

Query: 493 AEVLLEMLEKC-MAPDSIILSELYSGLH--HCGKDELAMKLFRKMEIRGLLP 541
              L  ++E C +  D +  + L +GL    C  D  A++L+ +M+ +GL P
Sbjct: 835 LH-LKSLMESCGLKIDVVTYNVLITGLCKIQCVSD--ALELYEEMKSKGLRP 883



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/385 (23%), Positives = 164/385 (42%), Gaps = 1/385 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+G++        S LF  I+    M  +  + ++ +   Y    K      T   M  
Sbjct: 540 LLKGLIKEGQVKAASYLFQEIICKEGM-YADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQ 598

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P   S N  +   +    +  ++  YK+M R  I P   T  +++    K G+IE 
Sbjct: 599 NKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEI 658

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV+    M   G  P   +++ LI+    K  +S A++  N M+   + P+  T++ +I 
Sbjct: 659 AVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMIN 718

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G  +K  L  +  +  +M  + + P    Y  LIN   + G+      L EEM   GI  
Sbjct: 719 GLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVP 778

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
             +  ++++ GL K GK ++   +   + +  +VP  +T++ L+ G C       A  L 
Sbjct: 779 AEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLK 838

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G + +   + +L++  C+ +    A E+  EM  K + P+    + L   ++  
Sbjct: 839 SLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGT 898

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDK 546
           G+     KL   +E RGL+P   D+
Sbjct: 899 GRTLEGEKLLNDIEDRGLVPSYTDQ 923


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/374 (31%), Positives = 180/374 (48%), Gaps = 7/374 (1%)

Query: 174 LPSK---LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM---RDYGFLPI 227
           LP K   LFD +   +  C  +   F+ +         F  A + +  +   +     P 
Sbjct: 140 LPEKAVDLFDRMACEFE-CKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPN 198

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + + N  + ++     VD A+  +++M   +  P+VYT   +M   CK   I+ AV +  
Sbjct: 199 VLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLD 258

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M+  G  PS  T+N LI+G C KG LS A K  + M   G  PN +T+NTLI G C KG
Sbjct: 259 EMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKG 318

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A  +   M ++   PNVVTY T+ING  + G +  GA +   M   G  V+   Y+
Sbjct: 319 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYS 378

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI GL KEGK+++A +L K++       N   YSA+I G C     + A ++   M   
Sbjct: 379 TLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNK 438

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC PN +    LM  F +  +  RA EV  +M +     + +  S L  GL   GK + A
Sbjct: 439 GCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 498

Query: 528 MKLFRKMEIRGLLP 541
           M ++ +M  +G  P
Sbjct: 499 MMVWTQMLGKGCKP 512



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 3/387 (0%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRN 211
           R  KS  S+L  I+    F    + ++ ++ + +    SP  L F+L+ K         +
Sbjct: 159 RTGKSFNSVLNVIIQEGLFHRALEFYNHVIGA-KGVSISPNVLTFNLVIKAMCKVGLVDD 217

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M      P + +    +  L  ++R+D A+    EM+ +   P+  T N++++
Sbjct: 218 AIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 277

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G + RA ++  NM   G IP+  TYNTLI G C KG L  A+   + M  +   P
Sbjct: 278 GLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 337

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+T+ T+I G  K+G+  +   + + M+      N   Y+TLI+G  + G S+    L+
Sbjct: 338 NVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLF 397

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM   G +++ + Y+A+I GLC++GK   A  ++ ++      PNA T S+L+ G    
Sbjct: 398 KEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEA 457

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            NS RA +++K M +     N+  + +L+   C++     A  V  +ML K   PD +  
Sbjct: 458 GNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAY 517

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRG 538
           S + +GL   G  E AM+L+ +M  +G
Sbjct: 518 SSMINGLSIAGLVEDAMQLYNEMLCQG 544



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 13/389 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +D  D    L D +      C  SP+ F++L      +     A      M 
Sbjct: 239 TLMDGLCKADRIDEAVSLLDEM--QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMF 296

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +  L    +++ A+     M  ++  PNV T   +++   K G   
Sbjct: 297 LKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 356

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
               V   ME  G+  +   Y+TLISG   +G    AM     M   G + N I ++ +I
Sbjct: 357 DGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVI 416

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C+ GK  +A  + SEM     +PN  T ++L+ G+ + GNS     ++++M ++   
Sbjct: 417 DGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFT 476

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + + Y+ LI GLCK+GK K+A  +   +      P+   YS++I G  +    E A QL
Sbjct: 477 QNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQL 536

Query: 461 YKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSEL 514
           Y  M+  G   +P+   + +L++T C+     RA ++L  ML++   PD    +I L  L
Sbjct: 537 YNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596

Query: 515 YSGLH--HCGK---DELAMKLFRKMEIRG 538
              L     G+   DEL ++L ++  + G
Sbjct: 597 REKLDPPQDGREFLDELVVRLLKRQRVLG 625



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 26/273 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+  +        K  +A +   +M + G  P   +C+  +    ++     A+  +K+
Sbjct: 410 IVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKD 469

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M ++  + N    ++++H  CK G ++ A+ V+  M   G  P V  Y+++I+G    GL
Sbjct: 470 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGL 529

Query: 314 LSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           +  AM+  N M   G   QP+V+T+N L+   CK+  +  A  + + M      P++VT 
Sbjct: 530 VEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVT- 588

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT-----YNALILGLCKEGKTKKAAYLV 426
                            +++  MLR   K+D         + L++ L K  +   A+ +V
Sbjct: 589 ----------------CTIFLRMLRE--KLDPPQDGREFLDELVVRLLKRQRVLGASKIV 630

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + + +  L P  ST++ ++   C  K  +   Q
Sbjct: 631 EVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQ 663


>gi|410109917|gb|AFV61038.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
           diamantinensis]
          Length = 284

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 153/282 (54%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +F +IL +     S   VF  L   Y       +A + +   R++      ++C K L  
Sbjct: 2   VFAAILETKGTQRSDIYVFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEH 61

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L+  +   +  GFY+E+       ++Y  N++MH FCK G I  A  VF  +   G  PS
Sbjct: 62  LMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPS 121

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V +YNTL++G+   G L    + K+ M  +G+QP+V +++ LI G CK+ K+ +AN +F 
Sbjct: 122 VVSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFD 181

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    ++PN VT+ TLI+G+ + G  ++   +Y+ ML   +  D++TYN LI GLCK+G
Sbjct: 182 EMLVKGLAPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKG 241

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             K+A  L+ ++    L P+  TY+ LI G C   N + AF+
Sbjct: 242 DLKQANDLIDEMGMKGLKPDKITYTTLIDGCCKEGNLDTAFE 283



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/258 (29%), Positives = 129/258 (50%), Gaps = 4/258 (1%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFK-NMESMGFIPSVTTYNTLISGHCNK-GLLSLAMK 319
           ++Y  + ++ A+ + G    A+E ++   E   ++P  T    L   H  K     L   
Sbjct: 16  DIYVFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVL--EHLMKLKYFKLVWG 73

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F   + + G   ++  FN L+  FCK G +  A  +F  +    + P+VV+YNTL+NGY 
Sbjct: 74  FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYX 133

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G+ + G  L   ML +G++ D+ +Y+ LI GLCKE K   A  L  ++    L PN  
Sbjct: 134 RLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDEMLVKGLAPNGV 193

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           T++ LI G C +   + A ++YK M+     P+   +  L+   C+  D  +A +++ EM
Sbjct: 194 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 253

Query: 500 LEKCMAPDSIILSELYSG 517
             K + PD I  + L  G
Sbjct: 254 GMKGLKPDKITYTTLIDG 271



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 112/225 (49%), Gaps = 5/225 (2%)

Query: 320 FKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           F  ++E  G Q  ++  F+ LI  + + G  H+A   +   +   +     T   ++   
Sbjct: 3   FAAILETKGTQRSDIYVFSGLITAYLESGFXHDAIECYRLTREHKLWVPFDTCRKVLEHL 62

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++   ++    YEE+L  G    +  +N L+   CK+G  + A  +   + K  L P+ 
Sbjct: 63  MKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSV 122

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ L+ G     + +  F+L  +M+ SG +P+ + + +L++  C+    D A E+  E
Sbjct: 123 VSYNTLMNGYXRLGDLDEGFRLKSAMLASGVQPDVYSYSVLINGLCKESKMDDANELFDE 182

Query: 499 MLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           ML K +AP+ +  + L  G  HC  G+ +LAM+++++M  + LLP
Sbjct: 183 MLVKGLAPNGVTFTTLIDG--HCKKGRVDLAMEIYKRMLSQSLLP 225


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 170/320 (53%), Gaps = 1/320 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR Y  +P + + N  +  L        A+ + + M      P+ +T N ++  +CK+ +
Sbjct: 247 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A E+ K+    GF+P   TY +LI+G C +G +  A++  N  +  GI+P+++ +N+
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G C +G +  A ++ +EM      P++ TYN +ING  ++GN      +  + +  G
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D+ T+N LI G CK  K   A  LV+ + +  + P+  TY++++ G C         
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + ++ MI  GC PN   + +L+  FC++   + A++V+++M ++ + PD++  + L  G 
Sbjct: 486 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 545

Query: 519 HHCGKDELAMKLFRKMEIRG 538
              G  E A  LF+K+E +G
Sbjct: 546 CRNGDLEGAYLLFQKLEEKG 565



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 164/336 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F + +  G  P I   N  +  L     +  AL    EM      P++ T N+V++
Sbjct: 344 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G I  A  V  +    G++P V T+NTLI G+C +  L  A++    M + GI P
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 463

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + IT+N+++ G CK GK++E N  F EM      PN +TYN LI  + +    E  + + 
Sbjct: 464 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 523

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M + G+  D +++N LI G C+ G  + A  L + L++      A T++ LI     +
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 583

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N   A +++  M+  G R + + + +L+   C+  + DRA   L+EM++K   P     
Sbjct: 584 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
             + + L    +   A+ +   M   G++P+  D +
Sbjct: 644 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTI 679



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 4/376 (1%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKT----YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +++ Y  RM +   L  D  + T    Y      + AT+        GF+P   +    +
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 332

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     V+ AL  + E +   I P++   N ++   C  G+I  A++V   M   G  
Sbjct: 333 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 392

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + TYN +I+G C  G +S A    N     G  P+V TFNTLI G+CK+ KL  A ++
Sbjct: 393 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 452

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              M    ++P+ +TYN+++NG  + G        ++EM+  G   + +TYN LI   C+
Sbjct: 453 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 512

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             K ++A+ ++  + +  L P+A +++ LI G C   + E A+ L++ +   G       
Sbjct: 513 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 572

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F  L+  F    +   A ++  EML K    DS     L  G       + A     +M 
Sbjct: 573 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 632

Query: 536 IRGLLPKGFDKLRTIN 551
            +G +P      R IN
Sbjct: 633 KKGFIPSMSTFGRVIN 648



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 3/376 (0%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +RG+ ++       +L D  + +Y + D   + ++ L +    +   + A     +M + 
Sbjct: 228 IRGLCEAGRLPEAVRLVDG-MRAYAVPDV--VTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G LP   + N  +        V  A    K+       P+  T   +++  C  G +ERA
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E+F   ++ G  P +  YN+L+ G C +GL+  A++  N M + G  P++ T+N +I G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G + +A  + ++       P+V T+NTLI+GY +    +    L E M   GI  D
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 464

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            +TYN+++ GLCK GK  +     +++      PN  TY+ LI   C     E A ++  
Sbjct: 465 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 524

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G  P+   F  L+  FC+N D + A  +  ++ EK  +  +   + L        
Sbjct: 525 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 584

Query: 523 KDELAMKLFRKMEIRG 538
              +A K+F +M  +G
Sbjct: 585 NMHMAEKIFDEMLSKG 600



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 34/377 (9%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + YA   + R+A D F +M  +   P   + N  + +L+D+   D A   Y  M    +
Sbjct: 57  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116

Query: 260 SPNVYTLNMVMHAFC-------------------------------KLGIIERAVEVFKN 288
           SP+++T  + + +FC                                 G    A ++F  
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 176

Query: 289 MESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           M      P++  +N ++   C +G +L   +    ++++ G+  N+ T+N  I G C+ G
Sbjct: 177 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAG 235

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +L EA R+   M+A  V P+VVTYNTLI G  +    +        M+  G   D  TYN
Sbjct: 236 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 294

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I G CK    ++A  L+KD      VP+  TY +LI G C   + ERA +L+      
Sbjct: 295 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 354

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+  ++  L+   C       A +V+ EM E+   PD    + + +GL   G    A
Sbjct: 355 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 414

Query: 528 MKLFRKMEIRGLLPKGF 544
             +     ++G LP  F
Sbjct: 415 TVVMNDAIMKGYLPDVF 431



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y  R K  +A     +M +YG  P   + N  L+ L  + +V+     ++EM 
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N+++  FC+   +E A +V   M   G  P   ++NTLI G C  G L 
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      +E+ G      TFNTLI  F  K  +H A +IF EM +     +  TY  LI
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +  N +       EM++ G    + T+  +I  L    +  +A  ++  + K  +V
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672

Query: 436 P 436
           P
Sbjct: 673 P 673



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 11/255 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G+  +   +  ++ F  ++   + C  +P+ +++L + +    K   A+    +M 
Sbjct: 470 SVLNGLCKAGKVNEVNETFQEMIL--KGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   S N  +     +  ++ A   ++++     S    T N ++ AF     + 
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F  M S G      TY  LI G C    +  A      M K G  P++ TF  +I
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 647

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
                  ++ +A  I   M    V P VV  +T++N        E+ A   L E++++ G
Sbjct: 648 NSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA----DKKEIAAPKILVEDLMKKG 701

Query: 399 IKVDILTYNALILGL 413
             +   TY  L  G+
Sbjct: 702 -HISYPTYEVLHEGV 715


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 170/320 (53%), Gaps = 1/320 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR Y  +P + + N  +  L        A+ + + M      P+ +T N ++  +CK+ +
Sbjct: 248 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A E+ K+    GF+P   TY +LI+G C +G +  A++  N  +  GI+P+++ +N+
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G C +G +  A ++ +EM      P++ TYN +ING  ++GN      +  + +  G
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D+ T+N LI G CK  K   A  LV+ + +  + P+  TY++++ G C         
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + ++ MI  GC PN   + +L+  FC++   + A++V+++M ++ + PD++  + L  G 
Sbjct: 487 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 546

Query: 519 HHCGKDELAMKLFRKMEIRG 538
              G  E A  LF+K+E +G
Sbjct: 547 CRNGDLEGAYLLFQKLEEKG 566



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 164/336 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F + +  G  P I   N  +  L     +  AL    EM      P++ T N+V++
Sbjct: 345 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G I  A  V  +    G++P V T+NTLI G+C +  L  A++    M + GI P
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 464

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + IT+N+++ G CK GK++E N  F EM      PN +TYN LI  + +    E  + + 
Sbjct: 465 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 524

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M + G+  D +++N LI G C+ G  + A  L + L++      A T++ LI     +
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 584

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N   A +++  M+  G R + + + +L+   C+  + DRA   L+EM++K   P     
Sbjct: 585 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
             + + L    +   A+ +   M   G++P+  D +
Sbjct: 645 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTI 680



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 4/376 (1%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKT----YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +++ Y  RM +   L  D  + T    Y      + AT+        GF+P   +    +
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 333

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     V+ AL  + E +   I P++   N ++   C  G+I  A++V   M   G  
Sbjct: 334 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 393

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + TYN +I+G C  G +S A    N     G  P+V TFNTLI G+CK+ KL  A ++
Sbjct: 394 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 453

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              M    ++P+ +TYN+++NG  + G        ++EM+  G   + +TYN LI   C+
Sbjct: 454 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 513

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             K ++A+ ++  + +  L P+A +++ LI G C   + E A+ L++ +   G       
Sbjct: 514 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 573

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F  L+  F    +   A ++  EML K    DS     L  G       + A     +M 
Sbjct: 574 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 633

Query: 536 IRGLLPKGFDKLRTIN 551
            +G +P      R IN
Sbjct: 634 KKGFIPSMSTFGRVIN 649



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 3/376 (0%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +RG+ ++       +L D  + +Y + D   + ++ L +    +   + A     +M + 
Sbjct: 229 IRGLCEAGRLPEAVRLVDG-MRAYAVPDV--VTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G LP   + N  +        V  A    K+       P+  T   +++  C  G +ERA
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E+F   ++ G  P +  YN+L+ G C +GL+  A++  N M + G  P++ T+N +I G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G + +A  + ++       P+V T+NTLI+GY +    +    L E M   GI  D
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 465

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            +TYN+++ GLCK GK  +     +++      PN  TY+ LI   C     E A ++  
Sbjct: 466 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 525

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G  P+   F  L+  FC+N D + A  +  ++ EK  +  +   + L        
Sbjct: 526 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 585

Query: 523 KDELAMKLFRKMEIRG 538
              +A K+F +M  +G
Sbjct: 586 NMHMAEKIFDEMLSKG 601



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 34/377 (9%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + YA   + R+A D F +M  +   P   + N  + +L+D+   D A   Y  M    +
Sbjct: 58  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117

Query: 260 SPNVYTLNMVMHAFC-------------------------------KLGIIERAVEVFKN 288
           SP+++T  + + +FC                                 G    A ++F  
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 177

Query: 289 MESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           M      P++  +N ++   C +G +L   +    ++++ G+  N+ T+N  I G C+ G
Sbjct: 178 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAG 236

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +L EA R+   M+A  V P+VVTYNTLI G  +    +        M+  G   D  TYN
Sbjct: 237 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 295

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I G CK    ++A  L+KD      VP+  TY +LI G C   + ERA +L+      
Sbjct: 296 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 355

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+  ++  L+   C       A +V+ EM E+   PD    + + +GL   G    A
Sbjct: 356 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 415

Query: 528 MKLFRKMEIRGLLPKGF 544
             +     ++G LP  F
Sbjct: 416 TVVMNDAIMKGYLPDVF 432



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y  R K  +A     +M +YG  P   + N  L+ L  + +V+     ++EM 
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N+++  FC+   +E A +V   M   G  P   ++NTLI G C  G L 
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      +E+ G      TFNTLI  F  K  +H A +IF EM +     +  TY  LI
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +  N +       EM++ G    + T+  +I  L    +  +A  ++  + K  +V
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673

Query: 436 P 436
           P
Sbjct: 674 P 674



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 11/255 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G+  +   +  ++ F  ++   + C  +P+ +++L + +    K   A+    +M 
Sbjct: 471 SVLNGLCKAGKVNEVNETFQEMIL--KGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   S N  +     +  ++ A   ++++     S    T N ++ AF     + 
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F  M S G      TY  LI G C    +  A      M K G  P++ TF  +I
Sbjct: 589 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 648

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
                  ++ +A  I   M    V P VV  +T++N        E+ A   L E++++ G
Sbjct: 649 NSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA----DKKEIAAPKILVEDLMKKG 702

Query: 399 IKVDILTYNALILGL 413
             +   TY  L  G+
Sbjct: 703 -HISYPTYEVLHEGV 716


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 169/327 (51%), Gaps = 3/327 (0%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F +M  +G  P ++ CN  L  L D+ R D     Y +M +  + P+++T N ++ +FC
Sbjct: 181 AFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFC 240

Query: 275 KLGIIERAVEVFKNME--SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           K G +++AV + K+ME  + G +P+  TYN +I+G   KG L  A +  ++M  +  + +
Sbjct: 241 KAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KAS 299

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+N LI G   +  + +A  +  EM+   + P VVTYNTLI+G  + GN+E     ++
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   G+  D++TYN+LI G CK G  K+A  L  DL +  L P   TY+ LI G C   
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           + E A +L + M    C P+   + +LM+  C   +         EML K + PD    +
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGL 539
              S     G    A +L  +M +RG+
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGI 506



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 180/383 (46%), Gaps = 3/383 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      +  ++L D +  S +   +S   ++ L      R     A     +M +
Sbjct: 272 VINGLARKGELEKAAQLVDIMRLSKK---ASAFTYNPLITGLLARDFVEKAGALLLEMEN 328

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + N  +  L  +   + A   + EMR   + P++ T N +++ +CK G +++
Sbjct: 329 EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +F +++  G  P+V TYN LI G+C  G L  A + K  M +    P+V T+  L+ 
Sbjct: 389 ALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMN 448

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C    L      F EM +  + P+   YNT I+    +G       L EEM+  GI  
Sbjct: 449 GSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISS 508

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D +TYN LI GLCK G  K A  L   +  + L  +  TY+ LI   C R     A  ++
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M+ SG  P+   + + + T+C+  +   A     +MLE+ + P+ +  + L   L   
Sbjct: 569 DGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRM 628

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G+ E A + F +M  RGL+P  +
Sbjct: 629 GRTESAYQHFHEMLERGLVPNKY 651



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 171/347 (49%), Gaps = 4/347 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + D LFKT         A   F +MR  G LP + + N  ++    +  +  AL  + ++
Sbjct: 341 LIDGLFKT----GNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDL 396

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +R  + P V T N+++  +C+LG +E A  + + M     +P V TY  L++G C    L
Sbjct: 397 KRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNL 456

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           ++   F + M   G++P+   +NT I      G +  A ++  EM    +S + VTYN L
Sbjct: 457 AMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVL 516

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  + G+ +    L+ +M+ +G+++D +TY  LI   C+ G+  +A  +   +  + L
Sbjct: 517 IDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGL 576

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+  I   C R N   A+  ++ M+  G  PN+  + +LM   C+    + A +
Sbjct: 577 SPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQ 636

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EMLE+ + P+    + L  G    G    A++L+ +M  +G+ P
Sbjct: 637 HFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 138/297 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +++L   Y        A     +M +   LP + +    ++       + +   F+ E
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N  + A   +G I  A ++ + M   G      TYN LI G C  G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A      M  +G++ + +T+  LI   C++G+L EA  IF  M A+ +SP+VVTY  
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+ Y + GN  +    + +ML  G++ + +TYN L+  LC+ G+T+ A     ++ +  
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           LVPN  TY+ LI G C   N   A +LY  M + G  P+      L   F +   +D
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYD 702



 Score = 61.6 bits (148), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 38/190 (20%)

Query: 389 SLYEEMLRN-----------------------------------GIKVDILTYNALILGL 413
           S ++EM R+                                   G++  I TYN L+   
Sbjct: 180 SAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSF 239

Query: 414 CKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           CK G+  +A  L+KD++  +   +PN  TY+ +I G   +   E+A QL   M R   + 
Sbjct: 240 CKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKA 298

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  L++     +  ++A  +LLEM  + + P  +  + L  GL   G  E A   F
Sbjct: 299 SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKF 358

Query: 532 RKMEIRGLLP 541
            +M  +GLLP
Sbjct: 359 DEMRAKGLLP 368


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/462 (27%), Positives = 201/462 (43%), Gaps = 63/462 (13%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ T++ +L+ L K  + + +  +LR I+D+                   C    + +  
Sbjct: 20  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNG------------------CTPDVVTYTS 61

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L       K+   A   F +M   G           +  LL + ++  A   YK M  + 
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+V TL+ ++    K G I  AV +FK+ME+ G  P+   Y+ LI G C    +  A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M+K    P+ IT+N LI G CK G +  A   F EM      P+V TYN LI+G+
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 379 GQVGNSEMGA-SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
            + GN++  + SL +E   NG  +DI TY A++  L K  K ++A  L++ +  N   P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN--------------KHIFE------ 477
            +TY+AL+ G C     E A  L + ++ +GC P+              K  FE      
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 361

Query: 478 ------MLMSTFC---------QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
                 + + T C         Q     +A+ V   M      PD + LS +  GL   G
Sbjct: 362 EMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 421

Query: 523 KDELAMKLFRKMEIRGLLPK---------GFDKLRTINCAPE 555
           +   A+++F+ ME RGL P          G  K R ++CA E
Sbjct: 422 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 463



 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 169/352 (48%), Gaps = 1/352 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   ++ L        +   A D   ++ D G  P + +    +  L   +R   A 
Sbjct: 17  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 76

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +KEM    ++ +      ++    + G I +A  V+K M S G +P V T +T+I G 
Sbjct: 77  KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGL 136

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +  A++    ME  G+ PN + ++ LI G CK  K+  A  + ++MK    +P+ 
Sbjct: 137 SKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 196

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY-LVK 427
           +TYN LI+G  + G+ E   + ++EML  G K D+ TYN LI G CK G T  A++ L +
Sbjct: 197 ITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQ 256

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +   N    +  TY+A++      K  E A  L + +  +GC P    +  L++  C+  
Sbjct: 257 ETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMG 316

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + A ++L ++++    PD +  + L  GL    +   A KLF++M +RGL
Sbjct: 317 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGL 368



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 187/432 (43%), Gaps = 45/432 (10%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ +H  V  ++T +       +++ G+  +       ++F S+    R    + +V+  
Sbjct: 116 TMTSHGCVPDVVTLS-------TMIDGLSKAGRIGAAVRIFKSM--EARGLAPNEVVYSA 166

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L       +K   A +   QM+     P   + N  +  L  S  V+ A  F+ EM    
Sbjct: 167 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226

Query: 259 ISPNVYTLNMVMHAFCKLG------------------------------------IIERA 282
             P+VYT N+++  FCK G                                     IE A
Sbjct: 227 CKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEA 286

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V + + + + G  P++ TYN L++G C  G L  A+     +  NG  P+V+T+ +LI G
Sbjct: 287 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 346

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             K+ +  EA ++F EM    ++ + V Y  LI    Q G     +S+Y+ M  +G   D
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T + +I GL K G+   A  + K ++   L PN   YSALI G C  +  + A ++  
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M ++ C P+   + +L+   C++ D + A     EMLE    PD    + L SG    G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526

Query: 523 KDELAMKLFRKM 534
             + A  +F  M
Sbjct: 527 NTDAACGVFDDM 538



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 183/417 (43%), Gaps = 38/417 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++R +L +      S ++ ++  +   C    +    +    +   +   A   F  M 
Sbjct: 96  ALIRELLQTGKIPQASSVYKTM--TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P     +  +  L  + ++D AL    +M++   +P+  T N+++   CK G +E
Sbjct: 154 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVE 213

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL-----SLAMK---------------- 319
            A   F  M   G  P V TYN LISG C  G       SLA +                
Sbjct: 214 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273

Query: 320 ----FKN--------LMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
                KN        LMEK   NG  P + T+N L+ G CK G+L EA  +  ++     
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+VVTY +LI+G G+   S     L++EM   G+ +D + Y ALI  L + GK  +A+ 
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K +  +  VP+  T S +I G         A +++KSM   G  PN+ ++  L+   C
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +    D A E+L +M +    PD+I  + L  GL   G  E A   F +M   G  P
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 510



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 153/332 (46%), Gaps = 18/332 (5%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           ++ + T++ ++  L KN+K + + +++  I                  +   C  +   +
Sbjct: 264 TIDIHTYTAIVDWLAKNKKIEEAVALMEKI------------------TANGCTPTIATY 305

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L        +   A D   ++ D G  P + +    +  L   +R   A   +KEM  
Sbjct: 306 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 365

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             ++ +      ++    + G I +A  V+K M S G +P V T +T+I G    G +  
Sbjct: 366 RGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGA 425

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A++    ME  G+ PN + ++ LI G CK  K+  A  + ++MK    +P+ +TYN LI+
Sbjct: 426 AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILID 485

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G+ E   + ++EML  G K D+ TYN LI G CK G T  A  +  D+  +    
Sbjct: 486 GLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSA 545

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           N  TY ALI+G C R+   +A   ++ M   G
Sbjct: 546 NVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 125/249 (50%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           IE AV + + + + G  P++ TYN L++G C  G L  A+     +  NG  P+V+T+ +
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G  K+ +  EA ++F EM    ++ + V Y  LI    Q G     +S+Y+ M  +G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++T + +I GL K G+   A  + K ++   L PN   YSALI G C  +  + A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++   M ++ C P+   + +L+   C++ D + A     EMLE    PD    + L SG 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 519 HHCGKDELA 527
              G  + A
Sbjct: 242 CKAGNTDAA 250



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/377 (23%), Positives = 160/377 (42%), Gaps = 38/377 (10%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+  S   +     FD +L +   C      +++L   +        A+ +  Q   
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEA--GCKPDVYTYNILISGFCKAGNTDAASHSLAQETT 259

Query: 222 YGFLPI-IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                I I +    +  L  +++++ A+   +++  N  +P + T N +++  CK+G +E
Sbjct: 260 INGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 319

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISG--------------------------HC----- 309
            A+++ + +   G  P V TY +LI G                           C     
Sbjct: 320 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALI 379

Query: 310 ----NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                 G +  A      M  +G  P+V+T +T+I G  K G++  A RIF  M+A  ++
Sbjct: 380 RELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLA 439

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN V Y+ LI+G  +    +    +  +M +     D +TYN LI GLCK G  + A   
Sbjct: 440 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 499

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++ +    P+  TY+ LI+G C   N++ A  ++  M  S C  N   +  L+S  C+
Sbjct: 500 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCK 559

Query: 486 NEDFDRAAEVLLEMLEK 502
                +A+     M E+
Sbjct: 560 RRQLTKASLYFQHMKER 576



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 323 LMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           LMEK   NG  P + T+N L+ G CK G+L EA  +  ++     +P+VVTY +LI+G G
Sbjct: 8   LMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 67

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +   S     L++EM   G+ +D + Y ALI  L + GK  +A+ + K +  +  VP+  
Sbjct: 68  KEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVV 127

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           T S +I G         A +++KSM   G  PN+ ++  L+   C+    D A E+L +M
Sbjct: 128 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 187

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +    PD+I  + L  GL   G  E A   F +M   G  P
Sbjct: 188 KKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP 229



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 88/180 (48%), Gaps = 9/180 (5%)

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E   +L E++  NG    I TYNAL+ GLCK G+ ++A  L++ +  N   P+  TY++L
Sbjct: 3   EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 62

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G    K S  A++L+K M   G   +   +  L+    Q     +A+ V   M     
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGC 122

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK---------GFDKLRTINCAPE 555
            PD + LS +  GL   G+   A+++F+ ME RGL P          G  K R ++CA E
Sbjct: 123 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 182


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 192/422 (45%), Gaps = 34/422 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G+  +  F+    L    + + R C  S   ++ L      ++    A     +  
Sbjct: 50  SIMDGLCKAGKFERAHSLL--AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFV 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF+P + + +     L    R+D A    KEM  N  +PN+ T N ++   CK    E
Sbjct: 108 SSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTE 167

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A E+ + + S GF+P V TY  ++ G C +G L  A+K    M K G  P+VIT+  L+
Sbjct: 168 KAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALM 227

Query: 341 FGFCKKGKLHEANRIFSEMKATNV--------------------------------SPNV 368
            G C+ G++ EA+ IF EM + +                                 +P +
Sbjct: 228 EGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYI 287

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             YN L++GY + G  +   +++E+M   G   +I TYN ++ GLCK GK  +A   ++ 
Sbjct: 288 DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLES 347

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +     VP+  +Y+ +I G       + A Q+   MI++G  P+   +  LM+ FC+ E 
Sbjct: 348 MHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
           FD A  +L  M++  + PD++  + L SGL    +   A +L  +M   G +        
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467

Query: 549 TI 550
           TI
Sbjct: 468 TI 469



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 157/323 (48%), Gaps = 3/323 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M +    P + + N  +  L  + + D A     EM    ++P+  T N +M   CK G 
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            ERA  +   M      PS  TYNTLISG C +  +  A    +    +G  P+V+T++ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L  G CK+G++ EA  +  EM     +PN+VTYNTLI+G  +   +E    L E ++ +G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++TY  ++ GLCKEG+  KA  +V+ + K    P+  TY+AL+ G C     + A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            ++K M+   C  +   +  L++ +C++     A +V+  +      P   + + L  G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGY 297

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ +    +F  M  RG +P
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVP 320



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 5/352 (1%)

Query: 192 SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +P VF  ++L        K   A++   +M D G  P   + N  +  L  + + + A  
Sbjct: 7   APDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHS 66

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M      P+  T N ++   CK   ++RA  +     S GF+P V TY+ L  G C
Sbjct: 67  LLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLC 126

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +  A +    M  NG  PN++T+NTLI G CK  K  +A  +   + ++   P+VV
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY  +++G  + G  +    + E ML+ G    ++TY AL+ GLC+ G+  +A ++ K++
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                  +A  Y +L+ G C    ++ A ++    IR    P   ++  LM  +C+    
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG-IRG--TPYIDVYNALMDGYCKEGRL 303

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D    V  +M  +   P+    + +  GL   GK + A      M   G +P
Sbjct: 304 DEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 355



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 185/418 (44%), Gaps = 45/418 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D    +F  ++   + C +  L +  L   Y    + + A      +R
Sbjct: 225 ALMEGLCRTGRVDEAHHIFKEMVS--KDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 282

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P I+  N  +       R+D     +++M      PN+ T N+VM   CK G ++
Sbjct: 283 G---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A    ++M S G +P V +YN +I G         A +  + M + GI P+ +T+NTL+
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-- 398
             FCK+ +  +A  I   M    V P+ VTYNTLI+G  Q         L  EMLRNG  
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459

Query: 399 ----------------------------------IKVDILTYNALILGLCKEGKTKKAAY 424
                                             ++ + +TYN  I  LCKEG+  +A+ 
Sbjct: 460 VSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASS 519

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR-SGCRPNKHIFEMLMSTF 483
           L+ ++D    + +  +Y+ +I G C  +  +RA +L + M+   G     H F +L+  F
Sbjct: 520 LLSEMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAF 576

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +  D A  +L  M+++  +P  I  + + + L    K + A +LF +M +RG++ 
Sbjct: 577 TKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 634



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 159/343 (46%), Gaps = 9/343 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++ D LFK  +  K+ R   D   QM   G  P   + N  ++     ER D A+G  K 
Sbjct: 362 IIIDGLFKA-SKPKEARQVLD---QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV-TTYNTLISGHCNKG 312
           M +  + P+  T N ++    +   +  A E+   M   G + S  TTYNT+I   C +G
Sbjct: 418 MIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 477

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A+   + M  +G++ N +T+N  I   CK+G+L EA+ + SEM       + V+Y 
Sbjct: 478 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYT 534

Query: 373 TLINGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           T+I G  +    +  + L  EM+   G+ +   T+N LI    K  +  +A  L++ + +
Sbjct: 535 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQ 594

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               P+  TY+ +IT  C     ++A++L+  M   G   +   + +L+   C       
Sbjct: 595 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 654

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           A +VL EM       D +   +LY  L   G+ E A +L R+M
Sbjct: 655 ALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 217/473 (45%), Gaps = 10/473 (2%)

Query: 76  GQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-----HVLLKVQKDYVLSLEFFTWV 130
           G+D  FV+ +   ++        ALS+ L   R+K      +L+    D  L L FF ++
Sbjct: 36  GEDKQFVD-SVRRIVRGKRSWEIALSSELVSRRLKTIHVEEILIGTIDDPKLGLRFFNFL 94

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
             H+    +  +  I++H L +   F  + S+L+          PS++FD++   Y  C 
Sbjct: 95  GLHRGFDHSTASFCILIHALVQANLFWPASSLLQ--TLLLRALKPSEVFDALFSCYEKCK 152

Query: 191 -SSPLVFDLLFKTYAHRKKFRNATDTF-CQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            SS   FDLL + Y   ++  +    F   M     LP + + +  L  L+      +A+
Sbjct: 153 LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAM 212

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M    I P+VY    V+ + C+L  + RA E+   ME+ G   ++  YN LI G 
Sbjct: 213 ELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGL 272

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C K  +  A+  K  +    ++P+V+T+ TL+ G CK  +      +  EM     SP+ 
Sbjct: 273 CKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSE 332

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
              ++L+ G  + G  E   +L + +   G+  +I  YNALI  LCK     +A  L   
Sbjct: 333 AAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDR 392

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  L PN  TYS LI   C R   + A      MI  G +P+ + +  L++  C+  D
Sbjct: 393 MGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGD 452

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A  ++ EM+ K + P  +  + L  G    GK   A++L+ +M  +G++P
Sbjct: 453 ISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVP 505



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 197/407 (48%), Gaps = 7/407 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+     F++  ++ D +L   R   S   V  L+ +    R K   A +   ++ 
Sbjct: 302 TLVCGLCKVQEFEVGLEMIDEML-RLRFSPSEAAVSSLV-EGLRKRGKVEEALNLVKRVA 359

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++G  P I   N  + SL      D A   +  M +  + PN  T ++++  FC+ G ++
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLD 419

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+     M  MG  PSV  YN+LI+GHC  G +S A      M    ++P V+T+ +L+
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLM 479

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C KGK+++A R++ EM    + P++ T+ TL++G  + G       L+ EM    +K
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN +I G C+EG   KA   + ++ +  +VP+  +Y  LI G C+   +  A   
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG-LH 519
              + +  C  N+  +  L+  FC+    + A  V  +M  + +  D +    L  G L 
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLK 659

Query: 520 HCGKD-ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE-KESGGL 564
           H  KD ++ + L ++M  RGL P        I+   + G+ KE+ G+
Sbjct: 660 H--KDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 166/358 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V++ L  +    + F  A   F +M   G  P   + +  +       ++D AL F  E
Sbjct: 368 FVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+VY  N +++  CK G I  A  +   M +    P+V TY +L+ G+C+KG 
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A++  + M   GI P++ TF TL+ G  + G + +A ++F+EM   NV PN VTYN 
Sbjct: 488 INKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNV 547

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY + GN         EM+  GI  D  +Y  LI GLC  G+  +A   V  L K +
Sbjct: 548 MIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              N   Y+ L+ G C     E A  + + M   G   +   + +L+    +++D     
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFL 667

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +L EM ++ + PD +I + +       G  + A  ++  M   G +P        IN
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 175/390 (44%), Gaps = 2/390 (0%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           + ++  ++L G++    F L  +LFD ++      D    ++  + ++    K    A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDV--YIYTGVIRSLCELKDLSRAKE 248

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              QM   G    I   N  +  L   ++V  A+G  K++    + P+V T   ++   C
Sbjct: 249 MIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLC 308

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K+   E  +E+   M  + F PS    ++L+ G   +G +  A+     + + G+ PN+ 
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI   CK     EA  +F  M    + PN VTY+ LI+ + + G  +   S   EM
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  G+K  +  YN+LI G CK G    A  L+ ++    L P   TY++L+ G C +   
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +A +LY  M   G  P+ + F  L+S   +      A ++  EM E  + P+ +  + +
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             G    G    A +   +M  +G++P  +
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTY 578



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           +FD    LFD  +    +C  + + + +L   +  R K   A     +M D G  P +  
Sbjct: 382 NFDEAELLFDR-MGKIGLC-PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYP 439

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  ++       +  A     EM   ++ P V T   +M  +C  G I +A+ ++  M 
Sbjct: 440 YNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMT 499

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G +PS+ T+ TL+SG    GL+  A+K    M +  ++PN +T+N +I G+C++G + 
Sbjct: 500 GKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMS 559

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A    +EM    + P+  +Y  LI+G    G +       + + +   +++ + Y  L+
Sbjct: 560 KAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G C+EGK ++A  + +D+    +  +   Y  LI G    K+ +    L K M   G +
Sbjct: 620 HGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLK 679

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           P+  I+  ++    +  DF  A  +   M+ +   P+ +  + + +GL   G
Sbjct: 680 PDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 37/379 (9%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  + K   A   + +M   G +P I +    LS L  +  +  A+  + EM    
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN 537

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN  T N+++  +C+ G + +A E    M   G +P   +Y  LI G C  G  S A 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            F + + K   + N I +  L+ GFC++GKL EA  +  +M    V  ++V Y  LI+G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGS 657

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  + ++   L +EM   G+K D + Y ++I    K G  K+A  +   +     VPN 
Sbjct: 658 LKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 439 STYSALITGQCVR------------------------------------KNSERAFQLYK 462
            TY+A+I G C                                       + ++A +L+ 
Sbjct: 718 VTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHN 777

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           ++++ G   N   + ML+  FC+    + A+E++  M+   ++PD I  + + S L    
Sbjct: 778 AILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRN 836

Query: 523 KDELAMKLFRKMEIRGLLP 541
             + A++L+  M  +G+ P
Sbjct: 837 DVKKAIELWNSMTEKGIRP 855



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/351 (23%), Positives = 153/351 (43%), Gaps = 37/351 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++ + Y        A +   +M + G +P   S    +  L  + +   A  F   
Sbjct: 543 VTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEV---------------------------- 285
           + +     N      ++H FC+ G +E A+ V                            
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 286 -------FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                   K M   G  P    Y ++I      G    A    +LM   G  PN +T+  
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ-VGNSEMGASLYEEMLRN 397
           +I G CK G ++EA  + S+M+  N  PN VTY   ++   + VG+ +    L+  +L+ 
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK- 781

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  +  TYN LI G C++G+ ++A+ L+  +  + + P+  TY+ +I+  C R + ++A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            +L+ SM   G RP++  +  L+   C   +  +A E+  EML + + P++
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNT 892



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 97/202 (48%), Gaps = 4/202 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G +  M      PN  T   V++  CK G +  A  +   M     +P+  TY   + 
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLD 760

Query: 307 GHCNKGL--LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
               KG+  +  A++  N + K G+  N  T+N LI GFC++G++ EA+ + + M    V
Sbjct: 761 -ILTKGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGV 818

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           SP+ +TY T+I+   +  + +    L+  M   GI+ D + YN LI G C  G+  KA  
Sbjct: 819 SPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878

Query: 425 LVKDLDKNSLVPNASTYSALIT 446
           L  ++ +  L PN  T    I+
Sbjct: 879 LRNEMLRQGLKPNTETSETTIS 900



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G L    + N  +       R++ A      M  + +SP+  T   ++   C+   +++A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +E++ +M   G  P    YNTLI G C  G +  A + +N M + G++PN  T  T I
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 212/430 (49%), Gaps = 8/430 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRG--ILDSDSFDLPSKLFD 180
           SLEFF            + ++  ++HIL++ R +K     L    +L  +++ + S ++D
Sbjct: 115 SLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNY-IASAVWD 173

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            ++  YR    SP VFD++ K +A +   + A   F  M   G +P + SCN  LS+L+ 
Sbjct: 174 ELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQ 233

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           +     AL  Y++M    I P++++  ++++A+CK G ++ A    K ME     P+V T
Sbjct: 234 NGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVT 293

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN+LI G+ + G +  A K   LM + GI  N  T+  LI G+CK+G++ +A ++   M 
Sbjct: 294 YNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMM 353

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
             N+  +   Y  LI+ Y   G  +    + + ML+ G+K++ +  N+LI G CK G   
Sbjct: 354 EKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVN 413

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           KAA ++  +   +L P++  Y+ L+ G C +++  +AF+L   M   G       +  L+
Sbjct: 414 KAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLL 473

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
                    + A  +   M ++ +AP+ +    L       G  + AM +++       L
Sbjct: 474 KNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDA-----L 528

Query: 541 PKGFDKLRTI 550
            KGF K  T+
Sbjct: 529 SKGFTKSITL 538



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 153/346 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + LL K Y  R +   A      M +             + +   + RVD AL     M 
Sbjct: 329 YTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAML 388

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +  N    N +++ +CKLG + +A EV  +M+     P    YNTL+ G C +    
Sbjct: 389 KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFI 448

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M   G+   V+T+NTL+      G +  A  I++ M    V+PN VTY TL+
Sbjct: 449 KAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLL 508

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + +VG  +    ++++ L  G    I  YN +I G CK  K  +A  +   + +    
Sbjct: 509 DAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFP 568

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY  LI G C   N   A +L     R G   +  ++  L++   ++E+  +   +
Sbjct: 569 PDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGL 628

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L EM  + ++P+ +    L +G    G  + A   + KM  +G+ P
Sbjct: 629 LAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAP 674



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 2/304 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y        A +    M+D+   P     N  L      E    A     EM    
Sbjct: 402 LINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKG 461

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++  V T N ++     +G +E A+ ++  M   G  P+  TY TL+      G    AM
Sbjct: 462 VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAM 521

Query: 319 K-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
             +K+ + K G   ++  +NT+I GFCK  KL +A  IF +MK     P+ +TY TLI+G
Sbjct: 522 MIWKDALSK-GFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y +VGN      L +   R+GI      YN+LI G+ +  + +K   L+ ++    L PN
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY +LI G C +   ++A+  Y  MI  G  PN  I   ++S+  ++   D A  +L 
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILH 700

Query: 498 EMLE 501
           ++ +
Sbjct: 701 QIAD 704



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 182/468 (38%), Gaps = 113/468 (24%)

Query: 180 DSILYSYRMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           +  + ++++CD         + + ++ L K   H     +A   +  M   G  P   + 
Sbjct: 445 EDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTY 504

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
              L +       D A+  +K+      + ++   N ++  FCK+  + +A E+F  M+ 
Sbjct: 505 CTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKE 564

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------------- 330
           +GF P   TY TLI G+C  G L  A+K K++ E++GI                      
Sbjct: 565 LGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQK 624

Query: 331 --------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                         PNV+T+ +LI G+C KG + +A   + +M    ++PN++  + +++
Sbjct: 625 LNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVS 684

Query: 377 G---YGQVGNSEM-----------------------------GASLYEEMLRNGIKVDI- 403
               +G++  + +                                + +   +  + + I 
Sbjct: 685 SLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPIS 744

Query: 404 --LTYNALILGLCKE-----------------------------------GKTKKAAYLV 426
             + YN  I GLCK                                    GK  +A  L 
Sbjct: 745 NNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLR 804

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            D+    LVPN   Y+ALI G C   N +RA +L+  + R G  P    +  L+  +C+ 
Sbjct: 805 DDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKG 864

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
                A E+  +M E+ + P SI  S L  GL+  GK E ++ L  +M
Sbjct: 865 GRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 89/167 (53%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  S+ +D       ++      P+ YT   ++HA   +G +  A  +  +M +
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P++  YN LI+G C  G L  A +  N + + G+ P V+T+NTLI G+CK G+  E
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTE 869

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           A  +  +M+   + P+ +TY+TLI+G    G SE    L  EM++ G
Sbjct: 870 ALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 101/196 (51%), Gaps = 1/196 (0%)

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S L   E   I   F K+     IS N+   N+ +   CK   I+    +  ++   GF 
Sbjct: 720 SDLRHLETQKIVDSFGKKAMSIPISNNI-VYNIAITGLCKSKNIDDVRRILSDLLLKGFC 778

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   TY +LI      G ++ A   ++ M   G+ PN++ +N LI G CK G L  A R+
Sbjct: 779 PDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRL 838

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F+++    +SP VVTYNTLI+GY + G +     L ++M   GI    +TY+ LI GL  
Sbjct: 839 FNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYM 898

Query: 416 EGKTKKAAYLVKDLDK 431
           EGK++++  L+ ++ K
Sbjct: 899 EGKSEQSVGLLNEMMK 914



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 138/342 (40%), Gaps = 50/342 (14%)

Query: 209 FRNATDTFCQM--------------RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +R   D +C++              RD G     E  N  ++ +  SE +    G   EM
Sbjct: 574 YRTLIDGYCKVGNLVEALKLKDMSERD-GISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +   +SPNV T   ++  +C  G++++A   +  M   G  P++   + ++S     G +
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692

Query: 315 SLA-----------------------------MKFKNLMEKNGIQP------NVITFNTL 339
             A                             ++ + +++  G +       N I +N  
Sbjct: 693 DEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIA 752

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK   + +  RI S++      P+  TY +LI+    VG       L ++M+  G+
Sbjct: 753 ITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGL 812

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             +I+ YNALI GLCK G   +A  L   L +  L P   TY+ LI G C    +  A +
Sbjct: 813 VPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALE 872

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           L   M   G  P+   +  L+         +++  +L EM++
Sbjct: 873 LKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMK 914



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 135/278 (48%), Gaps = 16/278 (5%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA-LGFYKEMRRN 257
           L   +  +     A + + +M D G  P I   +K +SSL    ++D A L  ++    +
Sbjct: 647 LIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADID 706

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------IPSVTTYNTLISGHC-N 310
            I+ + +++ +            R +E  K ++S G       I +   YN  I+G C +
Sbjct: 707 PIAAHAHSVELPKSDL-------RHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKS 759

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K +  +     +L+ K G  P+  T+ +LI      GK++EA  +  +M    + PN+V 
Sbjct: 760 KNIDDVRRILSDLLLK-GFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVV 818

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LING  + GN +    L+ ++ R G+   ++TYN LI G CK G+T +A  L   + 
Sbjct: 819 YNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMR 878

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +  + P++ TYS LI G  +   SE++  L   M+++G
Sbjct: 879 EEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 18/399 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           SL L T + +LH+L K    K  E +L  ++      LP+      L++Y          
Sbjct: 213 SLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGV--LPN------LFTY---------- 254

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +   +    + +   A     ++ D G  P + + N  +  L  + +   A  +  ++  
Sbjct: 255 NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVN 314

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             + P+ +T N ++  +CK G+++ A  +  N    GF+P   TY +LI G C++G  + 
Sbjct: 315 EGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNR 374

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+   N     GI+PNVI +NTLI G   +G + EA ++ SEM    + P V T+N L+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVN 434

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  ++G       L + M+  G   DI T+N LI G   + K + A  ++  +  N + P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDP 494

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++L+ G C     E   + YK+M+  GC PN   F +L+ + C+    D+A  +L
Sbjct: 495 DVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLL 554

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            EM  K + PD++    L  G    G  + A  LFRKME
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/439 (27%), Positives = 205/439 (46%), Gaps = 19/439 (4%)

Query: 106 PFRVKHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           P   KHV  +++ QKD + +LE F  ++       TL T+  ++  L    KF++ E +L
Sbjct: 4   PLLPKHVTTVIRCQKDPMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVL 63

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
                    D+   + + +L           V+    K Y  + K + A + F +M  Y 
Sbjct: 64  --------VDMRQNVGNHMLEG---------VYVGAMKNYGRKGKVQEAVNVFERMDFYD 106

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P + S N  +S L+DS   D A   Y  MR   I+P+VY+  + M +FC+      A+
Sbjct: 107 CEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAAL 166

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +  NM S G   +V  Y T++ G   +       +    M  +G+   + TFN L+   
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVL 226

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CKKG + E  ++  ++    V PN+ TYN  I G  Q G  +    +   ++  G K D+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDV 286

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYN LI GLCK  K ++A   +  L    L P++ TY+ LI G C     + A ++  +
Sbjct: 287 VTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVN 346

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
            + +G  P++  +  L+   C   + +RA  +  E L K + P+ I+ + L  GL + G 
Sbjct: 347 AVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGL 406

Query: 524 DELAMKLFRKMEIRGLLPK 542
              A +L  +M  +GL+P+
Sbjct: 407 ILEAAQLASEMSEKGLIPE 425



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 157/341 (46%), Gaps = 1/341 (0%)

Query: 205 HRKKFRN-ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           + + F++   + F +M   G    + + NK L  L     V        ++ +  + PN+
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           +T N  +   C+ G ++ AV +   +   G  P V TYN LI G C       A  +   
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           +   G++P+  T+NTLI G+CK G +  A RI          P+  TY +LI+G    G 
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           +    +L+ E L  GIK +++ YN LI GL  +G   +AA L  ++ +  L+P   T++ 
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           L+ G C       A  L K MI  G  P+   F +L+  +      + A E+L  M++  
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + PD    + L +GL    K E  M+ ++ M  +G  P  F
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLF 532



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 140/289 (48%)

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           M  + + G ++ AV VF+ M+     P+V +YN ++S   + G    A K    M   GI
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGI 142

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+V +F   +  FC+  + H A R+ + M +     NVV Y T++ G+ +    + G  
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ +ML +G+ + + T+N L+  LCK+G  K+   L+  + K  ++PN  TY+  I G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +   + A ++   +I  G +P+   +  L+   C+N  F  A   L +++ + + PDS 
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             + L +G    G  +LA ++       G +P  F     I+     GE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P I + N  +       +++ AL     M  N + P+VYT N +++  CK    E  
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDV 515

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E +K M   G  P++ T+N L+   C    L  A+     M+   + P+ +TF TLI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDG 575

Query: 343 FCKKGKLHEANRIFSEMKATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           FCK G L  A  +F +M+    VS +  TYN +I+ + +  N  M   L++EM+   +  
Sbjct: 576 FCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY  ++ G CK G        + ++ +N  +P+ +T   +I   CV      A  + 
Sbjct: 636 DGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695

Query: 462 KSMIRSGCRP 471
             M++ G  P
Sbjct: 696 HRMVQKGLVP 705



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 1/244 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   Y+ + K  NA +    M D G  P + + N  L+ L  + + +  +  YK M 
Sbjct: 464 FNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +PN++T N+++ + C+   +++A+ + + M++    P   T+ TLI G C  G L 
Sbjct: 524 EKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583

Query: 316 LAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A   F+ + E   +  +  T+N +I  F +K  +  A ++F EM    + P+  TY  +
Sbjct: 584 GAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLM 643

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++G+ + GN ++G     EM+ NG    + T   +I  LC E +  +AA ++  + +  L
Sbjct: 644 VDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGL 703

Query: 435 VPNA 438
           VP A
Sbjct: 704 VPEA 707



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 110/271 (40%), Gaps = 56/271 (20%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T +I++H  +   K +++  IL  ++D+          D  +Y+Y          + L  
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMMDNG--------VDPDVYTY----------NSLLN 504

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K+ +  +T+  M + G  P + + N  L SL    ++D ALG  +EM+   ++P
Sbjct: 505 GLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNP 564

Query: 262 NV-------------------YTL-----------------NMVMHAFCKLGIIERAVEV 285
           +                    YTL                 N+++HAF +   +  A ++
Sbjct: 565 DAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKL 624

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F+ M      P   TY  ++ G C  G + L  KF   M +NG  P++ T   +I   C 
Sbjct: 625 FQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCV 684

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           + +++EA  I   M    + P  V  NT+ +
Sbjct: 685 EDRVYEAAGIIHRMVQKGLVPEAV--NTIFD 713


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 173/364 (47%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+  +A     QM + G+ P   + N  +  L    +   A+    +M +  
Sbjct: 156 LLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG 215

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++ T   V++  CK G I+ A+ + K ME       V  YNT+I G C    +  A 
Sbjct: 216 CQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAF 275

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              N ME  GI+P+V T+N+LI   C  G+  +A+R+ S M    ++PNVVT++ LI+ +
Sbjct: 276 ALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAF 335

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       LY+EM++  I  DI TY++LI G C   +  +A ++ + +      PN 
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M + G   N   +  L+    Q  D D A ++  +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + PD I  S L  GL   GK E A+ +F  ++   + P  +     I    + G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 559 KESG 562
            E G
Sbjct: 516 VEDG 519



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 175/351 (49%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++++ +       K   +A   F +M   G  P + + N  +S L +  R   A  
Sbjct: 252 EADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASR 311

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M   +I+PNV T + ++ AF K G +  A +++  M      P + TY++LI+G C
Sbjct: 312 LLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A     LM      PNV+T+NTLI GFCK  ++ E   +F EM    +  N V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI G  Q G+ +M   ++++M+ +G+  DI+TY+ L+ GLCK GK +KA  + + L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ + P+  TY+ +I G C     E  + L+ S+   G +PN  I+  ++S FC+    
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + A  +  EM E    PDS   + L       G    + +L ++M   G +
Sbjct: 552 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFV 602



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 188/381 (49%), Gaps = 16/381 (4%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +S R+ D+  LV  ++          F T  H      K   A     QM  
Sbjct: 154 SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ 213

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L     +D+AL   K+M + +I  +V   N ++   CK   I+ 
Sbjct: 214 RGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDD 273

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F  ME+ G  P V TYN+LIS  CN G  S A +  + M +  I PNV+TF+ LI 
Sbjct: 274 AFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALID 333

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GKL EA +++ EM   ++ P++ TY++LING+      +    ++E M+      
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TYN LI G CK  + ++   L +++ +  LV N  TY+ LI G     + + A +++
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHH 520
           K M+  G  P+   + +L+   C+    ++A  V+ E L+K  M PD    + +  G+  
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            GK E    LF  + ++G+ P
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKP 533



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+    S+R+  A+    +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+  T N ++H          AV +   M   G  P + TY  +++G C +G + 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+     MEK  I+ +V+ +NT+I G CK   + +A  +F++M+   + P+V TYN+LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L   M+   I  +++T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+LI G C+    + A  +++ MI   C PN   +  L+  FC+ +  +   E+
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM ++ +  +++  + L  GL   G  ++A K+F+KM   G+ P
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 190/404 (47%), Gaps = 44/404 (10%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F L    F +  Y YR   S   + +L         K  +A   F +M     LP I   
Sbjct: 33  FSLRGVYFSAASYDYREKLSRNALLNL---------KLDDAIGLFGEMVQSRPLPSIVEF 83

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK LS++   ++ D+ +   + M+  RIS ++Y+ N++++ FC+   +  A+ V   M  
Sbjct: 84  NKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF-------- 343
           +G+ P + T ++L++G+C+   +S A+   + M + G +P+ +TFNTLI G         
Sbjct: 144 LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASE 203

Query: 344 ---------------------------CKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                                      CK+G +  A  +  +M+   +  +VV YNT+I+
Sbjct: 204 AVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIID 263

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  +  + +   +L+ +M   GI+ D+ TYN+LI  LC  G+   A+ L+ ++ +  + P
Sbjct: 264 GLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINP 323

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  T+SALI           A +LY  MI+    P+   +  L++ FC ++  D A  + 
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             M+ K   P+ +  + L  G     + E  M+LFR+M  RGL+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 160/309 (51%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+G + EM ++R  P++   N ++ A  K+   +  + + + M+++     + +YN
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +P+++T ++L+ G+C   ++ +A  +  +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P+ VT+NTLI+G      +    +L ++M++ G + D++TY A++ GLCK G    A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K ++K  +  +   Y+ +I G C  K+ + AF L+  M   G RP+   +  L+S 
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C    +  A+ +L  M+E+ + P+ +  S L       GK   A KL+ +M  R + P 
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 543 GFDKLRTIN 551
            F     IN
Sbjct: 360 IFTYSSLIN 368



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 157/312 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P+++T +
Sbjct: 305 RWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A  +F+ M S    P+V TYNTLI G C    +   M+    M + 
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 424

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+NTLI G  + G    A +IF +M +  V P+++TY+ L++G  + G  E  
Sbjct: 425 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 484

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + ++ ++ DI TYN +I G+CK GK +    L   L    + PN   Y+ +I+G
Sbjct: 485 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 544

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C +   E A  L++ M   G  P+   +  L+    ++ D   +AE++ EM       D
Sbjct: 545 FCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604

Query: 508 SIILSELYSGLH 519
           +  +S + + LH
Sbjct: 605 ASTISMVINMLH 616



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 130/269 (48%), Gaps = 2/269 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D     +  L   +    +   A   F  M      P + + N  + 
Sbjct: 346 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RV+  +  ++EM +  +  N  T N ++    + G  + A ++FK M S G  P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G C  G L  A+     ++K+ ++P++ T+N +I G CK GK+ +   +F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNV+ Y T+I+G+ + G  E   +L+ EM  +G   D   YN LI    ++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRD 583

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           G    +A L+K++     V +AST S +I
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 108/227 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ FN L+    K  K      +   M+   +S ++ +YN LIN + +     +  ++
Sbjct: 78  PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + DI+T ++L+ G C   +   A  LV  + +    P+  T++ LI G  +
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFL 197

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M++ GC+P+   +  +++  C+  D D A  +L +M +  +  D +I
Sbjct: 198 HNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + +  GL      + A  LF KME +G+ P  F     I+C    G
Sbjct: 258 YNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYG 304


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 207/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T++ V+H L K R    +E+ LR +++     LP+   +++++Y
Sbjct: 255 FKEMVQRGIPPDLV--TYNSVVHALCKARAMDKAEAFLRQMVNKRV--LPNNWTYNNLIY 310

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR +  LP + + +  + SL    ++
Sbjct: 311 GY-----------------SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 353

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++ N++++ +   G +    ++F  M   G  P   T+N L
Sbjct: 354 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   YN LI G+   G+      L  E++ NG+ +DI+ ++++I  LCK G+   A  
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P+A  YS L+ G C+    E+A +++ +M+ +G  PN  ++  L++ +
Sbjct: 534 IF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 592

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML++ + P +I+ S +  GL   G+   A   F +M   G+
Sbjct: 593 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGI 648



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 165/357 (46%), Gaps = 2/357 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + + N  +        V+ 
Sbjct: 191 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 250

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T N V+HA CK   +++A    + M +   +P+  TYN LI 
Sbjct: 251 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 310

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M ++ I P+V+T + L+   CK GK+ EA  +F  M     +P
Sbjct: 311 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 370

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +YN ++NGY   G       L++ ML +GI  D  T+N LI      G   KA  + 
Sbjct: 371 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 430

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 431 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 490

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
               +A E++ E++   M  D +  S + + L   G+   A  +F      GL P  
Sbjct: 491 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 547



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 51/435 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++SI+L  L    K   ++ +LR + +  +                +C  + + ++ +  
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGA----------------VCSPNVVAYNTVID 240

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +        A D F +M   G  P + + N  + +L  +  +D A  F ++M   R+ P
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +T N +++ +   G  + AV VFK M     +P V T + L+   C  G +  A    
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G  P+V ++N ++ G+  KG L +   +F  M    ++P+  T+N LI  Y   
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 420

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +    ++ EM  +G+K D++TY  +I  LC+ GK   A      +    + P+   Y
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480

Query: 442 SALITGQCVRKNSERAFQL---------------YKSMIRSGCR---------------- 470
           + LI G C   +  +A +L               + S+I + C+                
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540

Query: 471 ----PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
               P+  ++ MLM  +C     ++A  V   M+   + P+ ++   L +G    G+ + 
Sbjct: 541 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 600

Query: 527 AMKLFRKMEIRGLLP 541
            + LFR+M  RG+ P
Sbjct: 601 GLSLFREMLQRGIKP 615



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 170/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+  + +M 
Sbjct: 410 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+ Y  N ++  FC  G + +A E+   + + G    +  ++++I+  C  G + 
Sbjct: 470 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 529

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    +L    G+ P+ + ++ L+ G+C  GK+ +A R+F  M +  + PNVV Y TL+
Sbjct: 530 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 589

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++G  + G SL+ EML+ GIK   + Y+ +I GL + G+T  A     ++ ++ + 
Sbjct: 590 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIA 649

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ ++ G    +  + A  L+K +     + N      ++    Q    + A ++
Sbjct: 650 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 709

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    + P+ +  S + + L   G  E A  +F  M+  G  P
Sbjct: 710 FASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 755



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 170/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      + +  +++ C +       + R ++A
Sbjct: 96  CRSGPALAVALFNRAASRAQGPRVLSPT-----SHTYAILMDCCTR-------AHRPELA 143

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  N+   N ++  FC+    + A+++       +G +P V +Y+ L+ 
Sbjct: 144 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 203

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             C++G    A     +M + G    PNV+ +NT+I GF K+G +++A  +F EM    +
Sbjct: 204 SLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 263

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTYN++++   +    +   +   +M+   +  +  TYN LI G    G+ K+A  
Sbjct: 264 PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVR 323

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ ++S++P+  T S L+   C     + A  ++ +M   G  P+   + ++++ + 
Sbjct: 324 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 383

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +APD    + L     +CG  + AM +F +M   G+ P
Sbjct: 384 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ N+I  N L+ GFC+  +  EA + 
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     +++ YN +I G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TY++++   C  +  ++A    + M+     PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM    + PD + LS L   L   GK + A  +F 
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 362 TMAMKGQNPDVF 373



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 3/241 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+ +L   Y    K   A   F  M   G  P +      ++      R+D  L  ++E
Sbjct: 548 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 607

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG-HCNKG 312
           M +  I P+    ++++    + G    A   F  M   G    + TYN ++ G   N+ 
Sbjct: 608 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 667

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
                  FK L   N ++ N+IT NT+I G  +  ++ EA  +F+ +  + + PNVVTY+
Sbjct: 668 FDEAIFLFKELRAMN-VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYS 726

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDK 431
            +I    + G  E    ++  M   G + +    N ++  L K+ +  +A AYL K  ++
Sbjct: 727 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 786

Query: 432 N 432
           N
Sbjct: 787 N 787



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 353 NRIFSEMKATNV-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           NR  S  +   V SP   TY  L++   +    E+  + + ++LR G++V+I+  N L+ 
Sbjct: 108 NRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 167

Query: 412 GLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-- 468
           G C+  +T +A   L+    +   VP+  +YS L+   C +  S +A  L + M   G  
Sbjct: 168 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 227

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN   +  ++  F +  D ++A ++  EM+++ + PD +  + +   L      + A 
Sbjct: 228 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 287

Query: 529 KLFRKMEIRGLLPKGF 544
              R+M  + +LP  +
Sbjct: 288 AFLRQMVNKRVLPNNW 303



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)

Query: 181 SILYSYRMCDSSPLVFDLLF---KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +ILYS        ++ D LF   +T   + KF   T++       G    I + N  L  
Sbjct: 617 TILYS--------IIIDGLFQAGRTVPAKMKFHEMTES-------GIAMDICTYNIVLRG 661

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L  +   D A+  +KE+R   +  N+ TLN ++    +   +E A ++F ++     +P+
Sbjct: 662 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPN 721

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V TY+ +I+    +GL+  A    + M+  G +PN    N ++    KK ++  A    S
Sbjct: 722 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 781

Query: 358 EMKATNVSPNVVTYNTLINGYGQVG 382
           ++   N S   +T   L++ +   G
Sbjct: 782 KIDERNFSLEHLTAMLLVDLFSSKG 806



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 33/161 (20%), Positives = 72/161 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++ +     + F  A   F ++R       I + N  +  +  + RV+ A   +  + 
Sbjct: 655 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 714

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+R+ PNV T ++++    K G++E A ++F +M++ G  P+    N ++     K  + 
Sbjct: 715 RSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 774

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            A  + + +++       +T   L+  F  KG   E  R  
Sbjct: 775 RAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 163/314 (51%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I S +  ++      RVD  L    ++ +  + P++ T   +++  C  G +++ + ++ 
Sbjct: 97  IHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYD 156

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           +M   G  P+V TYN +I+     G  + A+ F   MEK G  PNV+ ++TLI G+C +G
Sbjct: 157 DMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRG 216

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           ++ EA  +F  M +   +PNV TY +L+NGY ++   E    L +E LR G+  DI+T+ 
Sbjct: 217 QMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFT 276

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I GLC+ G+   A  L + +  +   PN  TY  L+ G C   N E AF L++ M RS
Sbjct: 277 TIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRS 336

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
             +PN  I+ +L+ + C+        E+   ++++ + P+    + L   L   G    A
Sbjct: 337 TVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEA 396

Query: 528 MKLFRKMEIRGLLP 541
            KLFRKME  G  P
Sbjct: 397 HKLFRKMEEDGCTP 410



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 165/319 (51%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L        K       +  M   G  P + + N  ++SL  S + + ALG
Sbjct: 129 EPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALG 188

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F K+M +    PNV   + ++  +C  G ++ A  VF  M S G  P+V TY +L++G+C
Sbjct: 189 FLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYC 248

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A++  +   + G+ P+++TF T+I G C+ G+   A ++F  + A   +PN++
Sbjct: 249 KIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIM 308

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY  L++G  + GN E   +L++EM R+ +K +++ Y  LI  LCK GK K    L   L
Sbjct: 309 TYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRL 368

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               L PN  TY+AL+   C       A +L++ M   GC P+K  + +++  F Q++D 
Sbjct: 369 IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDP 428

Query: 490 DRAAEVLLEMLEKCMAPDS 508
             A +++ EM+ +  + D+
Sbjct: 429 SMARQLVEEMVNRGFSADA 447



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 165/341 (48%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   + H  +         ++   G  P I +    L+ L    ++D  +  Y +M   
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PNVYT N+++++  K G    A+   K ME +G +P+V  Y+TLI G+C +G +  A
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               +LM   G  PNV T+ +L+ G+CK  ++ EA ++  E     + P++VT+ T+I+G
Sbjct: 222 RSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISG 281

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G       L+  +  +G   +I+TY  L+ GLCK G  ++A  L +++ ++++ PN
Sbjct: 282 LCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPN 341

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
              Y+ LI   C     +   +L+  +I  G +PN + +  L+   C+      A ++  
Sbjct: 342 LVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +M E    PD    + +  G        +A +L  +M  RG
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 150/308 (48%), Gaps = 2/308 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+      D    L+D +L   R    +   ++++  + +   K   A     QM 
Sbjct: 137 TLLNGLCMEGKMDQVMMLYDDMLV--RGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + + +  +       ++D A   +  M     +PNVYT   +M+ +CK+  IE
Sbjct: 195 KVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIE 254

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV++       G +P + T+ T+ISG C  G    A +    +  +G  PN++T+  L+
Sbjct: 255 EAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLL 314

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G L EA  +F EM+ + V PN+V Y  LI+   + G  + G  L+  ++  G+K
Sbjct: 315 DGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLK 374

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ TY AL+  LCKEG   +A  L + ++++   P+   Y+ +I G    K+   A QL
Sbjct: 375 PNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQL 434

Query: 461 YKSMIRSG 468
            + M+  G
Sbjct: 435 VEEMVNRG 442



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 153/332 (46%), Gaps = 35/332 (10%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D AL  ++ M   +  P +   + +  +  ++G  E  V + K +E +G    + + + L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+  C+   +   +   + + K G++P+++TF TL+ G C +GK+ +   ++ +M    +
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 365 SPNVVTYN-----------------------------------TLINGYGQVGNSEMGAS 389
            PNV TYN                                   TLI+GY   G  +   S
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           +++ M+  G   ++ TY +L+ G CK  + ++A  L+ +  +  LVP+  T++ +I+G C
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                  A QL++ +   G  PN   + +L+   C++ + + A  +  EM    + P+ +
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           I + L   L  CGK +   +LF ++   GL P
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKP 375



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 113/256 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L   Y  R +   A   F  M   G  P + +    ++     ER++ A+
Sbjct: 198 CVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAV 257

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               E  R  + P++ T   ++   C+ G    A ++F+ + + G  P++ TY  L+ G 
Sbjct: 258 QLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGL 317

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A      M+++ ++PN++ +  LI   CK GK+ +   +FS +    + PNV
Sbjct: 318 CKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNV 377

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY  L+    + G       L+ +M  +G   D   YN +I G  +      A  LV++
Sbjct: 378 YTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEE 437

Query: 429 LDKNSLVPNASTYSAL 444
           +       +A+T + L
Sbjct: 438 MVNRGFSADAATRALL 453



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 54/124 (43%)

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P    +S L +      + E    L K +   G   + H   +L++ FC     D    
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           VL ++L+  + P  +  + L +GL   GK +  M L+  M +RGL P  +     IN   
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 555 ENGE 558
           ++G+
Sbjct: 179 KSGK 182


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/374 (31%), Positives = 183/374 (48%), Gaps = 7/374 (1%)

Query: 174 LPSK---LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM---RDYGFLPI 227
           LP K   LFD + Y +  C  +   F+ +         F  A + +  +   +     P 
Sbjct: 110 LPEKAVGLFDRMAYEFE-CKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPN 168

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + + N  + ++     VD A+  +++M  ++  P+VYT   +M   CK   I+ AV +  
Sbjct: 169 VLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLD 228

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M+  G  PS  T+N LI+G C KG L+   K  + M   G  PN +T+NTLI G C KG
Sbjct: 229 EMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKG 288

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A  +   M ++   PNVVTY T+ING  + G +  GA +   M   G  V+   Y+
Sbjct: 289 KLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYS 348

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           ALI GL KEGK+++A  L K++       N   YSA+I G C     + A ++   M  +
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
            C+PN + +  LM  F +  +  +A E+  +M +     + +  S L  GL   GK + A
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 528 MKLFRKMEIRGLLP 541
           M ++ +M  +G  P
Sbjct: 469 MMVWAQMLGKGCKP 482



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 192/383 (50%), Gaps = 3/383 (0%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRN 211
           R  KS  S+L  I+    F    + ++ ++ + +  + SP  L F+L+ KT        +
Sbjct: 129 RTVKSFNSVLNVIIQEGLFYRALEFYNHVIGA-KGVNISPNVLTFNLVIKTMCKVGLVDD 187

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M      P + +    +  L  ++R+D A+    EM+ +   P+  T N++++
Sbjct: 188 AVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLIN 247

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G + R  ++  NM   G  P+  TYNTLI G C KG L  A+   + M  +   P
Sbjct: 248 GLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVP 307

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+T+ T+I G  K+G+  +  R+ + M+      N   Y+ LI+G  + G S+    L+
Sbjct: 308 NVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLF 367

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM     +++ + Y+A+I GLC++GK  +A  ++ ++  N   PNA TYS+L+ G    
Sbjct: 368 KEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEA 427

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N  +A +++K M +     N+  + +L+   C++     A  V  +ML K   PD +  
Sbjct: 428 GNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAY 487

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
             + +GL + G  E A++L+ +M
Sbjct: 488 GSMINGLSNAGLVEDALQLYNEM 510



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 154/351 (43%), Gaps = 4/351 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +D  D    L D +      C  SP+ F++L      +            M 
Sbjct: 209 TLMDGLCKADRIDEAVSLLDEM--QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMF 266

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + N  +  L    +++ A+     M  ++  PNV T   +++   K G   
Sbjct: 267 LKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRAL 326

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
               V   ME  G+  +   Y+ LISG   +G    AM+    M     + N I ++ +I
Sbjct: 327 DGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVI 386

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C+ GK  EA  + SEM      PN  TY++L+ G+ + GN      ++++M ++   
Sbjct: 387 DGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFT 446

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + + Y+ LI GLCK+GK K+A  +   +      P+   Y ++I G       E A QL
Sbjct: 447 QNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQL 506

Query: 461 YKSMI--RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           Y  M+      +P+   + +L++  C+     RA ++L  ML++   PD +
Sbjct: 507 YNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLV 557



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 173/390 (44%), Gaps = 44/390 (11%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           SY++ DS+   F  L   YA+   F++      +MR    + ++E C   +        +
Sbjct: 55  SYKLGDST---FYSLIDNYANLGDFKSLEKVLDRMRCEKRV-VVEKCFVVIFKAYGKAHL 110

Query: 245 -DIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNM---ESMGFIPSVT 299
            + A+G +  M         V + N V++   + G+  RA+E + ++   + +   P+V 
Sbjct: 111 PEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVL 170

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T+N +I   C  GL+  A++    M  +  QP+V T+ TL+ G CK  ++ EA  +  EM
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +     P+ VT+N LING  + G+    A L + M   G   + +TYN LI GLC +GK 
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 420 KKAAYLVKDLDKNSLVPNAST-----------------------------------YSAL 444
           +KA  L+  +  +  VPN  T                                   YSAL
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+G      S+ A QL+K M    C  N  ++  ++   C++   D A EVL EM     
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKM 534
            P++   S L  G    G    A+++++ M
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/277 (20%), Positives = 124/277 (44%), Gaps = 16/277 (5%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           + + C+ + +V+  +        K   A +   +M +    P   + +  +    ++   
Sbjct: 371 TVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNG 430

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A+  +K+M ++  + N    ++++H  CK G ++ A+ V+  M   G  P V  Y ++
Sbjct: 431 HKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSM 490

Query: 305 ISGHCNKGLLSLAMKFKN--LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           I+G  N GL+  A++  N  L ++   QP+V+T+N L+   CK+  +  A  + + M   
Sbjct: 491 INGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDR 550

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P++VT    +             +L E++       + L  + L++ L K  +   A
Sbjct: 551 GCDPDLVTCIIFLR------------TLREKLDPPQDGREFL--DGLVVRLLKRQRVLGA 596

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + +V+ + +  L P  ST++ ++   C  K  + A Q
Sbjct: 597 SKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 2/320 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + +    ++ L      D+AL    +M + +I  +V   + V+ + CK   ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +F  M++ G  P V TY++LIS  CN G  S A +  + M +  I PNV+TFN+LI  
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           F K+GKL EA ++F EM   ++ PN+VTYN+LING+      +    ++  M+      D
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TYN LI G CK  K      L +D+ +  LV N  TY+ LI G     + + A  ++K
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC 521
            M+  G  PN   +  L+   C+N   ++A  V+ E L+K  M PD    + +  G+   
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKA 498

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK E    LF  + ++G+ P
Sbjct: 499 GKVEDGWDLFCSLSLKGVKP 518



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 176/345 (51%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  +++  +  +    +   +A + F +M + G  P + + +  +S L +  R   A  
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PNV T N ++ AF K G +  A ++F  M      P++ TYN+LI+G C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +   LM      P+V+T+NTLI GFCK  K+ +   +F +M    +  N V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI+G+ Q  + +    ++++M+ +G+  +I+TYN L+ GLCK GK +KA  + + L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ + P+  TY+ +  G C     E  + L+ S+   G +P+   +  ++S FC+    
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           + A  + ++M E    PDS   + L       G    + +L ++M
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 159/327 (48%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + SL     VD AL  + EM    I P+V+T + ++   C  G    A  +  +M     
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+V T+N+LI     +G L  A K  + M +  I PN++T+N+LI GFC   +L EA +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           IF+ M + +  P+VVTYNTLING+ +      G  L+ +M R G+  + +TY  LI G  
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           +      A  + K +  + + PN  TY+ L+ G C     E+A  +++ + +S   P+ +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + ++    C+    +   ++   +  K + PD I  + + SG    G  E A  LF KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKES 561
           +  G LP        I     +G+K +
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAA 573



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 35/368 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A D F +M      P I   +K LS++   ++ D+ + F ++M    +S N+YT N
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  C+   +  A+ +   M  +G+ PS+ T N+L++G C+   +S A+   + M + 
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM- 386
           G QP+ +TF TL+ G  +  K  EA  +   M      P++VTY  +ING  + G  ++ 
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224

Query: 387 ----------------------------------GASLYEEMLRNGIKVDILTYNALILG 412
                                               +L+ EM   GI+ D+ TY++LI  
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G+   A+ L+ D+ +  + PN  T+++LI           A +L+  MI+    PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L++ FC ++  D A ++   M+ K   PD +  + L +G     K    M+LFR
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404

Query: 533 KMEIRGLL 540
            M  RGL+
Sbjct: 405 DMSRRGLV 412



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 149/301 (49%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + N  + +     ++  A   + EM +  I PN+ T N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A ++F  M S   +P V TYNTLI+G C    +   M+    M + 
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+ TLI GF +      A  +F +M +  V PN++TYNTL++G  + G  E  
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + ++ ++ DI TYN +  G+CK GK +    L   L    + P+   Y+ +I+G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C +   E A+ L+  M   G  P+   +  L+    ++ D   +AE++ EM     A D
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589

Query: 508 S 508
           +
Sbjct: 590 A 590



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 2/284 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + F+ L   +A   K   A   F +M      P I + N  ++     +R+D 
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +  M      P+V T N +++ FCK   +   +E+F++M   G + +  TY TLI 
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G         A      M  +G+ PN++T+NTL+ G CK GKL +A  +F  ++ + + P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++ TYN +  G  + G  E G  L+  +   G+K D++ YN +I G CK+G  ++A  L 
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             + ++  +P++ TY+ LI       +   + +L K M RS CR
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RS-CR 585



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 3/270 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLFD ++   R  D + + ++ L   +    +   A   F  M     LP + + N  ++
Sbjct: 331 KLFDEMIQ--RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               +++V   +  +++M R  +  N  T   ++H F +    + A  VFK M S G  P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++ TYNTL+ G C  G L  AM     ++K+ ++P++ T+N +  G CK GK+ +   +F
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V P+V+ YNT+I+G+ + G  E   +L+ +M  +G   D  TYN LI    ++
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           G    +A L+K++       +ASTY  L+T
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTY-GLVT 597



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 103/222 (46%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ F+ L+    K  K         +M+   VS N+ TYN +IN   +        ++
Sbjct: 63  PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G    I+T N+L+ G C   +  +A  LV  + +    P+  T++ L+ G   
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L + M+  GC+P+   +  +++  C+  + D A  +L +M +  +  D +I
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            S +   L      + A+ LF +M+ +G+ P  F     I+C
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 35/213 (16%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL EA  +F EM  +   P++V ++ L++   ++   ++  S  E+M   G+  ++ TYN
Sbjct: 45  KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I                     N L              C R     A  +   M++ 
Sbjct: 105 IMI---------------------NCL--------------CRRSQLSFALAILGKMMKL 129

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P+      L++ FC       A  ++ +M+E    PD++  + L  GL    K   A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           + L  +M ++G  P        IN   + GE +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 178/368 (48%), Gaps = 3/368 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL DS+  S +   +S   ++ L      R   R A     +M + G +P + + N  + 
Sbjct: 295 KLVDSMRLSKK---ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIH 351

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            LL  E+ + A   + EMR   + P+V T N +++ +CK G ++ A+ +  ++   G  P
Sbjct: 352 GLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAP 411

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TYNTLI G+C  G L+ A + K  M + G  P+V T+  L+ G  K   L  A   F
Sbjct: 412 TVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFF 471

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM +  + P+   YNT I     + ++ M   L E M+  GI  D +TYN +I GLCK 
Sbjct: 472 DEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKT 531

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  K A  L   +  + L P+  TY+ LI   C R     A +L   M+  G +P+   +
Sbjct: 532 GNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTY 591

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +L+ T C+  +   A     +ML+  + P+ I  + L   L   G+  LA + F +M  
Sbjct: 592 TILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLE 651

Query: 537 RGLLPKGF 544
           RGL P  +
Sbjct: 652 RGLAPNKY 659



 Score =  131 bits (330), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 3/244 (1%)

Query: 207 KKFRN---ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           +K RN   A + F +M   G  P   + N  + + L      +A    + M    I P+ 
Sbjct: 459 RKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDT 518

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T N+++   CK G ++ A  +   M S G  P   TY  LI  HC +GLL  A K  N 
Sbjct: 519 VTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNG 578

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M  +G+QP+V+T+  L+   C++G L+ A   F +M    + PN +TYN LI+     G 
Sbjct: 579 MVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGR 638

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           + +    + EML  G+  +  TY  LI G C+EG    A  L  ++ +N + P+  T++A
Sbjct: 639 TPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNA 698

Query: 444 LITG 447
           L  G
Sbjct: 699 LFKG 702



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 132/290 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++ L   Y        A     +M + G  P + +    ++       + +A  F+ E
Sbjct: 414 LTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDE 473

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N  + A   L     A ++ + M   G  P   TYN +I G C  G 
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A + K  M  +G+QP+ IT+  LI   C++G L EA ++ + M +  + P+VVTY  
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++   + GN       + +ML  GI+ + +TYN LI  LC  G+T  A     ++ +  
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L PN  TY+ LI G C   N   A +LY  M ++G  P+      L   F
Sbjct: 654 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 703



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 140/356 (39%), Gaps = 71/356 (19%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P +  CN+ L  L D+ R D     Y EM + R+ P                    
Sbjct: 196 HGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEP-------------------- 235

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-------IQPNVI 334
                          ++ TYNTL+     +G    A      ME  G       +  NV+
Sbjct: 236 ---------------TIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVV 280

Query: 335 -----------------------------TFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                                        T+N LI    ++G + +A  +  EM+   + 
Sbjct: 281 ISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIM 340

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P VVTYN +I+G  +   +E     + EM   G+  D++TYN+L+   CK G  K+A +L
Sbjct: 341 PTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWL 400

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + DL +  L P   TY+ LI G C   +   A +L + M+  GC P+   + +LM+   +
Sbjct: 401 LGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRK 460

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +   A E   EML K + PD    +             +A +L   M ++G+ P
Sbjct: 461 VRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYP 516



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 110/263 (41%), Gaps = 36/263 (13%)

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +L +    L+  +G+ P+V   N ++       +  +   ++ EM    V P +VTYNTL
Sbjct: 184 TLCLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTL 243

Query: 375 INGYGQVGNSEMGASLYEEM--------------------------LRNGIK-VDIL--- 404
           ++ + + G  +  + L +EM                          L N +K VD +   
Sbjct: 244 LDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLS 303

Query: 405 ------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                 TYN LI  L + G  +KA  L  +++   ++P   TY+A+I G    + +E A 
Sbjct: 304 KKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQ 363

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +  M   G  P+   +  L++ +C+  +   A  +L ++    +AP  +  + L  G 
Sbjct: 364 VKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGY 423

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G    A +L  +M  +G  P
Sbjct: 424 CRLGDLAEARRLKEEMVEQGCFP 446



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 51/116 (43%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + + +L  T   R    +A   F +M D G  P   + N  + +L  + R  +A   +
Sbjct: 587 SVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHF 646

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
            EM    ++PN YT  +++   C+ G    A+ ++  M   G  P   T+N L  G
Sbjct: 647 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 181/391 (46%), Gaps = 35/391 (8%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L        +     + F +MR+    P + +    + +L +S R   A+
Sbjct: 35  CRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAI 94

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EMR     PN++T  ++++A CK   +E    +   M   G +PSV TYN LI G+
Sbjct: 95  NLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGY 154

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A +  +LM  N   PN  T+N LI GFC+K  +H A  + S+M  + ++P+V
Sbjct: 155 CKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSV 214

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN+LI+G  ++G  +    L   M  NG+  D  TY+  I  LCK+G+ ++A  L   
Sbjct: 215 VTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNS 274

Query: 429 L--------------------------DKNSL---------VPNASTYSALITGQCVRKN 453
           L                          D NSL         +PN+STY+ALI G C  + 
Sbjct: 275 LKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERK 334

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A  L +SMI+ G +     + +L+    +  DFD A  +L +M+     PD  I + 
Sbjct: 335 VQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTA 394

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                   G  + A  +   M  RG++P   
Sbjct: 395 FIHAFCTRGNIKEAEDMMSMMFERGVMPDAL 425



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 184/383 (48%), Gaps = 21/383 (5%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ T+++++H L     F+S   +       ++ +L S++ +      R C+ +   + +
Sbjct: 73  TVRTYTVIVHAL-----FESGRRM-------EAINLFSEMRE------RGCEPNIHTYTV 114

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           +        K         +M + G +P + + N  +        V+ A      M  N 
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
            +PN  T N ++  FC+   + RA+ +   M      PSV TYN+LI G C  G L  A 
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  NLM +NG+ P+  T++  I   CKKG++ EAN +F+ +K   +  N V Y  LI+GY
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +   SL + ML      +  TYNALI GLCKE K ++A  L++ + +  L    
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTV 354

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI       + + A ++   M+ SG +P+ +I+   +  FC   +   A +++  
Sbjct: 355 PTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSM 414

Query: 499 MLEKCMAPDSI---ILSELYSGL 518
           M E+ + PD++   ++ + Y GL
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGL 437



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 142/290 (48%), Gaps = 5/290 (1%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K  RRN +S   YT N++ H  C++G ++  + +FK M      P+V TY  ++      
Sbjct: 33  KGCRRNEVS---YT-NLI-HGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFES 87

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A+   + M + G +PN+ T+  +I   CK+ KL E  RI  EM    + P+V TY
Sbjct: 88  GRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTY 147

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI+GY + G  E    + + M  N    +  TYN LI G C++    +A  L+  + +
Sbjct: 148 NALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLE 207

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           + L P+  TY++LI GQC     + A++L   M  +G  P++  + + + T C+    + 
Sbjct: 208 SRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEE 267

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +   + EK +  + +I + L  G    GK + A  L  +M     LP
Sbjct: 268 ANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP 317



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 170/426 (39%), Gaps = 64/426 (15%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y        A +    M      P   + N+ +      + V  A+    +M 
Sbjct: 147 YNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKML 206

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +R++P+V T N ++H  CK+G ++ A  +   M   G +P   TY+  I   C KG + 
Sbjct: 207 ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIE 266

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N +++ GI+ N + +  LI G+CK GK+ +AN +   M   +  PN  TYN LI
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALI 326

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +    +    L E M++ G+K  + TY  LI+ + KEG    A  ++  +  +   
Sbjct: 327 DGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQ 386

Query: 436 PNASTYSALITGQCVRKNSER-----------------------------------AFQL 460
           P+   Y+A I   C R N +                                    AF +
Sbjct: 387 PDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDV 446

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE-----------------------------DFDR 491
            K M  +GC P+ H +  L+    + E                              F+ 
Sbjct: 447 LKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFET 506

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A E+  +MLE   +P+    ++L  GL   G+  +A KLF  M  RG+ P        +N
Sbjct: 507 ALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLN 566

Query: 552 CAPENG 557
           C  E G
Sbjct: 567 CCCELG 572



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 128/280 (45%), Gaps = 9/280 (3%)

Query: 269 VMHAFCKLG---------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +++ +CKLG          +  A  VF  M   G   +  +Y  LI G C  G +   + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M ++   P V T+  ++    + G+  EA  +FSEM+     PN+ TY  +IN   
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +    E G  + +EM+  G+   + TYNALI G CKEG  + A  ++  +  NS  PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ LI G C +KN  RA  L   M+ S   P+   +  L+   C+    D A  +L  M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            E  + PD    S     L   G+ E A  LF  ++ +G+
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGI 280



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 124/250 (49%), Gaps = 9/250 (3%)

Query: 304 LISGHCNKGLL---------SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +++G+C  G L         + A    N+M K G + N +++  LI G C+ G++ E   
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           IF +M+  +  P V TY  +++   + G      +L+ EM   G + +I TY  +I  +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           KE K ++   ++ ++ +  LVP+  TY+ALI G C     E A ++   M  + C PN+ 
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+  FC+ ++  RA  +L +MLE  + P  +  + L  G    G  + A +L   M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 535 EIRGLLPKGF 544
              G++P  +
Sbjct: 241 NENGVVPDQW 250



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 157/370 (42%), Gaps = 16/370 (4%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD----SERVDIALGFY 251
           + +   T   + +   A   F  +++ G    I++     ++L+D    + ++D A    
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKG----IKANEVIYTALIDGYCKAGKMDDANSLL 307

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M      PN  T N ++   CK   ++ A+ + ++M   G   +V TY  LI     +
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKE 367

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A +  + M  +G QP+V  +   I  FC +G + EA  + S M    V P+ +TY
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             +I+ YG +G       + + M   G      TY+ LI  L KE  TKK     K++  
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK----YKNVAL 483

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              +PN   + A +         E A +L++ M+  GC PN + +  L+   C+      
Sbjct: 484 CDSIPN--VFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A ++   M E+ ++P   I + L +     G    A++L   M   G LP   + L  + 
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPL-LESLNVLF 600

Query: 552 CA-PENGEKE 560
           C   E G KE
Sbjct: 601 CGLYEEGSKE 610



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 164/394 (41%), Gaps = 18/394 (4%)

Query: 152 KNRKFKSSESILRGILD----SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
           K +  K++E I   ++D    +   D  + L D +L    + +SS   ++ L       +
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSS--TYNALIDGLCKER 333

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K + A      M   G    + +    + ++L     D A     +M  +   P+VY   
Sbjct: 334 KVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYT 393

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             +HAFC  G I+ A ++   M   G +P   TY  +I  +   GLL+ A      M   
Sbjct: 394 AFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDT 453

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G  P+  T++ LI    K+    E  + +  +   +  PNV   +  +    ++   E  
Sbjct: 454 GCDPSHHTYSCLIKHLLKE----ELTKKYKNVALCDSIPNVFFAD--VADVWKMMKFETA 507

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L+E+ML +G   +I TY  LI+GLCK G+   A  L   +++  + P+ + Y++L+  
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ--NEDFDRAAEVLLEMLEKC-M 504
            C       A +L  +M+  G  P   + E L   FC    E     A+V+   L +C  
Sbjct: 568 CCELGIYGDAVRLVGAMMEHGHLP---LLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGY 624

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             D +    L  GL   G  +   +L   ME RG
Sbjct: 625 NDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 125/313 (39%), Gaps = 47/313 (15%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           YAHR           QM   G+ P +     F+ +      +  A      M    + P+
Sbjct: 372 YAHR--------ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPD 423

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL--SLAMKF 320
             T  +V+ A+  LG++  A +V K M   G  PS  TY+ LI     K LL   L  K+
Sbjct: 424 ALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI-----KHLLKEELTKKY 478

Query: 321 KNL--------------------------------MEKNGIQPNVITFNTLIFGFCKKGK 348
           KN+                                M ++G  PN+ T+  LI G CK G+
Sbjct: 479 KNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGR 538

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L  A ++F  M    VSP+   YN+L+N   ++G       L   M+ +G    + + N 
Sbjct: 539 LGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNV 598

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L  GL +EG  +KA  +  +L +     +   +  LI G      S+   +L   M   G
Sbjct: 599 LFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARG 658

Query: 469 CRPNKHIFEMLMS 481
           C+ +   + ML+ 
Sbjct: 659 CQIHPQTYRMLIE 671



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 109/256 (42%), Gaps = 6/256 (2%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
             L + L+   Y        A D   +M D G  P   + +  +  LL  E        Y
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKK----Y 478

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K +      PNV+  ++      K+   E A+E+F+ M   G  P++ TY  LI G C  
Sbjct: 479 KNVALCDSIPNVFFADVA--DVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKV 536

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L +A K  + M + G+ P+   +N+L+   C+ G   +A R+   M      P + + 
Sbjct: 537 GRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESL 596

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N L  G  + G+ E    ++  +L+ G   D + +  LI GL K G +   + L+  ++ 
Sbjct: 597 NVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEA 656

Query: 432 NSLVPNASTYSALITG 447
                +  TY  LI G
Sbjct: 657 RGCQIHPQTYRMLIEG 672



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 114/249 (45%), Gaps = 24/249 (9%)

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR---KKFRNATDTFCQMRDYGFLPI 227
           +FD+  ++FD+       CD S   +  L K        KK++N     C       +P 
Sbjct: 443 AFDVLKRMFDT------GCDPSHHTYSCLIKHLLKEELTKKYKNVA--LCDS-----IP- 488

Query: 228 IESCNKFLSSLLDSERV---DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
               N F + + D  ++   + AL  +++M  +  SPN+ T   ++   CK+G +  A +
Sbjct: 489 ----NVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQK 544

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +F +M   G  PS   YN+L++  C  G+   A++    M ++G  P + + N L  G  
Sbjct: 545 LFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLY 604

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G   +A  +FS +     + + V +  LI+G  + G S+  + L   M   G ++   
Sbjct: 605 EEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQ 664

Query: 405 TYNALILGL 413
           TY  LI GL
Sbjct: 665 TYRMLIEGL 673


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 182/361 (50%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            ++  H  KF +A   FC+M     +P I    + L+++    + DI +  + +M    I
Sbjct: 587 LRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGI 646

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           S ++Y+  +++H FC+      A+ +   M  +GF PS+ T  +L++G C       A+ 
Sbjct: 647 SHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVS 706

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + M + G++PNV+ +NT+I G CK   L+ A  IF  M+   +  + VTYNTLI+G  
Sbjct: 707 LVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLC 766

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G     A L  +M++  I  +++ + ALI    KEG   +A  L K++ + S+ PN  
Sbjct: 767 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNIL 826

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY++LI G C++     A  ++  M+  GC P+   +  L++ FC+++  +   ++  EM
Sbjct: 827 TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
             + +  D+   + L  G    GK  +A K+F +M   G+ P        ++C   NG+ 
Sbjct: 887 THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946

Query: 560 E 560
           E
Sbjct: 947 E 947



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 178/384 (46%), Gaps = 5/384 (1%)

Query: 179  FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
            FD ++Y +   ++  +  DL     L   +    +F  A     +M   GF P I +   
Sbjct: 631  FDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGS 690

Query: 234  FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
             L+      R   A+     M    + PNV   N V++  CK   +  A+E+F  ME  G
Sbjct: 691  LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750

Query: 294  FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             +    TYNTLISG CN G  + A +    M K  I PNVI F  LI  F K+G L EA 
Sbjct: 751  IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810

Query: 354  RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
             ++ EM   +V PN++TYN+LING+   G       +++ M+  G   D++TYN LI G 
Sbjct: 811  NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870

Query: 414  CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            CK  + +    L  ++    LV +A TY+ LI G C       A +++  M+  G  P+ 
Sbjct: 871  CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930

Query: 474  HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
              + +L+   C N   ++A  ++ ++ +  M  D I  + +  G+    K + A  LFR 
Sbjct: 931  VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS 990

Query: 534  MEIRGLLPKGFDKLRTINCAPENG 557
            +  +G+       +  I+    NG
Sbjct: 991  LTRKGVKLDAIAYITMISGLCRNG 1014



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 175/353 (49%), Gaps = 2/353 (0%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            S+L G    + F     L DS+  +    + + ++++ +       +   NA + F  M 
Sbjct: 690  SLLNGFCQGNRFQEAVSLVDSM--AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGME 747

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
              G +    + N  +S L +S R   A    ++M + +I PNV     ++  F K G + 
Sbjct: 748  KKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 807

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             A  ++K M      P++ TYN+LI+G C +G L  A    +LM   G  P+V+T+NTLI
Sbjct: 808  EAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLI 867

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             GFCK  ++ +  ++F EM    +  +  TYNTLI+GY Q G   +   ++  M+  G+ 
Sbjct: 868  TGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVP 927

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             DI+TYN L+  LC  GK +KA  +V+DL KN +  +  TY+ +I G C     + A+ L
Sbjct: 928  PDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCL 987

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++S+ R G + +   +  ++S  C+N     A ++   M E    P   I  E
Sbjct: 988  FRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDE 1040



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 171/340 (50%), Gaps = 1/340 (0%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + H  +F +A D F +M     LP +    + L+++ +  R +  + F ++M    IS +
Sbjct: 40  FLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHD 99

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           +Y+  +++H FC+   +  A+ +   M  +G+ PS+ T+ +L+ G C +  +  A     
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQV 381
            M K+G +PNV+ +NTLI   CK G ++ A  + +EM K   ++ ++VTYNTL+ G    
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G     A +  +M +  I  D+ T+ ALI    K+G   +A  L K + ++S+ PN  TY
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++LI G C+      A + +  M   GC PN   +  L++ FC++   +   ++   M  
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  D+   + L  G    GK  +A  +F  M   G+ P
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 178/373 (47%), Gaps = 2/373 (0%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR  L    FD    LF  +L S  +   S + F  +    A   KF      F +M + 
Sbjct: 587 LRSELHCIKFDDAFGLFCEMLQSRPI--PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENL 644

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G    + S    +       R  +AL    +M +    P++ TL  +++ FC+    + A
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEA 704

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V +  +M  +G  P+V  YNT+I+G C    L+ A++    MEK GI  + +T+NTLI G
Sbjct: 705 VSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISG 764

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C  G+  +A R+  +M    + PNV+ +  LI+ + + GN     +LY+EM+R  +  +
Sbjct: 765 LCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPN 824

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ILTYN+LI G C +G+   A ++   +      P+  TY+ LITG C  K  E   +L+ 
Sbjct: 825 ILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 884

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   G   +   +  L+  +CQ    + A +V   M++  + PD +  + L   L + G
Sbjct: 885 EMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNG 944

Query: 523 KDELAMKLFRKME 535
           K E A+ +   ++
Sbjct: 945 KIEKALVMVEDLQ 957



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 3/377 (0%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E +  G L S  F+    LF  ++ S  +   S + F  L    A+ +++        QM
Sbjct: 34  EKLRTGFLHSIRFEDALDLFLEMVQSQPL--PSVVDFTRLLTAIANLRRYETVIYFSQQM 91

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
             +G    + S    +       R+ +AL    +M +    P++ T   ++H FC    I
Sbjct: 92  ELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRI 151

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-IQPNVITFNT 338
             A  +  +M   G+ P+V  YNTLI   C  G +++A++  N MEK G +  +++T+NT
Sbjct: 152 HDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNT 211

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G C  G+  +A RI  +M    ++P+V T+  LI+ + + GN +    LY++ML++ 
Sbjct: 212 LLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSS 271

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  + +TYN+LI GLC  G+   A      +      PN  TY+ LI G C  +  E   
Sbjct: 272 IGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM 331

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L++ M R G   +   +  L+  +CQ      A ++   M+   + PD I    L  GL
Sbjct: 332 KLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391

Query: 519 HHCGKDELAMKLFRKME 535
              G+   AM  F  M 
Sbjct: 392 CVNGEIGSAMVKFNDMR 408



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 172/361 (47%), Gaps = 9/361 (2%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D S + F  L   +  R +  +A      M   G+ P +   N  +  L  +  V+IAL 
Sbjct: 132 DPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALE 191

Query: 250 FYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              EM ++ R++ ++ T N ++   C  G   +A  + ++M      P V T+  LI   
Sbjct: 192 LLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAF 251

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G L  A +    M ++ I PN +T+N+LI G C  G+L+ A + F  M +    PNV
Sbjct: 252 VKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNV 311

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLING+ +    E G  L++ M R G+  D  TYN LI G C+ GK + A  +   
Sbjct: 312 VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSW 371

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI----FEMLMSTFC 484
           +    + P+  T+  L+ G CV      A   +  M RSG    K++    + +++   C
Sbjct: 372 MVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDM-RSG---EKYLGIVAYNIMIHGLC 427

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + +  + A E+   +  + + PD+   + +  GL   G    A +LFR+M+  G++ +  
Sbjct: 428 KADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE 487

Query: 545 D 545
           D
Sbjct: 488 D 488



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 179/393 (45%), Gaps = 16/393 (4%)

Query: 132 THKPSSLTLETH--------SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           +H   S T+  H        S+ L IL K  K     SI+        F L +++ D+  
Sbjct: 97  SHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFS 156

Query: 184 YSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI-IESCNKFLSSL 238
               M  S    + +V++ L            A +   +M   G L   + + N  L+ L
Sbjct: 157 LVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGL 216

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             S     A    ++M + RI+P+V+T   ++ AF K G ++ A E++K M      P+ 
Sbjct: 217 CYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNT 276

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN+LI+G C  G L  A K  +LM   G  PNV+T+NTLI GFCK  ++ +  ++F  
Sbjct: 277 VTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQR 336

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    +  +  TYNTLI+GY QVG   +   ++  M+  G+  DI+T+  L+ GLC  G+
Sbjct: 337 MYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGE 396

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A     D+           Y+ +I G C     E A++L+  +   G +P+   + +
Sbjct: 397 IGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTI 456

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEK---CMAPDS 508
           ++   C+N     A E+   M E    C A D 
Sbjct: 457 MILGLCKNGPRREADELFRRMKEDGIICQAEDG 489



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           K  +  L S R + AL  + EM +++  P+V     ++ A   L   E  +   + ME  
Sbjct: 35  KLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELF 94

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G    + ++  LI   C    LSLA+     M K G  P+++TF +L+ GFC + ++H+A
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-IKVDILTYNALIL 411
             + + M  +   PNVV YNTLI+   + G+  +   L  EM + G +  D++TYN L+ 
Sbjct: 155 FSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLT 214

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+ ++AA +++D+ K  + P+  T++ALI     + N + A +LYK M++S   P
Sbjct: 215 GLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGP 274

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  L++  C +     A +    M  K   P+ +  + L +G     + E  MKLF
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334

Query: 532 RKMEIRGLLPKGF 544
           ++M   GL+   F
Sbjct: 335 QRMYREGLVGDTF 347



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/232 (19%), Positives = 103/232 (44%), Gaps = 2/232 (0%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            S++ G            +FD  L   + C    + ++ L   +   K+  +    FC+M 
Sbjct: 830  SLINGFCIQGRLGDAKHMFD--LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
              G +    + N  +     + ++++A   +  M    + P++ T N+++   C  G IE
Sbjct: 888  HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIE 947

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            +A+ + ++++       + TYN +I G C    +  A      + + G++ + I + T+I
Sbjct: 948  KALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMI 1007

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             G C+ G   EA+++ + MK     P+   Y+  +  +    ++E+  +++E
Sbjct: 1008 SGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYTSLSAELIKAVHE 1059


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 177/351 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  +++  +     + K   +A + F +M + G  P + + N  +  L +  R   A  
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PNV T + ++ AF K G +  A +++  M      P + TY++LI+G C
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A     LM      PNV+T+NTLI GFCK  ++ E   +F EM    +  N V
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI G  Q G+ +M   ++++M+ +G+  DI+TY+ L+ GLCK GK +KA  + + L
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 475

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ + P+  TY+ +I G C     E  + L+ S+   G +PN  I+  ++S FC+    
Sbjct: 476 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 535

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + A  +  EM E    P+S   + L       G    + +L ++M   G +
Sbjct: 536 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 586



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 171/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+     +R+  A+    +M 
Sbjct: 102 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 161

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N ++H          AV +   M + G  P + TY T+++G C +G + 
Sbjct: 162 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 221

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+     MEK  I+ +V+ + T+I   C    +++A  +F+EM    + PNVVTYN+LI
Sbjct: 222 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 281

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 G     + L  +M+   I  +++T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 282 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 341

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+LI G C+    + A  +++ MI   C PN   +  L+  FC+ +  +   E+
Sbjct: 342 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 401

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM ++ +  +++  + L  GL   G  ++A K+F+KM   G+ P
Sbjct: 402 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 447



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 171/364 (46%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+   A     QM    + P   + N  +  L    +   A+     M    
Sbjct: 140 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 199

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+++T   V++  CK G I+ A+ + K ME       V  Y T+I   CN   ++ A+
Sbjct: 200 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 259

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M+  GI+PNV+T+N+LI   C  G+  +A+R+ S+M    ++PNVVT++ LI+ +
Sbjct: 260 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 319

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       LY+EM++  I  DI TY++LI G C   +  +A ++ + +      PN 
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M + G   N   +  L+    Q  D D A ++  +
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + PD I  S L  GL   GK E A+ +F  ++   + P  +     I    + G+
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499

Query: 559 KESG 562
            E G
Sbjct: 500 VEDG 503



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 44/404 (10%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F L    F +  Y YR   S  ++ DL         K  +A D F +M     LP I   
Sbjct: 17  FSLRGVYFSAASYDYREKLSRNVLLDL---------KLDDAVDLFGEMVQSRPLPSIVEF 67

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK LS++    + D+ +   + M+  RIS ++Y+ N++++ FC+   +  A+ V   M  
Sbjct: 68  NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 127

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G+ P + T ++L++G+C+   +S A+   + M     QPN +TFNTLI G     K  E
Sbjct: 128 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 187

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS---------------------- 389
           A  +   M A    P++ TY T++NG  + G+ ++  S                      
Sbjct: 188 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 247

Query: 390 -------------LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
                        L+ EM   GI+ +++TYN+LI  LC  G+   A+ L+ D+ +  + P
Sbjct: 248 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 307

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  T+SALI           A +LY  MI+    P+   +  L++ FC ++  D A  + 
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             M+ K   P+ +  + L  G     + E  M+LFR+M  RGL+
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 411



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 160/299 (53%), Gaps = 2/299 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D+AL   K+M + +I  +V     ++ A C    +  A+ +F  M++ G  P+V TYN+
Sbjct: 220 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 279

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   CN G  S A +  + M +  I PNV+TF+ LI  F K+GKL EA +++ EM   +
Sbjct: 280 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 339

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++ TY++LING+      +    ++E M+      +++TYN LI G CK  + ++  
Sbjct: 340 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L +++ +  LV N  TY+ LI G     + + A +++K M+  G  P+   + +L+   
Sbjct: 400 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 459

Query: 484 CQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+    ++A  V+ E L+K  M PD    + +  G+   GK E    LF  + ++G+ P
Sbjct: 460 CKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 517



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 162/330 (49%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +L + + V+ AL  + EM    I PNV T N ++   C  G    A  +  +M    
Sbjct: 245 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 304

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V T++ LI     +G L  A K  + M K  I P++ T+++LI GFC   +L EA 
Sbjct: 305 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 364

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F  M + +  PNVVTYNTLI G+ +    E G  L+ EM + G+  + +TYN LI GL
Sbjct: 365 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 424

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            + G    A  + K +  + + P+  TYS L+ G C     E+A  +++ + +S   P+ 
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           + + +++   C+    +   ++   +  K + P+ II + + SG    G  E A  LFR+
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           M+  G LP        I     +G+K +  
Sbjct: 545 MKEDGTLPNSGTYNTLIRARLRDGDKAASA 574



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 163/326 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L +   +  ++ +A+     M +    P + + +  + + +   ++  A   Y E
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+++T + +++ FC    ++ A  +F+ M S    P+V TYNTLI G C    
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +   M+    M + G+  N +T+NTLI G  + G    A +IF +M +  V P+++TY+ 
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  + G  E    ++E + ++ ++ DI TYN +I G+CK GK +    L   L    
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN   Y+ +I+G C +   E A  L++ M   G  PN   +  L+    ++ D   +A
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 574

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLH 519
           E++ EM       D+  +S + + LH
Sbjct: 575 ELIKEMRSCGFVGDASTISMVINMLH 600



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 152/309 (49%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   N ++ A  K+   +  + + + M+++     + +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +P+++T ++L+ G+C   ++ EA  +  +M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN VT+NTLI+G      +    +L + M+  G + D+ TY  ++ GLCK G    A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K ++K  +  +   Y+ +I   C  KN   A  L+  M   G RPN   +  L+  
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C    +  A+ +L +M+E+ + P+ +  S L       GK   A KL+ +M  R + P 
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 543 GFDKLRTIN 551
            F     IN
Sbjct: 344 IFTYSSLIN 352



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 2/269 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D     +  L   +    +   A   F  M      P + + N  + 
Sbjct: 330 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 387

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RV+  +  ++EM +  +  N  T N ++    + G  + A ++FK M S G  P
Sbjct: 388 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 447

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G C  G L  A+     ++K+ ++P++ T+N +I G CK GK+ +   +F
Sbjct: 448 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 507

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNV+ Y T+I+G+ + G  E   +L+ EM  +G   +  TYN LI    ++
Sbjct: 508 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 567

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           G    +A L+K++     V +AST S +I
Sbjct: 568 GDKAASAELIKEMRSCGFVGDASTISMVI 596



 Score = 46.6 bits (109), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 35/211 (16%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A  +F EM  +   P++V +N L++   ++   ++  SL E M    I  D+ +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI                                      C R     A  +   M++ 
Sbjct: 104 ILI-----------------------------------NCFCRRSQLPLALAVLGKMMKL 128

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P+      L++ +C  +    A  ++ +M      P+++  + L  GL    K   A
Sbjct: 129 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + L  +M  RG  P  F     +N   + G+
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNGLCKRGD 219


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 207/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T++ V+H L K R    +E+ LR +++     LP+   +++++Y
Sbjct: 242 FKEMVQRGIPPDLV--TYNSVVHALCKARAMDKAEAFLRQMVNKRV--LPNNWTYNNLIY 297

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR +  LP + + +  + SL    ++
Sbjct: 298 GY-----------------SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++ N++++ +   G +    ++F  M   G  P   T+N L
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 400

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   YN LI G+   G+      L  E++ NG+ +DI+ ++++I  LCK G+   A  
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P+A  YS L+ G C+    E+A +++ +M+ +G  PN  ++  L++ +
Sbjct: 521 IF-DLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 579

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML++ + P +I+ S +  GL   G+   A   F +M   G+
Sbjct: 580 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGI 635



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 165/357 (46%), Gaps = 2/357 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + + N  +        V+ 
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 237

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T N V+HA CK   +++A    + M +   +P+  TYN LI 
Sbjct: 238 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 297

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M ++ I P+V+T + L+   CK GK+ EA  +F  M     +P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +YN ++NGY   G       L++ ML +GI  D  T+N LI      G   KA  + 
Sbjct: 358 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 417

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 477

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
               +A E++ E++   M  D +  S + + L   G+   A  +F      GL P  
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDA 534



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 51/435 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++SI+L  L    K   ++ +LR + +  +                +C  + + ++ +  
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGA----------------VCSPNVVAYNTVID 227

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +        A D F +M   G  P + + N  + +L  +  +D A  F ++M   R+ P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +T N +++ +   G  + AV VFK M     +P V T + L+   C  G +  A    
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G  P+V ++N ++ G+  KG L +   +F  M    ++P+  T+N LI  Y   
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +    ++ EM  +G+K D++TY  +I  LC+ GK   A      +    + P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 442 SALITGQCVRKNSERAFQL---------------YKSMIRSGCR---------------- 470
           + LI G C   +  +A +L               + S+I + C+                
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 471 ----PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
               P+  ++ MLM  +C     ++A  V   M+   + P+ ++   L +G    G+ + 
Sbjct: 528 VGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDE 587

Query: 527 AMKLFRKMEIRGLLP 541
            + LFR+M  RG+ P
Sbjct: 588 GLSLFREMLQRGIKP 602



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 169/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+  + +M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+ Y  N ++  FC  G + +A E+   + + G    +  ++++I+  C  G + 
Sbjct: 457 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    +L    G+ P+ + ++ L+ G+C  GK+ +A R+F  M +  + PNVV Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLV 576

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++G  + G SL+ EML+ GIK   + Y+ +I GL + G+T  A     ++ ++ + 
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIA 636

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ ++ G    +  + A  L+K +     + N      ++    Q    + A ++
Sbjct: 637 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 696

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    + P  +  S + + L   G  E A  +F  M+  G  P
Sbjct: 697 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/304 (24%), Positives = 151/304 (49%), Gaps = 3/304 (0%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVT 299
           + R ++AL F+ ++ R  +  N+   N ++  FC+    + A+++       +G +P V 
Sbjct: 124 AHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVF 183

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +Y+ L+   C++G    A     +M + G    PNV+ +NT+I GF K+G +++A  +F 
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    + P++VTYN++++   +    +   +   +M+   +  +  TYN LI G    G
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           + K+A  + K++ ++S++P+  T S L+   C     + A  ++ +M   G  P+   + 
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           ++++ +          ++   ML   +APD    + L     +CG  + AM +F +M   
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423

Query: 538 GLLP 541
           G+ P
Sbjct: 424 GVKP 427



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ N+I  N L+ GFC+  +  EA + 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     +++ YN +I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TY++++   C  +  ++A    + M+     PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM    + PD + LS L   L   GK + A  +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 349 TMAMKGQNPDVF 360



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 3/241 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+ +L   Y    K   A   F  M   G  P +      ++      R+D  L  ++E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 594

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG-HCNKG 312
           M +  I P+    ++++    + G    A   F  M   G    + TYN ++ G   N+ 
Sbjct: 595 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRC 654

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
                  FK L   N ++ N+IT NT+I G  +  ++ EA  +F+ +  + + P+VVTY+
Sbjct: 655 FDEAIFLFKELRAMN-VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 713

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDK 431
            +I    + G  E    ++  M   G + +    N ++  L K+ +  +A AYL K  ++
Sbjct: 714 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 773

Query: 432 N 432
           N
Sbjct: 774 N 774



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 353 NRIFSEMKATNV-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           NR  S  +   V SP   TY  L++   +    E+  + + ++LR G++V+I+  N L+ 
Sbjct: 95  NRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 154

Query: 412 GLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-- 468
           G C+  +T +A   L+    +   VP+  +YS L+   C +  S +A  L + M   G  
Sbjct: 155 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 214

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN   +  ++  F +  D ++A ++  EM+++ + PD +  + +   L      + A 
Sbjct: 215 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 274

Query: 529 KLFRKMEIRGLLPKGF 544
              R+M  + +LP  +
Sbjct: 275 AFLRQMVNKRVLPNNW 290



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M + G    I + N  L  L  +   D A+  +KE+R   +  N+ TLN ++    +
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              +E A ++F ++     +PSV TY+ +I+    +GL+  A    + M+  G +PN   
Sbjct: 687 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 746

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            N ++    KK ++  A    S++   N S   +T   L++ +   G
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKG 793



 Score = 43.1 bits (100), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 72/159 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++ +     + F  A   F ++R       I + N  +  +  + RV+ A   +  + 
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 701

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+R+ P+V T ++++    K G++E A ++F +M++ G  P+    N ++     K  + 
Sbjct: 702 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 761

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            A  + + +++       +T   L+  F  KG   E  R
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIR 800


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 174/346 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L  + A  K +        QM  +G  P + + N  ++S     RV  A     ++ 
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 118

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  G  S
Sbjct: 119 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 178

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++    ME+   QP+V+ + ++I   CK  ++ EA  +FS+M    +SP++ TY +L+
Sbjct: 179 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +    +   +   +L  +M+ + I  D++ ++ ++  LCKEGK  +A  +V  + +  + 
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+ G C++   + A +++  M+R G  P+   +  L++ +C+    D+A  +
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  K   PD+   + L  GL H G+ + A+ LF +M  RG +P
Sbjct: 359 FEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP 404



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 170/351 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +++  +  +    ++   A + F QM   G  P I +    + +L +        
Sbjct: 192 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 251

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  ++I P+V   + V+ A CK G +  A E+   M   G  P V TY TL+ GH
Sbjct: 252 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 311

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  ++M + G  P+VI++ TLI G+CK  K+ +A  +F EM      P+ 
Sbjct: 312 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 371

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYNTL++G   VG  +   +L+ EM+  G   D++TY+ L+  LCK    ++A  L+K 
Sbjct: 372 KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKA 431

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ ++L P+   Y+ +I G C     E A  L+ ++   G  P+   + +++   C+   
Sbjct: 432 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 491

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            + A ++ +EM     +PD    + +  G     +   A++L  +M  RG 
Sbjct: 492 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 542



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 155/310 (50%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + SL    +V  A   + +M    ISP+++T   ++HA C L   +    +   M +  
Sbjct: 202 IIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK 261

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P V  ++T++   C +G ++ A +  ++M + G++P+V+T+ TL+ G C + ++ EA 
Sbjct: 262 ILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAV 321

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++F  M     +P+V++Y TLINGY ++   +    L+EEM R     D  TYN L+ GL
Sbjct: 322 KVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGL 381

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G+ + A  L  ++     +P+  TYS L+   C   + E A  L K++  S   P+ 
Sbjct: 382 CHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDI 441

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
            ++ +++   C+  + + A ++   +  K + P     + +  GL   G    A KLF +
Sbjct: 442 QVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFME 501

Query: 534 MEIRGLLPKG 543
           M+     P G
Sbjct: 502 MDGNDCSPDG 511



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 166/346 (47%), Gaps = 6/346 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++++ T    QM +   LP +   +  + +L    +V  A      M +  + P+V T  
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 305

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M   C    ++ AV+VF  M   GF P V +Y TLI+G+C    +  AM     M + 
Sbjct: 306 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 365

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
              P+  T+NTL+ G C  G+L +A  +F EM A    P++VTY+ L++   +  + E  
Sbjct: 366 EWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEA 425

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +L + +  + +  DI  YN +I G+C+ G+ + A  L  +L    L P+  TY+ +I G
Sbjct: 426 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 485

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C R     A +L+  M  + C P+   +  +   F QN +  RA ++L EML +  + D
Sbjct: 486 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 545

Query: 508 SIILSELYSGLHHCGKDE----LAMKLFRKMEIRG--LLPKGFDKL 547
               + L   L   G D+    L + +  + + R    +P+GFD L
Sbjct: 546 VSTTTLLVEMLSDDGLDQSSCFLMLSVLSEDDRRYFIFIPEGFDLL 591



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 19/358 (5%)

Query: 76  GQDLDFVNIAYSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV 130
           GQ +      Y+ L+H+     +WK +T L   +       V  K+  D V+   F T V
Sbjct: 224 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM-------VNSKILPDVVI---FSTVV 273

Query: 131 QTHKPSSLTLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
                     E H IV  ++ +  +    +  +++ G       D   K+FD ++     
Sbjct: 274 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 333

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            D   + +  L   Y    K   A   F +M    ++P  ++ N  +  L    R+  A+
Sbjct: 334 PDV--ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM      P++ T ++++ + CK   +E A+ + K +E+    P +  YN +I G 
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 451

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A    + +   G+ P+V T+N +I G CK+G L+EAN++F EM   + SP+ 
Sbjct: 452 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 511

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            TYNT+  G+ Q   +     L EEML  G   D+ T   L+  L  +G  + + +L+
Sbjct: 512 CTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFLM 569


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 215/439 (48%), Gaps = 11/439 (2%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           +L P  ++ V+ +++ +   +L FF W +        +++   + H+L ++R F  +  +
Sbjct: 52  NLQPAHLEPVVFQLRSNPTSALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRV 111

Query: 163 L-RGILDSDSFDLPSKLFDSILYSYRMCDSSP-LVFDLLFKTYAHRKKFRNATDTFCQMR 220
             R +    + ++  +   S    +R   S+P  V+  L   Y        A DTF  M 
Sbjct: 112 FDRMVGQFGNLEVLGEFHGS----FRNYGSNPSTVYSFLLHCYCRNGMVDRAVDTFAWMS 167

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G      + ++ L  L+DS+R+D+ L  Y+EM +      VY    V ++F K G +E
Sbjct: 168 KMGVSISHYAASEMLDLLIDSDRIDVILENYEEMCKGL---GVYEF--VFNSFLKRGEVE 222

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           + +   + +   G +P +   N ++ G C    + +A  F ++M ++G  PN++TF+TLI
Sbjct: 223 KGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLI 282

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             +CK+ +L EA  +++ M    + P++V Y+ LING  + G  E G SL+   L  G+K
Sbjct: 283 NVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVK 342

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D++ +++++    + G   KA  +   + K  + PN  TYS LI G C       A  +
Sbjct: 343 MDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGV 402

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +++ G  P+   +  L+  FC++E+      +   ML K   PD ++ S L +GL  
Sbjct: 403 FGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSR 462

Query: 521 CGKDELAMKLFRKMEIRGL 539
            G  + A++ F +   RGL
Sbjct: 463 QGMMDEALRFFFQAVKRGL 481



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 151/283 (53%), Gaps = 8/283 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS--ERVDIALGF- 250
           + + +L K  A + +   A   F Q+   GF P     +    +L+D   ++ D A G  
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPD----HIIYCTLIDGFCKKRDPATGLQ 576

Query: 251 -YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +K M+ N I P++   N++++ F + G +E  +E+ + +   G  P + TYNT+I G+C
Sbjct: 577 IFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYC 636

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +  + S A+K   +++    QPN ITF  LI  +CK G++ +A  IFS M      PN++
Sbjct: 637 SLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNIL 696

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+ LI+GY +  N+E    LYE+ML + +  +I++Y+ LI GLCK+G  ++A+   +  
Sbjct: 697 TYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCA 756

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
               L+P+   Y  LI G C       A  LY  M+ +G  P+
Sbjct: 757 IGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 191/401 (47%), Gaps = 14/401 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYR-MCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  +L  ++DSD  D+       IL +Y  MC     V++ +F ++  R +     +  
Sbjct: 177 AASEMLDLLIDSDRIDV-------ILENYEEMCKGLG-VYEFVFNSFLKRGEVEKGLNFH 228

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             + + G +P I  CNK L  L    ++ +A  F+  M R+  SPN+ T + +++ +CK 
Sbjct: 229 RALVERGLVPKIVDCNKILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKE 288

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++ A  ++  M   G +P +  Y+ LI+G    G L       ++    G++ +V+ F
Sbjct: 289 LRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIF 348

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++++  + + G L +A  +++ M    +SPNVVTY+ LING  + G       ++ ++L+
Sbjct: 349 SSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILK 408

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G++  +LTY++LI G CK    +    L   + +   VP+    S LI G   +   + 
Sbjct: 409 QGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDE 468

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A + +   ++ G   N ++F  L+    + +      ++ + M    + PD +  + L  
Sbjct: 469 ALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVK 528

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           GL   G+ + A+ LF +     LL KGF     I C   +G
Sbjct: 529 GLAEQGRLDEALALFFQ-----LLKKGFSPDHIIYCTLIDG 564



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 163/352 (46%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S L +  L   +   +  R+    +  M   G +P +  C+  ++ L     +D AL 
Sbjct: 412 EPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALR 471

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F+ +  +  ++ N Y  N ++    +L      ++++  M     IP V TY  L+ G  
Sbjct: 472 FFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLA 531

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A+     + K G  P+ I + TLI GFCKK       +IF  M++  + P++ 
Sbjct: 532 EQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDIC 591

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            YN LIN + + G  E    L  E+++ G++ DI+TYN +I G C      KA  L + L
Sbjct: 592 IYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVL 651

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 PNA T++ LI   C     + A  ++ SM+  G  PN   +  L+  + + E+ 
Sbjct: 652 KCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENT 711

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + A E+  +ML   ++P+ +  S L  GL   G  E A   F+    R LLP
Sbjct: 712 ESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLP 763



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 161/355 (45%), Gaps = 17/355 (4%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           F  A      + +Y F  +I+ C + L    D  ++ I +G YK      + P+V T  +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFR-LKRTRDGLKMYILMGMYK------VIPDVVTYTV 525

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++    + G ++ A+ +F  +   GF P    Y TLI G C K   +  ++   LM+ NG
Sbjct: 526 LVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNG 585

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           I P++  +N LI  F ++G +     +  E+    + P++VTYNT+I GY  +       
Sbjct: 586 IFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAI 645

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L+E +     + + +T+  LI   CK+G+   A  +   + +    PN  TYS LI G 
Sbjct: 646 KLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGY 705

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
              +N+E AF+LY+ M+     PN   + +L+   C+    + A+      + + + PD 
Sbjct: 706 FKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDV 765

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK----------GFDKLRTINCA 553
           I    L  G    G+   AM L+  M + G++P           GF   +  NC 
Sbjct: 766 IAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQAKNCV 820



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/389 (23%), Positives = 178/389 (45%), Gaps = 6/389 (1%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNA 212
           K      IL+G+   +   + S  FD ++ S      SP  + F  L   Y    +   A
Sbjct: 239 KIVDCNKILKGLCMGNQIGVASDFFDMMVRS----GPSPNLVTFSTLINVYCKELRLDEA 294

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              +  M + G +P +   +  ++ L  + +++     +       +  +V   + +M A
Sbjct: 295 FSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDA 354

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           + ++G + +A+EV+  M   G  P+V TY+ LI+G C  G +  A      + K G++P+
Sbjct: 355 YVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPS 414

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T+++LI GFCK   L +   ++  M      P+VV  + LING  + G  +     + 
Sbjct: 415 VLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFF 474

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           + ++ G+ ++   +NALI G  +  +T+    +   +    ++P+  TY+ L+ G   + 
Sbjct: 475 QAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQG 534

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             + A  L+  +++ G  P+  I+  L+  FC+  D     ++   M    + PD  I +
Sbjct: 535 RLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYN 594

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L +     G  E  ++L R++   GL P
Sbjct: 595 VLINMFFREGCVENVLELLREIIKYGLEP 623



 Score =  128 bits (322), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 142/289 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  Y  M +  ISPNV T +++++  C+ G +  A  VF  +   G  PSV TY++LI 
Sbjct: 364 AIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    L        +M + G  P+V+  + LI G  ++G + EA R F +     ++ 
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N   +N LI+G  ++  +  G  +Y  M    +  D++TY  L+ GL ++G+  +A  L 
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALF 543

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L K    P+   Y  LI G C +++     Q++K M  +G  P+  I+ +L++ F + 
Sbjct: 544 FQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFRE 603

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
              +   E+L E+++  + PD +  + +  G         A+KLF  ++
Sbjct: 604 GCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 170/348 (48%), Gaps = 36/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PIIE  NK L SL   ++   A+   K+M    I  N  TLN++++ FC LG +  +  V
Sbjct: 9   PIIEF-NKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------- 330
              +  +G+ P   T NTL+ G C KG +  ++ F + +   G Q               
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 331 --------------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                               PNV+ +NT+I G CK   ++EA  ++SEM A  + P+ +T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI G+  +G      SL +EM+   I   +  YN LI  LCKEG  K+A  L+  + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  + P   TYS L+ G C+    + A Q++ +M++ G  PN + + ++++  C+ +  D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A  +L EML K M PD++  + L  GL   G+   A+ L  +M  RG
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRG 355



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 156/332 (46%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A      + D    P +   N  +  L   + V+ A   Y EM    I P+  T   +
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ FC LG +  A  +   M      P V  YN LI+  C +G +  A     +M K GI
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P V+T++TL+ G+C  G++  A +IF  M    V+PNV +YN +ING  +    +   +
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L  EML   +  D +TYN+LI GLCK G+   A  L+ ++       +  TY++L+   C
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALC 371

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +N ++A  L+  M   G +P  + +  L+   C+      A E+   +L K    D  
Sbjct: 372 KNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW 431

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + + SGL   G  + A+ +  KME  G +P
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIP 463



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 175/367 (47%), Gaps = 1/367 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +       K    A D + +M   G  P   +    +       ++  A     E
Sbjct: 151 VMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDE 210

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+P VY  N++++A CK G ++ A  +   M   G  P V TY+TL+ G+C  G 
Sbjct: 211 MILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGE 270

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M + G+ PNV ++N +I G CK  ++ EA  +  EM   N+ P+ VTYN+
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G      +L  EM   G   D++TY +L+  LCK     KA  L   + +  
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P   TY+ALI G C     + A +L++ ++  GC  +   + +++S  C+   FD A 
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            +  +M +    P+++    +   L    +++ A KL  +M  +GLL   F K+  +   
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLVLDF-KVADVFVQ 509

Query: 554 PENGEKE 560
            EN + E
Sbjct: 510 NENDKAE 516



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 175/380 (46%), Gaps = 35/380 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  ++L   + H  +   +     ++   G+ P   + N  +  L     V  +L F+ +
Sbjct: 46  VTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDK 105

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       +  +   +++  CK+G    AV++ + +E     P+V  YNT+I G C   L
Sbjct: 106 VVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKL 165

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGF------------------------------ 343
           ++ A    + M+  GI P+ IT+ TLI+GF                              
Sbjct: 166 VNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNI 225

Query: 344 -----CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                CK+G + EA  + + M    + P VVTY+TL++GY  VG  +    ++  M++ G
Sbjct: 226 LINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMG 285

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  ++ +YN +I GLCK  +  +A  L++++   ++VP+  TY++LI G C       A 
Sbjct: 286 VNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSAL 345

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   M   G   +   +  L+   C+N++ D+A  + ++M E+ + P     + L  GL
Sbjct: 346 NLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405

Query: 519 HHCGKDELAMKLFRKMEIRG 538
              G+ + A +LF+ + ++G
Sbjct: 406 CKGGRLKNAQELFQHLLVKG 425



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 150/309 (48%), Gaps = 6/309 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L          + A +    M   G  P + + +  +        V  A   +  M
Sbjct: 222 IYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAM 281

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  ++PNVY+ N++++  CK   ++ A+ + + M     +P   TYN+LI G C  G +
Sbjct: 282 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRI 341

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A+   N M   G   +V+T+ +L+   CK   L +A  +F +MK   + P + TY  L
Sbjct: 342 TSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTAL 401

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  + G  +    L++ +L  G  +D+ TY  +I GLCKEG   +A  +   ++ N  
Sbjct: 402 IDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGC 461

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM-LMSTFCQNEDFDRAA 493
           +PNA T+  +I     +  +++A +L   MI  G      + +  +   F QNE+ D+A 
Sbjct: 462 IPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL----VLDFKVADVFVQNEN-DKAE 516

Query: 494 EVLLEMLEK 502
           ++L EM+ K
Sbjct: 517 KLLHEMIAK 525



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 137/284 (48%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R +P +   N ++ +  K+     A+ + K ME  G   +  T N LI+  C+ G ++ +
Sbjct: 5   RHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFS 64

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 + K G QP+ IT NTL+ G C KG++ ++     ++ A     + V+Y TL+NG
Sbjct: 65  FSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNG 124

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             ++G +     L   +     + +++ YN +I GLCK+    +A  L  ++D   + P+
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           A TY+ LI G C+      AF L   MI     P  +I+ +L++  C+  +   A  +L 
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLA 244

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            M ++ + P  +  S L  G    G+ + A ++F  M   G+ P
Sbjct: 245 VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNP 288


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 182/358 (50%), Gaps = 8/358 (2%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  +F  A D F  M +   LP I    + L+ +   ++ D+ +   K ++   +S ++Y
Sbjct: 48  HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLY 107

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N++M+ FC+      A      +  +GF P + T+ +LI+G C    +  AM   N M
Sbjct: 108 TCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQM 167

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + GI+P+V+ + T+I   CK G +  A  +F++M+   + P+VV Y +L+NG    G  
Sbjct: 168 VEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRW 227

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                L   M++  IK D++T+NALI    KEGK   A  L  ++ + S+ PN  TY++L
Sbjct: 228 RDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSL 287

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+    + A Q++  M   GC P+   +  L++ FC+ +  + A ++  EM +K +
Sbjct: 288 INGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGL 347

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN----CAPENGE 558
             ++I  + L  G    GK  +A ++F  M  RG+ P     +RT N    C   NG+
Sbjct: 348 TGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPP----NIRTYNVLLHCLCYNGK 401



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           NA   F QM +YG  P +      ++ L +S R   A    + M + +I P+V T N ++
Sbjct: 194 NALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALI 253

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            AF K G +  A E++  M  M   P++ TY +LI+G C +G L  A +   LME  G  
Sbjct: 254 DAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCF 313

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+V+ + +LI GFCK  K+ +A +IF EM    ++ N +TY TLI G+G VG   +   +
Sbjct: 314 PDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEV 373

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK---NSLVPNASTYSALITG 447
           +  M+  G+  +I TYN L+  LC  GK  KA  + +D+ K   + + PN  TY+ L+ G
Sbjct: 374 FGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHG 433

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     E+A  ++  M +         + +++   C+      A  +   +  K + P+
Sbjct: 434 LCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPN 493

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  + + SGL   G    A  LFRKM+  G+
Sbjct: 494 VVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 9/401 (2%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R F +   ILR  L S  F+    LF  ++ S  +   S + F  L    A  KKF    
Sbjct: 34  RAFCNYREILRNGLHSLQFNEALDLFSHMVESRPL--PSIIDFTRLLNVIAKMKKFDVVI 91

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           +    ++  G    + +CN  ++    S +  +A  F  ++ +    P+++T   +++ F
Sbjct: 92  NLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGF 151

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C    IE A+ +   M  MG  P V  Y T+I   C  G +  A+   N ME  GI+P+V
Sbjct: 152 CLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDV 211

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + +L+ G C  G+  +A+ +   M    + P+V+T+N LI+ + + G       LY E
Sbjct: 212 VMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNE 271

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M++  I  +I TY +LI GLC EG+  +A  +   ++     P+   Y++LI G C  K 
Sbjct: 272 MIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 331

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E A +++  M + G   N   +  L+  F      + A EV   M+ + + P+    + 
Sbjct: 332 VEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNV 391

Query: 514 LYSGLHHCGKDELAMKLFRKM---EIRGLLPKGFDKLRTIN 551
           L   L + GK   A+ +F  M   EI G+ P     +RT N
Sbjct: 392 LLHCLCYNGKVNKALMIFEDMQKREIDGVPP----NIRTYN 428



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 168/383 (43%), Gaps = 38/383 (9%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +LL   +    +   A+    ++   GF P I +    ++      R++ A+    +M  
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P+V     ++ + CK G ++ A+ +F  ME+ G  P V  Y +L++G CN G    
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A      M K  I+P+VITFN LI  F K+GKL +A  +++EM   +++PN+ TY +LIN
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G    G  +    ++  M   G   D++ Y +LI G CK  K + A  +  ++ +  L  
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349

Query: 437 NASTYSALITG-----------------------------------QCVRKNSERAFQLY 461
           N  TY+ LI G                                    C      +A  ++
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF 409

Query: 462 KSMIR---SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + M +    G  PN   + +L+   C N   ++A  V  +M ++ M    I  + +  G+
Sbjct: 410 EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGM 469

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              GK + A+ LF  +  +G+ P
Sbjct: 470 CKAGKVKDALNLFCSLPSKGVKP 492



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
            + + +  L + +    K   A + F  M   G  P I + N  L  L  + +V+ AL  
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMI 408

Query: 251 YKEMRRNRIS---PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +++M++  I    PN+ T N+++H  C  G +E+A+ VF +M+       + TY  +I G
Sbjct: 409 FEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQG 468

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            C  G +  A+     +   G++PNV+T+ T+I G  ++G + EA+ +F +MK   VS
Sbjct: 469 MCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 177/351 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  +++  +     + K   +A + F +M + G  P + + N  +  L +  R   A  
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PNV T + ++ AF K G +  A +++  M      P + TY++LI+G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A     LM      PNV+T+NTLI GFCK  ++ E   +F EM    +  N V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI G  Q G+ +M   ++++M+ +G+  DI+TY+ L+ GLCK GK +KA  + + L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ + P+  TY+ +I G C     E  + L+ S+   G +PN  I+  ++S FC+    
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + A  +  EM E    P+S   + L       G    + +L ++M   G +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 171/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+     +R+  A+    +M 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N ++H          AV +   M + G  P + TY T+++G C +G + 
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+     MEK  I+ +V+ + T+I   C    +++A  +F+EM    + PNVVTYN+LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 G     + L  +M+   I  +++T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+LI G C+    + A  +++ MI   C PN   +  L+  FC+ +  +   E+
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM ++ +  +++  + L  GL   G  ++A K+F+KM   G+ P
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 171/364 (46%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+   A     QM    + P   + N  +  L    +   A+     M    
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+++T   V++  CK G I+ A+ + K ME       V  Y T+I   CN   ++ A+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M+  GI+PNV+T+N+LI   C  G+  +A+R+ S+M    ++PNVVT++ LI+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       LY+EM++  I  DI TY++LI G C   +  +A ++ + +      PN 
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M + G   N   +  L+    Q  D D A ++  +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + PD I  S L  GL   GK E A+ +F  ++   + P  +     I    + G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 559 KESG 562
            E G
Sbjct: 516 VEDG 519



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 44/404 (10%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F L    F +  Y YR   S  ++ DL         K  +A D F +M     LP I   
Sbjct: 33  FSLRGVYFSAASYDYREKLSRNVLLDL---------KLDDAVDLFGEMVQSRPLPSIVEF 83

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK LS++    + D+ +   + M+  RIS ++Y+ N++++ FC+   +  A+ V   M  
Sbjct: 84  NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G+ P + T ++L++G+C+   +S A+   + M     QPN +TFNTLI G     K  E
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS---------------------- 389
           A  +   M A    P++ TY T++NG  + G+ ++  S                      
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263

Query: 390 -------------LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
                        L+ EM   GI+ +++TYN+LI  LC  G+   A+ L+ D+ +  + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  T+SALI           A +LY  MI+    P+   +  L++ FC ++  D A  + 
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             M+ K   P+ +  + L  G     + E  M+LFR+M  RGL+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/299 (30%), Positives = 160/299 (53%), Gaps = 2/299 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D+AL   K+M + +I  +V     ++ A C    +  A+ +F  M++ G  P+V TYN+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   CN G  S A +  + M +  I PNV+TF+ LI  F K+GKL EA +++ EM   +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++ TY++LING+      +    ++E M+      +++TYN LI G CK  + ++  
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L +++ +  LV N  TY+ LI G     + + A +++K M+  G  P+   + +L+   
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475

Query: 484 CQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+    ++A  V+ E L+K  M PD    + +  G+   GK E    LF  + ++G+ P
Sbjct: 476 CKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 162/330 (49%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +L + + V+ AL  + EM    I PNV T N ++   C  G    A  +  +M    
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V T++ LI     +G L  A K  + M K  I P++ T+++LI GFC   +L EA 
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F  M + +  PNVVTYNTLI G+ +    E G  L+ EM + G+  + +TYN LI GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            + G    A  + K +  + + P+  TYS L+ G C     E+A  +++ + +S   P+ 
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           + + +++   C+    +   ++   +  K + P+ II + + SG    G  E A  LFR+
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560

Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           M+  G LP        I     +G+K +  
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASA 590



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 163/326 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L +   +  ++ +A+     M +    P + + +  + + +   ++  A   Y E
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+++T + +++ FC    ++ A  +F+ M S    P+V TYNTLI G C    
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +   M+    M + G+  N +T+NTLI G  + G    A +IF +M +  V P+++TY+ 
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  + G  E    ++E + ++ ++ DI TYN +I G+CK GK +    L   L    
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN   Y+ +I+G C +   E A  L++ M   G  PN   +  L+    ++ D   +A
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLH 519
           E++ EM       D+  +S + + LH
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINMLH 616



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 152/309 (49%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   N ++ A  K+   +  + + + M+++     + +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +P+++T ++L+ G+C   ++ EA  +  +M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN VT+NTLI+G      +    +L + M+  G + D+ TY  ++ GLCK G    A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K ++K  +  +   Y+ +I   C  KN   A  L+  M   G RPN   +  L+  
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C    +  A+ +L +M+E+ + P+ +  S L       GK   A KL+ +M  R + P 
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 543 GFDKLRTIN 551
            F     IN
Sbjct: 360 IFTYSSLIN 368



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 2/269 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D     +  L   +    +   A   F  M      P + + N  + 
Sbjct: 346 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RV+  +  ++EM +  +  N  T N ++    + G  + A ++FK M S G  P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G C  G L  A+     ++K+ ++P++ T+N +I G CK GK+ +   +F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNV+ Y T+I+G+ + G  E   +L+ EM  +G   +  TYN LI    ++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           G    +A L+K++     V +AST S +I
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVI 612



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 35/211 (16%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A  +F EM  +   P++V +N L++   ++   ++  SL E M    I  D+ +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI                                      C R     A  +   M++ 
Sbjct: 120 ILI-----------------------------------NCFCRRSQLPLALAVLGKMMKL 144

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P+      L++ +C  +    A  ++ +M      P+++  + L  GL    K   A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204

Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + L  +M  RG  P  F     +N   + G+
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/304 (32%), Positives = 162/304 (53%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + EM    I+P+ YT N+++ A CK G I+ A  V   M   G  P+V TYNTL+ 
Sbjct: 247 AFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMD 306

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    +  A    +++ +  + PN  ++N +I GFCK   + EA  +F EM    ++P
Sbjct: 307 GYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAP 366

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYN+LI+G  + G       L +EM  N I  DI+TYN+LI   CK     KA  LV
Sbjct: 367 HKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALV 426

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K + ++ + PN  TY+ LI G C     + A  +++ ++  G   N   + ++++  C+ 
Sbjct: 427 KKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKE 486

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
             FD A  +L +M +  + PD++    +   L H  ++E A KL R+M I+G++   F+ 
Sbjct: 487 GLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVVVYAFEI 546

Query: 547 LRTI 550
            RT+
Sbjct: 547 RRTL 550



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 165/346 (47%), Gaps = 22/346 (6%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSE-RVDIALGFYKEMRRNRISPNVYTLNMV 269
           NA  +F +MR     P I   NK L+ L+ ++      L    +M    + P+++TL+++
Sbjct: 49  NAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSIL 108

Query: 270 MHAFCKLGIIERAVEVFKNMESM---------------------GFIPSVTTYNTLISGH 308
           ++ +C LG +  A  VF  +  M                     GF  +  TY  LI+G 
Sbjct: 109 INCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGL 168

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G    A++    +E   +  NV+ ++T+I G CK   + +A  ++SEM    + P V
Sbjct: 169 CKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTV 228

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+++LI G+  VG  +    L+ EM+   I  D  T+N L+  LCKEGK K+A  ++  
Sbjct: 229 VTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAV 288

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  + P   TY+ L+ G C+     +A  +   + R    PN   + ++++ FC+ + 
Sbjct: 289 MMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKM 348

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D A  +  EM  + +AP  +  + L  GL   G+   A +L  +M
Sbjct: 349 VDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEM 394



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 167/348 (47%), Gaps = 18/348 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC--NKFLSSLLDSERVDIALGFYKE 253
             +L   Y H  +   A   F ++   G       C   K   +LL  + V +ALGF+  
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAKILKMGL------CLNGKVNEALLFHDHV-LALGFH-- 155

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                   N  T  ++++  CK+G    A++V + +E      +V  Y+T+I G C   L
Sbjct: 156 -------LNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKL 208

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    + M    I P V+TF++LI+GFC  GK  +A R+F+EM   N++P+  T+N 
Sbjct: 209 VTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNI 268

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++   + G  +   ++   M++ G++  ++TYN L+ G C   +  KA +++  + +  
Sbjct: 269 LVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMR 328

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN+ +Y+ +I G C  K  + A  L+  M   G  P+K  +  L+   C+      A 
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E++ EM   C+  D +  + L          + A+ L +K++  G+ P
Sbjct: 389 ELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQP 436



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/323 (24%), Positives = 135/323 (41%), Gaps = 37/323 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G      F    +LF+ ++   +  +     F++L        K + A +    M 
Sbjct: 233 SLIYGFCIVGKFKDAFRLFNEMVM--KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + N  +        V  A      + R R++PN  + N++++ FCK+ +++
Sbjct: 291 KEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVD 350

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN------------- 327
            A+ +F  M   G  P   TYN+LI G C  G +  A +  + M  N             
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLI 410

Query: 328 ----------------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                                 GIQPN+ T+N LI G CK G+L  A  +F ++     +
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN 470

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            N  TYN +ING  + G  +    L  +M  NGI  D +TY  +I  L  + + +KA  L
Sbjct: 471 VNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKL 530

Query: 426 VKDLDKNSLVPNASTYSALITGQ 448
           ++++    +V  A      + G+
Sbjct: 531 LREMVIKGVVVYAFEIRRTLVGR 553


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 4/367 (1%)

Query: 177 KLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           KL DS+   + M    PL     F  L    +  KK+      + QM+  G    + +CN
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             L+      ++ +AL F  +M +    P++ T   +++ FC+   +  A+ +F  M  M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+ P+V  YNT+I G C    +  A+   N MEK+GI P+V+T+N+LI G C  G+  +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            R+ S M    + P+V T+N LI+   + G        YEEM+R  +  DI+TY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC   +  +A  +   +      P+  TYS LI G C  K  E   +L+  M + G   N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +L+  +C+    + A E+   M+   + P+ I  + L  GL   GK E A+ +  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 533 KMEIRGL 539
            M+  G+
Sbjct: 421 DMQKNGM 427



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 176/334 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  ++ D F  M     LP I   ++ LS++   ++ D+ +  +++M+   I  N+ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+   +  A+     M  +G  PS+ T+ +L++G C    +  A+   + M   
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G +PNV+ +NT+I G CK  ++  A  + + M+   + P+VVTYN+LI+G    G     
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +   M +  I  D+ T+NALI    KEG+  +A    +++ + SL P+  TYS LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C+    + A +++  M+  GC P+   + +L++ +C+++  +   ++  EM ++ +  +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  + L  G    GK  +A ++FR+M   G+ P
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 164/345 (47%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           ++L   +    +   A     +M   G  P I +    L+     +RV  AL  + +M  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               PNV   N ++   CK   ++ A+++   ME  G  P V TYN+LISG C+ G  S 
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +  + M K  I P+V TFN LI    K+G++ EA   + EM   ++ P++VTY+ LI 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G       +    ++  M+  G   D++TY+ LI G CK  K +    L  ++ +  +V 
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY+ LI G C       A ++++ M+  G  PN   + +L+   C N   ++A  +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +M +  M  D +  + +  G+   G+   A  ++  +  +GL+P
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 167/352 (47%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L   +    +  +A   F QM   G+ P +   N  +  L  S++VD AL 
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M ++ I P+V T N ++   C  G    A  +   M      P V T+N LI    
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +S A +F   M +  + P+++T++ LI+G C   +L EA  +F  M +    P+VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+ LINGY +    E G  L+ EM + G+  + +TY  LI G C+ GK   A  + + +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               + PN  TY+ L+ G C     E+A  +   M ++G   +   + +++   C+  + 
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A ++   +  + + PD    + +  GL+  G    A  LFRKM+  G+LP
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 137/266 (51%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +AT     M      P + + N  + + +   RV  A  FY+EM R  + P++ T +
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++  C    ++ A E+F  M S G  P V TY+ LI+G+C    +   MK    M + 
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+  LI G+C+ GKL+ A  IF  M    V PN++TYN L++G    G  E  
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +  +M +NG+  DI+TYN +I G+CK G+   A  +   L+   L+P+  TY+ ++ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNK 473
              +     A  L++ M   G  PN+
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPNE 501



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 121/242 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L        +   A + + +M      P I + +  +  L    R+D A   +  M 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+V T +++++ +CK   +E  +++F  M   G + +  TY  LI G+C  G L+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +A +    M   G+ PN+IT+N L+ G C  GK+ +A  I ++M+   +  ++VTYN +I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G  + G       +Y  +   G+  DI TY  ++LGL K+G  ++A  L + + ++ ++
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498

Query: 436 PN 437
           PN
Sbjct: 499 PN 500



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 106/213 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  D   + + LL        +   A + F  M   G  P + + +  ++    S++V+ 
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            +  + EM +  +  N  T  +++  +C+ G +  A E+F+ M   G  P++ TYN L+ 
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C+ G +  A+     M+KNG+  +++T+N +I G CK G++ +A  I+  +    + P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++ TY T++ G  + G      +L+ +M  +GI
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 86/179 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + + +L   Y   KK  +    FC+M   G +    +    +     + ++++A 
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++ M    + PN+ T N+++H  C  G IE+A+ +  +M+  G    + TYN +I G 
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G ++ A      +   G+ P++ T+ T++ G  KKG   EA+ +F +MK   + PN
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 91/197 (46%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL ++  +F  M      P++  ++ L++   ++   ++   L+E+M   GI  ++ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+   C+  +   A   +  + K    P+  T+ +L+ G C       A  ++  M+  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +PN  I+  ++   C+++  D A ++L  M +  + PD +  + L SGL   G+   A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240

Query: 528 MKLFRKMEIRGLLPKGF 544
            ++   M  R + P  F
Sbjct: 241 TRMVSCMTKREIYPDVF 257


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 173/347 (49%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   GF P + + N  L  L   +R+  AL  + +M 
Sbjct: 119 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC 178

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    PNV T   +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 179 K----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I PNV+ +NT+I G  K G+  +A+ +F EM+   + P++VTYN +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING+   G       L +EML   I  D++T++ALI    KEGK  +A  L  ++   S+
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P+  TYS++I G C +   + A  ++      GC P+   F  L++ +C+ +  D   +
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIK 414

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM E  +  ++I  + L  G    G    A  L ++M   G+ P
Sbjct: 415 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 181/379 (47%), Gaps = 24/379 (6%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + D L+K   H     +A + F +M++    P I + N  ++    S R   A    +EM
Sbjct: 259 IIDGLWKDGRHS----DAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEM 314

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              +I+P+V T + +++AF K G    A E++  M     IPS  TY+++I G C +  L
Sbjct: 315 LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRL 374

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A     L    G  P++ITFNTLI G+C+  ++ +  ++  EM    +  N +TY TL
Sbjct: 375 DAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 434

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK--- 431
           I+G+ QVG+      L +EM+ +G+  +++T N L+ GLC  GK K A  + K + K   
Sbjct: 435 IHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 432 --------NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                   N + P+  TY+ LI G         A +LY+ M   G  P+   +  ++   
Sbjct: 495 DIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGL 554

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK- 542
           C+    D A ++   M  K  +PD +  + L +G    G  +  ++LF +M  RG++   
Sbjct: 555 CKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADA 614

Query: 543 --------GFDKLRTINCA 553
                   GF K+  I+ A
Sbjct: 615 ITYITLIYGFRKVDNIDGA 633



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 164/354 (46%), Gaps = 11/354 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    KF  A + + +M     +P   + +  +       R+D A   +  
Sbjct: 324 VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYL 383

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                 SP++ T N ++  +C+   ++  +++   M   G + +  TY TLI G C  G 
Sbjct: 384 TPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 443

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT----------- 362
           L+ A      M  +G+ PNV+T NTL+ G C  GKL +A  +F  M+ +           
Sbjct: 444 LNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFN 503

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+V TYN LI G    G       LYEEM   GI  D +TY+++I GLCK+ +  +A
Sbjct: 504 GVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   +   S  P+  T++ LITG C     +   +L+  M + G   +   +  L+  
Sbjct: 564 TQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           F + ++ D A ++  EM+   + PD+I +  + +GL    + E A+ +   +++
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQM 677



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 169/337 (50%), Gaps = 7/337 (2%)

Query: 207 KKFRNATDTFCQMRDYGFLP-IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
           K   +A D F  M     LP +I+ C K +  ++   R D+ +  +K+M   R+  N Y+
Sbjct: 60  KGLDDAIDLFGYMVRSRPLPSVIDFC-KLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYS 118

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
             ++M  FC    +  A+  F  +  +GF P+V T+NTL+ G C +  +S A+   + M 
Sbjct: 119 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMC 178

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           K    PNV+TF TL+ G C++G++ EA  +   M    + PN +TY T+++G  ++G++ 
Sbjct: 179 K----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 234

Query: 386 MGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
              +L  +M   + I  +++ YN +I GL K+G+   A  L  ++ +  + P+  TY+ +
Sbjct: 235 SALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCM 294

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+      A QL + M+     P+   F  L++ F +   F  A E+  EML + +
Sbjct: 295 INGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSI 354

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P ++  S +  G     + + A  +F     +G  P
Sbjct: 355 IPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP 391



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 158/334 (47%), Gaps = 13/334 (3%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           +L+D +L   R    S + +  +   +  + +   A   F      G  P I + N  ++
Sbjct: 344 ELYDEMLP--RSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIA 401

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RVD  +    EM    +  N  T   ++H FC++G +  A ++ + M S G  P
Sbjct: 402 GYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCP 461

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCK 345
           +V T NTL+ G C+ G L  A++    M+K           NG++P+V T+N LI G   
Sbjct: 462 NVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLIN 521

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +GK  EA  ++ EM    + P+ +TY+++I+G  +    +    +++ M       D++T
Sbjct: 522 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVT 581

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N LI G CK G       L  ++ +  +V +A TY  LI G     N + A  +++ MI
Sbjct: 582 FNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMI 641

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            SG  P+      +++     E+ +RA  +L ++
Sbjct: 642 SSGVYPDTITIRNMLTGLWSKEELERAVAMLEDL 675



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 147/315 (46%), Gaps = 13/315 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +  D    +F   L   + C    + F+ L   Y   K+  +      +M 
Sbjct: 363 SMIDGFCKQNRLDAAEHMF--YLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G +    +    +        ++ A    +EM  + + PNV T N ++   C  G ++
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 281 RAVEVFKNMESM-----------GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
            A+E+FK M+             G  P V TYN LI G  N+G    A +    M   GI
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+ IT++++I G CK+ +L EA ++F  M + + SP+VVT+NTLI GY + G  + G  
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ EM + GI  D +TY  LI G  K      A  + +++  + + P+  T   ++TG  
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 450 VRKNSERAFQLYKSM 464
            ++  ERA  + + +
Sbjct: 661 SKEELERAVAMLEDL 675



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 154/310 (49%), Gaps = 5/310 (1%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           K  S   + + +D A+  +  M R+R  P+V     +M    ++G  +  + + K ME +
Sbjct: 51  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEML 110

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
               +  ++  L+   C+   L  A+     + K G  P V+TFNTL+ G C + ++ EA
Sbjct: 111 RMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA 170

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M      PNVVT+ TL+NG  + G      +L + ML +G++ + +TY  ++ G
Sbjct: 171 LDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDG 226

Query: 413 LCKEGKTKKAAYLVKDLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           +CK G T  A  L++ +++ S ++PN   Y+ +I G         A  L+  M      P
Sbjct: 227 MCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFP 286

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  +++ FC +  +  A ++L EMLE+ + PD +  S L +     GK   A +L+
Sbjct: 287 DIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELY 346

Query: 532 RKMEIRGLLP 541
            +M  R ++P
Sbjct: 347 DEMLPRSIIP 356


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 199/448 (44%), Gaps = 24/448 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF-------------------DL 174
           +PS LT  T   +++IL K  + + ++ I+  I   D++                   DL
Sbjct: 199 RPSLLTFNT---MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
              +FD ++     CD + + +  L        +   A D   +M   G  P + +    
Sbjct: 256 AFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           L SL D+     A+    +M++    PN+ T   ++    + G  E A+ ++  M + G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN LI+  C +G    A      M  +G  P+  T+N +I  FC  G + +A  
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           IF +M     SPNV+TYNTLI GY + GN      L E M  NG+K D  TY  LI G  
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + GK + A  L   + ++ + PN  TY+A+I G       + A  L+  M+ SG  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +++S F +      A     +M+++ + P+ I  +    GL   G+  LA K+F +M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKESG 562
           E R   P  +     I    + G  E  
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 225/494 (45%), Gaps = 28/494 (5%)

Query: 62  NPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTP-FRVKHV--LLKVQK 118
           +P+PI   T P P     + V+   + L    W+  + L  HL+P  +  HV  +L+  K
Sbjct: 36  SPLPISSTTNPFP-----ELVSKISTILSSPKWEHSSELC-HLSPKLKPHHVVNILQTHK 89

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
           +    L FF W+   K     +     +L+ L ++R F  ++ +   ++ S   +   K 
Sbjct: 90  NTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKR 149

Query: 179 FDSIL--------YSYRMCDSSPLVFDLLFKTYAHRKKFRN---ATDTFCQMRDYGFLPI 227
               L        + Y +C  + L+  L         KF     A D + +M + G  P 
Sbjct: 150 VTQFLSEINSKYDFGYTLCSFTTLLIQL--------GKFDMVDLARDMYIKMLNSGIRPS 201

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + + N  ++ L    RV  A      + R    PN +T   ++   C+   ++ A  +F 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P+  TY+TLI+G C++G L  AM     M + GI+P V T+   +   C  G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
              EA  +  +MK     PN+ T+  LI+G  + G  E+   LY +ML +G+    +TYN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           ALI  LC EG+ + A  + K +  +  +P+  TY+ +I   C+  + ++A  ++  M+++
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   +  L+  +C+  + + A  +L  M    + PD+   +EL SG    GK E A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501

Query: 528 MKLFRKMEIRGLLP 541
             LF  M   G+ P
Sbjct: 502 TSLFYGMMEHGISP 515



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 178/390 (45%), Gaps = 37/390 (9%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   F  L    +   KF  A   + +M   G +P   + N  ++ L    R + 
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET 395

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +K M  +   P+  T N ++  FC +G I++A+ +F  M   G  P+V TYNTLI 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G L+ AM+   +M+ NG++P+  T+  LI GF + GKL  A  +F  M    +SP
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYE---------------------------------- 392
           N VTY  +I+GY  +   +   +L+                                   
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 393 -EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M++ G+  +++TY + I GLC+ G+T  A  +  +++K +  PN  TYS+LI G C  
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 452 KNSERA--FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +E A  + L   +   GC PN   +  L+   C       A ++++ M +K + P   
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           I   L  G     K E A+ +F  M+  G 
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGF 725



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 175/365 (47%), Gaps = 10/365 (2%)

Query: 178 LFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +FD +L +     SSP  + ++ L   Y  +    NA      M+  G  P   +  + +
Sbjct: 434 IFDKMLKA----GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S      +++ A   +  M  + ISPN  T   ++  +  L  ++ A+ +F  M   G +
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           PS  TYN +ISG      +S A  F   M K G+ PNVIT+ + I G C+ G+   A +I
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR---NGIKVDILTYNALILG 412
           F EM+  N  PN+ TY++LI G  Q G +E  A +Y  + R    G + ++ TY  L+ G
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAE-DAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC EG+  +A  LV  + K  L P+   Y AL+ G+C     E A  ++ SM   G + +
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              ++ L+   C+    + A  +   MLEK    D +  + L  GL   G+ +L +KL  
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLH 788

Query: 533 KMEIR 537
            ME R
Sbjct: 789 VMESR 793



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 4/289 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   Y +  K  +A   F +M + G LP  ++ N  +S    +  +  A  F  +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + PNV T    +   C+ G    A ++F  ME   + P++ TY++LI G C +G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 314 LSLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              A  + NL+ +    G +PNV T+ TL+ G C +G+ +EA+++   M+   + P+   
Sbjct: 638 AEDAEMY-NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  L+ G  +    E   +++  M   G ++ +  Y ALI  LCKE   ++A  + + + 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +     +   ++ L+ G      ++   +L   M    C  N   + ML
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 6/275 (2%)

Query: 176 SKLFDSILYSYRMCDSSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           +K+ D++   ++M +S  L     ++++   ++       A +   +M   G LP + + 
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA--VEVFKNM 289
             F+  L  + R  +A   + EM +    PN+YT + +++  C+ G  E A    +   +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G  P+V TY TL+ G C +G    A +    M+K G+QP+   +  L+ G CK  K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  IF  M       ++  Y  LI    +    E    +++ ML      D + +  L
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           + GL KEG+T     L+  ++  +   N  TY  L
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 214/432 (49%), Gaps = 18/432 (4%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL------DSDSFDLPSKLF 179
           FF  V  H  S  ++    I++H+L         +  LR I+      + D  +L S L 
Sbjct: 108 FFKAVSFHGFSH-SIYAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVNLDVSELFSTLL 166

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           DS   ++     S +V ++L K +A      +A D F Q R +G    I SCN  L+   
Sbjct: 167 DSPQDAHM--GGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFA 224

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI-----IERAVEVFKNMESMGF 294
           ++ + +     ++E++ +  SPNV+T  ++M+ +CK        I +A EV + ME  G 
Sbjct: 225 EANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGE 284

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQP-NVITFNTLIFGFCKKGKLHEA 352
            P+V TY   I G C  G +  A++  ++L  +N  QP N   +N +I  FC+ G+LHEA
Sbjct: 285 SPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRN--QPLNSYCYNAVIHEFCRNGELHEA 342

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  +M++  +SP   +Y+ LI+G  + G  E    L EEM+++ +K  ++TY++L  G
Sbjct: 343 FELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDG 402

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G T+ +  +  +L       +  +Y+ LI G  ++++   A +L   M  +G  PN
Sbjct: 403 LCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPN 462

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              F  L+  FC+ +  D+A EV   ML+  +  +    + +    +  G    A+KL  
Sbjct: 463 SFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLIN 522

Query: 533 KMEIRGLLPKGF 544
           +++  G++P  +
Sbjct: 523 EVQDLGIVPNSY 534



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ +   +    +   A +    MR +G  P   S +  +  L    +V+ AL   +EM 
Sbjct: 326 YNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV 385

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++ + P++ T + +    CK G+ E ++ +F N+ + G+   V +YNTLI+G   +  + 
Sbjct: 386 QSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMG 445

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M  NG  PN  TFN LI GFCK+ +L +A  +F+ M    V  N+ T N + 
Sbjct: 446 SACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMA 505

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G+      L  E+   GI  +  TYN +I  LCKE KT+KA  ++  + KN++ 
Sbjct: 506 DEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVF 565

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P A  Y+ LI G   + N  +A  LY  M++ G  P+   + ML++ F        A  +
Sbjct: 566 PCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYL 625

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM++K + PD II + + +G    G  + A  L+ +M   G  P
Sbjct: 626 FKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSP 671



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 156/319 (48%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+   + S N  ++  +    +  A     EMR N   PN +T N ++H FCK   +++A
Sbjct: 423 GYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKA 482

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +EVF  M  +G   ++ T N +      +G    A+K  N ++  GI PN  T+N +I  
Sbjct: 483 LEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKW 542

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+ K  +A  +   M   NV P  + YNTLI+GY +  N      LY +ML+ GI   
Sbjct: 543 LCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPS 602

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TY  LI       K ++A YL K++ K  LVP+   ++ +I G C   + + A+ LY+
Sbjct: 603 IVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYE 662

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G  PN   +  L+  + + +  D+A  +  +M    + PD +  + L  G    G
Sbjct: 663 EMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLG 722

Query: 523 KDELAMKLFRKMEIRGLLP 541
             +   ++F +M+  G+ P
Sbjct: 723 YSDRVREMFNEMKENGVFP 741



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 2/324 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +  ++   +A     +MR  G +P   + N+ +      +R+D AL  +  M 
Sbjct: 431 YNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIML 490

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +  N++T N++   F + G    A+++   ++ +G +P+  TYN +I   C +    
Sbjct: 491 KVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTE 550

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +   +M KN + P  I +NTLI G+ K+    +A  ++++M    + P++VTY  LI
Sbjct: 551 KAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLI 610

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N +      +    L++EM++ G+  D + +  +I G CK G  K A  L +++ +    
Sbjct: 611 NMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKS 670

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ LI G    K  ++A  L+  M R    P+   +  L+  +      DR  E+
Sbjct: 671 PNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREM 730

Query: 496 LLEMLEKCMAPDSIILSELYSGLH 519
             EM E  + P+    + L  GLH
Sbjct: 731 FNEMKENGVFPNYTAYATL--GLH 752



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 105/227 (46%), Gaps = 2/227 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++ K     +K   A +    M      P     N  +           AL  Y +M 
Sbjct: 536 YNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKML 595

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  I P++ T  M+++ F     ++ A  +FK M   G +P    +  +I+G C  G + 
Sbjct: 596 KVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMK 655

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M + G  PNV+T+  LI G+ K  ++ +A+ +F++MK  NV+P+ +TY  LI
Sbjct: 656 SAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALI 715

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYN--ALILGLCKEGKTK 420
            GY  +G S+    ++ EM  NG+  +   Y    L LG+ +E   K
Sbjct: 716 FGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHLGVVREEPAK 762


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/320 (29%), Positives = 166/320 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +++L        +   A      M  YG  P + + N  L S+  + R   A 
Sbjct: 278 CKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE 337

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F  EM R   SP+V T N++++  C+ G+I RA++V + M   G  P+  +YN L+   
Sbjct: 338 KFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHAL 397

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +  A+++ ++M   G  P+++T+NTL+   CK GK+  A  I +++ +   SP +
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNT+I+G  +VG ++    L +EM   G+K DI+TY+ L+ GL +EGK  +A     D
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L++  + PNA TY++++ G C  + + RA      M+  GC+P +  + +L+        
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577

Query: 489 FDRAAEVLLEMLEKCMAPDS 508
              A E+L E+  + +   S
Sbjct: 578 AKEALELLNELCSRGVVKKS 597



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 167/343 (48%), Gaps = 3/343 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L +      K   AT     + D G +P + + N  +S    +  +  AL     + R  
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL---LDRMS 207

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +SP+V T N ++   C  G ++ A+EV          P V TY  LI   C +  +  AM
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M   G +P+V+T+N LI G CK+G+L EA R  + M +    PNV+T+N ++   
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G          EM+R G    ++T+N LI  LC++G   +A  +++ + ++   PN+
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ L+   C  K  ERA +    M+  GC P+   +  L++  C++   D A E+L +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  K  +P  I  + +  GL   GK + A+KL  +M+ +GL P
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKP 490



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 171/382 (44%), Gaps = 2/382 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +ILR + DS       ++ D  +   R C    + + +L +          A     +MR
Sbjct: 217 TILRTLCDSGKLKEAMEVLDRQMQ--RECYPDVITYTILIEATCKESGVGQAMKLLDEMR 274

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + + N  ++ +    R+D A+ F   M      PNV T N+++ + C  G   
Sbjct: 275 DKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWM 334

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +    M   G  PSV T+N LI+  C KGL+  A+     M ++G  PN +++N L+
Sbjct: 335 DAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLL 394

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK  K+  A      M +    P++VTYNTL+    + G  ++   +  ++   G  
Sbjct: 395 HALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCS 454

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I GL K GKT  A  L+ ++    L P+  TYS L+ G       + A   
Sbjct: 455 PVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAF 514

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G +PN   +  +M   C+     RA + L  M+ +   P       L  GL +
Sbjct: 515 FHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAY 574

Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
            G  + A++L  ++  RG++ K
Sbjct: 575 EGLAKEALELLNELCSRGVVKK 596



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/316 (30%), Positives = 155/316 (49%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  L +L DS ++  A+       +    P+V T  +++ A CK   + +A+++
Sbjct: 210 PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKL 269

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   G  P V TYN LI+G C +G L  A++F N M   G QPNVIT N ++   C 
Sbjct: 270 LDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCS 329

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  +A +  +EM     SP+VVT+N LIN   + G       + E+M ++G   + L+
Sbjct: 330 TGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLS 389

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+  LCK+ K ++A   +  +      P+  TY+ L+T  C     + A ++   + 
Sbjct: 390 YNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLG 449

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC P    +  ++    +    D A ++L EM  K + PD I  S L  GL   GK +
Sbjct: 450 SKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVD 509

Query: 526 LAMKLFRKMEIRGLLP 541
            A+  F  +E  G+ P
Sbjct: 510 EAIAFFHDLEEMGVKP 525



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 147/310 (47%), Gaps = 3/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L+ +  ++    F ++M      P++     ++   CK G   +A  V + +E 
Sbjct: 114 NNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILED 173

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P V TYN LISG+C  G +  A++   L+++  + P+V+T+NT++   C  GKL E
Sbjct: 174 SGAVPDVITYNVLISGYCKTGEIGSALQ---LLDRMSVSPDVVTYNTILRTLCDSGKLKE 230

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +          P+V+TY  LI    +         L +EM   G K D++TYN LI 
Sbjct: 231 AMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 290

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G+CKEG+  +A   +  +      PN  T++ ++   C       A +    MIR GC P
Sbjct: 291 GICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSP 350

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   F +L++  C+     RA +VL +M +    P+S+  + L   L    K E A++  
Sbjct: 351 SVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 532 RKMEIRGLLP 541
             M  RG  P
Sbjct: 411 DIMVSRGCYP 420



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 157/356 (44%), Gaps = 1/356 (0%)

Query: 187 RMCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           RM  S  +V ++ + +T     K + A +   +       P + +    + +      V 
Sbjct: 205 RMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVG 264

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+    EMR     P+V T N++++  CK G ++ A+    +M S G  P+V T+N ++
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIIL 324

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              C+ G    A KF   M + G  P+V+TFN LI   C+KG +  A  +  +M     +
Sbjct: 325 RSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCT 384

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN ++YN L++   +    E      + M+  G   DI+TYN L+  LCK+GK   A  +
Sbjct: 385 PNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 444

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  L      P   TY+ +I G      ++ A +L   M   G +P+   +  L+    +
Sbjct: 445 LNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSR 504

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               D A     ++ E  + P++I  + +  GL    +   A+     M  RG  P
Sbjct: 505 EGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKP 560



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 142/304 (46%), Gaps = 18/304 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I+L  +    ++  +E  L  ++                   + C  S + F++L  
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIR------------------KGCSPSVVTFNILIN 360

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A D   +M  +G  P   S N  L +L   ++++ A+ +   M      P
Sbjct: 361 FLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYP 420

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++ T N ++ A CK G ++ AVE+   + S G  P + TYNT+I G    G    A+K  
Sbjct: 421 DIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLL 480

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M+  G++P++IT++TL+ G  ++GK+ EA   F +++   V PN +TYN+++ G  + 
Sbjct: 481 DEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKA 540

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
             +         M+  G K    +Y  LI GL  EG  K+A  L+ +L    +V  +S  
Sbjct: 541 RQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAE 600

Query: 442 SALI 445
             ++
Sbjct: 601 QVVV 604


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 198/405 (48%), Gaps = 24/405 (5%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF-DSILYSYRMCDSSP 193
           P    L+  +I  H+    R+  ++ +IL   L    F  P + F +  +++Y+   S P
Sbjct: 146 PHPHLLQCFAIAAHLAV--REPGTARAILVRAL---RFPSPHRHFVEQFIFTYKAFSSDP 200

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             FDLL       +  R       ++R YG  P  ESCN  LS L     +D A+  ++E
Sbjct: 201 ASFDLLLLCLPSAELLR-------RLRQYGLSPSPESCNAVLSRL----PLDEAIALFRE 249

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       NV + N+++ A    G ++ A + F  M S    P V TY T++ G+C +G 
Sbjct: 250 L----PDKNVCSHNILLKALLSAGRLKDACQHFDEMSS---PPDVVTYGTMVHGYCVRGE 302

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+K  + M   G++ N   + ++I   C KG++ +A R+  +M    V+ + V + T
Sbjct: 303 LENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTT 362

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G+   G+      L+EEM + G+  D +T+ ALI GLC+ G+ K+A  +++++    
Sbjct: 363 VISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKG 422

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L  +  TY+ LI G C R N   AF+++  M+     PN   +  L    C+  D   A 
Sbjct: 423 LDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAAN 482

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           E+L EM  K +  +    + L +GL   G  E AM++  +ME  G
Sbjct: 483 ELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 174/377 (46%), Gaps = 27/377 (7%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP---LVFDLLFKTYAHRKKFRNATDTFCQ 218
           +L+ +L +       + FD +        SSP   + +  +   Y  R +  NA     +
Sbjct: 261 LLKALLSAGRLKDACQHFDEM--------SSPPDVVTYGTMVHGYCVRGELENAVKLLDE 312

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G           ++ L +  +V  AL   ++M  + ++ +      V+  FC  G 
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A  +F+ M+  G      T+  LI+G C  G L  A +    M   G+  +V+T+  
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+CK+G + EA R+ +EM    V+PNVVTY  L +G  + G+      L  EM   G
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +++++ TYN+LI GLCK G  ++A  ++ +++      +  TY+ LI   C     +RA 
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL------- 511
            + + M+  G +P+   + +LM+ FC +   +   ++L  MLEK + P+ +         
Sbjct: 553 NMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQY 612

Query: 512 ---------SELYSGLH 519
                    +E+Y G+H
Sbjct: 613 CIDKNMKSTTEIYKGMH 629



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 163/346 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF  +   +  +     A   F +M+  G      +    ++ L  +  +  A    +E
Sbjct: 358 VVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQE 417

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +V T  +++  +CK G +  A  V   M      P+V TY  L  G C +G 
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M   G++ NV T+N+LI G CK G L +A RI +EM+A     +V TY T
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + G  +   ++ +EML  GIK  I TYN L+ G C  G+ +    L++ + + +
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY++L+   C+ KN +   ++YK M      PN++ + +L+   C+  +   A 
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               EM+EK +   +   S L   L+   K   A   F KM   GL
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGL 703



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 18/360 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+ +++ L +  + K ++ +L+ ++D                  +  D   + + +L  
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVD------------------KGLDVDVVTYTVLID 435

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y  R     A     +M      P + +       L     V  A     EM    +  
Sbjct: 436 GYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL 495

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NVYT N +++  CK G +E+A+ +   ME+ G    V TY TLI   C  G    A    
Sbjct: 496 NVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNML 555

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   GI+P++ T+N L+ GFC  G++    ++   M   NV PNVVTYN+L+  Y   
Sbjct: 556 QEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCID 615

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            N +    +Y+ M    +  +  TYN LI G CK    K+A Y  +++ +  L   AS+Y
Sbjct: 616 KNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSY 675

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           SALI     +K    A   +  M   G      ++   M      ++ +    +  E++E
Sbjct: 676 SALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 7/159 (4%)

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++ ++N L+  L   G+ K A    +  D+ S  P+  TY  ++ G CVR   E A +L 
Sbjct: 254 NVCSHNILLKALLSAGRLKDAC---QHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLL 310

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G   N  ++  +++  C       A  VL +M    +A D+++ + + SG   C
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGF--C 368

Query: 522 GKDELAM--KLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            K +LA   +LF +M+ RGL          IN     GE
Sbjct: 369 SKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGE 407


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 170/314 (54%), Gaps = 4/314 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII----ERAVEVFK 287
           NK L SL+ S+     L   ++M    I PN++  N++++ FC+LG+I     +A     
Sbjct: 90  NKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHD 149

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            + ++GF     +Y TLI G C  G    A+     ++   +Q N + +NT+I+G CK  
Sbjct: 150 KLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDK 209

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            +++A  ++SEM +  +SPNVVTY+ LI+G+  VG  +    L+ +++   IK D  T+N
Sbjct: 210 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFN 269

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ G CK+ K K+   +   + K  ++P+  TY++L+ G C+ K    A  ++ +M + 
Sbjct: 270 ILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG 329

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P+   + +L++ FC+ +  D+A  +  EM  K + P+ +  + L  GL   G+   A
Sbjct: 330 GVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYA 389

Query: 528 MKLFRKMEIRGLLP 541
           ++L  +M  RG+ P
Sbjct: 390 LQLVDQMHDRGVPP 403



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 190/399 (47%), Gaps = 33/399 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++  ++H L K  + +++  +L+ + D     L + ++++++Y   MC            
Sbjct: 162 SYGTLIHGLCKVGETRAALDLLQRV-DGKLVQLNAVMYNTVIYG--MCKD---------- 208

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                K   +A D + +M   G  P + + +  +S      ++  A+  + ++    I P
Sbjct: 209 -----KHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKP 263

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + YT N+++  FCK   ++    VF  M   G IP V TYN+L+ G+C    ++ A    
Sbjct: 264 DGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIF 323

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M + G+ P++ ++N LI GFCK  K+ +A  +F+EM   N+ PNVVTYN+LI+G  + 
Sbjct: 324 NTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKS 383

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L ++M   G+  +ILTYN++I  L K  +  KA  L+       + P+  TY
Sbjct: 384 GRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTY 443

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C  +  +     Y  MI                 FC+   FD A  +L +M +
Sbjct: 444 TILIDGLCKVEGYDITVNTYNVMIHG---------------FCKKGLFDEALSLLSKMKD 488

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
               P+++        L    +++ A KLFR+M  RGLL
Sbjct: 489 SSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 13/288 (4%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ AV +F  +      P    +N ++            +     ME  GI+PN+   N 
Sbjct: 67  VDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNI 126

Query: 339 LIFGFCKKG----KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           LI+ FC+ G    ++H+A     ++ A     + V+Y TLI+G  +VG +     L + +
Sbjct: 127 LIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRV 186

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
               ++++ + YN +I G+CK+     A  L  ++    + PN  TYSALI+G  V    
Sbjct: 187 DGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKL 246

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A  L+  +I    +P+ + F +L+  FC++        V   M+++ + PD +  + L
Sbjct: 247 KDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSL 306

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
             G     +   A  +F  M   G+ P          GF K++ ++ A
Sbjct: 307 MDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKA 354



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/266 (22%), Positives = 126/266 (47%), Gaps = 20/266 (7%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +   +K +     F  M   G +P + + N  +      + V+ A   +  M 
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMA 327

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P++ + N++++ FCK+  +++A+ +F  M     IP+V TYN+LI G    G +S
Sbjct: 328 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 387

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN-------- 367
            A++  + M   G+ PN++T+N++I    K  ++ +A  + ++ K   + P+        
Sbjct: 388 YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILI 447

Query: 368 ------------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
                       V TYN +I+G+ + G  +   SL  +M  +    + +TY   I  L  
Sbjct: 448 DGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLD 507

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTY 441
             +  KA  L +++    L+  +++Y
Sbjct: 508 NNENDKAEKLFREMITRGLLNRSASY 533



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 97/217 (44%), Gaps = 4/217 (1%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N I++++    F     + +A  +F+ +   N +P    +N ++    +  +     SL 
Sbjct: 50  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTK---KAAYLVKD-LDKNSLVPNASTYSALITG 447
           ++M   GIK ++   N LI   C+ G        A+L  D L       +  +Y  LI G
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C    +  A  L + +     + N  ++  ++   C+++  + A ++  EM+ K ++P+
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  S L SG    GK + A+ LF K+ +  + P G+
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGY 266


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 199/448 (44%), Gaps = 24/448 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF-------------------DL 174
           +PS LT  T   +++IL K  + + ++ I+  I   D++                   DL
Sbjct: 199 RPSLLTFNT---MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDL 255

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
              +FD ++     CD + + +  L        +   A D   +M   G  P + +    
Sbjct: 256 AFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIP 313

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           L SL D+     A+    +M++    PN+ T   ++    + G  E A+ ++  M + G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN LI+  C +G    A      M  +G  P+  T+N +I  FC  G + +A  
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           IF +M     SPNV+TYNTLI GY + GN      L E M  NG+K D  TY  LI G  
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + GK + A  L   + ++ + PN  TY+A+I G       + A  L+  M+ SG  P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +++S F +      A     +M+++ + P+ I  +    GL   G+  LA K+F +M
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKESG 562
           E R   P  +     I    + G  E  
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641



 Score =  171 bits (434), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 225/494 (45%), Gaps = 28/494 (5%)

Query: 62  NPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTP-FRVKHV--LLKVQK 118
           +P+PI   T P P     + V+   + L    W+  + L  HL+P  +  HV  +L+  K
Sbjct: 36  SPLPISSTTNPFP-----ELVSKISTILSSPKWEHSSELC-HLSPKLKPHHVVNILQTHK 89

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
           +    L FF W+   K     +     +L+ L ++R F  ++ +   ++ S   +   K 
Sbjct: 90  NTDSVLRFFFWISRRKFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKR 149

Query: 179 FDSIL--------YSYRMCDSSPLVFDLLFKTYAHRKKFRN---ATDTFCQMRDYGFLPI 227
               L        + Y +C  + L+  L         KF     A D + +M + G  P 
Sbjct: 150 VTQFLSEINSKYDFGYTLCSFTTLLIQL--------GKFDMVDLARDMYIKMLNSGIRPS 201

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + + N  ++ L    RV  A      + R    PN +T   ++   C+   ++ A  +F 
Sbjct: 202 LLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD 261

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P+  TY+TLI+G C++G L  AM     M + GI+P V T+   +   C  G
Sbjct: 262 RMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAG 321

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
              EA  +  +MK     PN+ T+  LI+G  + G  E+   LY +ML +G+    +TYN
Sbjct: 322 CSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYN 381

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           ALI  LC EG+ + A  + K +  +  +P+  TY+ +I   C+  + ++A  ++  M+++
Sbjct: 382 ALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKA 441

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   +  L+  +C+  + + A  +L  M    + PD+   +EL SG    GK E A
Sbjct: 442 GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHA 501

Query: 528 MKLFRKMEIRGLLP 541
             LF  M   G+ P
Sbjct: 502 TSLFYGMMEHGISP 515



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 178/390 (45%), Gaps = 37/390 (9%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   F  L    +   KF  A   + +M   G +P   + N  ++ L    R + 
Sbjct: 336 RGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFET 395

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +K M  +   P+  T N ++  FC +G I++A+ +F  M   G  P+V TYNTLI 
Sbjct: 396 AFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY 455

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G L+ AM+   +M+ NG++P+  T+  LI GF + GKL  A  +F  M    +SP
Sbjct: 456 GYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISP 515

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYE---------------------------------- 392
           N VTY  +I+GY  +   +   +L+                                   
Sbjct: 516 NHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFC 575

Query: 393 -EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M++ G+  +++TY + I GLC+ G+T  A  +  +++K +  PN  TYS+LI G C  
Sbjct: 576 GKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQE 635

Query: 452 KNSERA--FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +E A  + L   +   GC PN   +  L+   C       A ++++ M +K + P   
Sbjct: 636 GRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEE 695

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           I   L  G     K E A+ +F  M+  G 
Sbjct: 696 IYRALLIGECKNLKVESALNIFYSMDTLGF 725



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 176/365 (48%), Gaps = 10/365 (2%)

Query: 178 LFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +FD +L +     SSP  + ++ L   Y  +    NA      M+  G  P   +  + +
Sbjct: 434 IFDKMLKA----GSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S      +++ A   +  M  + ISPN  T   ++  +  L  ++ A+ +F  M   G +
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNL 549

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           PS  TYN +ISG      +S A  F   M K G+ PNVIT+ + I G C+ G+   A +I
Sbjct: 550 PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKI 609

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR---NGIKVDILTYNALILG 412
           F EM+  N  PN+ TY++LI G  Q G +E  A +Y  + R    G + ++ TY  L+ G
Sbjct: 610 FHEMEKRNYFPNLYTYSSLIYGLCQEGRAE-DAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC EG+  +A  LV  + K  L P+   Y AL+ G+C     E A  ++ SM   G + +
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              ++ L+   C+    + A  +   MLEK    D ++ + L  GL   G+ +L +KL  
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLH 788

Query: 533 KMEIR 537
            ME R
Sbjct: 789 VMESR 793



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 133/289 (46%), Gaps = 4/289 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   Y +  K  +A   F +M + G LP  ++ N  +S    +  +  A  F  +
Sbjct: 518 VTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  + PNV T    +   C+ G    A ++F  ME   + P++ TY++LI G C +G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 314 LSLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              A  + NL+ +    G +PNV T+ TL+ G C +G+ +EA+++   M+   + P+   
Sbjct: 638 AEDAEMY-NLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  L+ G  +    E   +++  M   G ++ +  Y ALI  LCKE   ++A  + + + 
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +     +   ++ L+ G      ++   +L   M    C  N   + ML
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 122/275 (44%), Gaps = 6/275 (2%)

Query: 176 SKLFDSILYSYRMCDSSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           +K+ D++   ++M +S  L     ++++   ++       A +   +M   G LP + + 
Sbjct: 531 AKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITY 590

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA--VEVFKNM 289
             F+  L  + R  +A   + EM +    PN+YT + +++  C+ G  E A    +   +
Sbjct: 591 TSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARL 650

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G  P+V TY TL+ G C +G    A +    M+K G+QP+   +  L+ G CK  K+
Sbjct: 651 THYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKV 710

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  IF  M       ++  Y  LI    +    E    +++ ML      D + +  L
Sbjct: 711 ESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVL 770

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           + GL KEG+T     L+  ++  +   N  TY  L
Sbjct: 771 LDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/329 (31%), Positives = 175/329 (53%), Gaps = 14/329 (4%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PI E   K L SL+       A+  +++M    I+ N+ TLN++++ F +LG    +  V
Sbjct: 59  PIFEF-GKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117

Query: 286 FKNMESMGFIPSVTT-------------YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           F N+   G+ P+V T             Y TLI+G C  G    A++    ++   +QPN
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPN 177

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+ +NT+I   CK   ++EA  ++SEM +  +SP+VVTY+ LI+G+  VG  +    L+ 
Sbjct: 178 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFN 237

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           +M+   IK D+ T+N L+ G CK+GK K+   +   + K  + PN  TY +L+ G C+ K
Sbjct: 238 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 297

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
              +A  ++ +M + G  P+   + ++++ FC+ +  D A  +  +M  K + P+ +  +
Sbjct: 298 QVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYT 357

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  GL   GK   A+KL  +M  RG+ P
Sbjct: 358 SLIDGLCKSGKISYALKLVDEMHDRGVPP 386



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 146/303 (48%), Gaps = 8/303 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +    + PNV   N ++ + CK+ ++  A +++  M S G  P V TY+ LIS
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALIS 221

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G L  A+   N M    I+P+V TFN L+ GFCK GK+ E   +F+ M    + P
Sbjct: 222 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 281

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTY +L++GY  V       S++  M + G+  D  +YN +I G CK  K  +A  L 
Sbjct: 282 NVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLF 341

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +   +++PN  TY++LI G C       A +L   M   G  P+   +  ++   C+N
Sbjct: 342 KKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKN 401

Query: 487 EDFDRAAEVLLEMLEKCMAP--------DSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              D+A  +L ++ ++            D    + +  G    G    A+ L  KME  G
Sbjct: 402 HQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNG 461

Query: 539 LLP 541
            +P
Sbjct: 462 RIP 464



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 167/323 (51%), Gaps = 8/323 (2%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + S+   + V+ A   Y EM    ISP+V T + ++  F  +G ++ A+++
Sbjct: 176 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDL 235

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P V T+N L+ G C  G +        +M K GI+PNV+T+ +L+ G+C 
Sbjct: 236 FNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCL 295

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++++AN IF+ M    V+P+  +YN +ING+ ++   +   +L+++M    I  +++T
Sbjct: 296 VKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVT 355

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF------- 458
           Y +LI GLCK GK   A  LV ++    + P+  TYS+++   C     ++A        
Sbjct: 356 YTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 415

Query: 459 -QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            Q+++ +   G   + + + +++  FC    F+ A  +L +M +    PD+     +   
Sbjct: 416 DQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILS 475

Query: 518 LHHCGKDELAMKLFRKMEIRGLL 540
           L    ++++A KL R+M  RGLL
Sbjct: 476 LFKKDENDMAEKLLREMIARGLL 498



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 162/324 (50%), Gaps = 8/324 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++   + ++++ +  +    K    A D + +M   G  P + + +  +S      ++  
Sbjct: 172 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKD 231

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  + +M    I P+VYT N+++  FCK G ++    VF  M   G  P+V TY +L+ 
Sbjct: 232 AIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMD 291

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    ++ A    N M + G+ P+  ++N +I GFCK  K+ EA  +F +M   N+ P
Sbjct: 292 GYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIP 351

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTY +LI+G  + G       L +EM   G+  DI+TY++++  LCK  +  KA  L+
Sbjct: 352 NVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALL 411

Query: 427 --------KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
                   +DL       +   Y+ +I G CV+     A  L   M  +G  P+   +E+
Sbjct: 412 TKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEI 471

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEK 502
           ++ +  + ++ D A ++L EM+ +
Sbjct: 472 IILSLFKKDENDMAEKLLREMIAR 495



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 157/316 (49%), Gaps = 16/316 (5%)

Query: 246 IALGFYKEMRRNRISPNVYTL-------------NMVMHAFCKLGIIERAVEVFKNMESM 292
           ++   +  + +    PNV TL               +++  CK+G    A+++ + ++  
Sbjct: 113 LSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGK 172

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
              P+V  YNT+I   C   L++ A    + M   GI P+V+T++ LI GF   GKL +A
Sbjct: 173 LVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDA 232

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F++M   N+ P+V T+N L++G+ + G  + G +++  M++ GIK +++TY +L+ G
Sbjct: 233 IDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDG 292

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C   +  KA  +   + +  + P+  +Y+ +I G C  K  + A  L+K M      PN
Sbjct: 293 YCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPN 352

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+   C++     A +++ EM ++ + PD I  S +   L    + + A+ L  
Sbjct: 353 VVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLT 412

Query: 533 KME---IRGLLPKGFD 545
           K++      L  KG++
Sbjct: 413 KLKDQVFEDLFVKGYN 428



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 107/240 (44%), Gaps = 13/240 (5%)

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +L   F  L+ +    P +  F  ++    K    H A  +  +M+   ++ N+VT N L
Sbjct: 42  NLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNIL 101

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILT-------------YNALILGLCKEGKTKK 421
           IN + Q+G + +  S++  +L+ G   +++T             Y  LI GLCK G+ + 
Sbjct: 102 INCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARA 161

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ +D   + PN   Y+ +I   C  K    AF LY  M+  G  P+   +  L+S
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALIS 221

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            F        A ++  +M+ + + PD    + L  G    GK +    +F  M  +G+ P
Sbjct: 222 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 281



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 43/247 (17%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +    K +     F  M   G  P + +    +      ++V+ A   +  M 
Sbjct: 251 FNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMA 310

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P+  + N++++ FCK+  ++ A+ +FK M     IP+V TY +LI G C  G +S
Sbjct: 311 QGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKIS 370

Query: 316 LAMKFKNLMEKNGIQPNVITFNT------------------------------------- 338
            A+K  + M   G+ P++IT+++                                     
Sbjct: 371 YALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLD 430

Query: 339 ------LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
                 +I GFC KG  +EA  + S+M+     P+  TY  +I    +   ++M   L  
Sbjct: 431 VYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLR 490

Query: 393 EMLRNGI 399
           EM+  G+
Sbjct: 491 EMIARGL 497


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 37/454 (8%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           +++ FF ++        ++ +  +V HIL    +FK  +S+++ ++        S + D 
Sbjct: 99  VAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDL 158

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +L  +R  DS+ LV+D+L   Y+  +   +A     +M+D  F   + + N  L ++   
Sbjct: 159 LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM--- 215

Query: 242 ERVDIALGFYKEMR----------------------------------RNRISPNVYTLN 267
              DI    Y E++                                     + P++ ++N
Sbjct: 216 RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSIN 275

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M  FCK+G+I+ A   F  M   G +    +YN L+ G C  G +  A+ F + MEK+
Sbjct: 276 TIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G++P+V+T+NTL  GF   G +  A ++  +M    ++P++VTY TLI G+ Q+GN E  
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L +E L  G K++++ YN L+  LCK G+ ++A  L  +++   L P+   YS LI G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     +RA+QLY+ M      P+      ++    +N +   A           +  D
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++ + +  G         AM+L+ KM  RG+ P
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 166/357 (46%), Gaps = 39/357 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME- 290
           N  LS L    R++ AL  + EM   R+ P+    ++++H  CK G ++RA ++++ M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 291 ----------------------------------SMGFIPSVTTYNTLISGHCNKGLLSL 316
                                              M  +  V  YN +I G+     ++ 
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           AM+    M + GI P+V+TFNTLI GFC++G L EA ++   ++   + P+VVTY TL+N
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            Y +VGN +       EM  N +    +TY  LI GLC++ K  ++  L++ +    L+P
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           ++ TY+ +I   C  K   +A QLY  M+   C P +  +++L++  C   D      ++
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMV 714

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTIN 551
           + + ++ +         +     HC K ++  A+  F +M  +G +    D    IN
Sbjct: 715 VSIEDRNITLKKXTYMTIIKA--HCAKGQVSKALGYFNQMLAKGFVISIRDYSAVIN 769



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 150/330 (45%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   FC M   G L    S N  L  L  +  +D ALGF  +M ++ + P+V T N +  
Sbjct: 290 ARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK 349

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F  LG++  A +V + M   G  P + TY TLI GHC  G +  A+K +      G + 
Sbjct: 350 GFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKL 409

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NVI +N L+   CK G++ EA  +F EM+   + P+ + Y+ LI+G  + G  +    LY
Sbjct: 410 NVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLY 469

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M             A++LGL K G   +A        +  L+ +   Y+ +I G    
Sbjct: 470 EQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL 529

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A QLY  MI  G  P+   F  L++ FC+  D   A ++L  +  K + P  +  
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTY 589

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +     G  +       +ME   ++P
Sbjct: 590 TTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           RN  DT+ +M     +  +   N  +   +  + +  A+  Y +M    I+P+V T N +
Sbjct: 501 RNYFDTWTRM---DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTL 557

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ FC+ G +  A ++ + +   G +PSV TY TL++ +C  G +     F + ME N +
Sbjct: 558 INGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAV 617

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P  +T+  LI G C++ K+HE+ ++   M A  + P+ VTYNT+I  + +         
Sbjct: 618 VPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ 677

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LY  ML +      +TY  LI  LC  G  K    +V  ++  ++     TY  +I   C
Sbjct: 678 LYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTYMTIIKAHC 737

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +    +A   +  M+  G   +   +  +++  C+      A    + ML + + PD  
Sbjct: 738 AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797

Query: 510 ILSELYSGLHHCGKD 524
           I   + +  H  G +
Sbjct: 798 ICKTVLNAFHQQGNN 812



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/277 (21%), Positives = 119/277 (42%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L   +  R     A      +R  G +P + +    +++  +   +     F 
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFL 609

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM  N + P   T  +++   C+   +  ++++ + M + G +P   TYNT+I   C  
Sbjct: 610 HEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKG 669

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             ++ A++  N+M  +   P  +T+  LI   C  G L + +R+   ++  N++    TY
Sbjct: 670 KEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKXTY 729

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            T+I  +   G        + +ML  G  + I  Y+A+I  LCK G   +A Y    +  
Sbjct: 730 MTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLS 789

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
             + P+      ++     + N+   F+    +++SG
Sbjct: 790 EGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826


>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Brachypodium distachyon]
          Length = 746

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A   F  M+  G  P   + N  L  LL   R   A+G  + M R  + P V T   V+
Sbjct: 366 GAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVV 425

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
               + G +E A +V + M S G +P+   ++ +I+G C  G +  A +  + M   GI+
Sbjct: 426 DGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIK 485

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PNV+ ++ +I G  + GK+ EA  +F EM      PN++TY++++ GY Q+G+S    S 
Sbjct: 486 PNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSF 545

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           +E+MLR G   + +TY+ LI GLC  G++K A  + K +     VP+   Y+++I G CV
Sbjct: 546 WEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCV 605

Query: 451 RKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
               +   +L+  M+ R    P+   + +L+    + +D  RA ++L +ML++   PD++
Sbjct: 606 SGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTV 665



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 156/304 (51%), Gaps = 1/304 (0%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +S+L D+ RVD A+    EM  + +       N V+ A  + G +  A ++F  M+  G 
Sbjct: 321 VSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGC 379

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            PS  TYN L+ G    G    AM     ME+  + P V+T+  ++ G  + G+L +A +
Sbjct: 380 APSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACK 439

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  EM++  + PN   ++ +I G+ ++G  +  + +++ M+  GIK +++ Y+A+I GL 
Sbjct: 440 VIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLA 499

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + GK  +A  L +++ +   VPN  TYS+++ G     +S +A   ++ M+R GC PN  
Sbjct: 500 RCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAV 559

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L++  C       A  V   ML +   PD+I  + +  G    G  +  ++LF  M
Sbjct: 560 TYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDM 619

Query: 535 EIRG 538
             RG
Sbjct: 620 LARG 623



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 1/307 (0%)

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           E+ N  L ++L +  V  A   +  M+    +P+  T N+++H     G  + A+ V + 
Sbjct: 349 EAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRR 408

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ME    +P V TY  ++ G    G L  A K    M   G+ PN   F+ +I GFCK G+
Sbjct: 409 MERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGE 468

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A+R++  M A  + PNVV Y+ +I+G  + G       L+ EM+      +I+TY++
Sbjct: 469 VDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSS 528

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           ++ G  + G + +A    +D+ +    PNA TYS LI G C    S+ A  ++K M+  G
Sbjct: 529 MVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRG 588

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELA 527
           C P+   +  ++  FC +   D    +  +ML +    PD I  + L  GL        A
Sbjct: 589 CVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRA 648

Query: 528 MKLFRKM 534
           M L  +M
Sbjct: 649 MDLLNQM 655



 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 25/396 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
            H +V+  +     F     +L  +L +      +KLF       + C  S   +++L  
Sbjct: 337 VHEMVVDGVVAAEAFNP---VLGAMLRTGDVTGAAKLFS--FMQLKGCAPSAATYNVLLH 391

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 + + A     +M     +P + +    +  L+   R++ A    +EMR   + P
Sbjct: 392 GLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVP 451

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKF 320
           N +  + V+  FCKLG ++RA  V+  M + G  P+V  Y+ +I G    G ++ A + F
Sbjct: 452 NEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLF 511

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           + ++E   + PN++T+++++ G+ + G   +A   + +M     +PN VTY+ LING   
Sbjct: 512 REMIEAKCV-PNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCN 570

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD-LDKNSLVPNAS 439
           VG S+    +++ ML  G   D + Y ++I G C  G       L  D L +    P+  
Sbjct: 571 VGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVI 630

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPN-----------------KHIFEMLMST 482
            Y+ L+ G    K+  RA  L   M+   C P+                 +   E L+  
Sbjct: 631 CYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVR 690

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            C  +    A EVL+ ML K + P++ +L  +  G+
Sbjct: 691 LCNRKRNKAAGEVLMVMLAKYIVPEAAVLEMVVRGV 726



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 137/291 (47%), Gaps = 1/291 (0%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++ +   ++ P+ +T + V+ A    G ++ AV +   M   G + +   +N ++     
Sbjct: 302 HRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAMLR 360

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G ++ A K  + M+  G  P+  T+N L+ G    G+   A  +   M+   V P V+T
Sbjct: 361 TGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMT 420

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  +++G  + G  E    + EEM   G+  +   ++ +I G CK G+  +A+ +   + 
Sbjct: 421 YGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMV 480

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + PN   YSA+I G         A  L++ MI + C PN   +  ++  + Q  D  
Sbjct: 481 AAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSS 540

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A     +ML     P+++  S L +GL + G+ + AM +++ M  RG +P
Sbjct: 541 QALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVP 591



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 121/281 (43%), Gaps = 18/281 (6%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            VF  +   +    +   A+  +  M   G  P +   +  +  L    ++  A   ++E
Sbjct: 454 FVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFRE 513

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +  PN+ T + ++  + ++G   +A+  +++M  +G  P+  TY+ LI+G CN G 
Sbjct: 514 MIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGR 573

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNVVTYN 372
              AM     M   G  P+ I + ++I GFC  G +    R+F +M A  +  P+V+ YN
Sbjct: 574 SKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYN 633

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN-----------------ALILGLCK 415
            L++G  +  +      L  +ML      D +T N                  L++ LC 
Sbjct: 634 VLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCN 693

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             + K A  ++  +    +VP A+    ++ G C RK   R
Sbjct: 694 RKRNKAAGEVLMVMLAKYIVPEAAVLEMVVRGVCRRKRVWR 734



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 91/224 (40%), Gaps = 44/224 (19%)

Query: 329 IQPNVITFNTLIFGFCK-------KGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQ 380
           + P +++FN L+   C        +  L  A R+    + A  + P+  TY+T+++    
Sbjct: 267 LAPTLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYSTVVSALAD 326

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +   +L  EM+ +G+ V    +N ++  + + G    AA L   +      P+A+T
Sbjct: 327 AGRVDDAVALVHEMVVDGV-VAAEAFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G  +   ++ A  + + M R                          AEV+    
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMER--------------------------AEVV---- 415

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                P  +    +  GL  CG+ E A K+  +M  +GL+P  F
Sbjct: 416 -----PGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVPNEF 454


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 211/454 (46%), Gaps = 37/454 (8%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           +++ FF ++        ++ +  +V HIL    +FK  +S+++ ++        S + D 
Sbjct: 99  VAVAFFYFLINEYGFRHSIFSQFVVSHILAGKGRFKELDSVIKNLIVDQGLGSASIICDL 158

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +L  +R  DS+ LV+D+L   Y+  +   +A     +M+D  F   + + N  L ++   
Sbjct: 159 LLEKFRNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNM--- 215

Query: 242 ERVDIALGFYKEMR----------------------------------RNRISPNVYTLN 267
              DI    Y E++                                     + P++ ++N
Sbjct: 216 RHTDIMWDVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSIN 275

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M  FCK+G+I+ A   F  M   G +    +YN L+ G C  G +  A+ F + MEK+
Sbjct: 276 TIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKH 335

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G++P+V+T+NTL  GF   G +  A ++  +M    ++P++VTY TLI G+ Q+GN E  
Sbjct: 336 GVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEA 395

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L +E L  G K++++ YN L+  LCK G+ ++A  L  +++   L P+   YS LI G
Sbjct: 396 LKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHG 455

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     +RA+QLY+ M      P+      ++    +N +   A           +  D
Sbjct: 456 LCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMED 515

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++ + +  G         AM+L+ KM  RG+ P
Sbjct: 516 VVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITP 549



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 39/357 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME- 290
           N  LS L    R++ AL  + EM   R+ P+    ++++H  CK G ++RA ++++ M  
Sbjct: 415 NMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRL 474

Query: 291 ----------------------------------SMGFIPSVTTYNTLISGHCNKGLLSL 316
                                              M  +  V  YN +I G+     ++ 
Sbjct: 475 KRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAE 534

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           AM+    M + GI P+V+TFNTLI GFC++G L EA ++   ++   + P+VVTY TL+N
Sbjct: 535 AMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMN 594

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            Y +VGN +       EM  N +    +TY  LI GLC++ K  ++  L++ +    L+P
Sbjct: 595 AYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLP 654

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           ++ TY+ +I   C  K   +A QLY  M+   C P +  +++L++  C   D      ++
Sbjct: 655 DSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMV 714

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTIN 551
           + + ++ +    +    +     HC K ++  A+  F +M  +G +    D    IN
Sbjct: 715 VSIEDRNITLKKVTYMTIIKA--HCAKGQVSKALGYFNQMLAKGFVISIRDYSAVIN 769



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 150/330 (45%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   FC M   G L    S N  L  L  +  +D ALGF  +M ++ + P+V T N +  
Sbjct: 290 ARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAK 349

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F  LG++  A +V + M   G  P + TY TLI GHC  G +  A+K +      G + 
Sbjct: 350 GFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKL 409

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NVI +N L+   CK G++ EA  +F EM+   + P+ + Y+ LI+G  + G  +    LY
Sbjct: 410 NVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLY 469

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M             A++LGL K G   +A        +  L+ +   Y+ +I G    
Sbjct: 470 EQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRL 529

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A QLY  MI  G  P+   F  L++ FC+  D   A ++L  +  K + P  +  
Sbjct: 530 DGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTY 589

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +     G  +       +ME   ++P
Sbjct: 590 TTLMNAYCEVGNMQEMFHFLHEMEANAVVP 619



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 3/315 (0%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           RN  DT+ +M     +  +   N  +   +  + +  A+  Y +M    I+P+V T N +
Sbjct: 501 RNYFDTWTRM---DLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTL 557

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ FC+ G +  A ++ + +   G +PSV TY TL++ +C  G +     F + ME N +
Sbjct: 558 INGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAV 617

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P  +T+  LI G C++ K+HE+ ++   M A  + P+ VTYNT+I  + +         
Sbjct: 618 VPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQ 677

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           LY  ML +      +TY  LI  LC  G  K    +V  ++  ++     TY  +I   C
Sbjct: 678 LYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTYMTIIKAHC 737

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +    +A   +  M+  G   +   +  +++  C+      A    + ML + + PD  
Sbjct: 738 AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797

Query: 510 ILSELYSGLHHCGKD 524
           I   + +  H  G +
Sbjct: 798 ICKTVLNAFHQQGNN 812



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/277 (21%), Positives = 120/277 (43%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L   +  R     A      +R  G +P + +    +++  +   +     F 
Sbjct: 550 SVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFL 609

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM  N + P   T  +++   C+   +  ++++ + M + G +P   TYNT+I   C  
Sbjct: 610 HEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKG 669

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             ++ A++  N+M  +   P  +T+  LI   C  G L + +R+   ++  N++   VTY
Sbjct: 670 KEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLKKVTY 729

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            T+I  +   G        + +ML  G  + I  Y+A+I  LCK G   +A Y    +  
Sbjct: 730 MTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLS 789

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
             + P+      ++     + N+   F+    +++SG
Sbjct: 790 EGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 181/354 (51%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++ ++  ++++++  +    K   +A   + +M      P + + N  +       ++  
Sbjct: 193 KLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKE 252

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G + EM    I+P+VYT ++++ A CK G I RA  +   M   G IP V TY++L+ 
Sbjct: 253 AFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMD 312

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    ++ A    + M + G+ P+  ++N +I G  K   + EA  +F EM    ++P
Sbjct: 313 GYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAP 372

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYN+LI+G  ++G       L +EM  NGI  DILTYN+LI  LCK     KA  LV
Sbjct: 373 DTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALV 432

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +    + P+  TY+ LI G C     + A  +++ ++  G   N   + ++++  C+ 
Sbjct: 433 KKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKE 492

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             F+ A  +L +M    + PD++    +   L    ++E A KL R+M IRGLL
Sbjct: 493 GLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 165/312 (52%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++SL   + V  A   Y EM   RISP+V T N ++  FC +G ++ A  +F  M  
Sbjct: 203 NIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVL 262

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P V T++ L+   C  G ++ A     +M K G+ P+V+T+++L+ G+C   ++++
Sbjct: 263 KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNK 322

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +FS M    V+P+  +YN +ING G++   +   SL++EM   GI  D +TYN+LI 
Sbjct: 323 AKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLID 382

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK G+   A  LV ++  N +  +  TY++LI   C   + ++A  L K +   G +P
Sbjct: 383 GLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQP 442

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           + + + +L+   C+      A +V  ++L K  + ++   + + +GL   G    A  L 
Sbjct: 443 SMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLL 502

Query: 532 RKMEIRGLLPKG 543
            KME  G++P  
Sbjct: 503 SKMENNGIIPDA 514



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 37/366 (10%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLL--DSERVDIALGFYKEMRRNRISPNVYTLNM 268
           N   +F +M      P I   NK L S++  ++     A+    ++    I+P + T N+
Sbjct: 40  NDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNI 99

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++ +C LG +  A  +F  +  +G+ P+  T+NTLI+G C  G L  A+ F + +   G
Sbjct: 100 LVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALG 159

Query: 329 IQPNVITFNTLIFGFCKKGK-----------------------------------LHEAN 353
              + +++ TLI G CK G+                                   + +A 
Sbjct: 160 FHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAY 219

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           +++SEM    +SP+VVT+N+LI G+  VG  +    L+ EM+   I  D+ T++ L+  L
Sbjct: 220 QLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDAL 279

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK+G   +A  ++  + K  ++P+  TYS+L+ G C+     +A  ++ +M R G  P+ 
Sbjct: 280 CKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHA 339

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           H + ++++   + +  D A  +  EM  K +APD++  + L  GL   G+   A +L  +
Sbjct: 340 HSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDE 399

Query: 534 MEIRGL 539
           M   G+
Sbjct: 400 MHNNGI 405



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 142/279 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L            A +    M   G +P + + +  +        V+ A   +  M 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  ++P+ ++ N++++   K+ +++ A+ +FK M   G  P   TYN+LI G C  G +S
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRIS 391

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M  NGI  +++T+N+LI   CK   + +A  +  ++K   + P++ TYN LI
Sbjct: 392 YAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILI 451

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +    +++++L  G  V+  TYN +I GLCKEG   +A  L+  ++ N ++
Sbjct: 452 DGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGII 511

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           P+A TY  +I     +  +E+A +L + MI  G    KH
Sbjct: 512 PDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLLCKH 550



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 172/354 (48%), Gaps = 6/354 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F++L   Y H  +   A   F ++   G+ P   + N  ++ +  + ++  AL F+  
Sbjct: 95  VTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDH 154

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       +  +   +++  CK+G    A+++ K +E       V  YN +I+  C    
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKA 214

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A +  + M    I P+V+TFN+LI GFC  G+L EA  +F EM   N++P+V T++ 
Sbjct: 215 VSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSI 274

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++   + GN     ++   M++ G+  D++TY++L+ G C   +  KA ++   + +  
Sbjct: 275 LVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLG 334

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+A +Y+ +I G    K  + A  L+K M   G  P+   +  L+   C+      A 
Sbjct: 335 VAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAW 394

Query: 494 EVLLEMLEKCMAPDSIILSELYSGL---HHCGKDELAMKLFRKMEIRGLLPKGF 544
           +++ EM    +  D +  + L   L   HH  K   A+ L +K++ +G+ P  +
Sbjct: 395 QLVDEMHNNGIPADILTYNSLIDVLCKNHHIDK---AIALVKKIKDQGIQPSMY 445



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 145/297 (48%), Gaps = 6/297 (2%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLG--IIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           +  M R R +P++   N ++ +  K        A+ +   +E  G  P++ T+N L++ +
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G ++ A      + K G  P  ITFNTLI G C  GKL EA      + A     + 
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+Y TLING  ++G +     + +++    +  D++ YN +I  LCK+     A  L  +
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+  T+++LI G CV    + AF L+  M+     P+ + F +L+   C++ +
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKG 543
             RA  +L  M+++ + PD +  S L  G  +C  +E+  A  +F  M   G+ P  
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDG--YCLVNEVNKAKHVFSTMSRLGVAPHA 339


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 174/381 (45%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FDLLF+ YA  K F  A + F  M   GF     SC  +L +L    +VD  L F++ M 
Sbjct: 158 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 217

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +   VY+L +V+   CK G +E   ++   + + G   +V TYN  I G+  +  L 
Sbjct: 218 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 277

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +   LMEK G+  NV+T+  LI GF   GK+ EA R+F EM+   +  +V  Y ++I
Sbjct: 278 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 337

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD------- 428
           +   + GN +    L++EM   G+     TY ALI G+CK G+ + A  LV +       
Sbjct: 338 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 397

Query: 429 ----------------------------LDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
                                       ++K  L  +   Y+++ +G C     + A  L
Sbjct: 398 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 457

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
             SM+  G  PN   F  L+  +C+  +F  A  V  EM EK   P+ I  + L  G   
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G  + A KL  ++E RGL+P
Sbjct: 518 RGNMKEAHKLKDELENRGLIP 538



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 162/326 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + LL   +++  K   A   F +MR+ G    +      +S    S  V  AL  + E
Sbjct: 296 VTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDE 355

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H  CK G +E A  +   M+  G   +   +NTLI G+C  G+
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 415

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++ + +MEK G++ +V  +N++  G CK  +  EA  +   M    VSPN +++ T
Sbjct: 416 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 475

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ Y + GN      ++ EM   G   +I+TYN LI G  K G  K+A  L  +L+   
Sbjct: 476 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  T ++LI G+C+    + A +L+  M + G  PN   +  ++S   ++   + A 
Sbjct: 536 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 595

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLH 519
           ++  EM E  + PD  + S L   LH
Sbjct: 596 KLYDEMKETGLTPDDTVYSSLVGSLH 621



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 182/385 (47%), Gaps = 12/385 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L G+      ++  KL D +  + +   ++ + ++   + Y  R       +    M  
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEV--AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 288

Query: 222 YGFLPIIESCNKFLSSLL-----DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            G      +CN    +LL     +  +++ A   ++EMR   I  +VY    ++   C+ 
Sbjct: 289 EGV-----ACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 343

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++RA+ +F  M   G IPS  TY  LI G C  G +  A    N M+  GI  N + F
Sbjct: 344 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 403

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTLI G+C+ G + EA R+   M+   +  +V  YN++ +G  ++   +    L   M+ 
Sbjct: 404 NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 463

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  + +++  LI   CKEG   +A  + +++++   VPN  TY+ LI G   R N + 
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 523

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L   +   G  P+ +    L+   C +   D A ++  EM ++ + P+ +  + + S
Sbjct: 524 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+ E A KL+ +M+  GL P
Sbjct: 584 GLSKDGRSEEAFKLYDEMKETGLTP 608



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 169/406 (41%), Gaps = 60/406 (14%)

Query: 198 LLFKTYAHRK--------KFRNATDTF-CQMRDYGF-LPIIESCNKFLSSLLDSERVDIA 247
           L+FK Y  RK        KF      F C   D G  +P+       ++SL+D       
Sbjct: 93  LIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT-----VIASLVDDA----- 142

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------------- 294
                E + NR        +++   +    +   A+E F++ME  GF             
Sbjct: 143 ---CNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLA 199

Query: 295 ------IPS--------------VTTYN--TLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
                 + S              VT Y+   ++ G C +G + +  K  + +   G++ N
Sbjct: 200 LRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKAN 259

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T+N  I G+ K+  L     I + M+   V+ NVVTY  LI+G+  +G  E    L+E
Sbjct: 260 VVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFE 319

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   GI+ D+  Y ++I   C+ G  K+A  L  ++    L+P+A TY ALI G C   
Sbjct: 320 EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAG 379

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A  L   M   G   N  IF  L+  +C++   D A  + + M +K +  D    +
Sbjct: 380 QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 439

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GFDKLRTINCAPEN 556
            + SGL    + + A  L   M  RG+ P    F  L  I C   N
Sbjct: 440 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 108/221 (48%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D +P++F+ L   Y        A      M   G    + + N   S L    R D A G
Sbjct: 397 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 456

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M    +SPN  +   ++  +CK G    A  VF+ ME  G +P++ TYN LI G+ 
Sbjct: 457 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 516

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +  A K K+ +E  G+ P+V T  +LI G C  GK+  A ++F EM    + PNVV
Sbjct: 517 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 576

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           TY  +I+G  + G SE    LY+EM   G+  D   Y++L+
Sbjct: 577 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 75/175 (42%)

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            +  M+   ++V + +   ++ GLCK G  +    L+ ++    +  N  TY+A I G  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 271

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R +     ++   M + G   N   + +L+  F      + A  +  EM EK +  D  
Sbjct: 272 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           + + + S     G  + A+ LF +M  +GL+P        I+   + G+ E+  +
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 386


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 214/484 (44%), Gaps = 67/484 (13%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA 204
           IV H++ +  + K    +L  +++ +       L + +  S+R  D + +V+D+L   Y+
Sbjct: 120 IVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYS 179

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE---------------------- 242
             +   +A     +M+       I + N  L +L  ++                      
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNP 239

Query: 243 ----------RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
                     R+  A+ F +E       P+V + N +M  FCK+G ++ A   F  M   
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P V +YN L+ G C  G +  A++F N ME +G++P+++T+N L  GF   G +  A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++   M    ++P++VTY  LI G+ Q+GN E    L E+ML  G+K+ I+TY  L+  
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G+  +A  L+ +++   L P+  TYS LI G C R   E A +LY+ M      PN
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPN 479

Query: 473 KHIFEMLMSTFCQNEDF-------------DRAAEVLL---------------------- 497
             +   ++S   +                 D A E++L                      
Sbjct: 480 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 539

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +++EK ++P  +  + L  G    GK   A+KL   +++ GL+P        +N   E G
Sbjct: 540 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 599

Query: 558 EKES 561
           +  S
Sbjct: 600 DMHS 603



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 41/344 (11%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM---- 289
            LSSL  S R+D A+    EM    + P++ T ++++H  CK G +E A+E+++ M    
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR 475

Query: 290 ----------------------ESMGFIPSVTT---------YNTLISGHCNKGLLSLAM 318
                                 E+  +  SVT          YN +I G+   G +  A+
Sbjct: 476 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 535

Query: 319 K-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           + +K ++EK GI P ++TFN+LI+GFCKKGKL EA ++   +K   + P  VTY TL+NG
Sbjct: 536 RSYKQIIEK-GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNG 594

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + G+      +  EM    IK   +TY  ++ GLCKEG+  ++  L+K +    L P+
Sbjct: 595 YCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPD 654

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ +I   C   + ++AFQL+  M++   +P+   + +L++  C   +   A  +L+
Sbjct: 655 QITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLV 714

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
            + ++ +    +  + +     HC K ++  A+  F +M  RG 
Sbjct: 715 TLQDQSIRLTKVAYTTIIKA--HCAKGDVQNALVFFHQMVERGF 756



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 173/385 (44%), Gaps = 35/385 (9%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L   +        A   FC M  YG LP + S N  L  L  +  ++ AL F 
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M  + + P++ T N++ + F  LG+I  A +V + M   G  P + TY  LI GHC  
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  + K K  M   G++ +++T+  L+   CK G++ EA  +  EM+   + P+++TY
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448

Query: 372 NTLINGYGQVGNSEMGASLYEEML-----------------------------------R 396
           + LI+G  + G  E    LYEEM                                    +
Sbjct: 449 SVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 508

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           + +  +I+ YN +I G  K G   +A    K + +  + P   T+++LI G C +     
Sbjct: 509 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 568

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L  ++   G  P    +  LM+ +C+  D     ++L EM  K + P  I  + +  
Sbjct: 569 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 628

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+   +++L + M  RGL P
Sbjct: 629 GLCKEGRLHESVQLLKYMYARGLFP 653



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 146/295 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  YK++    ISP + T N +++ FCK G +  AV++   ++  G +P+  TY TL++
Sbjct: 534 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 593

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G +       + ME   I+P  IT+  ++ G CK+G+LHE+ ++   M A  + P
Sbjct: 594 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 653

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TYNT+I  + +  + +    L+ +ML++ ++   +TYN LI GLC  G  K A  L+
Sbjct: 654 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 713

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L   S+      Y+ +I   C + + + A   +  M+  G   +   +  +++  C+ 
Sbjct: 714 VTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR 773

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A      ML   + PD  I   + +  H  G      ++F  M   GLLP
Sbjct: 774 NLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 2/346 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+ +  +       FDS+  S        ++++++   YA       A  ++ Q+ 
Sbjct: 485 AIISGLFEKGAISEAQMYFDSVTKSD--VAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 542

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +       ++  A+     ++ + + P   T   +M+ +C+ G + 
Sbjct: 543 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 602

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++   ME+    P+  TY  ++ G C +G L  +++    M   G+ P+ IT+NT+I
Sbjct: 603 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 662

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK   L +A ++ ++M   ++ P+ VTYN LING    GN +    L   +    I+
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 722

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +  + Y  +I   C +G  + A      + +     +   YSA+I   C R     A   
Sbjct: 723 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 782

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           +  M+  G  P++ I  ++++ F ++ D +   E+   M++  + P
Sbjct: 783 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 828


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 127/481 (26%), Positives = 207/481 (43%), Gaps = 52/481 (10%)

Query: 93  DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
           D K+L      +TPF++  +L  +  D   S+  F W  + K    T + + +++  L  
Sbjct: 56  DLKELRRSFNQITPFQLCKLL-LLPLDVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGA 114

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
            ++FK  + +L  I   +       LF  I+                 K Y        A
Sbjct: 115 AKEFKVIDKLLLQI-KEEGIAFRESLFICIM-----------------KYYGRANLPGQA 156

Query: 213 TDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           T     M+  Y   P  +S N  L  L+ +    +A   + EM    + P VYT  +VM 
Sbjct: 157 TRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMK 216

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A C +  ++ A  + ++M   G +P+   Y TLI     +  ++ A+K    M   G  P
Sbjct: 217 ALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLP 276

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN-------- 383
           +V TFN +I+G C+  ++HE  ++   M     +PN +TY  L+NG  +VG         
Sbjct: 277 DVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL 336

Query: 384 ------------------------SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                                    E  A LY++M++NG + D+ T+N LI GLCK+G  
Sbjct: 337 NKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLM 396

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  +V D+  N   PN  TY+ L+ G C +   E A  +   M   G   N   + +L
Sbjct: 397 GSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVL 456

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+N    +A ++L EM +K   PD    + L  GL    + E A+ L+R M + G+
Sbjct: 457 LRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGV 516

Query: 540 L 540
           +
Sbjct: 517 I 517



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 160/309 (51%), Gaps = 1/309 (0%)

Query: 234 FLSSLLDSERVDIALGF-YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            ++  + S R+D A  F Y +M +N   P+V+T N ++H  CK G++  AV++  +M + 
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P++ TY TL+ G C K  L  A    N M   G + N++ +N L+   CK GK+ +A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  EM      P++ T+NTLI G  +V   E   +LY +ML +G+  + +TYN LI  
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             + G  ++A  LV D+       +  TY+ LI   C    +E+A  L+  M+R    P+
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
                +L++  C+      A E+L +M+ + +APD +  + L +GL   G    A  LF 
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649

Query: 533 KMEIRGLLP 541
           K++  G+ P
Sbjct: 650 KLQAEGIQP 658



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 167/354 (47%), Gaps = 5/354 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +V+  L    + R +   A     +M   G LP +++ N  +  L    R+    
Sbjct: 239 CVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGA 298

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M     +PN  T  ++M+  C++G ++ A  +   + +    P+   +  LI+G+
Sbjct: 299 KLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGY 354

Query: 309 CNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
              G L  A  F  + M KNG +P+V TFNTLI G CKKG +  A  + ++M A   +PN
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           ++TY TL++G+ +    E    +  EM   G +++I+ YN L+  LCK GK  KA  ++ 
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++      P+  T++ LI G C     E A  LY+ M+  G   N   +  L+  F +  
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A +++ +ML +    D I  + L       G  E A+ LF +M  + L+P
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVP 588



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 150/328 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F+ L      +    +A D    M   G  P + +    L       +++ A 
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM       N+   N+++ A CK G + +A+++   M   G  P + T+NTLI G 
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C       A+     M  +G+  N +T+NTLI  F + G + EA ++ ++M       + 
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDE 555

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN LI  + ++G +E    L++EM+R  +    ++ N LI GLC+ GK   A  L++D
Sbjct: 556 ITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRD 615

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L P+  TY++LI G C   N   AF L+  +   G +P+   +  L+   C+   
Sbjct: 616 MIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGM 675

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYS 516
           FD A  +LL  +E    P+ +    L S
Sbjct: 676 FDDAYLLLLRGVENAFIPNDVTWYILVS 703



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 141/295 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L   +  + +   A     +M   GF   I   N  L +L  + +V  AL
Sbjct: 411 CTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKAL 470

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM      P+++T N ++   CK+   E A+ ++++M   G I +  TYNTLI   
Sbjct: 471 DMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAF 530

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +  A+K  N M   G   + IT+N LI  FCK G   +A  +F EM   ++ P+ 
Sbjct: 531 LRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSN 590

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++ N LING  +VG       L  +M+  G+  D++TYN+LI GLCK G  ++A  L   
Sbjct: 591 ISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNK 650

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L    + P+A TY+ LI   C     + A+ L    + +   PN   + +L+S F
Sbjct: 651 LQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 115/256 (44%), Gaps = 35/256 (13%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L +      K   A D   +M D G  P I + N  +  L   +R + AL  Y++M 
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512

Query: 256 RNRISPNVYTLNMVMHAF-----------------------------------CKLGIIE 280
            + +  N  T N ++HAF                                   CKLG  E
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATE 572

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +F  M     +PS  + N LI+G C  G +  A++    M   G+ P+V+T+N+LI
Sbjct: 573 KALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G + EA  +F++++A  + P+ +TYNTLI  + + G  +    L    + N   
Sbjct: 633 NGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFI 692

Query: 401 VDILTYNALILGLCKE 416
            + +T+  L+    KE
Sbjct: 693 PNDVTWYILVSNFIKE 708



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 77/144 (53%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           ALG + EM R  + P+  + N++++  C++G +  A+E+ ++M   G  P V TYN+LI+
Sbjct: 574 ALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLIN 633

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G +  A    N ++  GIQP+ IT+NTLI   C+ G   +A  +          P
Sbjct: 634 GLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIP 693

Query: 367 NVVTYNTLINGYGQVGNSEMGASL 390
           N VT+  L++ + +    E G S 
Sbjct: 694 NDVTWYILVSNFIKEIGKENGISF 717



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 2/186 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++   L   +     KL + +L+  R C    + ++ L K +        A   F +M 
Sbjct: 525 TLIHAFLRGGAIQEALKLVNDMLF--RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
               +P   SCN  ++ L    +V  AL   ++M    ++P+V T N +++  CK+G I 
Sbjct: 583 RKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIR 642

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F  +++ G  P   TYNTLI  HC  G+   A        +N   PN +T+  L+
Sbjct: 643 EAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702

Query: 341 FGFCKK 346
             F K+
Sbjct: 703 SNFIKE 708



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/137 (21%), Positives = 59/137 (43%)

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           +YN ++  L        AA +  ++    ++P   T+  ++   C+    + A  L + M
Sbjct: 175 SYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDM 234

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
            + GC PN  +++ L+    + +  + A ++L EM      PD    +++  GL    + 
Sbjct: 235 TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRI 294

Query: 525 ELAMKLFRKMEIRGLLP 541
               KL  +M  RG  P
Sbjct: 295 HEGAKLVDRMLFRGFTP 311


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 174/381 (45%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           FDLLF+ YA  K F  A + F  M   GF     SC  +L +L    +VD  L F++ M 
Sbjct: 162 FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMV 221

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +   VY+L +V+   CK G +E   ++   + + G   +V TYN  I G+  +  L 
Sbjct: 222 NLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLG 281

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +   LMEK G+  NV+T+  LI GF   GK+ EA R+F EM+   +  +V  Y ++I
Sbjct: 282 GVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSII 341

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD------- 428
           +   + GN +    L++EM   G+     TY ALI G+CK G+ + A  LV +       
Sbjct: 342 SCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGID 401

Query: 429 ----------------------------LDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
                                       ++K  L  +   Y+++ +G C     + A  L
Sbjct: 402 LNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGL 461

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
             SM+  G  PN   F  L+  +C+  +F  A  V  EM EK   P+ I  + L  G   
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G  + A KL  ++E RGL+P
Sbjct: 522 RGNMKEAHKLKDELENRGLIP 542



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 162/326 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + LL   +++  K   A   F +MR+ G    +      +S    S  V  AL  + E
Sbjct: 300 VTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDE 359

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +T   ++H  CK G +E A  +   M+  G   +   +NTLI G+C  G+
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGM 419

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++ + +MEK G++ +V  +N++  G CK  +  EA  +   M    VSPN +++ T
Sbjct: 420 VDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTT 479

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ Y + GN      ++ EM   G   +I+TYN LI G  K G  K+A  L  +L+   
Sbjct: 480 LIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  T ++LI G+C+    + A +L+  M + G  PN   +  ++S   ++   + A 
Sbjct: 540 LIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAF 599

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLH 519
           ++  EM E  + PD  + S L   LH
Sbjct: 600 KLYDEMKETGLTPDDTVYSSLVGSLH 625



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 182/385 (47%), Gaps = 12/385 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L G+      ++  KL D +  + +   ++ + ++   + Y  R       +    M  
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEV--AAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEK 292

Query: 222 YGFLPIIESCNKFLSSLL-----DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            G      +CN    +LL     +  +++ A   ++EMR   I  +VY    ++   C+ 
Sbjct: 293 EGV-----ACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRS 347

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++RA+ +F  M   G IPS  TY  LI G C  G +  A    N M+  GI  N + F
Sbjct: 348 GNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIF 407

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTLI G+C+ G + EA R+   M+   +  +V  YN++ +G  ++   +    L   M+ 
Sbjct: 408 NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 467

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  + +++  LI   CKEG   +A  + +++++   VPN  TY+ LI G   R N + 
Sbjct: 468 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 527

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L   +   G  P+ +    L+   C +   D A ++  EM ++ + P+ +  + + S
Sbjct: 528 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 587

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+ E A KL+ +M+  GL P
Sbjct: 588 GLSKDGRSEEAFKLYDEMKETGLTP 612



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 169/406 (41%), Gaps = 60/406 (14%)

Query: 198 LLFKTYAHRK--------KFRNATDTF-CQMRDYGF-LPIIESCNKFLSSLLDSERVDIA 247
           L+FK Y  RK        KF      F C   D G  +P+       ++SL+D       
Sbjct: 97  LIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVT-----VIASLVDDA----- 146

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------------- 294
                E + NR        +++   +    +   A+E F++ME  GF             
Sbjct: 147 ---CNESKCNRAKFKEKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLA 203

Query: 295 ------IPS--------------VTTYN--TLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
                 + S              VT Y+   ++ G C +G + +  K  + +   G++ N
Sbjct: 204 LRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKAN 263

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+T+N  I G+ K+  L     I + M+   V+ NVVTY  LI+G+  +G  E    L+E
Sbjct: 264 VVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFE 323

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   GI+ D+  Y ++I   C+ G  K+A  L  ++    L+P+A TY ALI G C   
Sbjct: 324 EMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAG 383

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A  L   M   G   N  IF  L+  +C++   D A  + + M +K +  D    +
Sbjct: 384 QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 443

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GFDKLRTINCAPEN 556
            + SGL    + + A  L   M  RG+ P    F  L  I C   N
Sbjct: 444 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 108/221 (48%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D +P++F+ L   Y        A      M   G    + + N   S L    R D A G
Sbjct: 401 DLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKG 460

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M    +SPN  +   ++  +CK G    A  VF+ ME  G +P++ TYN LI G+ 
Sbjct: 461 LLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYS 520

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G +  A K K+ +E  G+ P+V T  +LI G C  GK+  A ++F EM    + PNVV
Sbjct: 521 KRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVV 580

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           TY  +I+G  + G SE    LY+EM   G+  D   Y++L+
Sbjct: 581 TYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 75/175 (42%)

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            +  M+   ++V + +   ++ GLCK G  +    L+ ++    +  N  TY+A I G  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYF 275

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R +     ++   M + G   N   + +L+  F      + A  +  EM EK +  D  
Sbjct: 276 KRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           + + + S     G  + A+ LF +M  +GL+P        I+   + G+ E+  +
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQM 390


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 168/327 (51%), Gaps = 2/327 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F++L +      +  +A + F +M+  G    + S N  +S +  +  +D A   ++ M
Sbjct: 242 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 301

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++P+VYT   ++   C++G IE A  VF+ M   G  P+   +  LI  HC KG  
Sbjct: 302 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 361

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
              ++    M + G++P+ +T+N ++ G C+   L  A+ I  EM++  + P+ VTY TL
Sbjct: 362 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 421

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+GY +    +M   + + M+  G+ +D +TY ALI GL K G++  A  ++ ++ +  L
Sbjct: 422 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 481

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+ +TY+ +I   C + + +   +L K M   G +P    + ++M+ FC+      A  
Sbjct: 482 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM 541

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC 521
           +L  M+   ++PD I  + L  G  HC
Sbjct: 542 LLNAMINIGVSPDDITYNILLDG--HC 566



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 151/295 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  FY ++    + P     N++M    +LG +  A  VF  M+S G   +V ++NT+IS
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A      M + G+ P+V T+  LI G C+ G++ +A  +F +M    + P
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V +  LI+ + + G++E    L+ EM   G++ D +TYNA++ GLC+    K A+ +V
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    L P+  TY+ LI G C  +  + A ++ ++M+  G   ++  +  L+S   + 
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 463

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A  VL EM+E  + PD+   + +       G  +  ++L ++M+ +G  P
Sbjct: 464 GRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 518



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 147/326 (45%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + Q+ D G  P  +  N  +  L+    +  A   + EM+   +   V + N ++   C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++ A  + + M   G  P V TY  LI G C  G +  A      M   G++PN + 
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F  LI   CKKG       +  EM+   V P+ VTYN ++NG  +  + +  + +  EM 
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G++ D +TY  LI G CKE +   A  + +++    +  +  TY+ALI+G      S 
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++   M+ +G  P+   + M++  FC+  D      +L EM  K   P  +  + + 
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 527

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +G    G+ + A  L   M   G+ P
Sbjct: 528 NGFCKLGQMKNADMLLNAMINIGVSP 553



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 135/281 (48%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A   +  +   G  P    +N L+      G L+ A    + M+  G++  V++FNT+I 
Sbjct: 224 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 283

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+ G L  A  +   M    V+P+V TY  LI G  +VG  E    ++E+M   G+K 
Sbjct: 284 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 343

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + + +  LI   CK+G  +    L +++ +  + P+A TY+A++ G C  ++ + A  + 
Sbjct: 344 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 403

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M  +G RP+   +  L+  +C+ E+ D A E+   M+ + +  D +  + L SGL   
Sbjct: 404 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 463

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           G+   A ++  +M   GL P        I+     G+ ++G
Sbjct: 464 GRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 504



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 12/270 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF +L   +  +       +   +MR+ G  P   + N  ++ L  +  +  A G   E
Sbjct: 346 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 405

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+  T   ++  +CK   ++ A+E+ +NM + G      TY  LISG    G 
Sbjct: 406 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 465

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            + A +    M + G++P+  T+  +I  FC+KG +    R+  EM+     P VVTYN 
Sbjct: 466 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 525

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK-- 431
           ++NG+ ++G  +    L   M+  G+  D +TYN L+ G CK GK       V D+++  
Sbjct: 526 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK-------VTDIEELK 578

Query: 432 --NSLVPNASTYSALITGQCVRKNSERAFQ 459
                VP+   Y++++ G+ V+K + + + 
Sbjct: 579 SAKGTVPDLGVYTSIV-GEIVKKKTTKTYH 607



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 108/234 (46%), Gaps = 3/234 (1%)

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +  +GLL  A     L  + GI+    +   L+  F       EA   + ++    + P 
Sbjct: 183 YAEEGLLPDACTLVLLALRRGIRLEPTSCTGLMSRFPTA---PEACAFYLQLLDAGLPPE 239

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
              +N L+    ++G      ++++EM   G++  ++++N +I G+C+ G    A  L +
Sbjct: 240 AKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHR 299

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +  + P+  TY ALI G C     E A  +++ M   G +PN  +F +L+   C+  
Sbjct: 300 RMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKG 359

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D +   E+  EM E+ + PD++  + + +GL      + A  +  +M   GL P
Sbjct: 360 DAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRP 413


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 196/437 (44%), Gaps = 30/437 (6%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI------ 162
           V HVL  + K   L+   F W    +    T+ T++  L+ L K      +  I      
Sbjct: 7   VIHVLENI-KSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 163 -------------LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF 209
                        LRG+ D    D   +L   +    +M   +  + ++L        K 
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDM--ESKMLTPTTFIVNMLVSCLCKNGKV 123

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
             A + + ++ D   L  I S N     L  ++++D AL  + EM  N + P++ T N +
Sbjct: 124 DAAYELYKRLSDECSLDRI-SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182

Query: 270 MHAFCKLGIIERAVEVFKNM----ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           ++ +C+ G +E+A+ + + M    +    +P + +YNT+ISG C    L  A      M 
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMI 242

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           K+G  PNV+TFNTL+ G C  GKL EAN +F  M   N  P  VTY  LI G+ +    +
Sbjct: 243 KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRID 302

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                + +MLR G++ ++ TY ALI GLC   K + A  ++K +      PN  TY+ +I
Sbjct: 303 KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVI 362

Query: 446 TGQCVRKNSERAFQLYKSMIRS---GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
              C     ERA +L+   + S    C+P+ + +  ++   C+   F  A E  L M+E 
Sbjct: 363 GALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVES 422

Query: 503 CMAPDSIILSELYSGLH 519
            +     I   +  GL 
Sbjct: 423 KLVAKPHIYKAMADGLE 439



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 179/374 (47%), Gaps = 22/374 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP +   +FK  A ++ F +   T+               N +L++L+       A   +
Sbjct: 16  SPKLASRVFKWAARQEDFEHTVFTY---------------NAYLNALVKGGHGSKARKIF 60

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M      PN+YT  +V+   C     + A+E+ ++MES    P+    N L+S  C  
Sbjct: 61  DDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKN 120

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A + +K L ++  +  + I++N L +G CK  ++  A  +F EM+   V P+++T
Sbjct: 121 GKVDAAYELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLT 178

Query: 371 YNTLINGYGQVGNSEMGASLYEEML--RNGIKV--DILTYNALILGLCKEGKTKKAAYLV 426
           YN L+ GY + G  E   +L EEM+  + G  V  D+ +YN +I G CK  +   A Y++
Sbjct: 179 YNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVL 238

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + K+   PN  T++ L+ G C+    + A  +++ M+   C P    + +L++   + 
Sbjct: 239 RRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARA 298

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              D+A +  ++ML + + P+    + L  GL    K E A+++ ++M   G  P     
Sbjct: 299 LRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTY 358

Query: 547 LRTINCAPENGEKE 560
            R I    + G+ E
Sbjct: 359 TRVIGALCKGGQIE 372



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 21/263 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           +++ V+    K R+  ++  +LR ++ S                   C  + + F+ L  
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSG------------------CSPNVVTFNTLLD 258

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K   A   F  M +    P   +    ++    + R+D A  ++ +M R  + P
Sbjct: 259 GLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEP 318

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-F 320
           NVYT   ++   C    +E A+E+ K M S G  P+V TY  +I   C  G +  A K F
Sbjct: 319 NVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLF 378

Query: 321 KNLM--EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            + M       +P+   ++T+I+  C++ K  EA   F  M  + +      Y  + +G 
Sbjct: 379 NDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438

Query: 379 GQVGNSEMGASLYEEMLRNGIKV 401
             V  +E    +  E   +GI++
Sbjct: 439 ELVQETEKVERVCLEASAHGIEL 461


>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16420, mitochondrial; Flags: Precursor
 gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 535

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 214/467 (45%), Gaps = 54/467 (11%)

Query: 113 LLKVQKDYVLSLEFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDS 171
           ++  Q++  L+L+ F +  ++H   +   +T+  +L  L++ R F   ES++  + +S  
Sbjct: 55  MITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS-- 112

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
                       Y    C  + L  DLL + Y    ++ ++   F ++ D+G    + S 
Sbjct: 113 ------------YPPIKCGEN-LFIDLL-RNYGLAGRYESSMRIFLRIPDFGVKRSVRSL 158

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  L+ L+ ++R D+    +K  + +  I+PN++T N+++ A CK   IE A +V   + 
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           SMG +P++ TY T++ G+  +G +  A +    M   G  P+  T+  L+ G+CK G+  
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGY------GQVGN--SEM---------------- 386
           EA  +  +M+   + PN VTY  +I         G+  N   EM                
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338

Query: 387 -----------GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                         L+ +ML+N    D    + LI  LCKEG+  +A  L  + +K S +
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS-I 397

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI G C +     A +L+  M    C+PN   + +L+    +N +      V
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 457

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           L EMLE    P+      L+ GL   GK+E AMK+     + G + K
Sbjct: 458 LEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDK 504



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 136/288 (47%), Gaps = 2/288 (0%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVIT 335
           G  E ++ +F  +   G   SV + NTL++         L    FKN  E  GI PN+ T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            N L+   CKK  +  A ++  E+ +  + PN+VTY T++ GY   G+ E    + EEML
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G   D  TY  L+ G CK G+  +AA ++ D++KN + PN  TY  +I   C  K S 
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  ++  M+     P+  +   ++   C++   D A  +  +ML+    PD+ +LS L 
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             L   G+   A KLF + E +G +P        I    E GE    G
Sbjct: 374 HWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAG 420


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 169/325 (52%), Gaps = 2/325 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + GF P + + +  +S L  + +V  AL   +EM    ++P+V T  +++   C+ G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A E+F  M   G   +   YN LI+G C    +  A K    M   G +P+ IT+NT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++ G C+ GK+ EA + F  M +   SP+VV YN L++   + G       L++ M    
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 399 IKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            KV  D++TYN LI G C+  KT +A  L KD+     +P+  TY++++ G   + N + 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +++K M+ SGC PN   + +++S  C+  +  R  E+  EM EK  +PD ++ + +  
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
            L    K + A K+  +M   G +P
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKIGAVP 325



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 182/374 (48%), Gaps = 6/374 (1%)

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           D   +LF  ++   R C ++ + ++ L       +    A     +M   G+ P   + N
Sbjct: 62  DEADELFHKMIE--RGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYN 119

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME-- 290
             LS L    +V  A  F+  M     SP+V   N ++ A  K G +  A  +FK M+  
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                P + TYNTLI G C       AMK FK+++ K G  P+ +T+N+++ G  +K  +
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK-GYMPDTVTYNSILLGLARKSNM 238

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +F +M  +  +PN  TY+ +++G+ +VGN      LYEEM       D+L  NA+
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  LCK  K   A  +++++ K   VP+  TY+ L+ G C     ++A +L+ +M+ +GC
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   + ++++  C+      A  +   M+E+ + PD +  + L  GL   GK + A  
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKD 418

Query: 530 LFRKMEIRGLLPKG 543
           L   M    +LP G
Sbjct: 419 LLDVMSEHNVLPDG 432



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 171/336 (50%), Gaps = 2/336 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A +   +M + G  P + +    +  L  + +VD A   + +M     S N    N
Sbjct: 25  KVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYN 84

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++  CK   IERA ++ + M S G+ P   TYNT++SG C  G +S A +F + M   
Sbjct: 85  ALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 144

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSE 385
           G  P+V+ +N L+    K+GK+ EA  +F  M   +  V+P+++TYNTLI+G+ +V  ++
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L+++++  G   D +TYN+++LGL ++    +A  + K +  +   PN +TYS ++
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
           +G C   N  R  +LY+ M      P+  +   ++   C+ +  D A +VL EM +    
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           PD +  + L  GL      + A +LF  M   G  P
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP 360



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 184/386 (47%), Gaps = 4/386 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G    +  D   KLF  ++    M D+  + ++ +    A +     A + F +M 
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT--VTYNSILLGLARKSNMDEAEEMFKKMV 249

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   + +  LS       +   L  Y+EM   R SP+V   N V+   CK   ++
Sbjct: 250 DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVD 309

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +V + M  +G +P V TYN L+ G C   L+  A +  + M  NG  P++++++ ++
Sbjct: 310 DAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVL 369

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  K+H+A  +F  M    + P+VVT+N L++G  + G  +    L + M  + + 
Sbjct: 370 NGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVL 429

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D +T   L+ GLC++ +T +A  L + + +   V +   ++ ++ G C      +A   
Sbjct: 430 PDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLF 489

Query: 461 YKSMIRSGCR--PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +KSM++S     P+   +  L++   +    D+A +   +M     APD +  + L +GL
Sbjct: 490 FKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGL 549

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G+   A +L + M+ +G L   F
Sbjct: 550 RKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 180/380 (47%), Gaps = 4/380 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   ++ +   KL + +  + +  +   + ++ +        K   A   F  M 
Sbjct: 85  ALINGLCKDENIERAYKLLEEM--ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMP 142

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYK--EMRRNRISPNVYTLNMVMHAFCKLGI 278
             G+ P + + N  L +L    +V  A G +K  +M   +++P++ T N ++  FC++  
Sbjct: 143 SRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEK 202

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            + A+++FK++ + G++P   TYN+++ G   K  +  A +    M  +G  PN  T++ 
Sbjct: 203 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSI 262

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++ G C+ G +     ++ EM     SP+V+  N +I+   +    +    + EEM + G
Sbjct: 263 VLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIG 322

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++TYN L+ GLCK     KA  L   +  N   P+  +YS ++ G C       A 
Sbjct: 323 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 382

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+  MI     P+   F +LM   C+    D A ++L  M E  + PD +  + L  GL
Sbjct: 383 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGL 442

Query: 519 HHCGKDELAMKLFRKMEIRG 538
               + + A++LF+ M  +G
Sbjct: 443 CRDKRTDEAVRLFQYMVEKG 462



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 2/257 (0%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   GF P V TY+T+ISG C  G ++ A++    M + G+ P+V T+  ++   C+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EA+ +F +M     S N V YN LING  +  N E    L EEM   G + D +TYN 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           ++ GLC+ GK  +A      +      P+   Y+ L+           A+ L+K+M  + 
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 469 CR--PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            +  P+   +  L+  FC+ E  D A ++  +++ K   PD++  + +  GL      + 
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 527 AMKLFRKMEIRGLLPKG 543
           A ++F+KM   G  P G
Sbjct: 241 AEEMFKKMVDSGCAPNG 257


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 205/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P      T+S V+H L K R    +E+ LR +++     LP+   +++++Y
Sbjct: 242 FKEMVQRGIPPDFV--TYSSVVHALCKARAMDKAEAFLRQMVNKGV--LPNNWTYNNLIY 297

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR +  LP + + +  + SL    ++
Sbjct: 298 GY-----------------SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 340

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +PNV++  ++++ +   G +    ++F  M   G  P + T+N L
Sbjct: 341 KEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVL 400

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   Y+ LI G+   G+      L  E++ NG+ +DI+ ++++I  LCK G+   A  
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P A  YS L+ G C+    E+A +++ +M+ +G  PN  ++  L++ +
Sbjct: 521 IF-DLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML+K + P +I+ + +  GL   G+   A   F +M   G+
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 2/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + + +  +        V+ 
Sbjct: 178 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNK 237

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P+  T + V+HA CK   +++A    + M + G +P+  TYN LI 
Sbjct: 238 ACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIY 297

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M ++ I P+V+T + L+   CK GK+ EA  +F  M     +P
Sbjct: 298 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 357

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV +Y  ++NGY   G       L++ ML +GI  DI T+N LI      G   KA  + 
Sbjct: 358 NVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 417

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 418 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 477

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +A E++ E++   M  D +  S + + L   G+   A  +F      GL P
Sbjct: 478 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 532



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 165/346 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   YA +    + TD F  M   G  P I + N  + +  +   +D A+  + EMR
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+V T   V+ A C++G ++ A+E F  M   G  P    Y+ LI G C  G L 
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + +  NG+  +++ F+++I   CK G++ +A  IF       + P  V Y+ L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ + + Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   Y+ +I G      +  A   +  M  SG   NK  + +++    +N  FD A  +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFL 661

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  + I L+ + +G+    + E A  LF  +   GL+P
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 707



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 183/435 (42%), Gaps = 51/435 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++SI+L  L    K   ++ +LR + +  +   P    D + YS         V D  FK
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP----DVVAYS--------TVIDGFFK 231

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                     A D F +M   G  P   + +  + +L  +  +D A  F ++M    + P
Sbjct: 232 ----EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +T N +++ +   G  + AV VFK M     +P V T + L+   C  G +  A    
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G  PNV ++  ++ G+  KG L +   +F  M    ++P++ T+N LI  Y   
Sbjct: 348 DTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 407

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +    ++ EM  +G+K D++TY  +I  LC+ GK   A      +    + P+   Y
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 442 SALITGQCVRKNSERAFQL---------------YKSMIRSGCR---------------- 470
             LI G C   +  +A +L               + S+I + C+                
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 471 ----PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
               P   ++ MLM  +C     ++A  V   M+   + P+ ++   L +G    G+ + 
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 527 AMKLFRKMEIRGLLP 541
            + LFR+M  +G+ P
Sbjct: 588 GLSLFREMLQKGIKP 602



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 168/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+  + +M 
Sbjct: 397 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 456

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+ Y  + ++  FC  G + +A E+   + + G    +  ++++I+  C  G + 
Sbjct: 457 DQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 516

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    +L    G+ P  + ++ L+ G+C  GK+ +A R+F  M +  + PN V Y TL+
Sbjct: 517 DAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLV 576

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++G  + G SL+ EML+ GIK   + YN +I GL + G+T  A     ++ ++ + 
Sbjct: 577 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 636

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            N  TY+ ++ G    +  + A  L+K +     + N      +++   Q    + A ++
Sbjct: 637 MNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDL 696

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    + P  +  S + + L   G  E A  +F  M+  G  P
Sbjct: 697 FASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 170/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      + +  +++ C +       + R ++A
Sbjct: 83  CRSGPALAVALFNRAASRAQGPRVLSPT-----SHTYAILMDCCTR-------AHRPELA 130

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  N+   N ++  FC+    + A+++       +G +P V +Y+ L+ 
Sbjct: 131 LAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 190

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             C++G    A     +M + G    P+V+ ++T+I GF K+G +++A  +F EM    +
Sbjct: 191 SLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGI 250

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ VTY+++++   +    +   +   +M+  G+  +  TYN LI G    G+ K+A  
Sbjct: 251 PPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVR 310

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ ++S++P+  T S L+   C     + A  ++ +M   G  PN   + ++++ + 
Sbjct: 311 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYA 370

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +APD    + L     +CG  + AM +F +M   G+ P
Sbjct: 371 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ N+I  N L+ GFC+  +  EA + 
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     D++ Y+ +I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TYS+++   C  +  ++A    + M+  G  PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM    + PD + LS L   L   GK + A  +F 
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 349 TMAMKGQNPNVF 360



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 4/196 (2%)

Query: 353 NRIFSEMKATNV-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           NR  S  +   V SP   TY  L++   +    E+  + + ++LR G++V+I+  N L+ 
Sbjct: 95  NRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLK 154

Query: 412 GLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-- 468
           G C+  +T +A   L+    +   VP+  +YS L+   C +  S +A  L + M   G  
Sbjct: 155 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 214

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C P+   +  ++  F +  D ++A ++  EM+++ + PD +  S +   L      + A 
Sbjct: 215 CSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAE 274

Query: 529 KLFRKMEIRGLLPKGF 544
              R+M  +G+LP  +
Sbjct: 275 AFLRQMVNKGVLPNNW 290



 Score = 58.9 bits (141), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 86/192 (44%), Gaps = 10/192 (5%)

Query: 194 LVFDLLF---KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ D LF   +T   + KF   T++   M    +       N  L  L  +   D A+  
Sbjct: 609 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY-------NIVLRGLFKNRCFDEAIFL 661

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +KE+R   +  N+ TLN ++    +   +E A ++F ++   G +P V TY+ +I+    
Sbjct: 662 FKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +GL+  A    + M+  G +P+    N ++    KK ++  A    S++   N S   +T
Sbjct: 722 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 781

Query: 371 YNTLINGYGQVG 382
              L++ +   G
Sbjct: 782 TMLLVDLFSSKG 793



 Score = 39.3 bits (90), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 31/159 (19%), Positives = 70/159 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++ +     + F  A   F ++R       I + N  ++ +  + RV+ A   +  + 
Sbjct: 642 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASIS 701

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+ + P V T ++++    K G++E A ++F +M++ G  P     N ++     K  + 
Sbjct: 702 RSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIV 761

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            A  + + +++       +T   L+  F  KG   E  R
Sbjct: 762 RAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCREHIR 800


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 1/346 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  +   + KF  A +   QM + G +P + + N  ++       ++ A+   + M 
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             ++SPN  T N ++  +CK  +  +A+ V   M     +P V TYN+LI G C  G   
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  +LM   G+ P+  T+ ++I   CK  ++ EA  +F  ++   V+PNVV Y  LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY + G  +    + E+ML      + LT+NALI GLC +GK K+A  L + + K  L 
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P  ST + LI       + + A+  ++ M+ SG +P+ H +   + T+C+      A ++
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +M E  ++PD    S L  G    G+   A  + ++M   G  P
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 137/478 (28%), Positives = 213/478 (44%), Gaps = 31/478 (6%)

Query: 69  RTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLEF 126
           R LPE +   +   +   S L   +W K  +L + ++     HV  L  +  D   +L F
Sbjct: 50  RNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNF 109

Query: 127 FTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
             W+  +     ++ +++ +L +L  N           G++           F   L   
Sbjct: 110 SHWISQNPRYKHSVYSYASLLTLLINNGYV--------GVV-----------FKIRLLMI 150

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + CDS   V D L+     RK   N  + F    +  +  II   N  L+SL     VD 
Sbjct: 151 KSCDS---VGDALYVLDLCRK--MNKDERF----ELKYKLIIGCYNTLLNSLARFGLVDE 201

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               Y EM  +++ PN+YT N +++ +CKLG +E A +    +   G  P   TY +LI 
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +  L  A K  N M   G + N + +  LI G C   ++ EA  +F +MK     P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            V TY  LI             +L +EM   GIK +I TY  LI  LC + K +KA  L+
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L+PN  TY+ALI G C R   E A  + + M      PN   +  L+  +C++
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  +A  VL +MLE+ + PD +  + L  G    G  + A +L   M  RGL+P  +
Sbjct: 442 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 166/359 (46%), Gaps = 21/359 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L K Y  +     A     +M +   LP + + N  +     S   D A      M 
Sbjct: 431 YNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ +T   ++ + CK   +E A ++F ++E  G  P+V  Y  LI G+C  G + 
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 316 LA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A +  + ++ KN + PN +TFN LI G C  GKL EA  +  +M    + P V T   L
Sbjct: 550 EAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   + G+ +   S +++ML +G K D  TY   I   C+EG+   A  ++  + +N +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE------- 487
            P+  TYS+LI G      +  AF + K M  +GC P++H F  L+    + +       
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728

Query: 488 -----------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
                      +FD   E+L +M+E  + P++    +L  G+   G   +A K+F  M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 37/328 (11%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ T +I++H L K+  F  + S  + +L S +                        +  
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT------------------KPDAHTYTT 642

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
             +TY    +  +A D   +MR+ G  P + + +  +    D  + + A    K MR   
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702

Query: 259 ISPNVYT-LNMVMH-----------------AFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             P+ +T L+++ H                 A   +   +  VE+ + M      P+  +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           Y  LI G C  G L +A K  + M++N GI P+ + FN L+   CK  K +EA ++  +M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P + +   LI G  + G  E G S+++ +L+ G   D L +  +I G+ K+G  
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITG 447
           +    L   ++KN    ++ TYS LI G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 19/299 (6%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + L F+ L        K + AT    +M   G  P + +    +  LL     D A 
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +++M  +   P+ +T    +  +C+ G +  A ++   M   G  P + TY++LI G+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI-------FG--------FCKKGKLHEAN 353
            + G  + A      M   G +P+  TF +LI       +G         C    + E +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742

Query: 354 RI---FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNAL 409
            +     +M   +V+PN  +Y  LI G  +VGN  +   +++ M RN GI    L +NAL
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +   CK  K  +AA +V D+     +P   +   LI G   +   ER   +++++++ G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 203/427 (47%), Gaps = 6/427 (1%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-SDSFDLPSKLFDS 181
           +L FF W+        T ++H+ +LH+L++ R     E ++  +L+ SD+ +      D+
Sbjct: 73  ALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPAQYERLVVSMLNCSDTAEDMRVSADA 132

Query: 182 ILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           I    R   +    SP  ++   ++ A           + Q+   G LP   + N  + S
Sbjct: 133 IQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKS 192

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                 +  A   ++ +    + P  +T N ++  +C+ G + +A  +F  M  MG   +
Sbjct: 193 YCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRN 252

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             +Y  LI G C    +  A+    +M+++G  PNV  F  LI G CK G++ +A  +F 
Sbjct: 253 EYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFD 312

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M    V P+V+TYN +I GY ++G       + E M +NG   D  TYN LI GLC + 
Sbjct: 313 AMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ- 371

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           KT++A  L+ +  K    P   T++ LI G C+ +  + A ++   M+ S C+ +  +F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+++  + +    A E+L E+    + P+ I  + +  G    GK ++A+++ + ME  
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 538 GLLPKGF 544
           G  P  +
Sbjct: 492 GCQPNAW 498



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 183/391 (46%), Gaps = 39/391 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   + +L +     K  R A   F  M+  G  P + +    +S L  S RV  A 
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M +N + P+V T N ++  + KLG +  A+++ + ME  G  P   TYNTLI G 
Sbjct: 309 LLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC------------------------ 344
           C++     A +  N   K G  P V+TF  LI G+C                        
Sbjct: 369 CDQKTEE-AEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 345 -----------KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
                      KK +L EA  + +E+ A  + PNV+TY ++I+GY + G  ++   + + 
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M R+G + +  TYN+L+ GL K+ K  KA  L+  + K+ ++PN  TY+ L+ GQC   +
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + AF+L++ M ++G +P++H + +L    C+     RA E    ++ K +A   +  + 
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALTKVYYTT 604

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L  G    G  + A  L  +M   G  P  +
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSY 635



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 182/374 (48%), Gaps = 5/374 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   ++ FD   ++ + ++ S   C     VF  L  +   + + + A +   ++ 
Sbjct: 397 NLINGYCMAEKFDDALRMKNKMMSS--KCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 454

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    +     S +VDIAL   K M R+   PN +T N +M+   K   + 
Sbjct: 455 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 514

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +   M+  G IP+V TY TL+ G C++     A +   +ME+NG++P+   +  L 
Sbjct: 515 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 574

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G+  EA   +S +    V+   V Y TLI+G+ + GN++  A+L E M+  G  
Sbjct: 575 DALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 631

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY+ L+  LCK+ +  +A  ++  +    +      Y+ LI         + A ++
Sbjct: 632 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 691

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y  M  SG +P+   + + ++++C+    + A +++L+M  + +APD +  + L  G  H
Sbjct: 692 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 751

Query: 521 CGKDELAMKLFRKM 534
            G  + A    ++M
Sbjct: 752 MGYIDRAFSTLKRM 765



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 146/336 (43%), Gaps = 16/336 (4%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D G  P   + +  L +L   +R++ AL    +M    I   ++   +++    + G
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREG 683

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A  ++  M S G  PS TTY   I+ +C +G L  A      ME+ G+ P+V+T+N
Sbjct: 684 KHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYN 743

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI----------------NGYGQV 381
            LI G    G +  A      M   +  PN  TY  L+                +G   +
Sbjct: 744 ILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNL 803

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              ++   L E M+++G+   + TY++LI G CK G+ ++A  L+  +    L PN   Y
Sbjct: 804 IELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIY 863

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI   C  K  E+A      M   G +P    + +L+   C   DF++   +  ++LE
Sbjct: 864 TLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLE 923

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
                D +    L  GL   G  ++  ++   ME R
Sbjct: 924 LGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 959



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 21/397 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G   S   D+  ++    +     C  +   ++ L       KK   A     +M+
Sbjct: 467 SIIDGYCKSGKVDIALEVLK--MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    L    D    D A   ++ M +N + P+ +   ++  A CK G   
Sbjct: 525 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 581

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA E +  +   G   +   Y TLI G    G    A      M   G  P+  T++ L+
Sbjct: 582 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 641

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK+ +L+EA  I  +M    +   +  Y  LI+   + G  +    +Y EM  +G K
Sbjct: 642 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 701

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TY   I   CKEG+ + A  L+  +++  + P+  TY+ LI G       +RAF  
Sbjct: 702 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 761

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE----------------DFDRAAEVLLEMLEKCM 504
            K M+ + C PN   + +L+    +                  + D   ++L  M++  +
Sbjct: 762 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 821

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P     S L +G    G+ E A  L   M  +GL P
Sbjct: 822 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 858



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 51/292 (17%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      + +L      +K+   A     QM   G    I +    +  +L   + D A 
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG- 307
             Y EM  +   P+  T  + ++++CK G +E A ++   ME  G  P V TYN LI G 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 308 ---------------------------------HCNKG---------------LLSLAMK 319
                                            H  KG               L+ L + 
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 809

Query: 320 FKNL--MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ L  M K+G+ P V T+++LI GFCK G+L EA  +   M    +SPN   Y  LI  
Sbjct: 810 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 869

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                  E   S    M   G +  + +Y  L++GLC EG  +K   L  DL
Sbjct: 870 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 921



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 38/342 (11%)

Query: 142 THSIVLHILTKNRKFKSSESIL-----RGI--------------LDSDSFDLPSKLFDSI 182
           T+S++LH L K ++   +  IL     RGI              L     D   ++++ +
Sbjct: 636 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
             S      S   + +   +Y    +  +A D   +M   G  P + + N  +       
Sbjct: 696 TSSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK--------------LGIIERAV--EVF 286
            +D A    K M      PN +T  +++    K                +IE  +  ++ 
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M   G  P+VTTY++LI+G C  G L  A    + M   G+ PN   +  LI   C  
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
               +A    S M      P + +Y  L+ G    G+ E   SL+ ++L  G   D + +
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
             L  GL K G       ++  ++K     ++ TY AL+T +
Sbjct: 934 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY-ALVTNK 974


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 170/320 (53%), Gaps = 1/320 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           MR Y  +P + + N  +  L        A+ + + M      P+ +T N ++  +CK+ +
Sbjct: 250 MRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 308

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A E+ K+    GF+P   TY +LI+G C +G +  A++  N  +  GI+P+++ +N+
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G C +G +  A ++ +EM      P++ TYN +ING  ++GN      +  + +  G
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 428

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D+ T+N LI G CK  K   A  LV+ + +  + P+  TY++++ G C         
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + ++ MI  GC PN   + +L+  FC++   + A++V+++M ++ + PD++  + L  G 
Sbjct: 489 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 548

Query: 519 HHCGKDELAMKLFRKMEIRG 538
              G  E A  LF+K+E +G
Sbjct: 549 CRNGDLEGAYLLFQKLEEKG 568



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 164/336 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F + +  G  P I   N  +  L     +  AL    EM      P++ T N+V++
Sbjct: 347 ALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 406

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G I  A  V  +    G++P V T+NTLI G+C +  L  A++    M + GI P
Sbjct: 407 GLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAP 466

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + IT+N+++ G CK GK++E N  F EM      PN +TYN LI  + +    E  + + 
Sbjct: 467 DTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVI 526

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M + G+  D +++N LI G C+ G  + A  L + L++      A T++ LI     +
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGK 586

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N   A +++  M+  G R + + + +L+   C+  + DRA   L+EM++K   P     
Sbjct: 587 LNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 646

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
             + + L    +   A+ +   M   G++P+  D +
Sbjct: 647 GRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTI 682



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 170/376 (45%), Gaps = 4/376 (1%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKT----YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +++ Y  RM +   L  D  + T    Y      + AT+        GF+P   +    +
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLI 335

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L     V+ AL  + E +   I P++   N ++   C  G+I  A++V   M   G  
Sbjct: 336 NGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCH 395

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + TYN +I+G C  G +S A    N     G  P+V TFNTLI G+CK+ KL  A ++
Sbjct: 396 PDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQL 455

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              M    ++P+ +TYN+++NG  + G        ++EM+  G   + +TYN LI   C+
Sbjct: 456 VERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCR 515

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             K ++A+ ++  + +  L P+A +++ LI G C   + E A+ L++ +   G       
Sbjct: 516 SNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADT 575

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F  L+  F    +   A ++  EML K    DS     L  G       + A     +M 
Sbjct: 576 FNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMI 635

Query: 536 IRGLLPKGFDKLRTIN 551
            +G +P      R IN
Sbjct: 636 KKGFIPSMSTFGRVIN 651



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 174/376 (46%), Gaps = 3/376 (0%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +RG+ ++       +L D  + +Y + D   + ++ L +    +   + A     +M + 
Sbjct: 231 IRGLCEAGRLPEAVRLVDG-MRAYAVPDV--VTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G LP   + N  +        V  A    K+       P+  T   +++  C  G +ERA
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E+F   ++ G  P +  YN+L+ G C +GL+  A++  N M + G  P++ T+N +I G
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G + +A  + ++       P+V T+NTLI+GY +    +    L E M   GI  D
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPD 467

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            +TYN+++ GLCK GK  +     +++      PN  TY+ LI   C     E A ++  
Sbjct: 468 TITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIV 527

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G  P+   F  L+  FC+N D + A  +  ++ EK  +  +   + L        
Sbjct: 528 KMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKL 587

Query: 523 KDELAMKLFRKMEIRG 538
              +A K+F +M  +G
Sbjct: 588 NMHMAEKIFDEMLSKG 603



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 164/377 (43%), Gaps = 34/377 (9%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + YA   + R+A D F +M  +   P   + N  + +L+D+   D A   Y  M    +
Sbjct: 60  IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119

Query: 260 SPNVYTLNMVMHAFC-------------------------------KLGIIERAVEVFKN 288
           SP+++T  + + +FC                                 G    A ++F  
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQ 179

Query: 289 MESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           M      P++  +N ++   C +G +L   +    ++++ G+  N+ T+N  I G C+ G
Sbjct: 180 MLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQR-GMSINLFTYNIWIRGLCEAG 238

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           +L EA R+   M+A  V P+VVTYNTLI G  +    +        M+  G   D  TYN
Sbjct: 239 RLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYN 297

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I G CK    ++A  L+KD      VP+  TY +LI G C   + ERA +L+      
Sbjct: 298 TIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAK 357

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+  ++  L+   C       A +V+ EM E+   PD    + + +GL   G    A
Sbjct: 358 GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDA 417

Query: 528 MKLFRKMEIRGLLPKGF 544
             +     ++G LP  F
Sbjct: 418 TVVMNDAIMKGYLPDVF 434



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y  R K  +A     +M +YG  P   + N  L+ L  + +V+     ++EM 
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N+++  FC+   +E A +V   M   G  P   ++NTLI G C  G L 
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      +E+ G      TFNTLI  F  K  +H A +IF EM +     +  TY  LI
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +  N +       EM++ G    + T+  +I  L    +  +A  ++  + K  +V
Sbjct: 616 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 675

Query: 436 P 436
           P
Sbjct: 676 P 676



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 108/263 (41%), Gaps = 11/263 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G+  +   +  ++ F  ++   + C  +P+ +++L + +    K   A+    +M 
Sbjct: 473 SVLNGLCKAGKVNEVNETFQEMIL--KGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   S N  +     +  ++ A   ++++     S    T N ++ AF     + 
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F  M S G      TY  LI G C    +  A      M K G  P++ TF  +I
Sbjct: 591 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVI 650

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
                  ++ +A  I   M    V P VV  +T++N        E+ A   L E++++ G
Sbjct: 651 NSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA----DKKEIAAPKILVEDLMKKG 704

Query: 399 IKVDILTYNALILGLCKEGKTKK 421
             +   TY  L  G+     T+K
Sbjct: 705 -HISYPTYEVLHEGVRDNKLTRK 726


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 196/437 (44%), Gaps = 30/437 (6%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI------ 162
           V HVL  + K   L+   F W    +    T+ T++  L+ L K      +  I      
Sbjct: 7   VIHVLENI-KSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 163 -------------LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF 209
                        LRG+ D    D   +L   +    +M   +  + ++L        K 
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDM--ESKMLTPTTFIVNMLVSCLCKNGKV 123

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
             A + + ++ D   L  I S N     L  ++++D AL  + EM  N + P++ T N +
Sbjct: 124 DAAYELYKRLSDECSLDRI-SYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182

Query: 270 MHAFCKLGIIERAVEVFKNM----ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           ++ +C+ G +E+A+ + + M    +    +P + +YNT+ISG C    L  A      M 
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMI 242

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           K+G  PNV+TFNTL+ G C  GKL EAN +F  M   N  P  VTY  LI G+ +    +
Sbjct: 243 KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRID 302

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                + +MLR G++ ++ TY ALI GLC   K + A  ++K +      PN  TY+ +I
Sbjct: 303 KANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVI 362

Query: 446 TGQCVRKNSERAFQLYKSMIRS---GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
              C     ERA +L+   + S    C+P+ + +  ++   C+   F  A E  L M+E 
Sbjct: 363 GALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVES 422

Query: 503 CMAPDSIILSELYSGLH 519
            +     I   +  GL 
Sbjct: 423 KLVAKPHIYKAMADGLE 439



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 180/374 (48%), Gaps = 22/374 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP +   +FK  A ++ F++   T+               N +L++L+       A   +
Sbjct: 16  SPKLASRVFKWAARQEDFQHTVFTY---------------NAYLNALVKGGHGSKARKIF 60

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M      PN+YT  +V+   C     + A+E+ ++MES    P+    N L+S  C  
Sbjct: 61  DDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKN 120

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A + +K L ++  +  + I++N L +G CK  ++  A  +F EM+   V P+++T
Sbjct: 121 GKVDAAYELYKRLSDECSL--DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLT 178

Query: 371 YNTLINGYGQVGNSEMGASLYEEML--RNGIKV--DILTYNALILGLCKEGKTKKAAYLV 426
           YN L+ GY + G  E   +L EEM+  + G  V  D+ +YN +I G CK  +   A Y++
Sbjct: 179 YNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVL 238

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + K+   PN  T++ L+ G C+    + A  +++ M+   C P    + +L++   + 
Sbjct: 239 RRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARA 298

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              D+A +  ++ML + + P+    + L  GL    K E A+++ ++M   G  P     
Sbjct: 299 LRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTY 358

Query: 547 LRTINCAPENGEKE 560
            R I    + G+ E
Sbjct: 359 TRVIGALCKGGQIE 372


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 175/363 (48%), Gaps = 43/363 (11%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER------VDIALG 249
           F+++        + R A D    MR +G +P + + N  +       R      VD+ L 
Sbjct: 191 FNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLL- 249

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             KEM +  ISPNV T N++++ +CK   I  A++VF+ M   G   ++ TY +L+SG C
Sbjct: 250 --KEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLC 307

Query: 310 NKGLLSLAMKFKNLME----------------------------------KNGIQPNVIT 335
            +G +  +MK    ME                                  + G++PNV+T
Sbjct: 308 REGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVT 367

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTLI G+ + GK+ EA      M    +SP+V TYN LI G+    +    + L +EM 
Sbjct: 368 YNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMK 427

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+K D++TYN LI  LC +G+ +KA  L+ ++ +  L P   TY+A+I G C + +++
Sbjct: 428 ETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAK 487

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  +   M +   R N     + +  FC+    D A  VL EMLEK + P+ I    + 
Sbjct: 488 GAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIIN 547

Query: 516 SGL 518
           SG+
Sbjct: 548 SGM 550



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/428 (31%), Positives = 204/428 (47%), Gaps = 33/428 (7%)

Query: 143 HSIV---LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           HS++   LH L   R   S  SILR         LP+              S PLV D+L
Sbjct: 85  HSLLRSELHALAAGR-LHSPASILRA--------LPA-------------SSRPLVADML 122

Query: 200 FKTYAHRKKFRNATDTFC-QMRDYG-FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
               A   +   A   F     DY  + P   S N  L++L+ ++RVD+A   ++   R 
Sbjct: 123 VLALARASQPLAAYGAFLLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAALRR 182

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG----L 313
           R+SP+ +T N+V+   CK G + +A +V K+M   G +PSV TYNTLI G+   G    +
Sbjct: 183 RVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKM 242

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             + M  K  M + GI PNV+TFN LI G+CK+  +  A ++F EM+   +  N+VTY +
Sbjct: 243 YHVDMLLKE-MNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTS 301

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  + G  E    L EEM   G+   + T N+++ G CK+G   +A   V  + +  
Sbjct: 302 LVSGLCREGKVEDSMKLVEEMEELGLAT-LPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG 360

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ LI G       + A     +M   G  P+   +  L++ F  + D+   +
Sbjct: 361 MKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVS 420

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            +L EM E  +  D +  + L   L   G+   A+KL  +M   GL PK       IN  
Sbjct: 421 GLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480

Query: 554 PENGEKES 561
            E G+ + 
Sbjct: 481 CEKGDAKG 488



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 88/184 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y    K + AT     M   G  P +++ N  ++    S       G   E
Sbjct: 366 VTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDE 425

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   +  ++ T N+++ A C  G + +AV++   M  +G  P   TYN +I+G C KG 
Sbjct: 426 MKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGD 485

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A   +  MEK   + NV+T N  +  FCK GK+ EAN + +EM    + PN +TY  
Sbjct: 486 AKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEI 545

Query: 374 LING 377
           + +G
Sbjct: 546 INSG 549



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 36/250 (14%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G L  + + N  L+       +  A G+   M +  + PNV T N ++  + +LG
Sbjct: 321 EMEELG-LATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLG 379

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGH----------------------------- 308
            ++ A      M   G  P V TYN LI+G                              
Sbjct: 380 KMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYN 439

Query: 309 ------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                 C KG +  A+K  + M + G++P   T+N +I GFC+KG    A+ I   M+  
Sbjct: 440 VLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKC 499

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
               NVVT N  +  + ++G  +    +  EML  G+  + +TY  +  G+ ++G     
Sbjct: 500 KKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDI 559

Query: 423 AYLVKDLDKN 432
                D+ KN
Sbjct: 560 RGYAADVSKN 569


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 174/374 (46%), Gaps = 35/374 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   Y    K ++A D   +M ++G +P   S N  L +LL    +  A     +M+
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +SPN +T NM++  +C+LG+++ A +V + M     +P+V TYN L++G CN G + 
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFG--------------------------------- 342
            A + ++ MEK  + P+V+T+NTLI G                                 
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 343 --FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CKKG + EA     +M+   +SP+ VTYNTLI  Y + G       + +EM   G+K
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D  T N ++  LC E K  +A  L+    K   + +  +Y  LI G    +  +RA  L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M      P+   +  ++   CQ+   D+A + L EMLE  + PD    + +  G   
Sbjct: 516 WDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCL 575

Query: 521 CGKDELAMKLFRKM 534
            G  E A +   +M
Sbjct: 576 EGNVEKAFQFHNEM 589



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 6/352 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL---SSLLDSERVDIALGFYK 252
           +++L   + +  K   A     +M     LP + + N  +   S   DS  V       +
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEV---YSLIE 377

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM +  +  N  T N+++   CK G +  A      ME  G  P   TYNTLI  +C  G
Sbjct: 378 EMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAG 437

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A +  + M   G++ +  T NT++   C + KL EA  +           + V+Y 
Sbjct: 438 KMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYG 497

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI GY +    +   +L++EM    I    +TYN++I GLC+  K  +A   + ++ +N
Sbjct: 498 ILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLEN 557

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            LVP+ +TY+ +I G C+  N E+AFQ +  MI +  +P+ +   +L+   C+    ++A
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKA 617

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            ++   ++ K    D +  + + S L   GK E A  L  +ME + L P  +
Sbjct: 618 LKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQY 669



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 145/317 (45%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + ++++ K    +     AT T  +M + G  P   + N  + +   + ++  A    
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    +  + +TLN ++H  C    ++ A  +  +    G+I    +Y  LI G+   
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
                A+   + M++  I P+ IT+N++I G C+  K+ +A    +EM    + P+  TY
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I+G+   GN E     + EM+ N  K D+ T N L+ GLC+EG  +KA  L   L  
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVS 626

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
                +  TY+ +I+  C     E A+ L   M      P+++ ++++++          
Sbjct: 627 KGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKE 686

Query: 492 AAEVLLEMLEKCMAPDS 508
           A E  L+M+E  +  D 
Sbjct: 687 AEEFTLKMVESGIVHDQ 703



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 134/298 (44%), Gaps = 23/298 (7%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            KK   A +  C     G++    S    +      E+ D AL  + EM+  +I P+  T
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N V+   C+   +++A++    M   G +P  TTYN +I G C +G +  A +F N M 
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N  +P+V T N L+ G C++G L +A ++F+ + +     +VVTYNT+I+   + G  E
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA---------AYLVKDLD------ 430
               L  EM    +  D  TY  +I  L   G+ K+A         + +V D +      
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKG 710

Query: 431 KNSLVPNAS--------TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +N L    S         YS  I   C +   + A  L+  + + G   NK+ +  LM
Sbjct: 711 QNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLM 768



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 35/343 (10%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESIL-----RG-ILDSDSF------------- 172
           T K   +   T + +LH L   +K   + ++L     RG ILD  S+             
Sbjct: 450 TSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKG 509

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           D    L+D +    R    S + ++ +       +K   A D   +M + G +P   + N
Sbjct: 510 DRALNLWDEM--KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +        V+ A  F+ EM  N   P+VYT N+++   C+ G++E+A+++F  + S 
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK 627

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G    V TYNT+IS  C +G    A      ME   + P+  T+  +I      G++ EA
Sbjct: 628 GKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEA 687

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQ-VGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
                +M    V   +V    L  G GQ V  SE+                 + Y+  I 
Sbjct: 688 EEFTLKM----VESGIVHDQNLKLGKGQNVLTSEVSEHF---------DFKSIAYSDQIN 734

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            LC + K K A +L  ++ K  +  N  TY  L+ G   R+ S
Sbjct: 735 ELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKS 777


>gi|297805650|ref|XP_002870709.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316545|gb|EFH46968.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 608

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/511 (26%), Positives = 222/511 (43%), Gaps = 50/511 (9%)

Query: 53  SENSMKMNRNPIPIP-----HRTLPEPKGQDLDFVNIAYSHLIHSDWK--------KLTA 99
           S +S+    N IP P     +  LP+ +  +   V++  S L H D          ++ +
Sbjct: 12  SSSSIVPRCNNIPKPILNPLYNLLPQTQNPN-KIVDVICSTLNHRDHSVLLPNLRDEVKS 70

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           L  HL    +  VLL+ Q D   +L FF WV+        +  + ++LHIL  ++KF  +
Sbjct: 71  LIPHLGYPEISRVLLRFQSDASRALTFFKWVKFDLGKRPNVGNYCLLLHILASSKKFPLA 130

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
              L  +++  S      +F  ++ +   C+  P+VFD+L K Y       +   TF ++
Sbjct: 131 MQFLCELIELTSKKEEEDVFSVLVSASDECNWDPVVFDMLVKGYLKLGLVEDGFSTFRKV 190

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D GF   + +CN  L+ LL  + ++     Y  M R  I PN YT N++ + FC     
Sbjct: 191 IDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVYNVMCRVGIHPNTYTFNILTNVFCNNSNY 250

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
               +  + ME  GF P + TYNTL+S +C +G L  A     +M +  + P+++T+ +L
Sbjct: 251 GEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSL 310

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK G++ EA++ F  M    + P+ ++YNTLI  Y + G  +    L  EML N +
Sbjct: 311 IKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV 370

Query: 400 KVDILTYNALILG-----------------------------------LCKEGKTKKAAY 424
             D  T   ++ G                                   LC+EGK   A +
Sbjct: 371 VPDRFTCKVIVEGFVREGRLLAAVNFVVELRRLKVIIPIEVCDFLIKSLCQEGKPFAAKH 430

Query: 425 LVKDLDK-NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L++ + K         TY+ LI   C     E A  L   +       +   +  L+   
Sbjct: 431 LLERISKEEGHEAKPETYNNLIESLCCCDAIEEALVLKGKLKNQNQVLDVKTYRALIGCL 490

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           C+      A  ++ EML+  + PDSII   L
Sbjct: 491 CRIGRNREAESLMAEMLDSEVKPDSIICGAL 521



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 128/313 (40%), Gaps = 13/313 (4%)

Query: 183 LYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
            Y Y++     +V DL     L K      + R A  TF +M D G  P   S N  + +
Sbjct: 289 FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYA 348

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                 +  +     EM  N + P+ +T  +++  F + G +  AV     +  +  I  
Sbjct: 349 YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLAAVNFVVELRRLKVIIP 408

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEK----NGIQPNVITFNTLIFGFCKKGKLHEAN 353
           +   + LI   C +G    A   K+L+E+     G +    T+N LI   C    + EA 
Sbjct: 409 IEVCDFLIKSLCQEGKPFAA---KHLLERISKEEGHEAKPETYNNLIESLCCCDAIEEAL 465

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  ++K  N   +V TY  LI    ++G +    SL  EML + +K D +   AL+   
Sbjct: 466 VLKGKLKNQNQVLDVKTYRALIGCLCRIGRNREAESLMAEMLDSEVKPDSIICGALVNRY 525

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC-VRKNSERAFQLYKSMIRSGCRPN 472
           CKE    KA  L+        + +  +Y++L+   C      ++   L + M R G  PN
Sbjct: 526 CKELDFDKAESLLSFFAMEFRIFDTLSYNSLVNALCETGSGYDKVLDLQERMQRLGFVPN 585

Query: 473 KHIFEMLMSTFCQ 485
               + L+    Q
Sbjct: 586 SLTCKYLIQVLEQ 598



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 95/225 (42%), Gaps = 35/225 (15%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN----------------TLING 377
           + F+ L+ G+ K G + +    F ++  +    +VVT N                 + N 
Sbjct: 165 VVFDMLVKGYLKLGLVEDGFSTFRKVIDSGFRVSVVTCNHLLNGLLKLDLMEDCWQVYNV 224

Query: 378 YGQVG-----------------NSEMGA--SLYEEMLRNGIKVDILTYNALILGLCKEGK 418
             +VG                 NS  G      E+M   G + D++TYN L+   C+ G+
Sbjct: 225 MCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGR 284

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A YL K + +  +VP+  TY++LI G C       A Q +  M+  G +P+   +  
Sbjct: 285 LKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNT 344

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           L+  +C+     ++ ++L EML   + PD      +  G    G+
Sbjct: 345 LIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGR 389



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 55/263 (20%)

Query: 281 RAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFK-NLMEKNGIQPNVITFNT 338
           RA+  FK ++  +G  P+V  Y  L+    +     LAM+F   L+E    +     F+ 
Sbjct: 93  RALTFFKWVKFDLGKRPNVGNYCLLLHILASSKKFPLAMQFLCELIELTSKKEEEDVFSV 152

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+                S     N  P  V ++ L+ GY ++G  E G S + +++ +G
Sbjct: 153 LV----------------SASDECNWDP--VVFDMLVKGYLKLGLVEDGFSTFRKVIDSG 194

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            +V ++T N L+                                    G       E  +
Sbjct: 195 FRVSVVTCNHLL-----------------------------------NGLLKLDLMEDCW 219

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q+Y  M R G  PN + F +L + FC N ++    + L +M E+   PD +  + L S  
Sbjct: 220 QVYNVMCRVGIHPNTYTFNILTNVFCNNSNYGEVDDFLEKMEEEGFEPDLVTYNTLVSSY 279

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ + A  L++ M  R ++P
Sbjct: 280 CRRGRLKEAFYLYKIMYRRRVVP 302


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 168/327 (51%), Gaps = 2/327 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F++L +      +  +A + F +M+  G    + S N  +S +  +  +D A   ++ M
Sbjct: 118 LFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRM 177

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++P+VYT   ++   C++G IE A  VF+ M   G  P+   +  LI  HC KG  
Sbjct: 178 SEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDA 237

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
              ++    M + G++P+ +T+N ++ G C+   L  A+ I  EM++  + P+ VTY TL
Sbjct: 238 ETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL 297

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+GY +    +M   + + M+  G+ +D +TY ALI GL K G++  A  ++ ++ +  L
Sbjct: 298 IDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGL 357

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+ +TY+ +I   C + + +   +L K M   G +P    + ++M+ FC+      A  
Sbjct: 358 EPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADM 417

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC 521
           +L  M+   ++PD I  + L  G  HC
Sbjct: 418 LLNAMINIGVSPDDITYNILLDG--HC 442



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 151/295 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  FY ++    + P     N++M    +LG +  A  VF  M+S G   +V ++NT+IS
Sbjct: 100 ACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMIS 159

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A      M + G+ P+V T+  LI G C+ G++ +A  +F +M    + P
Sbjct: 160 GMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKP 219

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V +  LI+ + + G++E    L+ EM   G++ D +TYNA++ GLC+    K A+ +V
Sbjct: 220 NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIV 279

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    L P+  TY+ LI G C  +  + A ++ ++M+  G   ++  +  L+S   + 
Sbjct: 280 VEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKA 339

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A  VL EM+E  + PD+   + +       G  +  ++L ++M+ +G  P
Sbjct: 340 GRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKP 394



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 147/326 (45%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + Q+ D G  P  +  N  +  L+    +  A   + EM+   +   V + N ++   C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++ A  + + M   G  P V TY  LI G C  G +  A      M   G++PN + 
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F  LI   CKKG       +  EM+   V P+ VTYN ++NG  +  + +  + +  EM 
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G++ D +TY  LI G CKE +   A  + +++    +  +  TY+ALI+G      S 
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++   M+ +G  P+   + M++  FC+  D      +L EM  K   P  +  + + 
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIM 403

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +G    G+ + A  L   M   G+ P
Sbjct: 404 NGFCKLGQMKNADMLLNAMINIGVSP 429



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 132/270 (48%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P    +N L+      G L+ A    + M+  G++  V++FNT+I G C+ G L  A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +   M    V+P+V TY  LI G  +VG  E    ++E+M   G+K + + +  LI  
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK+G  +    L +++ +  + P+A TY+A++ G C  ++ + A  +   M  +G RP+
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +C+ E+ D A E+   M+ + +  D +  + L SGL   G+   A ++  
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +M   GL P        I+     G+ ++G
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTG 380



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%), Gaps = 12/270 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF +L   +  +       +   +MR+ G  P   + N  ++ L  +  +  A G   E
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVE 281

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   + P+  T   ++  +CK   ++ A+E+ +NM + G      TY  LISG    G 
Sbjct: 282 MRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGR 341

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            + A +    M + G++P+  T+  +I  FC+KG +    R+  EM+     P VVTYN 
Sbjct: 342 SADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNV 401

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK-- 431
           ++NG+ ++G  +    L   M+  G+  D +TYN L+ G CK GK       V D+++  
Sbjct: 402 IMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGK-------VTDIEELK 454

Query: 432 --NSLVPNASTYSALITGQCVRKNSERAFQ 459
                VP+   Y++++ G+ V+K + + + 
Sbjct: 455 SAKGTVPDLGVYTSIV-GEIVKKKTTKTYH 483



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 47/191 (24%), Positives = 93/191 (48%)

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA   + ++    + P    +N L+    ++G      ++++EM   G++  ++++N +I
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G+C+ G    A  L + + +  + P+  TY ALI G C     E A  +++ M   G +
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN  +F +L+   C+  D +   E+  EM E+ + PD++  + + +GL      + A  +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278

Query: 531 FRKMEIRGLLP 541
             +M   GL P
Sbjct: 279 VVEMRSAGLRP 289


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 206/450 (45%), Gaps = 52/450 (11%)

Query: 143 HSIVLHILTKNRKFK-----SSESILRGI-LDSDSFDL-------PSKLFDSILYSYRMC 189
           ++I L+ L ++ K K      S+ +  GI LD  +F++         +L  +IL    M 
Sbjct: 126 YNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMA 185

Query: 190 D----SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +       + F  L + +        A     QM  YG L    S    ++      RV+
Sbjct: 186 NHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVE 245

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            AL F  E+     SP+  T N +++ FC++G +  A+++   M   GF P V TYN+LI
Sbjct: 246 EALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLI 305

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG C  G    A++    M      PN +T+NTLI   CK+ ++  A  +   + +  + 
Sbjct: 306 SGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLL 365

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V T+NTLI G     N ++   ++EEM   G K D  TY+ LI  LC E + K+A  L
Sbjct: 366 PDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALML 425

Query: 426 VKDLD-----KNSLVPN------------------------------ASTYSALITGQCV 450
           +K+++     +N++V N                              + TY+ LI G C 
Sbjct: 426 LKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK 485

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            K  E A QL   MI  G +P+K  +  L++ FC+  D ++A +++  M      PD   
Sbjct: 486 NKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFT 545

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              L  GL   G+ ++A KL R ++++G++
Sbjct: 546 YGTLIGGLCRAGRVDVASKLLRSVQMKGIV 575



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 191/404 (47%), Gaps = 10/404 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+     F+   ++   ++   R C  + + ++ L        +   ATD    + 
Sbjct: 303 SLISGMCKLGEFEKAIEILQQMIL--RECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP + + N  +  L  S+  DIA+  ++EM+     P+ +T ++++ + C    ++
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ + K MES G   +   YNTLI G C    +  A +  + ME  G+  + +T+NTLI
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  ++ EA+++  +M    + P+  TYN+L+  + +VG+ E    + + M  NG +
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 540

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI TY  LI GLC+ G+   A+ L++ +    +V     Y+ +I    +RK ++   +L
Sbjct: 541 PDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRL 600

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNED-FDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           ++ M+     P+    +++    C        A +  +EMLEK + P+      L  GL 
Sbjct: 601 FREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660

Query: 520 HCGKDELAMKLFRKM-------EIRGLLPKGFDKLRTINCAPEN 556
               ++  ++L   +       E    + +GF K+R  N A  N
Sbjct: 661 SLSMEDTLIELINMVMEKAQMSERETSMIRGFLKIRKFNDALAN 704


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 177/347 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +    K   +A D +C+M      P + + +  +S      ++  A+  +  
Sbjct: 199 VMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNR 258

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + I+PNVYT ++++  FCK G +  A  V   M        V TYN+L+ G+C    
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQ 318

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    N+M + G+ P+V +++ +I GFCK   + EA ++F EM    + PNVVTYN+
Sbjct: 319 VNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNS 378

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G  + G +     L +EM   G   +I+TYN+++  +CK     KA  L+  + +  
Sbjct: 379 LVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ LI G C     + A ++++ ++  G  PN + +  L++ FC    FD   
Sbjct: 439 IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGL 498

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +L +M +    P++I    L   L    +++ A KL R+M  RGLL
Sbjct: 499 AMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 159/316 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + +    + PNV   + ++ + CK  ++  A +++  M S    P V TY++LIS
Sbjct: 182 AVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLIS 241

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A+   N M  + I PNV TF+ LI GFCK+GK+ EA  + + M   NV  
Sbjct: 242 GFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKL 301

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYN+L++GY  V       SL+  M + G+  D+ +Y+ +I G CK     +A  L 
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLF 361

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++    + PN  TY++L+ G C    +  A +L   M   G   N   +  ++   C+N
Sbjct: 362 EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKN 421

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              D+A  +L ++ EK + PD    + L +GL   G+ + A K+F  + ++G  P  +  
Sbjct: 422 NHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTY 481

Query: 547 LRTINCAPENGEKESG 562
              IN     G  + G
Sbjct: 482 TSLINGFCNKGFFDEG 497



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 175/348 (50%), Gaps = 36/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P IE   K L SLL +++   AL   ++M  N I P+  T N++M+ F +LG I+ +  V
Sbjct: 57  PAIEF-GKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------- 330
           F  +   G+ P   T+  LI G C KG +  A+ F + +   G Q               
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 331 --------------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                               PNV+ ++T+I   CK   +++A  ++ EM +  +SP+VVT
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y++LI+G+  VG  +    L+  M+ + I  ++ T++ LI G CKEGK ++A  ++  + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K ++  +  TY++L+ G C+ K   +A  L+  M + G  P+   + ++++ FC+ +  D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A ++  EM  K + P+ +  + L  GL   G+   A++L  +M  RG
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRG 403



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 167/307 (54%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + S+   + V+ A   Y EM   RISP+V T + ++  FC +G ++ AV++F  M S   
Sbjct: 205 IDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNI 264

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+V T++ LI G C +G +  A     +M K  ++ +V+T+N+L+ G+C   ++++A  
Sbjct: 265 NPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKS 324

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F+ M    V+P+V +Y+ +ING+ ++   +    L+EEM    I  +++TYN+L+ GLC
Sbjct: 325 LFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLC 384

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G+T  A  LV ++       N  TY++++   C   + ++A  L   +   G +P+  
Sbjct: 385 KSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIF 444

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L++  C+    D A +V  ++L K  +P+    + L +G  + G  +  + +  KM
Sbjct: 445 TYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKM 504

Query: 535 EIRGLLP 541
           +  G +P
Sbjct: 505 KDNGCIP 511


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 170/341 (49%), Gaps = 13/341 (3%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           +R K  N+ DT            + S ++ ++ L    ++  A+  ++EM     +P+ +
Sbjct: 79  YRPKLLNSQDTD-----------VISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N++++  CK   +E  V +   M++ GF P+V TY TLI G C  G +  AM   + M
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK--ATNVSPNVVTYNTLINGYGQVG 382
           E  GI PN +T+  LI G C  G++  A  +  EMK       PNVVTY  LI+G  Q G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             EMG    +EM+ +G   +  TY ALI GLC++G   +AA L+ ++       +   Y+
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +LI G C     + A ++   M+  G  P+   +  L+   C     D A  ++ EM  K
Sbjct: 308 SLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            + P+S+  + L +G     + + A++L  +M+  GL+P G
Sbjct: 368 GIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAG 408



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 154/307 (50%), Gaps = 2/307 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           +L  Y+    N    +V + +  ++  CK G I  A+E+F+ ME  G  P   TYN LI+
Sbjct: 75  SLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILIN 134

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    L + +   + M+  G  P V+T+ TLI GFC  G++  A  I  EM+   ++P
Sbjct: 135 GLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITP 194

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGKTKKAAY 424
           N VTY  LI G    G  E    + +EM   G +   +++TY  LI GLC++G  +    
Sbjct: 195 NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGME 254

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            + ++  +   PN +TY+ALI G C + +   A  L   M+  GC  +  I+  L+   C
Sbjct: 255 FLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLC 314

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +  + D A E+ + M+EK +APD    + L  GL   G  + A+ L ++M  +G++P   
Sbjct: 315 KMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSV 374

Query: 545 DKLRTIN 551
                IN
Sbjct: 375 TYTTLIN 381



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 145/297 (48%), Gaps = 4/297 (1%)

Query: 191 SSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           S+P    +++L        +         +M+  GF P + +    +     + RVD A+
Sbjct: 122 SAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAM 181

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG--FIPSVTTYNTLIS 306
               EM    I+PN  T   ++   C  G +ERA+ V K M+  G    P+V TY  LI 
Sbjct: 182 DILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIH 241

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C KGL  + M+F + M  +G  PN  T+  LI G C+KG   EA  + +EM A     
Sbjct: 242 GLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCEL 301

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VV YN+LI+G  ++G  +    +   M+  G+  D+ TY +LI GLC  G   +A  L+
Sbjct: 302 DVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLM 361

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +++    +VPN+ TY+ LI G      ++ A QL   M  +G  P   I+++L  + 
Sbjct: 362 QEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 152/316 (48%), Gaps = 2/316 (0%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
           + +   A + F +M + G  P   + N  ++ L    ++++ +    EM+    SP V T
Sbjct: 104 KGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVT 163

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
              ++H FC  G ++ A+++   ME  G  P+  TY  LI G C+ G +  A+     M+
Sbjct: 164 YTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMK 223

Query: 326 KNGIQ--PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
             G +  PNV+T+  LI G C+KG          EM  +   PN  TY  LI+G  Q G+
Sbjct: 224 LRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGS 283

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
               A L  EM+  G ++D++ YN+LI GLCK G+   A  +   + +  + P+  TY++
Sbjct: 284 FLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTS 343

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C     + A  L + M   G  PN   +  L++ F Q +  D A +++ EM    
Sbjct: 344 LIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNG 403

Query: 504 MAPDSIILSELYSGLH 519
           + P   I   L+  L+
Sbjct: 404 LMPAGDIYKILFKSLY 419



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 57/129 (44%)

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           NS   +  +YS  I G C +     A ++++ M   G  P+   + +L++  C++   + 
Sbjct: 85  NSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEM 144

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
              ++ EM  +  +P  +  + L  G    G+ + AM +  +ME RG+ P        I 
Sbjct: 145 GVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQ 204

Query: 552 CAPENGEKE 560
              + GE E
Sbjct: 205 GLCDCGEVE 213



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 52/116 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   ++++ L        +   A +    M + G  P + +    +  L D+  +D AL
Sbjct: 299 CELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEAL 358

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           G  +EMR   I PN  T   +++ F +    + A+++   M+S G +P+   Y  L
Sbjct: 359 GLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKIL 414


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 234/502 (46%), Gaps = 39/502 (7%)

Query: 57  MKMNRNPIPIPHRTLPEPKGQDL--DFVNIAYSHLIHSDWKK--LTALS-THLTPFRVKH 111
           +K    P P P +   +P+  +L  D + + ++H   + W++   T  S + +    V H
Sbjct: 9   IKSKAKPTP-PSKPSLKPRINNLVKDILEVLHTH---NQWEENLQTRFSESEVLASDVAH 64

Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPSS-LTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           ++L   +D  L L+FF WV   + S  +    +S +L +L ++R F   E +L  +    
Sbjct: 65  LVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENM---- 120

Query: 171 SFDLPSKLFDSILYSYRMCDSSPL--VFDLLFKTYAHRKKFRNATDTFC-QMRDYGFLPI 227
                           R+ + SP      ++ + Y+       A + +   ++ Y + P 
Sbjct: 121 ----------------RVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPD 164

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRR-----NRISPNVYTLNMVMHAFCKLGIIERA 282
           + +CN  L+ L+   R++IA   Y EM       +R   N Y+  +++   CK G +E  
Sbjct: 165 VIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDN-YSTCIMVKGLCKEGKLEEG 223

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++ ++    G IP++  YNTLI G+C KG + +A      ++  G  P V T+  +I G
Sbjct: 224 RKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIING 283

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCKKG     +R+  EM +  ++ NV  YNT+I+   + G+        E M+  G K D
Sbjct: 284 FCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 343

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN LI G C++GK  +A  L++      L+PN  +Y+ LI   C +   +RA     
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 403

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   G +P+   +  L+       + D A  +  +MLE+ + PD+ I + L SGL    
Sbjct: 404 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 463

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
           K   A  L  +M  + +LP  F
Sbjct: 464 KLPAAKLLLAEMLDQSVLPDAF 485



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 196/421 (46%), Gaps = 18/421 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ET+  +++   K   FK+ + +L   ++S    +  +++++I+             D 
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLME-MNSRGLTVNVQVYNTII-------------DA 318

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
            +K + H  K   A +T   M + G  P I + N  +S      +V  A    ++     
Sbjct: 319 RYK-HGHIVK---AVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG 374

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN ++   ++HA+CK G  +RA      M   G  P + TY  L+ G    G + +A+
Sbjct: 375 LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVAL 434

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
             +  M + G+ P+   +N L+ G CKK KL  A  + +EM   +V P+   Y TL++G+
Sbjct: 435 TIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGF 494

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + GN +    L+E  +  G+   I+ YNA+I G CK G  K A   +  + K  L P+ 
Sbjct: 495 IRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDE 554

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS +I G   + + + A ++++ M++  C+PN   +  L++ FC+  D  R+ ++  E
Sbjct: 555 FTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M    + P+ +  S L        K   A   F +M +   +P        +N   +NG 
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674

Query: 559 K 559
           +
Sbjct: 675 R 675



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 160/371 (43%), Gaps = 53/371 (14%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  +  +  A++   +M + G  P + +    +  L+ +  VD+AL   ++M    
Sbjct: 385 LIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERG 444

Query: 259 ISPNVYTLNMVMHAFCKL-----------------------------------GIIERAV 283
           + P+    N++M   CK                                    G ++ A 
Sbjct: 445 VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEAR 504

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F+     G  P +  YN +I G+C  G++  AM   N M+K  + P+  T++T+I G+
Sbjct: 505 KLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGY 564

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            K+  L  A ++F EM      PNVVTY +LING+ + G+      ++ EM   G+  ++
Sbjct: 565 VKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNV 624

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA------ 457
           +TY+ LI   CKE K   AA   +++  N  VPN  T++ L+ G    KN  RA      
Sbjct: 625 VTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNG--FSKNGTRAISEKGN 682

Query: 458 -FQ---------LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            FQ          +  MI  G  P    +  ++   CQ   F  A ++  +M  K   PD
Sbjct: 683 EFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPD 742

Query: 508 SIILSELYSGL 518
           S+    L  G+
Sbjct: 743 SVSFVALLHGV 753



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 138/303 (45%), Gaps = 22/303 (7%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           F LP+    + L    M D S L    V+  L   +        A   F    + G  P 
Sbjct: 463 FKLPA----AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPG 518

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I   N  +        +  A+     M++  ++P+ +T + V+  + K   ++ A ++F+
Sbjct: 519 IVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFR 578

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M  M   P+V TY +LI+G C KG L  ++K    M+  G+ PNV+T++ LI  FCK+ 
Sbjct: 579 EMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEA 638

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN---SEMGASLYE-----------E 393
           KL +A   F EM      PN VT+N L+NG+ + G    SE G    E            
Sbjct: 639 KLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGR 698

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+ +G       YN++++ LC+ G  + A  L   +     +P++ ++ AL+ G C+   
Sbjct: 699 MISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGR 758

Query: 454 SER 456
           S+ 
Sbjct: 759 SKE 761


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 163/312 (52%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+PN YT   V+  +CK+G ++ AV+VF  M 
Sbjct: 76  NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 135

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + P    YN LI G+C++G L  A+ +++ M + G+   V T+N L+      G+ 
Sbjct: 136 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 195

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    ++P+V TYN LING+ + GN +    ++E M R G++  ++TY +L
Sbjct: 196 TEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 255

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  L K+G+ ++   L  +  +  + P+   Y+ALI       N +RAF++   M +   
Sbjct: 256 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 315

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C     D A +++ EM ++ + PD +  + L SG    G  + A++
Sbjct: 316 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 375

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 376 IRNEMMNKGFNP 387



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNK 311
           E+ R    PN  T N V+  FC  G ++ A+++ + M E  G  P+  TY T+ISG C  
Sbjct: 62  ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A+K F  ++ K  ++P  + +N LI G+C +GKL  A      M    V+  V T
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN L++     G       L EEM   G+  D+ TYN LI G CKEG  KKA  + +++ 
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  +     TY++LI     +   +   +L+   +R G RP+  ++  L+++   + + D
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA E++ EM +K +APD +  + L  GL   G+ + A KL  +M  RG+ P
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 352



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 147/287 (51%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    D  ++D AL +   M    ++  V T N+++HA    G    A E+ + M  
Sbjct: 148 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 207

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P V TYN LI+GHC +G +  A++    M + G++  V+T+ +LI+   KKG++ E
Sbjct: 208 KGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 267

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            +++F E     + P++V YN LIN +   GN +    +  EM +  I  D +TYN L+ 
Sbjct: 268 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 327

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+  +A  L+ ++ K  + P+  TY+ LI+G  ++ + + A ++   M+  G  P
Sbjct: 328 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 387

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               +  L+   C+N   D A  ++ EM+E  + PD      L  GL
Sbjct: 388 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 158/334 (47%), Gaps = 38/334 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   K+FD +L    +     ++++ L   Y  + K   A     +M 
Sbjct: 113 TVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDRMV 171

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + N  + +L    R   A    +EM    ++P+V+T N++++  CK G ++
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVK 231

Query: 281 RAVEVFKNMESMGFIPSVTTY-----------------------------------NTLI 305
           +A+E+F+NM   G   +V TY                                   N LI
Sbjct: 232 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 291

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           + H   G +  A +    MEK  I P+ +T+NTL+ G C  G++ EA ++  EM    + 
Sbjct: 292 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 351

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++VTYNTLI+GY   G+ +    +  EM+  G    +LTYNALI GLCK G+   A  +
Sbjct: 352 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 411

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           VK++ +N + P+ STY +LI G  +    ERA  
Sbjct: 412 VKEMVENGITPDDSTYISLIEG--LTTEDERAID 443



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNASTYSALITGQCVR 451
           E+LR   + + +TYN +I G C  G+ + A  +++++ ++  + PN  TY  +I+G C  
Sbjct: 62  ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKV 121

Query: 452 KNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              + A +++  M+  G  +P   ++  L+  +C     D A      M+E+ +A     
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L   L   G+   A +L  +M  +GL P  F
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 226/454 (49%), Gaps = 29/454 (6%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           +T   P  V  V   +       ++F   VQ H   + ++ + SI++H            
Sbjct: 47  TTTKLPRLVSKVFKTLNWGVAREIKFKGCVQIHGFEN-SINSFSIIIHTYALAGMSWEVF 105

Query: 161 SILRGIL------DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
            ++R I+      + D+ +L S L D         + S +VFD+L K +A      +A  
Sbjct: 106 ILIRDIVTFYKEENRDAGELVSLLLD--------VEKSNVVFDMLIKVFASNSMLEHANY 157

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F + +D G    I SCN  L  L++  RVD     ++ + +    PN++T  ++M+ FC
Sbjct: 158 VFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFC 217

Query: 275 KLGI-----IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNG 328
           + G+     I RA E+   +   G  P+V TY T I G C  GL  +A +  +NL  KN 
Sbjct: 218 R-GVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKN- 275

Query: 329 IQP-NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            QP N   FN +I+G C+ G L EA+ +F EMK + + P+V +Y+ LI+G+ + G  +  
Sbjct: 276 -QPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQA 334

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           + +++EM  +GI  +I +Y+ LI G CKEG+  KA  + +++  + ++P+  +YS LI G
Sbjct: 335 SEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDG 394

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C + + + A + ++ M  +   P+   +  L+  + +++ F  A +    M +  M PD
Sbjct: 395 FCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPD 454

Query: 508 SIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
           +I  + + S   +C K +   A+ L  K +  G+
Sbjct: 455 TIACNHILS--IYCRKPDFNKALALSEKFQENGV 486



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 171/330 (51%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A++ F +M++ G LP + S +  +       RVD A   +KEMR + I PN+Y+ ++++ 
Sbjct: 299 ASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILID 358

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FCK G +++A+EVF+ M++ G +P V +Y+ LI G C KG +  A+KF   M  N   P
Sbjct: 359 GFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSP 418

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   + +LI G+ K  +   A + F  M+   + P+ +  N +++ Y +  +     +L 
Sbjct: 419 SAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALS 478

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+   NG+  +  +YN  I  +C+    +KA  L+  + K +++P+   YS LI+    R
Sbjct: 479 EKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKR 538

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            NSE+A  L+  M + G   N   + +L++ F  +   D A  +   M E  + PD I  
Sbjct: 539 LNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAY 598

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G  + G+   A  LF +M   G  P
Sbjct: 599 TSLVAGFCNTGEMTRARALFDEMSREGCSP 628



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 195/413 (47%), Gaps = 37/413 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D  S++F  +  S  + D     + +L   +  + +   A++ F +MR
Sbjct: 285 AVIYGLCQGGILDEASEVFKEMKNSGILPDVYS--YSILIDGFCRKGRVDQASEVFKEMR 342

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G LP I S +  +       RVD AL  ++EM+ + I P+VY+ ++++  FC+ G ++
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A++ ++ M S  F PS   Y +LI G+      + A+K   +M+K G+ P+ I  N ++
Sbjct: 403 SAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHIL 462

Query: 341 FGFCKKGKLHEA---NRIFSE--------------------------------MKATNVS 365
             +C+K   ++A   +  F E                                M   NV 
Sbjct: 463 SIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVL 522

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VV Y+TLI+ + +  NSE    L+ +M + GI  ++ TY  LI     + K   A  L
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRL 582

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
            K + ++ + P+   Y++L+ G C      RA  L+  M R GC PN   +   ++ + +
Sbjct: 583 FKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLK 642

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
               ++A ++  +M E+ + PD I+ + L +   + G+   A  LF +M+  G
Sbjct: 643 LNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEG 695



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 162/330 (49%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A++   ++   G  P + +   ++  L       +A    + + R     N +  N V
Sbjct: 227 RRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAV 286

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++  C+ GI++ A EVFK M++ G +P V +Y+ LI G C KG +  A +    M  +GI
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGI 346

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PN+ +++ LI GFCK+G++ +A  +F EMK + + P+V +Y+ LI+G+ + G+ +    
Sbjct: 347 LPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIK 406

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            +EEM  N        Y +LI G  K  +   A    + + K  + P+    + +++  C
Sbjct: 407 FWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYC 466

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            + +  +A  L +    +G   N + +   +   C+    ++A ++L  ML++ + PD +
Sbjct: 467 RKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVV 526

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             S L S        E A+ LF KM   G+
Sbjct: 527 NYSTLISCFAKRLNSEKAVMLFIKMTKVGI 556



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 144/309 (46%), Gaps = 13/309 (4%)

Query: 250 FYKEMRRNR---------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           FYKE  R+          +  +    +M++  F    ++E A  VF   +  G   ++ +
Sbjct: 114 FYKEENRDAGELVSLLLDVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMS 173

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK----KGKLHEANRIF 356
            N L+        +        ++ K G +PN+ T+  ++  FC+       +  A+ I 
Sbjct: 174 CNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEIL 233

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            ++  +  +PNVVTY T I G  +VG   +   L + + R    ++   +NA+I GLC+ 
Sbjct: 234 GKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQG 293

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A+ + K++  + ++P+  +YS LI G C +   ++A +++K M  SG  PN + +
Sbjct: 294 GILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSY 353

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +L+  FC+    D+A EV  EM    + PD    S L  G    G  + A+K + +M  
Sbjct: 354 SILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413

Query: 537 RGLLPKGFD 545
               P  F+
Sbjct: 414 NNFSPSAFN 422



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 4/240 (1%)

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN----GYGQVG 382
           +GI+ N+++ N L+    +  ++     +F  +      PN+ TY  ++N    G G   
Sbjct: 165 DGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSV 224

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +    + +  ++  +G   +++TY   I GLCK G    A  L+++L + +   N   ++
Sbjct: 225 DIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFN 284

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           A+I G C     + A +++K M  SG  P+ + + +L+  FC+    D+A+EV  EM   
Sbjct: 285 AVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS 344

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + P+    S L  G    G+ + A+++F +M+  G+LP  +     I+     G+ +S 
Sbjct: 345 GILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSA 404



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 1/120 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + EM R   SPNV T    ++ + KL    +A ++++ M+  G  P    Y  LI+
Sbjct: 614 ARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIA 673

Query: 307 GHCNKGLLSLAMKFKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             CN G ++ A    + M++ G   PNV+ +  LI  + K  K  +A +++ EM+A  +S
Sbjct: 674 AFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 166/351 (47%), Gaps = 2/351 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            +  L   +   +K   A     +M D G +P + +C   +++     R+  A+  ++ M
Sbjct: 267 AYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R     PNV+T N ++  FC  G + +A+ +   M   G  P V TYN LI G C  G +
Sbjct: 327 RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +   LME NG+  +  T+N LI   CK GK+ EA  +F  ++   + PN VT+NT+
Sbjct: 387 GSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING  + G  ++  +  E M+  G   D  TY+  I  LCK   +++  + + ++ +  +
Sbjct: 447 INGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDV 506

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+   Y+ +I      +N   A +++  M+  GC P+   +   +  +C     D A  
Sbjct: 507 KPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAEN 566

Query: 495 VLLEMLEKCMA-PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           V+ EM +KC    D++  + L  G    G+ + A+ + + M     +P  F
Sbjct: 567 VVTEM-KKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHF 616



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 196/455 (43%), Gaps = 57/455 (12%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L L  F  +  H P + T  T++ ++  L +    + ++  L  ++ S            
Sbjct: 111 LMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRS------------ 158

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
               +R        F+ L   Y   ++   A D FC+M   GF     S    +    ++
Sbjct: 159 ---GWR---PDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEA 212

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------- 294
            R+D AL  ++EM +    P++YT   ++   C  G  E  + + + M+ +G+       
Sbjct: 213 GRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAY 268

Query: 295 ----------------------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
                                       +P V T   +++ +C +G +S A++    M  
Sbjct: 269 AALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRF 328

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G +PNV T+N ++ GFC  GK+++A  +  +M+   V P+VVTYN LI G    G+   
Sbjct: 329 KGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGS 388

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L   M  NG+  D  TYN LI  LCK GK  +A  L   L+   + PN+ T++ +I 
Sbjct: 389 AFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVIN 448

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     + A    ++MI +G  P+ + +   +   C+ +        + EML+K + P
Sbjct: 449 GLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKP 508

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++  + + + L +     LA +++ +M  +G  P
Sbjct: 509 STVNYTIVINRLFNERNYGLATRIWGQMVSQGCSP 543



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 2/300 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++F+S+   ++ C+ +   ++ + + + +  K   A     QMR+ G  P + + N  + 
Sbjct: 321 RVFESM--RFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  +  A    + M  N ++ + YT N+++ A CK G ++ A  +F  +E  G  P
Sbjct: 379 GQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+NT+I+G C  G   +A  F   M   G  P+  T++  I   CK     E     
Sbjct: 439 NSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFI 498

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM   +V P+ V Y  +IN      N  +   ++ +M+  G   D++TY   +   C E
Sbjct: 499 DEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNE 558

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+  +A  +V ++ K   + +A  Y+ LI G      ++RA  + K M      PN   F
Sbjct: 559 GRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 148/370 (40%), Gaps = 23/370 (6%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           FD P   F S+L  +     +PL+  L    Y H                    P   + 
Sbjct: 92  FDRP---FRSLLTHFSRYALTPLMLRLFAHMYRHAPP----------------APTGATY 132

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + +L     +  A  +   M R+   P+ +T N ++  +C+   +E A ++F  M  
Sbjct: 133 NALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPF 192

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            GF     +Y  LI G C  G +  A++    M     QP++ T   L+ G C  G+  E
Sbjct: 193 RGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEE 248

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +  +MK     P    Y  L++ + +   +E    +  EM  +G+   ++T   ++ 
Sbjct: 249 GLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVN 308

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             C+EG+   A  + + +      PN  TY+A++ G C      +A  L   M   G  P
Sbjct: 309 AYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEP 368

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   + +L+   C +     A  +L  M    +A D    + L   L   GK + A  LF
Sbjct: 369 DVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428

Query: 532 RKMEIRGLLP 541
             +E RG+ P
Sbjct: 429 DGLEYRGIRP 438



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/443 (21%), Positives = 159/443 (35%), Gaps = 88/443 (19%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           ++L   R C   P  + ++LL +         +A      M   G      + N  + +L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             + +VD A   +  +    I PN  T N V++  CK G  + A    +NM S G+ P  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDT 475

Query: 299 TTYNTLISGHC-----NKGLL------------------------------SLAMKFKNL 323
            TY+  I   C      +GL                                LA +    
Sbjct: 476 YTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQ 535

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G  P+V+T+ T +  +C +G+L EA  + +EMK      + + YNTLI+G+  +G 
Sbjct: 536 MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQ 595

Query: 384 SEMGAS---------------------------------------------------LYE 392
           ++   +                                                   L+E
Sbjct: 596 TDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFE 655

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            M +N +     TY +++ G  +E +  +   LV  + + +L  N   Y+AL+   C  +
Sbjct: 656 LMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLR 715

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               A+ L  SMI  G  PN   ++ L+S        DRA E+      K    D I+  
Sbjct: 716 MYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWK 775

Query: 513 ELYSGLHHCGKDELAMKLFRKME 535
            +  G    G  ++   +   +E
Sbjct: 776 VIIDGFIRKGHADMCHDMISMLE 798



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/284 (20%), Positives = 122/284 (42%), Gaps = 16/284 (5%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           AT  + QM   G  P + +    + +  +  R+D A     EM++ R   +    N ++ 
Sbjct: 529 ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLID 588

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTY--------------NTLISGHCNKGLLSLA 317
               +G  +RAV + K+M  +  +P+  T+              +  +        + LA
Sbjct: 589 GHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELA 648

Query: 318 MKFK--NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             F+   LM+KN +  +  T+ +++ GF ++ +L E   + S MK  N+  N   YN L+
Sbjct: 649 DVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALV 708

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N + ++       +L   M+ +G   +++ Y  L+ GL  EG+  +A  + +        
Sbjct: 709 NCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYN 768

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +   +  +I G   + +++    +   + +  C+P+   + ML
Sbjct: 769 TDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAML 812


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 4/367 (1%)

Query: 177 KLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           KL DS+   + M    PL     F  L    +  KK+      + QM+  G    + +CN
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             L+      ++ +AL F  +M +    P++ T   +++ FC+   I  A+ +F  M  M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+ P+V  YNT+I G C    +  A+   N ME +GI+P+ +T+N+LI G C  G+  +A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            R+ S M    + P+V T+N LI+   + G       LYEEM+R  +  DI+TY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC   +  +A  +   +      P+  TYS LI G C  K  E   +L+  M + G   N
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +L+  +C+    + A E+   M+   + P+ I  + L  GL   GK E A+ +  
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 533 KMEIRGL 539
            M+  G+
Sbjct: 421 DMQKSGM 427



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 176/334 (52%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  ++ D F  M     LP I   ++ LS++   ++ D+ +  +++M+   I  N+ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+   +  A+     M  +G  P + T+ +L++G C    +  A+   + M + 
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G +PNV+ +NT+I G CK  ++  A  + + M+   + P+ VTYN+LI+G    G  +  
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +   M +  I  D+ T+NALI    KEG+  +A  L +++ + SL P+  TYS LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYG 300

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C+    + A Q++  M+  GC P+   + +L++ +C+++  +   ++  EM ++ +  +
Sbjct: 301 LCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  + L  G    GK  +A ++F+ M   G+ P
Sbjct: 361 TVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP 394



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 162/345 (46%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           ++L   +    +   A     +M   G  P I +    L+     +R+  AL  +  M  
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVE 179

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               PNV   N ++   CK   ++ A+++   ME  G  P   TYN+LISG CN G    
Sbjct: 180 MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDD 239

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +  + M K  I P+V TFN LI    K+G++ EA  ++ EM   ++ P++VTY+ LI 
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIY 299

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G       +    ++  M+  G   D++TY+ LI G CK  K +    L  ++ +  +V 
Sbjct: 300 GLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY+ LI G C       A +++K M+  G  PN   + +L+   C N   ++A  +L
Sbjct: 360 NTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVIL 419

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +M +  M  D +  + +  G+   G+   A  L+  + ++GL P
Sbjct: 420 ADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 165/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    +  +A   F +M + G+ P +   N  +  L  S++VD AL     
Sbjct: 152 VTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNR 211

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + I P+  T N ++   C  G  + A  +   M      P V T+N LI     +G 
Sbjct: 212 MEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGR 271

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A +    M +  + P+++T++ LI+G C   +L EA ++F  M +    P+VVTY+ 
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LINGY +    E G  L+ EM + G+  + +TY  LI G C+ GK   A  + K +    
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ L+ G C     E+A  +   M +SG   +   + +++   C+  +   A 
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAW 451

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++   +  K + PD    + +  GL+  G    A  LFRKM+  G+LP
Sbjct: 452 DLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILP 499



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 141/282 (50%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
             + ++ L     +  ++ +AT     M      P + + N  + + +   R+  A   Y
Sbjct: 220 DAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELY 279

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +EM R  + P++ T +++++  C    ++ A ++F  M S G  P V TY+ LI+G+C  
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKS 339

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +   MK    M + G+  N +T+  LI G+C+ GKL+ A  IF  M    V PN++TY
Sbjct: 340 KKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITY 399

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N L++G    G  E    +  +M ++G+  DI+TYN +I G+CK G+   A  L   L+ 
Sbjct: 400 NVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNL 459

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
             L P+  TY+A++ G   +     A  L++ M   G  PN+
Sbjct: 460 KGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 105/213 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  D   + + LL        +   A   F  M   G  P + + +  ++    S++V+ 
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            +  + EM +  +  N  T  +++  +C+ G +  A E+FK M   G  P++ TYN L+ 
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLH 404

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C+ G +  A+     M+K+G+  +++T+N +I G CK G++ +A  ++  +    ++P
Sbjct: 405 GLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++ TY  ++ G  + G      +L+ +M  +GI
Sbjct: 465 DIWTYTAMMLGLYKKGLRGEADALFRKMKEDGI 497



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 85/179 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + + +L   Y   KK  +    FC+M   G +    +    +     + ++++A 
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAE 381

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K M    + PN+ T N+++H  C  G IE+A+ +  +M+  G    + TYN +I G 
Sbjct: 382 EIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGM 441

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G ++ A      +   G+ P++ T+  ++ G  KKG   EA+ +F +MK   + PN
Sbjct: 442 CKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 92/197 (46%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL ++  +F  M      P++  ++ L++   ++   ++   L+E+M   GI  ++ T N
Sbjct: 61  KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+   C+  +   A   +  + K    P+  T+ +L+ G C       A  ++  M+  
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEM 180

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN  I+  ++   C+++  D A ++L  M    + PD++  + L SGL + G+ + A
Sbjct: 181 GYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240

Query: 528 MKLFRKMEIRGLLPKGF 544
            ++   M  R + P  F
Sbjct: 241 TRMVSCMTKREIYPDVF 257


>gi|145358679|ref|NP_198856.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171831|sp|Q9FND8.1|PP409_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g40400
 gi|10178151|dbj|BAB11596.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|110742507|dbj|BAE99171.1| hypothetical protein [Arabidopsis thaliana]
 gi|332007160|gb|AED94543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 610

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 234/538 (43%), Gaps = 53/538 (9%)

Query: 74  PKGQDLD-FVNIAYSHLIHSDWK--------KLTALSTHLTPFRVKHVLLKVQKDYVLSL 124
           P+ Q+    V++  S L HSD+         ++ +L  HL    +  VLL+ Q D   ++
Sbjct: 38  PQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAI 97

Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
            FF WV+        +  + ++LHIL  ++KF  +   L  +++  S      +F  ++ 
Sbjct: 98  TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           +   C+  P+VFD+L K Y            F ++ D GF   + +CN  L+ LL  + +
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           +     Y  M R  I PN YT N++ + FC         +  + ME  GF P + TYNTL
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           +S +C +G L  A     +M +  + P+++T+ +LI G CK G++ EA++ F  M    +
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI------------------------- 399
            P+ ++YNTLI  Y + G  +    L  EML N +                         
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397

Query: 400 --------KVDI--LTYNALILGLCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQ 448
                   KVDI     + LI+ LC+EGK   A +L+ + +++        TY+ LI   
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                 E A  L   +       +   +  L+   C+      A  ++ EM +  + PDS
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517

Query: 509 IILSELYSGLHHC-----GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
            I   L  G  +C      K E  + LF  ME R   P+ ++ L    C    G K++
Sbjct: 518 FICGALVYG--YCKELDFDKAERLLSLF-AMEFRIFDPESYNSLVKAVCETGCGYKKA 572



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/362 (20%), Positives = 136/362 (37%), Gaps = 72/362 (19%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   + +   FR   D   +M + GF P + + N  +SS     R+  A   YK M 
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298

Query: 256 RNRISPNVYTL-----------------------------------NMVMHAFCKLGIIE 280
           R R+ P++ T                                    N +++A+CK G+++
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-------------------- 320
           ++ ++   M     +P   T   ++ G   +G L  A+ F                    
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418

Query: 321 ----------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
                             ++E+ G +    T+N LI    +   + EA  +  ++K  N 
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQ 478

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             +  TY  LI    ++G +    SL  EM  + +K D     AL+ G CKE    KA  
Sbjct: 479 VLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAER 538

Query: 425 LVKDLDKNSLVPNASTYSALITGQC-VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L+        + +  +Y++L+   C      ++A +L + M R G  PN+   + L+   
Sbjct: 539 LLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598

Query: 484 CQ 485
            Q
Sbjct: 599 EQ 600


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 181/385 (47%), Gaps = 37/385 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG+      D    + D +L   R C    + + +L +    R  ++ A     +MR
Sbjct: 157 TLIRGLCGRGRTDNALAVLDDMLR--RGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYK---------------------------- 252
           D G  P I + N  ++ +    RVD A+ F K                            
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 253 -------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                  EM R    PNV T NM++   C+ G++E A+E+   +   G  P+  +YN ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              C +  +  AM F  LM  +G  P+++++NTL+   C+ G++  A  +  ++K    +
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P +++YNT+I+G  + G +E    L  EM+  G++ DI+TY+ +  GLC+EG+ ++A   
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              +    + PN   Y+A++ G C R+ +  A  L+  M+ +GC PN+  + +L+     
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAY 514

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSII 510
                 A E++ E+  + +   +++
Sbjct: 515 EGLVKEAREMMAELCSRGVVSKTLV 539



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 142/283 (50%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+ YT N ++   C  G  + A+ V  +M   G +P V TY  L+   C +     A+
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M   G  P+++T+N ++ G C++G++ +A      + +    PN V+YN ++ G 
Sbjct: 208 KLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGL 267

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                 E    L  EM R G   +++T+N LI  LC+ G  + A  ++  + K    PN+
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ ++   C +K  +RA    + M+ SGC P+   +  L++  C+  + D A E+L +
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +K   P  I  + +  GL   GK E A++L  +M  +GL P
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQP 430



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 167/353 (47%), Gaps = 3/353 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + ++ +   Y    +  NA      M      P   + N  +  L    R D AL
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNAL 172

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M R    P+V T  +++ A CK    ++AV++   M   G  P + TYN +++G 
Sbjct: 173 AVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGI 232

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  AM+F   +   G +PN +++N ++ G C   +  +A ++ +EM      PNV
Sbjct: 233 CQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNV 292

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+N LI+   + G  E    + +++ + G   + L+YN ++   CK+ K  +A   V+ 
Sbjct: 293 VTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 352

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +  +   P+  +Y+ L+T  C     + A +L   +   GC P    +  ++    +   
Sbjct: 353 MVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGK 412

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A E+L EM+ K + PD I  S + SGL   G+ E A+K F K++  G+ P
Sbjct: 413 TEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 159/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +    R +  NA      M   G +P + +    L +         A+    EMR
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +P++ T N+V++  C+ G ++ A+E  K++ S G  P+  +YN ++ G C      
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K    M + G  PNV+TFN LI   C++G +  A  I  ++     +PN ++YN ++
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + +    +   +  E M+ +G   DI++YN L+  LC+ G+   A  L+  L      
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   +Y+ +I G      +E A +L   M+  G +P+   +  + S  C+    + A + 
Sbjct: 395 PVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKA 454

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++ +  + P++++ + +  GL        A+ LF  M   G +P
Sbjct: 455 FCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMP 500



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 27/161 (16%)

Query: 408 ALILGLCKEGKTKKAAYLVKDLDK-----NSLV----------------------PNAST 440
           ALI  LC  G+T +A  ++   +      N++V                      P+  T
Sbjct: 95  ALIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPMEPDTYT 154

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ LI G C R  ++ A  +   M+R GC P+   + +L+   C+   + +A ++L EM 
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +K  APD +  + + +G+   G+ + AM+  + +   G  P
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEP 255


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 172/353 (48%), Gaps = 5/353 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +PL+  LL + +      +   D   +M + G +P + + N  +  LL S +++ A   +
Sbjct: 306 NPLITGLLARGFV-----KKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EMR   + P+V T N +++ +CK G  + A+ +F ++   G  P+V TYN LI G+C  
Sbjct: 361 VEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 420

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A + K  M + G  P+V T+  L+ G      L      F EM +  + P+   Y
Sbjct: 421 GDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAY 480

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT I     +G+      L E ++  GI  D +TYN LI GLCK G  K A  L+  +  
Sbjct: 481 NTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMIS 540

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           N L P+  TY+ LI   C R     A + +  MI  G  P+   + +++  +C+  +   
Sbjct: 541 NGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYS 600

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           A     +MLE+ + P+ I  + L   L   G+ +LA + F +M  RGL+P  +
Sbjct: 601 AYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKY 653



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 153/310 (49%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A   F +MR  G LP + + N  L+    +     AL  + ++RR  ++P V T N
Sbjct: 352 QIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYN 411

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++  +C+LG +E A  + + M   G +P V TY  L+ G  N   L++  +F + M   
Sbjct: 412 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSK 471

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G++P+   +NT I      G + ++ ++   +    +S + VTYN LI+G  + GN +  
Sbjct: 472 GLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDA 531

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L  +M+ NG++ D +TY  LI   C+ G  ++A     D+  + L P+A TY+ +I  
Sbjct: 532 EELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHA 591

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C R N   A+  ++ M+  G  PN+  + +L+   C+      A     EMLE+ + P+
Sbjct: 592 YCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPN 651

Query: 508 SIILSELYSG 517
               + L  G
Sbjct: 652 KYTYTLLIDG 661



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 186/423 (43%), Gaps = 84/423 (19%)

Query: 203 YAHRKKFRNATDTFC---------QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           Y+   K R+AT   C         +M  +G  P ++ CNK L  L D+ R D     + E
Sbjct: 162 YSKECKARDATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAE 221

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG--FIPSVTTYNTLISGHCNK 311
           M +  I P++ T N ++ +F K G  ++   + K ME+ G   +P+  TYN +I+G   K
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARK 281

Query: 312 G----------LLSLAMKFKNL------------------------MEKNGIQPNVITFN 337
           G           + L+ K  +                         ME  GI P V+T+N
Sbjct: 282 GYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYN 341

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G  + G++  A   F EM+A  + P+V+TYN+L+NGY + GN +    L+ ++ R 
Sbjct: 342 AMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRA 401

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG---------- 447
           G+   +LTYN LI G C+ G  ++A  L +++ +   +P+  TY+ L+ G          
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMT 461

Query: 448 --------------QCVRKNSE-----------RAFQLYKSMIRSGCRPNKHIFEMLMST 482
                          C   N+            ++FQL + ++  G   +   + +L+  
Sbjct: 462 REFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDG 521

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
            C+  +   A E++++M+   + PD I  + L     HC +  L  A K F  M   GL 
Sbjct: 522 LCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHA--HCERGFLREARKFFNDMISDGLP 579

Query: 541 PKG 543
           P  
Sbjct: 580 PSA 582



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 125/255 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +++L   Y        A     +M + G LP + +    +    +   + +   F+ E
Sbjct: 408 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDE 467

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N  + A   LG I ++ ++ + +   G      TYN LI G C  G 
Sbjct: 468 MLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGN 527

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    M  NG+QP+ IT+  LI   C++G L EA + F++M +  + P+ VTY  
Sbjct: 528 LKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTV 587

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+ Y + GN       + +ML  G++ + +TYN LI  LC+ G+T+ A     ++ +  
Sbjct: 588 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERG 647

Query: 434 LVPNASTYSALITGQ 448
           LVPN  TY+ LI G+
Sbjct: 648 LVPNKYTYTLLIDGK 662



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 141/301 (46%), Gaps = 3/301 (0%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           + L  ++EM  + ++P+V   N V+         +    V   M  +G  PS+ TYNTL+
Sbjct: 179 LCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLL 238

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQ--PNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
                +G           ME  G    PN +T+N +I G  +KG L EA  +  EM+ + 
Sbjct: 239 DSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK 298

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            + +  TYN LI G    G  +    L  EM   GI   ++TYNA+I GL + G+ + A 
Sbjct: 299 KA-SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQ 357

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
               ++    L+P+  TY++L+ G C   N + A  L+  + R+G  P    + +L+  +
Sbjct: 358 AKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGY 417

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+  D + A  +  EM+E+   PD    + L  G H+     +  + F +M  +GL P  
Sbjct: 418 CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDC 477

Query: 544 F 544
           F
Sbjct: 478 F 478


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 174/346 (50%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            L+++ +       K   +A + F +M   G  P + + +  +S L +  R   A     +
Sbjct: 871  LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 930

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M   +I+P+V+T + ++ AF K G +  A +++  M      PS+ TY++LI+G C    
Sbjct: 931  MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 990

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A +    M      P+V+T+NTLI GFCK  ++ E   +F EM    +  N VTYN 
Sbjct: 991  LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 1050

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            LI G  Q G+ +M   +++EM+ +G+  +I+TYN L+ GLCK GK +KA  + + L ++ 
Sbjct: 1051 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 1110

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            + P   TY+ +I G C     E  + L+ ++   G +P+   +  ++S FC+    + A 
Sbjct: 1111 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 1170

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             +  EM E    P+S   + L       G  E + +L ++M   G 
Sbjct: 1171 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 1216



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 172/346 (49%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            + +L   +  R +   A     +M   G+ P I + +  L+    S+R+  A+    +M 
Sbjct: 733  YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 792

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 PN  T N ++H          A+ +   M + G  P + TY  +++G C +G   
Sbjct: 793  VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 852

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            LA    N ME+  ++P V+ +NT+I G CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 853  LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 912

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            +     G     + L  +M+   I  D+ T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 913  SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 972

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            P+  TYS+LI G C+    + A Q+++ M+   C P+   +  L+  FC+ +  +   EV
Sbjct: 973  PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 1032

Query: 496  LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EM ++ +  +++  + L  GL   G  ++A ++F++M   G+ P
Sbjct: 1033 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 183/362 (50%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L KT     K  +A D F  M      P I   N+ LS+++  ++ D+ +   K+M    
Sbjct: 159 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 218

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I  ++YT N+V++ FC    +  A+ +   M  +G+ P   T  +L++G C +  +S A+
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+++ +N +I   CK  ++++A   F E++   + PNVVTY  L+NG 
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                    A L  +M++  I  +++TY+AL+    K GK  +A  L +++ + S+ P+ 
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS+LI G C+    + A Q++  M+  GC  +   +  L++ FC+ +  +   ++  E
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M ++ +  +++  + L  G    G  + A + F +M+  G+ P  +     +    +NGE
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518

Query: 559 KE 560
            E
Sbjct: 519 LE 520



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 177/359 (49%), Gaps = 8/359 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +  +    K+  +A D F ++   G  P + +    ++ L +S R   A     +
Sbjct: 294 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 353

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M + +I+PNV T + ++ AF K G +  A E+F+ M  M   P + TY++LI+G C    
Sbjct: 354 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 413

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  +LM   G   +V+++NTLI GFCK  ++ +  ++F EM    +  N VTYNT
Sbjct: 414 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 473

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ Q G+ +     + +M   GI  DI TYN L+ GLC  G+ +KA  + +D+ K  
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +  TY+ +I G C     E A+ L+ S+   G +P+   +  +MS  C         
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            +  +M ++ +  +   LS+        G   L+ +L +KM   G  P     +++  C
Sbjct: 594 ALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVC 644



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 2/298 (0%)

Query: 245  DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            D+A     +M + ++ P V   N ++   CK   ++ A+ +FK ME+ G  P+V TY++L
Sbjct: 852  DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911

Query: 305  ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
            IS  CN G  S A +  + M +  I P+V TF+ LI  F K+GKL EA +++ EM   ++
Sbjct: 912  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 365  SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             P++VTY++LING+      +    ++E M+      D++TYN LI G CK  + ++   
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 425  LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            + +++ +  LV N  TY+ LI G     + + A +++K M+  G  PN   +  L+   C
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 485  QNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +N   ++A  V+ E L++  M P     + +  G+   GK E    LF  + ++G+ P
Sbjct: 1092 KNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 1148



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 161/324 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G+ P   +    ++      RV  A+    +M      P++   N ++ + CK  
Sbjct: 248 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 307

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + FK +E  G  P+V TY  L++G CN    S A +  + M K  I PNVIT++
Sbjct: 308 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 367

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+  F K GK+ EA  +F EM   ++ P++VTY++LING       +    +++ M+  
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 427

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+++YN LI G CK  + +    L +++ +  LV N  TY+ LI G     + ++A
Sbjct: 428 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 487

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            + +  M   G  P+   + +L+   C N + ++A  +  +M ++ M  D +  + +  G
Sbjct: 488 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 547

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           +   GK E A  LF  + ++GL P
Sbjct: 548 MCKTGKVEEAWSLFCSLSLKGLKP 571



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 163/330 (49%)

Query: 232  NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
            N  +  L   + +D AL  +KEM    I PNV T + ++   C  G    A  +  +M  
Sbjct: 874  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 933

Query: 292  MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
                P V T++ LI     +G L  A K  + M K  I P+++T+++LI GFC   +L E
Sbjct: 934  RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 993

Query: 352  ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            A ++F  M + +  P+VVTYNTLI G+ +    E G  ++ EM + G+  + +TYN LI 
Sbjct: 994  AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 1053

Query: 412  GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            GL + G    A  + K++  + + PN  TY+ L+ G C     E+A  +++ + RS   P
Sbjct: 1054 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 1113

Query: 472  NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
              + + +++   C+    +   ++   +  K + PD +  + + SG    G  E A  LF
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173

Query: 532  RKMEIRGLLPKGFDKLRTINCAPENGEKES 561
            ++M+  G LP        I     +G++E+
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREA 1203



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 155/299 (51%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   + ++ A  K+   +  + + + M+++G   +  TY+
Sbjct: 675 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +PN++T ++L+ G+C   ++ EA  +  +M  T
Sbjct: 735 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN VT+NTLI+G      +    +L + M+  G + D++TY  ++ GLCK G T  A
Sbjct: 795 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 854

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+  +++  L P    Y+ +I G C  K+ + A  L+K M   G RPN   +  L+S 
Sbjct: 855 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C    +  A+ +L +M+E+ + PD    S L       GK   A KL+ +M  R + P
Sbjct: 915 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 157/312 (50%)

Query: 208  KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
            ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P++ T +
Sbjct: 920  RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 979

Query: 268  MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             +++ FC    ++ A ++F+ M S    P V TYNTLI G C    +   M+    M + 
Sbjct: 980  SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 1039

Query: 328  GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            G+  N +T+N LI G  + G    A  IF EM +  V PN++TYNTL++G  + G  E  
Sbjct: 1040 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 1099

Query: 388  ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
              ++E + R+ ++  I TYN +I G+CK GK +    L  +L    + P+   Y+ +I+G
Sbjct: 1100 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 1159

Query: 448  QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
             C + + E A  L+K M   G  PN   +  L+    ++ D + +AE++ EM     A D
Sbjct: 1160 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 1219

Query: 508  SIILSELYSGLH 519
            +  +  + + LH
Sbjct: 1220 ASTIGLVTNMLH 1231



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 2/264 (0%)

Query: 177  KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
            KL+D ++   R  D S + +  L   +    +   A   F  M      P + + N  + 
Sbjct: 961  KLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 1018

Query: 237  SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                 +RV+  +  ++EM +  +  N  T N+++    + G  + A E+FK M S G  P
Sbjct: 1019 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 1078

Query: 297  SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            ++ TYNTL+ G C  G L  AM     ++++ ++P + T+N +I G CK GK+ +   +F
Sbjct: 1079 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 1138

Query: 357  SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
              +    V P+VV YNT+I+G+ + G+ E   +L++EM  +G   +   YN LI    ++
Sbjct: 1139 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 1198

Query: 417  GKTKKAAYLVKDLDKNSLVPNAST 440
            G  + +A L+K++       +AST
Sbjct: 1199 GDREASAELIKEMRSCGFAGDAST 1222



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 179/408 (43%), Gaps = 39/408 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+   D  D  +++FD  L   + C +  + ++ L   +   K+  +    F +M 
Sbjct: 403 SLINGLCLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +     +  VD A  F+ +M    ISP+++T N+++   C  G +E
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 520

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +F++M+       + TY T+I G C  G +  A      +   G++P+++T+ T++
Sbjct: 521 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 580

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C KG LHE   ++++MK   +  N  T +         G+  + A L ++ML  G  
Sbjct: 581 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYA 632

Query: 401 VDILTYNALILGLCKE---------GKTK------------------KAAYLVKDLDKNS 433
             +L    +  G+CK+         GKT                    A  L  ++ K+ 
Sbjct: 633 PSLL--KDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSR 690

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   +S L++        +    L + M   G   N + + +L++ FC+      A 
Sbjct: 691 PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLAL 750

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            VL +M++    P+ + LS L +G  H  +   A+ L  +M + G  P
Sbjct: 751 AVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 798


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 172/356 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +  T   + +  +A D    M+  G LP   + N  +        +  A 
Sbjct: 239 CSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M +N + P+V+T NM+++  C  G IE A ++   ME++  +P V +YNTLI+G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +S A K    M + G++PN +T N ++  +CK+GK+ +A+   ++M+ +  SP+ 
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLINGY + GN        +EM R  +K+D +T N ++  LC+E K ++A  L+  
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             K     +  +Y  LI G     N +RA +L+  M      P+   +  ++   CQ   
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            ++A   L E+LE  + PD    + +  G    G  E A +   KM      P  F
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 178/349 (51%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L     +  +   A     +M +   LP + S N  ++  L+  ++  A    +EM 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN  T N+++  +CK G ++ A      ME  GF P   TYNTLI+G+C  G + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M +  ++ + +T NT++   C++ KL EA ++ S  +      + V+Y TLI
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY + GN +    L++EM    I    +TYN +I GLC+ GKT++A   + +L ++ L+
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ ++ G C   + E+AFQ +  M+ +  +P+     +L+   C     ++A ++
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKL 615

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               + K  A D++  + L + L   G+ + A  L  +ME + L P  +
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 165/353 (46%), Gaps = 2/353 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G L+        KL + +  S +    + +  +++ K Y    K  +A++T  
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEM--SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P   + N  ++    +  +  A     EM R  +  +  TLN ++   C+  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A ++  +    G+     +Y TLI G+   G +  A+K  + M++  I P+ +T+N
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G C+ GK  +A    +E+  + + P+  TYNT+++GY + G+ E     + +M+ N
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             K D+ T N L+ GLC EG  +KA  L           +  TY+ LIT  C     + A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           F L   M      P+ + +  +++    +     A E + +MLEK   PD ++
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVL 700



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 58/319 (18%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  + + +T    KK   A       R  G+     S    +        VD AL  + E
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   I P+  T N ++   C+ G  E+A+     +   G +P  TTYNT++ G+C +G 
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573

Query: 314 LSLAMKFKNLMEKNGIQPNV-----------------------------------ITFNT 338
           +  A +F N M +N  +P+V                                   +T+NT
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNT 633

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   CK+G+L +A  + SEM+   + P+  TYN +I      G          +ML  G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693

Query: 399 ------IKVD-----------------ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 +++D                  + Y+  I  LC EGK K A  +  +  +  + 
Sbjct: 694 NLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGIT 753

Query: 436 PNASTYSALITGQCVRKNS 454
            + STY  L+ G   R+ S
Sbjct: 754 VDKSTYINLMDGLIKRRKS 772


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 174/350 (49%), Gaps = 16/350 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A +  C+M   GF+P   + +K +  L D+ +V+ A   ++EM++N I P+VYT  
Sbjct: 433 KFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYT 492

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK G+I++A   F  M      P+V TY +LI  +     +  A K   +M   
Sbjct: 493 ILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLE 552

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS----------------PNVVTY 371
           G +PNV+T+  LI G CK G++ +A +I++ M+    S                PN++TY
Sbjct: 553 GSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITY 612

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L++G  +    E    L + M  NG + + + Y+ALI G CK GK + A  +   + +
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               PN  TYS+LI      K  +   ++   M+ + C PN  I+  ++   C+    + 
Sbjct: 673 RGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEE 732

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  ++L+M E    P+ I  + +  G    GK E  ++L+R M  +G  P
Sbjct: 733 AYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAP 782



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 170/367 (46%), Gaps = 35/367 (9%)

Query: 203 YAHRKKFRNATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERV----- 244
           Y +R+ F +    +C+ RDY             G  P     N F+ S+  +E +     
Sbjct: 339 YPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDL 398

Query: 245 -DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            ++A   Y EM    +  N   ++      C  G  ++A E+   M S GF+P  +TY+ 
Sbjct: 399 LELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSK 458

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I   C+   +  A      M+KNGI P+V T+  LI  FCK G + +A   F EM   N
Sbjct: 459 VIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDN 518

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            +PNVVTY +LI+ Y +         L+E ML  G K +++TY ALI G CK G+  KA 
Sbjct: 519 CTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKAC 578

Query: 424 YLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +   +                D +   PN  TY AL+ G C     E A +L  +M  +
Sbjct: 579 QIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVN 638

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           GC PN+ +++ L+  FC+    + A EV ++M E+   P+    S L + L    + +L 
Sbjct: 639 GCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLV 698

Query: 528 MKLFRKM 534
           +K+  KM
Sbjct: 699 LKVLSKM 705



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 16/324 (4%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   + +L  ++      + A + F +M      P + +    + + L + +V  A   +
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES--------MGF--------I 295
           + M      PNV T   ++   CK G I++A +++  M+         M F         
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P++ TY  L+ G C    +  A +  + M  NG +PN I ++ LI GFCK GKL  A  +
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F +M      PN+ TY++LIN   +    ++   +  +ML N    +++ Y  +I GLCK
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            GKT++A  L+  +++    PN  TY+A+I G       E+  +LY+ M   GC PN   
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEM 499
           + +L++  C     D A  +L EM
Sbjct: 787 YRVLINHCCSTGLLDEAHRLLDEM 810



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 156/323 (48%), Gaps = 8/323 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  ++  +   +L D++  S   C+ + +V+D L   +    K  NA + F +M 
Sbjct: 614 ALVDGLCKANRVEEAHELLDTM--SVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMS 671

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G+ P + + +  ++SL   +R+D+ L    +M  N  +PNV     ++   CK+G  E
Sbjct: 672 ERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTE 731

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   ME +G  P+V TY  +I G    G +   ++    M   G  PN IT+  LI
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLI 791

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GI 399
              C  G L EA+R+  EMK T    ++ +Y  +I G+ +   + +G  L +E+  N  +
Sbjct: 792 NHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIG--LLDELSENESV 849

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERA 457
            V+ L Y  LI    K G+ + A  L++++  +    V N   Y++LI         ++A
Sbjct: 850 PVESL-YRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKA 908

Query: 458 FQLYKSMIRSGCRPNKHIFEMLM 480
           F+LY SMI     P    F  L+
Sbjct: 909 FELYASMINKNVVPELSTFVHLI 931



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 148/340 (43%), Gaps = 35/340 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I +    +  L  + RV+ A      M  N   PN    + ++  FCK G +E A EV
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEV 666

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G+ P++ TY++LI+    +  L L +K  + M +N   PNV+ +  +I G CK
Sbjct: 667 FVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCK 726

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK  EA R+  +M+     PNV+TY  +I+G+G++G  E    LY +M   G   + +T
Sbjct: 727 VGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 406 YNALILGLCKEGKTKKA-----------------AY----------------LVKDLDKN 432
           Y  LI   C  G   +A                 +Y                L+ +L +N
Sbjct: 787 YRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSEN 846

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFD 490
             VP  S Y  LI         E A  L + +  S      NK+++  L+ +       D
Sbjct: 847 ESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVD 906

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           +A E+   M+ K + P+      L  GL   GK + A++L
Sbjct: 907 KAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 187/450 (41%), Gaps = 42/450 (9%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKN--RKFKSSESILRGILDSDSFDLPSKLFDS 181
           +EFF W       S T   ++ ++ +L  N     + S   L  I D D  +L  KL + 
Sbjct: 117 VEFFLWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDR-ELLRKLLNF 175

Query: 182 IL---------------------YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++                     + Y+   +SP  ++ L + +    K   A     +M 
Sbjct: 176 LIQKCCRNGMWNVALEELGRLKDFGYK---ASPTTYNALIQVFLRADKLDTAFLVHREMS 232

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + GF     +   F  SL  + R   AL     + +    P+    N ++   C+  + +
Sbjct: 233 NSGFRMDGCTLGCFAYSLCKAGRCGDALSL---LEKEEFVPDTVFYNRMVSGLCEASLFQ 289

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++   M S+  IP+V TY  L+SG   KG L    +  ++M   G  PN   FN+L+
Sbjct: 290 EAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLV 349

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE---------MGASLY 391
             +CK      A ++F +M      P  + YN  I   G + ++E         +    Y
Sbjct: 350 HAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFI---GSICSNEELPGSDLLELAEKAY 406

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EML  G+ ++ +  +     LC  GK  KA  ++ ++     VP+ STYS +I   C  
Sbjct: 407 SEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDA 466

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E+AF L++ M ++G  P+ + + +L+ +FC+     +A     EML     P+ +  
Sbjct: 467 SKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTY 526

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L        K   A KLF  M + G  P
Sbjct: 527 TSLIHAYLKARKVFDANKLFEMMLLEGSKP 556


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 194/419 (46%), Gaps = 21/419 (5%)

Query: 142  THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
            T+++V+  LT+    + +  ++ G+         SK   S  Y+       PL+  LL  
Sbjct: 1158 TYNVVITGLTRKGDLEEAAELVEGMR-------LSKKASSFTYN-------PLITGLL-- 1201

Query: 202  TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                R   +   D   +M + G +P + + N  +  LL S  V+ A   + EMR   + P
Sbjct: 1202 ---ARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLP 1258

Query: 262  NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
            +V T N +++ +CK G ++ A+ +F ++   G  P+V TYN LI G+C  G L  A   K
Sbjct: 1259 DVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILK 1318

Query: 322  NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
              M + G  PNV T+  L+ G      L  A   F EM +  + P+   YNT I     +
Sbjct: 1319 EEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELIL 1378

Query: 382  GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            G+      L E ++  GI  D +TYN LI GLCK G  K A  L   +  N L P+  TY
Sbjct: 1379 GDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITY 1438

Query: 442  SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
            + LI   C R     A +++ +MI  G  P+   F +++  +C+  +   A     +MLE
Sbjct: 1439 TCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLE 1498

Query: 502  KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPENGE 558
            + + P+ I  + L   L   G+ +LA   F +M  RGL+   +     I  NC   N E
Sbjct: 1499 EGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWE 1557



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 169/339 (49%), Gaps = 9/339 (2%)

Query: 216  FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
            F +MR  G LP + + N  L+    +  +  AL  + ++RR  ++P V T N+++  +C+
Sbjct: 1248 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 1307

Query: 276  LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            LG +E A  + + M   G +P+V TY  L+ G  N   L++A +F + M   G+QP+   
Sbjct: 1308 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFA 1367

Query: 336  FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            +NT I      G +  A  +   +    +S + VTYN LI+G  + GN +    L  +M+
Sbjct: 1368 YNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 1427

Query: 396  RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             NG++ D +TY  LI   C+ G  ++A  +  ++  + L+P+A T++ +I   C R N  
Sbjct: 1428 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 1487

Query: 456  RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
             A+  ++ M+  G  PN+  + +L+   C+      A+    EMLE+ +  +    + L 
Sbjct: 1488 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 1547

Query: 516  SGLHHCGKDELAMKLFRKMEIRGLLP---------KGFD 545
             G    G  E AM+ + +M   G+ P         KGFD
Sbjct: 1548 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGFD 1586



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 189/423 (44%), Gaps = 84/423 (19%)

Query: 203  YAHRKKFRNAT-DT--------FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            Y+   K R+AT DT        F +M  +G  P ++ CN+ L  L D+ R D     ++E
Sbjct: 1050 YSKECKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEE 1109

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM--GFIPSVTTYNTLISGHCNK 311
            M    I P++ T N ++ +F K G  ++   + K ME+   G +P+  TYN +I+G   K
Sbjct: 1110 MLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 1169

Query: 312  GLLSLAM-------------------------------KFKNL---MEKNGIQPNVITFN 337
            G L  A                                K  +L   ME  GI P V+T+N
Sbjct: 1170 GDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 1229

Query: 338  TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             +I G  + G +  A   F+EM+A  + P+V+TYN+L+NGY + GN +    L+ ++ R 
Sbjct: 1230 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 1289

Query: 398  GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG---------- 447
            G+   +LTYN LI G C+ G  ++A  L +++ +   +PN  TY+ L+ G          
Sbjct: 1290 GLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMA 1349

Query: 448  --------------QCVRKNSE-----------RAFQLYKSMIRSGCRPNKHIFEMLMST 482
                           C   N+            RAF+L + ++  G   +   + +L+  
Sbjct: 1350 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHG 1409

Query: 483  FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
             C+  +   A E+ ++M+   + PD I  + L     HC +  L  A K+F  M   GLL
Sbjct: 1410 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHA--HCERGLLREARKIFNNMISDGLL 1467

Query: 541  PKG 543
            P  
Sbjct: 1468 PSA 1470



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 144/290 (49%)

Query: 194  LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            L +++L   Y        A     +M + G LP + +    +   L+   + +A  F+ E
Sbjct: 1296 LTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDE 1355

Query: 254  MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            M    + P+ +  N  + A   LG I RA E+ + +   G      TYN LI G C  G 
Sbjct: 1356 MLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGN 1415

Query: 314  LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            L  A + +  M  NG+QP+ IT+  LI   C++G L EA +IF+ M +  + P+ VT+  
Sbjct: 1416 LKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTV 1475

Query: 374  LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            +I+ Y + GN       + +ML  G++ + +TYN LI  LC+ G+T+ A++   ++ +  
Sbjct: 1476 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERG 1535

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            LV N  TY+ LI G C   N E A + Y  M ++G  P+    + L+  F
Sbjct: 1536 LVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 174/346 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L+++ +       K   +A + F +M   G  P + + +  +S L +  R   A     +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +I+P+V+T + ++ AF K G +  A +++  M      PS+ TY++LI+G C    
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    M      P+V+T+NTLI GFCK  ++ E   +F EM    +  N VTYN 
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G  Q G+ +M   +++EM+ +G+  +I+TYN L+ GLCK GK +KA  + + L ++ 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P   TY+ +I G C     E  + L+ ++   G +P+   +  ++S FC+    + A 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  EM E    P+S   + L       G  E + +L ++M   G 
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +  R +   A     +M   G+ P I + +  L+    S+R+  A+    +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N ++H          A+ +   M + G  P + TY  +++G C +G   
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA    N ME+  ++P V+ +NT+I G CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L  +M+   I  D+ T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+LI G C+    + A Q+++ M+   C P+   +  L+  FC+ +  +   EV
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM ++ +  +++  + L  GL   G  ++A ++F++M   G+ P
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 2/298 (0%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D+A     +M + ++ P V   N ++   CK   ++ A+ +FK ME+ G  P+V TY++L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           IS  CN G  S A +  + M +  I P+V TF+ LI  F K+GKL EA +++ EM   ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTY++LING+      +    ++E M+      D++TYN LI G CK  + ++   
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + +++ +  LV N  TY+ LI G     + + A +++K M+  G  PN   +  L+   C
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 485 QNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +N   ++A  V+ E L++  M P     + +  G+   GK E    LF  + ++G+ P
Sbjct: 478 KNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 113/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)

Query: 129 WVQTHKPSSLTLET--HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
           +V  ++P+++T  T  H + LH        K+SE++               L D ++   
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLH-------NKASEAM--------------ALIDRMVA-- 214

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C    + + ++      R     A +   +M      P +   N  +  L   + +D 
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  +KEM    I PNV T + ++   C  G    A  +  +M      P V T++ LI 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
               +G L  A K  + M K  I P+++T+++LI GFC   +L EA ++F  M + +  P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYNTLI G+ +    E G  ++ EM + G+  + +TYN LI GL + G    A  + 
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++  + + PN  TY+ L+ G C     E+A  +++ + RS   P  + + +++   C+ 
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              +   ++   +  K + PD +  + + SG    G  E A  LF++M+  G LP     
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574

Query: 547 LRTINCAPENGEKES 561
              I     +G++E+
Sbjct: 575 NTLIRARLRDGDREA 589



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 155/299 (51%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   + ++ A  K+   +  + + + M+++G   +  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +PN++T ++L+ G+C   ++ EA  +  +M  T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN VT+NTLI+G      +    +L + M+  G + D++TY  ++ GLCK G T  A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+  +++  L P    Y+ +I G C  K+ + A  L+K M   G RPN   +  L+S 
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C    +  A+ +L +M+E+ + PD    S L       GK   A KL+ +M  R + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 139/282 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  +     F  L   +    K   A   + +M      P I + +  ++     +R+D 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ M      P+V T N ++  FCK   +E  +EVF+ M   G + +  TYN LI 
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G   +A +    M  +G+ PN++T+NTL+ G CK GKL +A  +F  ++ + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TYN +I G  + G  E G  L+  +   G+K D++ YN +I G C++G  ++A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           K++ ++  +PN+  Y+ LI  +    + E + +L K M   G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 157/312 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P++ T +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A ++F+ M S    P V TYNTLI G C    +   M+    M + 
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+N LI G  + G    A  IF EM +  V PN++TYNTL++G  + G  E  
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + R+ ++  I TYN +I G+CK GK +    L  +L    + P+   Y+ +I+G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C + + E A  L+K M   G  PN   +  L+    ++ D + +AE++ EM     A D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605

Query: 508 SIILSELYSGLH 519
           +  +  + + LH
Sbjct: 606 ASTIGLVTNMLH 617



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D S + +  L   +    +   A   F  M      P + + N  + 
Sbjct: 347 KLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                +RV+  +  ++EM +  +  N  T N+++    + G  + A E+FK M S G  P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++ TYNTL+ G C  G L  AM     ++++ ++P + T+N +I G CK GK+ +   +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V P+VV YNT+I+G+ + G+ E   +L++EM  +G   +   YN LI    ++
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G  + +A L+K++       +AST
Sbjct: 585 GDREASAELIKEMRSCGFAGDAST 608


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/420 (27%), Positives = 204/420 (48%), Gaps = 19/420 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSSPLV 195
           L T+SI ++   +  +   + ++L  ++    + D   L S L +   +S R+ D+  LV
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS-LLNGYCHSKRISDAVALV 176

Query: 196 FDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
             ++          F T  H      K   A     QM   G  P + +    ++ L   
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +D+AL   K+M + +I  +V   N ++   CK   ++ A+ +F  M++ G  P V TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           ++LIS  CN G  S A +  + M +  I PNV+TF+ LI  F K+GKL EA +++ EM  
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            ++ P++ TY++LING+      +    ++E M+      +++TY+ LI G CK  + ++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
              L +++ +  LV N  TY+ LI G    ++ + A  ++K M+  G  PN   + +L+ 
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+N    +A  V   +    M PD    + +  G+   GK E   +LF  + ++G+ P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 176/350 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++++ +       K   +A + F +M + G  P + + +  +S L +  R   A  
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PNV T + ++ AF K G +  A +++  M      P + TY++LI+G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A     LM      PNV+T++TLI GFCK  ++ E   +F EM    +  N V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI+G+ Q  + +    ++++M+  G+  +ILTYN L+ GLCK GK  KA  + + L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            ++++ P+  TY+ +I G C     E  ++L+ ++   G  PN   +  ++S FC+    
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           + A  +L +M E    P+S   + L       G  E + +L ++M   G 
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 5/391 (1%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKF 209
           R F S+    R IL +   D+  K+ D++     M  S P    + F+ L    A   KF
Sbjct: 41  RSFASASGDYREILRNRLSDII-KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
                   QM+  G    + + + F++      ++ +AL    +M +    P++ TL+ +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ +C    I  AV +   M  MG+ P   T+ TLI G       S A+   + M + G 
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QP+++T+ T++ G CK+G +  A  +  +M+   +  +VV YNT+I+G  +  + +   +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ EM   GI+ D+ TY++LI  LC  G+   A+ L+ D+ +  + PN  T+SALI    
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                  A +LY  MI+    P+   +  L++ FC ++  D A  +   M+ K   P+ +
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             S L  G     + E  M+LFR+M  RGL+
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 159/314 (50%)

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L D  +VD A+  + +M ++R  P++   N ++ A  K+   E  + + + M+++G    
Sbjct: 58  LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TY+  I+  C +  LSLA+     M K G +P+++T ++L+ G+C   ++ +A  +  
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +M      P+  T+ TLI+G      +    +L ++M++ G + D++TY  ++ GLCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               A  L+K ++K  +  +   Y+ +I G C  K+ + A  L+  M   G RP+   + 
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+S  C    +  A+ +L +M+E+ + P+ +  S L       GK   A KL+ +M  R
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357

Query: 538 GLLPKGFDKLRTIN 551
            + P  F     IN
Sbjct: 358 SIDPDIFTYSSLIN 371



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 156/312 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P+++T +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A  +F+ M S    P+V TY+TLI G C    +   M+    M + 
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+ TLI GF +      A  +F +M +  V PN++TYN L++G  + G     
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + R+ ++ DI TYN +I G+CK GK +    L  +L    + PN   Y+ +I+G
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C + + E A  L K M   G  PN   +  L+    ++ D + +AE++ EM     A D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607

Query: 508 SIILSELYSGLH 519
           +  +  + + LH
Sbjct: 608 ASTIGLVTNMLH 619



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 133/264 (50%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D     +  L   +    +   A   F  M      P + + +  + 
Sbjct: 349 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RV+  +  ++EM +  +  N  T   ++H F +    + A  VFK M S+G  P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++ TYN L+ G C  G L+ AM     ++++ ++P++ T+N +I G CK GK+ +   +F
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    VSPNV+ YNT+I+G+ + G+ E   SL ++M  +G   +  TYN LI    ++
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G  + +A L+K++       +AST
Sbjct: 587 GDREASAELIKEMRSCGFAGDAST 610



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 108/222 (48%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ FN L+    K  K      +  +M+   +S ++ TY+  IN + +     +  ++
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + DI+T ++L+ G C   +   A  LV  + +    P+  T++ LI G  +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M++ GC+P+   +  +++  C+  D D A  +L +M +  +  D +I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            + +  GL      + A+ LF +M+ +G+ P  F     I+C
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   +   +   +LF  +  S R    + + +  L   +   +   NA   F QM 
Sbjct: 403 TLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + N  L  L  + ++  A+  ++ ++R+ + P++YT N+++   CK G +E
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              E+F N+   G  P+V  YNT+ISG C KG    A      M+++G  PN  T+NTLI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++   + +  T   + N
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 210/436 (48%), Gaps = 19/436 (4%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           ++ +FF WV+T +    ++   + ++ +L   R+F  +E +L  +  S  + L  ++F  
Sbjct: 1   MAYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKS-RYILQPRIFIE 59

Query: 182 ILYSY--------------RM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
           +   Y              RM    C  +   ++ L   +      + A   +  M   G
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P   + N  +++   ++RVD     ++EM+    SPNV T ++++ A CK G +E+A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           +VF +M+S G  P++ TY ++I G    G +  A      M   G+    + +N+LI G 
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGL 239

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
            + G+   A ++F EM +  + P+ VT+ +L+ G G  G +     +++E    G  +D+
Sbjct: 240 GRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDV 299

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
             YN LI  LCK  +  +A  +  +L+++ LVP+  T++AL+ G C       AF L   
Sbjct: 300 NLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGD 359

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M R+GC P+  ++  L+    ++   + A ++LLEM      PD +  + L       G+
Sbjct: 360 MKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGR 419

Query: 524 DELAMKLFRKMEIRGL 539
            E A++LF ++  +G 
Sbjct: 420 IEDALRLFEEISAKGF 435



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 5/200 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L  T    K+   A + F ++ + G +P + + N  +  L  S R+  A     +M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +R   +P+V   N ++    K G +E A ++   M+S+G+ P V TYNTLI   C  G +
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS----PNVVT 370
             A++    +   G   N +T+NT++ G C  G++ EA ++F+ MK   V     P+ VT
Sbjct: 421 EDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVT 479

Query: 371 YNTLINGYGQVGNSEMGASL 390
           Y TL+NG  Q G SE+  SL
Sbjct: 480 YTTLLNGARQAGLSELANSL 499



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%)

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L  G    G  +K+   +K ++ +     AS Y++LI        +++A  +Y+ M +SG
Sbjct: 60  LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSG 119

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            RP+ + F +LM+ F + +  D   ++  EM  +  +P+ I  S L   +  CG  E A+
Sbjct: 120 LRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKAL 179

Query: 529 KLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           K+F  M+ RG  P  F     I+   ++G
Sbjct: 180 KVFLDMKSRGCRPNIFTYTSMIDGLGKSG 208


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 172/368 (46%), Gaps = 22/368 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ SP +F+ L  TY + + +  A   F +M   G  P     N F+ S+   E +    
Sbjct: 337 CNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPE 396

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D+A   Y+EM       N           C +G  E+A ++ K M   GF+P  +TY 
Sbjct: 397 LLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYT 456

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C    +  A      M+K G+ P+V T+  LI  FCK G + +A   F EM++ 
Sbjct: 457 KVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSA 516

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SPNVVTY  L++ Y +         ++  M+ +    + +TY+ALI GLCK G+ +KA
Sbjct: 517 GCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKA 576

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                D +++ PN  TY AL+ G C  +    A  L  +M+ 
Sbjct: 577 CEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLA 636

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           +GC PN+ +++ L+  FC+  + D A EV L M +    P     + L   +   G+ +L
Sbjct: 637 AGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDL 696

Query: 527 AMKLFRKM 534
           AMK+  +M
Sbjct: 697 AMKVLSQM 704



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A     +M   GF+P   +  K ++ L  ++RVD A   ++EM++  ++P+VYT  
Sbjct: 432 KFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYT 491

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK G+IE+A   F  M S G  P+V TY  L+  +     L  A    + M  +
Sbjct: 492 ILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGD 551

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN----------------VSPNVVTY 371
              PN IT++ LI G CK G++ +A  +++++  T+                +SPNVVTY
Sbjct: 552 ACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTY 611

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L+NG  +         L + ML  G + + + Y+AL+ G CK G+   A  +   + K
Sbjct: 612 GALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTK 671

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              +P+  TY++LI         + A ++   M++  C PN   +  ++   C+  + ++
Sbjct: 672 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEK 731

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +L  M +K  +P+ +  + L  GL   GK +  ++LF +M+ +G  P
Sbjct: 732 ALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAP 781



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 147/305 (48%), Gaps = 16/305 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  ++        A   F +MR  G  P + +    L + L S+++  A   +  M 
Sbjct: 490 YTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV 549

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFK-------NMESMGFI---------PSVT 299
            +   PN  T + ++   CK G I++A EV+        N+ES  +          P+V 
Sbjct: 550 GDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVV 609

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  L++G C    +S A    + M   G +PN I ++ L+ GFCK G++  A  +F  M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P+V TY +LI+   + G  ++   +  +ML++    +++TY A++ GLCK G+T
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +KA  L+  ++K    PN  TY+ALI G       +   +L+  M   GC PN   + +L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 480 MSTFC 484
           ++  C
Sbjct: 790 INHCC 794



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 148/320 (46%), Gaps = 7/320 (2%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    ++ L  +++V  A      M      PN    + ++  FCK+G I+ A EV
Sbjct: 606 PNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEV 665

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G++PSV TY +LI      G L LAMK  + M K+   PNV+T+  ++ G CK
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCK 725

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  +A  + S M+    SPNVVTY  LI+G G+ G  + G  L+ +M   G   + +T
Sbjct: 726 TGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVT 785

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C  G    A  L+ ++ +         Y   + G    K    +  L + M 
Sbjct: 786 YRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQG--FSKRFLASLGLLEEME 843

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC----MAPDSIILSELYSGLHHC 521
                P   ++ ML+ +F +    + A E+  EM+E      MA   +  S L   L   
Sbjct: 844 SHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTS-LIQALCLS 902

Query: 522 GKDELAMKLFRKMEIRGLLP 541
            + E A+ L+ +M  RG++P
Sbjct: 903 SQVEEAVALYSEMRRRGIVP 922



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 180/434 (41%), Gaps = 62/434 (14%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L + FF W +       T   +  +  +L      +++E +LR I + D  D+  +L + 
Sbjct: 116 LCVRFFLWAERQVGYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDR-DVLGRLLNV 174

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++   R C    L              +  A +   +++D+G+ P   + N  +  L  +
Sbjct: 175 LV---RRCCLQGL--------------WGEALEELGRLKDFGYRPSAVTYNALVQVLASA 217

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            +V++A    KEM  +    +  T+     A CK G    A+++   +E   F       
Sbjct: 218 GQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLC 274

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI------ 355
             +ISG     L + AM F + M  N   PNV+T+ TL+ GF KK +L    RI      
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMT 334

Query: 356 -----------------------------FSEMKATNVSPNVVTYNTLIN---GYGQVGN 383
                                        F+ M      P  V YN  I    G  ++ N
Sbjct: 335 EGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPN 394

Query: 384 SE---MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            E   +   +YEEML     ++ +        LC  GK +KA  +VK++ +   VP+AST
Sbjct: 395 PELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDAST 454

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ +IT  C  K  ++AF L++ M + G  P+ + + +L+ +FC+    ++A     EM 
Sbjct: 455 YTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMR 514

Query: 501 EKCMAPDSIILSEL 514
               +P+ +  + L
Sbjct: 515 SAGCSPNVVTYTAL 528



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 155/338 (45%), Gaps = 7/338 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +        L D++L +   C+ + +V+D L   +    +  +A + F +M 
Sbjct: 613 ALVNGLCKAQKVSDAHDLLDAMLAA--GCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMT 670

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+LP + +    +  +    R+D+A+    +M ++  +PNV T   ++   CK G  E
Sbjct: 671 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETE 730

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +   ME  G  P+V TY  LI G    G +   ++    M+  G  PN +T+  LI
Sbjct: 731 KALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILI 790

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C  G L +A+ +  EMK T+    +  Y T + G+ +   + +G  L EEM  +   
Sbjct: 791 NHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLG--LLEEMESHDTA 848

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST---YSALITGQCVRKNSERA 457
                Y  LI    K G+ + A  L K++ + S   N ++   +++LI   C+    E A
Sbjct: 849 PIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEA 908

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
             LY  M R G  P+   F  L+    +   ++ A ++
Sbjct: 909 VALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 221/464 (47%), Gaps = 27/464 (5%)

Query: 96  KLTALSTHLTPFRVKHVLLKV--QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           K +AL  HL+P +   +   +  + + +  L FF +         T+ ++  ++ +L ++
Sbjct: 63  KCSALLPHLSPSQFDQLFFSIGLKANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRS 122

Query: 154 RKFKSSESILRGI---------LDSDSF--DLPSKLFD--SILYSYRMCDSSPLVFDLLF 200
           +    +  +L  +         LDS+ F  ++ + LF   S++  +    +    FDLL 
Sbjct: 123 KFIPPARLLLIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQA----FDLLI 178

Query: 201 KTYAHRKKFRN-----ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
             Y+   +FRN     A D F  +   G  P +++CN  LSSL+ +   +     ++ M 
Sbjct: 179 HVYS--TQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMS 236

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+V++   V++A CK G +E A+E+F  ME +G  P+V TYN +I+G C  G L 
Sbjct: 237 EGA-CPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLD 295

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A + K  M   G+QPN+ T+  LI G  K     + N +  EM  +  +PNVV +N LI
Sbjct: 296 NAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLI 355

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY ++GN E    + + M+   I    +T  +L+ G CK  + + A   ++++  + L 
Sbjct: 356 DGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLS 415

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +     +++   C +     AF+  K M+    RP+  +  ML+   C++     A E+
Sbjct: 416 IHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATEL 475

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              +LEK      +  + L  GL   GK   A ++ ++M  RGL
Sbjct: 476 WFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGL 519



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 138/277 (49%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N ++H  C  G +  A  + K M   G      TYN LI G CN+G +    + +  M
Sbjct: 490 TSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            K GIQP++ T+N L+ G C  GKL +A +++ E KA+ +  N+ TY  ++ GY +    
Sbjct: 550 TKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRI 609

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E   +L+ E+L   ++++ + YN +I   C+ G    A  L++++    ++PN +TYS+L
Sbjct: 610 EDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 669

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C     E A  L   M + G  PN   +  L+  +C+    D A    LEM+   +
Sbjct: 670 IHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P+    + +  G    G  E A  L  KM+  G++P
Sbjct: 730 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP 766



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 165/348 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S L+  +L        K   AT+ + ++ + G      + N  +  L  + ++  A    
Sbjct: 452 SDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIV 511

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           KEM    +  +  T N ++  FC  G +E    + + M   G  P + TYN L+ G CN 
Sbjct: 512 KEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNV 571

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A+K  +  + +G+  N+ T+  ++ G+CK  ++ +   +F+E+ +  +  N + Y
Sbjct: 572 GKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVY 631

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I  + Q GN      L E M   GI  +  TY++LI G+C  G  + A +L+ ++ K
Sbjct: 632 NIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK 691

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              VPN   Y+ALI G C     + A   +  MI     PNK  + +++  +C+  + ++
Sbjct: 692 EGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEK 751

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           A  +L++M E  + PD +  + L +G       + A K+  +M   GL
Sbjct: 752 ANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 799



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 140/286 (48%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    +  +V+      +EM +  I P++YT N ++   C +G ++ A++++   ++
Sbjct: 527 NALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA 586

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G I ++ TY  ++ G+C    +       N +    ++ N I +N +I   C+ G +  
Sbjct: 587 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 646

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++   MK+  + PN  TY++LI+G   +G  E    L +EM + G   +++ Y ALI 
Sbjct: 647 ALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIG 706

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK G+   A     ++   ++ PN  TY+ +I G C   N E+A  L   M  SG  P
Sbjct: 707 GYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP 766

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           +   + +L + FC+  D D A +V  +M  + +  D I  + L  G
Sbjct: 767 DVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 128/252 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +   +  K  +A   + + +  G +  I +    +     + R++     + E+ 
Sbjct: 561 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 620

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             ++  N    N+++ A C+ G +  A+++ +NM+S G +P+  TY++LI G CN GL+ 
Sbjct: 621 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVE 680

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M K G  PNV+ +  LI G+CK G++  A   + EM + N+ PN  TY  +I
Sbjct: 681 DAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMI 740

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY ++GN E   +L  +M  +GI  D++TYN L  G CK      A  +   +    L 
Sbjct: 741 DGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLP 800

Query: 436 PNASTYSALITG 447
            +  TY+ L+ G
Sbjct: 801 VDEITYTTLVHG 812



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 145/324 (44%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P +   N  +        ++ AL     M    I+P   TL  +M  FCK  
Sbjct: 338 EMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 397

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            IE A    + + S G         +++   C K     A +F  +M     +P+ +   
Sbjct: 398 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 457

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G CK GK  EA  ++  +       + VT N LI+G    G     + + +EML  
Sbjct: 458 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 517

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+ +D +TYNALILG C EGK +    L +++ K  + P+  TY+ L+ G C     + A
Sbjct: 518 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 577

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+     SG   N H + ++M  +C+    +    +  E+L K M  +SI+ + +   
Sbjct: 578 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA 637

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G    A++L   M+ +G+LP
Sbjct: 638 HCQNGNVAAALQLLENMKSKGILP 661



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 171/388 (44%), Gaps = 6/388 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
            K+  +++ G++  + FD  + + D ++ S    + + +VF+ L   Y        A   
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGF--NPNVVVFNNLIDGYCKMGNIEGALKI 370

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
              M      P   +    +     S++++ A    +E+  + +S +      V+H  CK
Sbjct: 371 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 430

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--LLSLAMKFKNLMEKNGIQPNV 333
                 A    K M S  F PS      L+ G C  G  L +  + F+ L+EK G   + 
Sbjct: 431 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFR-LLEK-GSPASK 488

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T N LI G C  GKL EA+RI  EM    +  + +TYN LI G+   G  E    L EE
Sbjct: 489 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 548

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M + GI+ DI TYN L+ GLC  GK   A  L  +   + L+ N  TY  ++ G C    
Sbjct: 549 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 608

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E    L+  ++      N  ++ +++   CQN +   A ++L  M  K + P+    S 
Sbjct: 609 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 668

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G+ + G  E A  L  +M   G +P
Sbjct: 669 LIHGVCNIGLVEDAKHLIDEMRKEGFVP 696



 Score = 92.0 bits (227), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 2/217 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   ++  +    LF+ +L S +M + + +V++++ K +        A      M+ 
Sbjct: 599 MMEGYCKANRIEDVENLFNELL-SKKM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 656

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G LP   + +  +  + +   V+ A     EMR+    PNV     ++  +CKLG ++ 
Sbjct: 657 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 716

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A   +  M S    P+  TY  +I G+C  G +  A      M+++GI P+V+T+N L  
Sbjct: 717 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 776

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           GFCK   +  A ++  +M    +  + +TY TL++G+
Sbjct: 777 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 100/225 (44%), Gaps = 13/225 (5%)

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F  +      P++ T N L++   +    E    ++  M   G   D+ ++  +I 
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACPDVFSFTNVIN 251

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LCK GK + A  L   ++K  + PN  TY+ +I G C     + AF+L + M   G +P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  L++   +   FD+   VL EM+     P+ ++ + L  G    G  E A+K+ 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 532 RKMEIRGLLP---------KGFDKLRTINCAPENGEKE--SGGLS 565
             M  + + P         +GF K   I  A EN  +E  S GLS
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHA-ENALEEILSSGLS 415


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 205/439 (46%), Gaps = 19/439 (4%)

Query: 106 PFRVKHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           P   KHV  ++K QKD + +LE F  ++       TL T+  V+  L    KF++ E +L
Sbjct: 4   PLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
                    D+   + + +L           V+    K Y  + K + A + F +M  Y 
Sbjct: 64  --------VDMRENVGNHMLEG---------VYVGAMKNYGRKGKVQEAVNVFERMDFYD 106

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P + S N  +S L+DS   D A   Y  MR   I+P+VY+  + M +FCK      A+
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +  NM S G   +V  Y T++ G   +   +   +    M  +G+   + TFN L+   
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CKKG + E  ++  ++    V PN+ TYN  I G  Q G  +    +   ++  G K D+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYN LI GLCK  K ++A   +  +    L P++ TY+ LI G C     + A ++   
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
            + +G  P++  +  L+   C   + +RA  +  E L K + P+ I+ + L  GL + G 
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406

Query: 524 DELAMKLFRKMEIRGLLPK 542
              A +L  +M  +GL+P+
Sbjct: 407 ILEAAQLANEMSEKGLIPE 425



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 189/399 (47%), Gaps = 18/399 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           SL L T + +L +L K    K  E +L  ++      LP+      L++Y          
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV--LPN------LFTY---------- 254

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +L  +    R +   A      + + G  P + + N  +  L  + +   A  +  +M  
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             + P+ YT N ++  +CK G+++ A  +  +    GF+P   TY +LI G C++G  + 
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+   N     GI+PNVI +NTLI G   +G + EA ++ +EM    + P V T+N L+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  ++G       L + M+  G   DI T+N LI G   + K + A  ++  +  N + P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++L+ G C     E   + YK+M+  GC PN   F +L+ + C+    D A  +L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            EM  K + PD++    L  G    G  + A  LFRKME
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 154/331 (46%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           + F +M   G    + + NK L  L     V        ++ +  + PN++T N+ +   
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+ G ++ AV +   +   G  P V TYN LI G C       A  +   M   G++P+ 
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T+NTLI G+CK G +  A RI  +       P+  TY +LI+G    G +    +L+ E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            L  GIK +++ YN LI GL  +G   +AA L  ++ +  L+P   T++ L+ G C    
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  L K MI  G  P+   F +L+  +      + A E+L  ML+  + PD    + 
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L +GL    K E  M+ ++ M  +G  P  F
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 206/444 (46%), Gaps = 31/444 (6%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
           Q  KP  +T   ++ +++ L KN KF+ +E  L G + ++  +  S  +++++  Y  C 
Sbjct: 280 QGPKPDVIT---YNNLIYGLCKNSKFQEAEVYL-GKMVNEGLEPDSYTYNTLIAGY--CK 333

Query: 191 ------SSPLVFDLLFKTYAHRK-KFRNATDTFCQMRDY-------------GFLPIIES 230
                 +  +V D +F  +   +  +R+  D  C   +              G  P +  
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  +  L +   +  A     EM    + P V T N++++  CK+G +  A  + K M 
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           S G+ P + T+N LI G+  +  +  A++  ++M  NG+ P+V T+N+L+ G CK  K  
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +    +  M     +PN+ T+N L+    +    +    L EEM    +  D +T+  LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNAS-TYSALITGQCVRKNSERAFQLYKSMIRSGC 469
            G CK G    A  L + +++   V +++ TY+ +I     + N   A +L++ M+    
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--A 527
            P+ + + +++  FC+  + +   + LLEM+E    P    L  + + L  C +D +  A
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL--CVEDRVYEA 691

Query: 528 MKLFRKMEIRGLLPKGFDKLRTIN 551
             +  +M  +GL+P+  + +  ++
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVD 715



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 139/289 (48%)

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           M  + + G ++ AV VF+ M+     P+V +YN ++S   + G    A K    M   GI
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+V +F   +  FCK  + H A R+ + M +     NVV Y T++ G+ +      G  
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ +ML +G+ + + T+N L+  LCK+G  K+   L+  + K  ++PN  TY+  I G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R   + A ++   +I  G +P+   +  L+   C+N  F  A   L +M+ + + PDS 
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             + L +G    G  +LA ++       G +P  F     I+     GE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 9/283 (3%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P I + N  +       +++ AL     M  N + P+VYT N +++  CK    E  
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E +K M   G  P++ T+N L+   C    L  A+     M+   + P+ +TF TLI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575

Query: 343 FCKKGKLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           FCK G L  A  +F +M+ A  VS +  TYN +I+ + +  N  M   L++EM+   +  
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY  ++ G CK G        + ++ +N  +P+ +T   +I   CV      A  + 
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE--VLLEMLEK 502
             M++ G  P        ++T C  +  + AA   VL ++L+K
Sbjct: 696 HRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDLLKK 732


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 198/414 (47%), Gaps = 48/414 (11%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRN----AT 213
           +LRG      F +  ++ D++ +   M  SS  V    ++L+ K      K  N    A 
Sbjct: 108 LLRG------FFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAM 161

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERV--------------DI------------- 246
           + F +M+  G  P +ES +  LS+L DS R+              DI             
Sbjct: 162 EFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKI 221

Query: 247 -----ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
                A    KE+ +    PNV+T +++++ +CKL  +E A EVF  M     +P+  T+
Sbjct: 222 GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTF 281

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK-GKLHEANRIFSEMK 360
           NTLI+G C  G+L  A+K    MEK G +  ++T+NTLI   CKK G ++ A  +F++++
Sbjct: 282 NTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLE 341

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              ++P +VTYN+LI G+            ++EM       +++TY+ LI GLCK  + K
Sbjct: 342 GAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRMK 400

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +AA  ++D+  +   P   TY  LI G C     + A   ++ M  +GC PN  IF  L+
Sbjct: 401 EAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLI 460

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              C+ E  +    +L  M  +   PD I  + L SGL    + E A +LF  M
Sbjct: 461 DGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/302 (31%), Positives = 151/302 (50%), Gaps = 5/302 (1%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           + R++ A+ F+KEM+ + + P++ + ++++ A    G +  A  +F  M      P + T
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMT 210

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN L+ G+C  G    A      + K G +PNV T++ +I  +CK  K+ EA  +F +M 
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE-GKT 419
            +N  PN VT+NTLI G+ + G  E    L+ EM + G K  I+TYN LI  LCK+ G  
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L   L+   L P   TY++LI G C  +    A Q +  M    C PN   + +L
Sbjct: 331 YTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSIL 389

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+      AA+ L +M      P  +    L +G   CG+ + A+  F KM++ G 
Sbjct: 390 IDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGC 449

Query: 540 LP 541
            P
Sbjct: 450 AP 451



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 20/389 (5%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFD-- 180
           ++EFF  ++        LE++ I+L  L+ + +   + ++   +  S      + L D  
Sbjct: 160 AMEFFKEMKASGVEP-DLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGY 218

Query: 181 ----------SILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
                     S++         P VF   ++   Y    K   A + F +M +   +P  
Sbjct: 219 CKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNA 278

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIERAVEVFK 287
            + N  ++    +  ++ A+  + EM +      + T N ++ + CK  G +  AV++F 
Sbjct: 279 VTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFN 338

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            +E  G  P++ TYN+LI G C+   LS AM++ + ME     PNVIT++ LI G CK  
Sbjct: 339 KLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVR 397

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           ++ EA +   +MKA   +P VVTY  LING+ + G  +     +E+M   G   + + +N
Sbjct: 398 RMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFN 457

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI GLCK  +      L+  +      P+  TY+ LI+G C     E A +L+  M   
Sbjct: 458 TLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM--- 514

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
            C PN   F  L+   C  +  + A  +L
Sbjct: 515 ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/311 (29%), Positives = 163/311 (52%), Gaps = 7/311 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LS L+ + + D AL  +KE+     +PN +T N+++  FCK G + +AV VF +M+S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P+ +T NTL+ G C  G +S A+K    M+     P   + N L+ GF   G++ +
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS----EMGASLYEEMLRNGIKVDILTYN 407
           A     +M+ ++ S    TYN ++ G      S    E     ++EM  +G++ D+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+  L   G+  +A  L   +   +  P+  TY+ L+ G C    +  A  L K ++++
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  PN   + ++++ +C+ +  + A EV ++M+E    P+++  + L +G    G  E A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 528 MKLFRKMEIRG 538
           +KLF +ME  G
Sbjct: 298 IKLFAEMEKIG 308



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 185/380 (48%), Gaps = 10/380 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G++ +   D   +LF  +L    +   +   +++L + +    +   A   F  M+
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAG--LFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMK 59

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G LP   + N  L  L +  ++  AL  ++EM+     P   + N+++  F   G + 
Sbjct: 60  SSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHC--NKGL--LSLAMKFKNLMEKNGIQPNVITF 336
            A+   ++M       +  TYN ++ G C  NK    L  AM+F   M+ +G++P++ ++
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           + L+      G++ EA+ +FS M     SP+++TYN L++GY ++G +    SL +E+L+
Sbjct: 180 HILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G + ++ TY+ +I   CK  K ++A  +   + +++ VPNA T++ LI G C     E 
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELY 515
           A +L+  M + GC+     +  L+ + C+       A  L   LE   + P  +  + L 
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 516 SGLHHCGKDELAMKLFRKME 535
            G     +   AM+ F +ME
Sbjct: 357 QGFCDARRLSEAMQYFDEME 376



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 160/324 (49%), Gaps = 10/324 (3%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P   + N  +       ++  A+  + +M+ + + PN  T+N ++   C++G +  A+
Sbjct: 28  FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F+ M++  F+P+  ++N L+ G    G +  A+     M K+       T+N ++ G 
Sbjct: 88  KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147

Query: 344 CKKGK----LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           C + K    L +A   F EMKA+ V P++ +Y+ L++     G      +L+  M     
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---C 204

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI+TYN L+ G CK G+T +A  L+K++ K    PN  TYS +I   C     E A++
Sbjct: 205 SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL--SELYSG 517
           ++  MI S C PN   F  L++ FC+    + A ++  EM EK     +I+   + + S 
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSL 323

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G    A+ LF K+E  GL P
Sbjct: 324 CKKRGGVYTAVDLFNKLEGAGLTP 347



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%)

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +AL++G    +  ++A +L+K ++     PN H + +L+  FC+     +A  V  +M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + P++  ++ L  GL   G+   A+KLFR+M+    LP
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLP 100


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 173/340 (50%), Gaps = 1/340 (0%)

Query: 203  YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
            Y        A    C+M + GF+    +    +++  +   V+ A+ F+ ++ +  +SPN
Sbjct: 841  YCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPN 900

Query: 263  VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FK 321
            +   + ++   CK G +++A E+ + M   G+ P+V T+ +LI G C KG    A + F 
Sbjct: 901  LINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFL 960

Query: 322  NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             L+  +  +PNV T+  +I G+CK+ KL  A  +F  MK   + PN  TY TLI+G+ + 
Sbjct: 961  KLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKA 1020

Query: 382  GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            GN      L E M   G   +  TYN+++ GLCK G+ ++A  L+    +N +  +  TY
Sbjct: 1021 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 1080

Query: 442  SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
            + LI+ QC R +  +A      M + G +P+ H++  L++ FC+      + ++  E+++
Sbjct: 1081 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 1140

Query: 502  KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +AP     + +  G     K  LA+K F+KM   G  P
Sbjct: 1141 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 1180



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 1/345 (0%)

Query: 198  LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L+   +  +     A   F ++   G  P + + +  +S L     V  A    +EM +N
Sbjct: 871  LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 930

Query: 258  RISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               PNVYT   ++H  CK G  ERA  +F K + S  + P+V TY  +ISG+C +  LS 
Sbjct: 931  GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 990

Query: 317  AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            A      M++ G+ PN  T+ TLI G CK G   +A  +   M      PN  TYN++++
Sbjct: 991  AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 1050

Query: 377  GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            G  + G +E    L     +N I+ D +TY  LI   CK     +A   +  + K    P
Sbjct: 1051 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 1110

Query: 437  NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
            +   Y+ LI   C +   + + +L+  +I+ G  P K  +  ++  +C+ +    A +  
Sbjct: 1111 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 1170

Query: 497  LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +M +   APDSI    L SGL    + + A +L+  M  +GL P
Sbjct: 1171 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 1215



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 5/350 (1%)

Query: 195  VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            V + +   +A   K + A D    MR+ G +      N+ +    +   V+ A   + EM
Sbjct: 763  VVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM 822

Query: 255  RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                + P+  T   ++  +C+ G +  A      M   GF+    T   +I+  C K L+
Sbjct: 823  SARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLV 882

Query: 315  SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            + A+ F + + K G+ PN+I ++++I G CK+G + +A  +  EM      PNV T+ +L
Sbjct: 883  NRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 942

Query: 375  INGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+G  + G +E    L+ +++R +  K ++ TY A+I G CKE K  +A  L + + +  
Sbjct: 943  IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQG 1002

Query: 434  LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            LVPN +TY+ LI G C   N  +A++L + M   G  PN   +  ++   C+    + A 
Sbjct: 1003 LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAF 1062

Query: 494  EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            ++L    +  +  D +  + L S    C + ++  A+    KM   G  P
Sbjct: 1063 KLLNTGFQNQIEADGVTYTILIS--EQCKRADMNQALVFLNKMFKVGFQP 1110



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 219  MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
            +R   + P + +    +S     E++  A   ++ M+   + PN  T   ++   CK G 
Sbjct: 963  IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 1022

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
              +A E+ + M + GF P+  TYN+++ G C +G    A K  N   +N I+ + +T+  
Sbjct: 1023 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 1082

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            LI   CK+  +++A    ++M      P++  Y TLI  + +    +    L++E+++ G
Sbjct: 1083 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 1142

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            +     TY ++I G C+E K   A    + +  +   P++ +Y ALI+G C     + A 
Sbjct: 1143 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 1202

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            QLY +MI  G  P +     L   +C+ EDF  +A V+LE L K
Sbjct: 1203 QLYDTMIDKGLSPCEVTRVTLTYEYCKTEDF-ASAMVILERLNK 1245



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 110/257 (42%), Gaps = 3/257 (1%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +  L   +     F  A +    M + GF P   + N  +  L    R + A        
Sbjct: 1010 YTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGF 1069

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +N+I  +  T  +++   CK   + +A+     M  +GF P +  Y TLI+  C + ++ 
Sbjct: 1070 QNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMK 1129

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             + K  + + K G+ P   T+ ++I G+C++ K+  A + F +M     +P+ ++Y  LI
Sbjct: 1130 DSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALI 1189

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            +G  +    +    LY+ M+  G+    +T   L    CK      A  +++ L+K   +
Sbjct: 1190 SGLCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWI 1249

Query: 436  PNASTYSALITGQCVRK 452
                T   LI   C  K
Sbjct: 1250 ---RTVHTLIRKLCCEK 1263



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 3/220 (1%)

Query: 190  DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            ++  + + +L      R     A     +M   GF P I      +++      +  +  
Sbjct: 1074 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 1133

Query: 250  FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             + E+ +  ++P   T   ++  +C+   +  AV+ F+ M   G  P   +Y  LISG C
Sbjct: 1134 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 1193

Query: 310  NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             +  L  A +  + M   G+ P  +T  TL + +CK      A  I   +   N    + 
Sbjct: 1194 KESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIR 1250

Query: 370  TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            T +TLI          + A  + ++L   + VD +T  A 
Sbjct: 1251 TVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF 1290



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/187 (19%), Positives = 78/187 (41%)

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++  + ++G  +    +  +M   G+ +     N +IL   +    + A  +  ++    
Sbjct: 767 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 826

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P++ TY  +I G C   N   A +    M+  G   +     ++++ FC+    +RA 
Sbjct: 827 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 886

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
               ++ +  ++P+ I  S + SGL   G  + A +L  +M   G  P  +     I+  
Sbjct: 887 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 946

Query: 554 PENGEKE 560
            + G  E
Sbjct: 947 CKKGWTE 953


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 172/352 (48%), Gaps = 1/352 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D     F++L        +   A      M   G  P I + N  +      E V  A  
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M +  + P+V   N+++  +CK  +++ A+ +FK + +   +P++ +YN+LI G C
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N G +S   K  + M  +   P+V+T+N LI   CK+G++ EA  +   M    V PN+V
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN +++GY    N  +   ++  M+++G++ DIL YN LI G CK     +A  L K++
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
              +L+P+ ++Y++LI G C         +L   M  SG  P+   + +L+  FC+ + F
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+A  +  +++E  + PD      +   L    K ++A    + + + G  P
Sbjct: 562 DKAISLFRQIVEG-IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSP 612



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 163/324 (50%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           Q+ + G L    + N  +       R         +M R  + P+ YT N+++ A CK G
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I  A  V   M   G  P + TYN L+ G+C++  +  A +  N M K G++P+V+ +N
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G+CK   + EA  +F E+   N+ P + +YN+LI+G    G       L +EM  +
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D++TYN LI  LCKEG+  +A  ++  + K  + PN  TY+A++ G C+R N   A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             ++  M++SG  P+   + +L++ +C+ E  D A  +  EM  K + PD    + L  G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L + G+     +L  +M   G  P
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSP 543



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VFD L         +  A   F Q++  G  P I +    ++          A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            ++   PN+ T N +++ FC  G+I +A++  +N+ + G++    TY TLI+G    G +
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+     MEK+ +QPN++ ++ LI G CK G + +A  + S++    +  + VTYN+L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G   VG  +    L  +M+R  +  D  T+N LI  LCKEG+  +A  ++  + K   
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+AL+ G C R+N   A +L+  M++ G  P+   + +L+  +C+ +  D A  
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +  E+  K + P     + L  GL + G+     KL  +M
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 188/380 (49%), Gaps = 3/380 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G    ++     +LF+ ++   R  +   L +++L   Y   K    A   F ++ 
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVK--RGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELC 362

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +   +P I S N  +  L +S R+        EM  +   P+V T N+++ A CK G I 
Sbjct: 363 NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRIL 422

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ V   M   G  P++ TYN ++ G+C +  +++A    N M K+G++P+++ +N LI
Sbjct: 423 EALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLI 482

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+CK   + EA  +F EM+  N+ P++ +YN+LI+G   +G       L +EM  +G  
Sbjct: 483 NGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQS 542

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TYN L+   CK     KA  L + + +  + P+  T  A++   C  +  + A   
Sbjct: 543 PDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDA 601

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            K ++  GC PN   + +L++  C++  F  A  +L +M +    PD+I    +   L  
Sbjct: 602 LKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQ 661

Query: 521 CGKDELAMKLFRKMEIRGLL 540
             + + A KL  +M  RGL+
Sbjct: 662 RNETDKAEKLREEMIARGLV 681



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 155/327 (47%), Gaps = 1/327 (0%)

Query: 216 FCQ-MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
           FCQ +   G+L    +    ++ L  + ++  AL   +EM ++ + PN+   + ++   C
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G +  A+ +   +   G +    TYN+LI G C+ G      +    M +  + P+  
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN LI   CK+G++ EA  + + M      P++VTYN L+ GY    N      L+  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ G++ D+L YN LI G CK     +A  L K+L   +LVP  ++Y++LI G C     
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
               +L   M  S   P+   + +L+   C+      A  VL+ M++K + P+ +  + +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G        +A  +F +M   GL P
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEP 473



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 151/300 (50%), Gaps = 4/300 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD A+  +  M R    P     + ++ A  ++G    A+ +F  ++S G  PS+ T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+ + ++   + A      + K+G QPN++TFNT+I GFC  G + +A      + A  
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              +  TY TLING  + G  +    L +EM ++ ++ +++ Y+ALI GLCK+G    A 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L   + +  ++ +A TY++LI G C     +   QL   M+R    P+ + F +L+   
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           C+      A  VL  M ++   PD +  + L  G  +C ++ +  A +LF +M  RGL P
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG--YCSRENVHEARELFNRMVKRGLEP 333



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 147/311 (47%), Gaps = 3/311 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  S++ G+ +S       KL D +  S +  D   + +++L        +   A     
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDV--VTYNILIDALCKEGRILEALGVLV 429

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P I + N  +        V++A   +  M ++ + P++   N++++ +CK  
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTE 489

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           +++ A+ +FK M     IP + +YN+LI G CN G +    +  + M  +G  P+VIT+N
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+  FCK     +A  +F ++    + P+  T + +++   +    +M     + +L +
Sbjct: 550 ILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   ++ TY  LI  LCK+G   +A  L+  ++ N   P+A T+  +I     R  +++A
Sbjct: 609 GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKA 668

Query: 458 FQLYKSMIRSG 468
            +L + MI  G
Sbjct: 669 EKLREEMIARG 679


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 176/351 (50%), Gaps = 5/351 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI-IESCNKFLSSLLDSERVDIALGFYKEM 254
           F+LLF   A  + +  A      +   G     + + N  ++ L    +  +       M
Sbjct: 77  FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLM 136

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  + P + TLN +++  C  G +  A+ + + ME++G+  +  TY  L++G C  G  
Sbjct: 137 TKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDT 196

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S A++    M K  + PNV+ +N ++ G CK+G + EA  +  EM   NV PNVVTYN L
Sbjct: 197 SGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCL 256

Query: 375 INGY-GQVGNSEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           I G  G+ G    G  L+ EM+   GI  D+ T++ L+ G CKEG   +A  +V  + + 
Sbjct: 257 IQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRI 316

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIR--SGCRPNKHIFEMLMSTFCQNEDFD 490
            + PN  TY++LI G C+R   E A +++  M+R   GC P+      L+  +C+ ++ D
Sbjct: 317 GVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVD 376

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A  +L EM+ K + PD    + L  G     K   A +LF  M+  G +P
Sbjct: 377 KAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVP 427



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 160/314 (50%), Gaps = 4/314 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC-KLGIIERAVEVFKNME 290
           N  L  L     V  ALG   EM    + PNV T N ++   C + G     V +F  M 
Sbjct: 219 NAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMV 278

Query: 291 S-MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           +  G +P V T++ L+ G C +GLL  A      M + G++PNV+T+N+LI G+C + ++
Sbjct: 279 AEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQM 338

Query: 350 HEANRIFSEM--KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            EA R+F  M  +     P+VVT+N+LI+G+ +V   +   SL  EM+  G+  D+ T+ 
Sbjct: 339 EEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWT 398

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           +LI G C+  K   A  L   + ++  VPN  T + ++ G         A  L+++M++S
Sbjct: 399 SLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKS 458

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   +  I+ +++   C+    + A ++L  +L K +  DS   + +  GL   G  + A
Sbjct: 459 GLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDA 518

Query: 528 MKLFRKMEIRGLLP 541
            +L RKM+  G  P
Sbjct: 519 EELLRKMKENGCPP 532



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 196/425 (46%), Gaps = 22/425 (5%)

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL 178
           D V++++FF  + T  P    ++  +++  ++ K++ + ++ S+++              
Sbjct: 54  DAVVAVDFFHRMLTLTPFP-CIQDFNLLFGLVAKSQHYATAISLIK-------------- 98

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
              IL+S     +     ++      H +K          M   G  P + + N  ++ L
Sbjct: 99  ---ILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGL 155

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                V+ AL   ++M       N  T   +++  CK+G    A+E  K M      P+V
Sbjct: 156 CIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNV 215

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK-GKLHEANRIFS 357
             YN ++ G C +GL+  A+   + M    ++PNV+T+N LI G C + G   E   +F+
Sbjct: 216 VVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFN 275

Query: 358 EMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           EM A   + P+V T++ L++G+ + G      S+   M+R G++ +++TYN+LI G C  
Sbjct: 276 EMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLR 335

Query: 417 GKTKKAAYLVKDL--DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            + ++A  +   +  +    +P+  T+++LI G C  K  ++A  L   M+  G  P+  
Sbjct: 336 SQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVF 395

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+  FC+ +    A E+   M E    P+    + +  GL  C  D  A+ LFR M
Sbjct: 396 TWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAM 455

Query: 535 EIRGL 539
              GL
Sbjct: 456 MKSGL 460



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 150/300 (50%), Gaps = 38/300 (12%)

Query: 247 ALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            +G + EM   + I P+V T ++++  FCK G++ RA  V   M  +G  P+V TYN+LI
Sbjct: 270 GVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLI 329

Query: 306 SGHCNKGLLSLAMKFKNLM--EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +G+C +  +  AM+   LM  E  G  P+V+T N+LI G+CK  ++ +A  + SEM    
Sbjct: 330 AGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKG 389

Query: 364 VSPNVVTYNTLINGY-------------------GQVGNSEMGA---------------- 388
           + P+V T+ +LI G+                   GQV N +  A                
Sbjct: 390 LDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAV 449

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           +L+  M+++G+ +DI+ YN ++ G+CK GK   A  L+  +    L  ++ TY+ +I G 
Sbjct: 450 TLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGL 509

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     + A +L + M  +GC PNK  + + +    +  D  R+ + L  M +K    D+
Sbjct: 510 CREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDA 569



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 116/254 (45%), Gaps = 2/254 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + ++ L   Y  R +   A   F  M     G LP + + N  +      + VD A+   
Sbjct: 323 VTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLL 382

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + P+V+T   ++  FC++     A E+F  M+  G +P++ T   ++ G    
Sbjct: 383 SEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKC 442

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
            L S A+     M K+G+  +++ +N ++ G CK GKL++A ++ S +    +  +  TY
Sbjct: 443 WLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTY 502

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I G  + G  +    L  +M  NG   +  +YN  + GL ++    ++   ++ +  
Sbjct: 503 NIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKD 562

Query: 432 NSLVPNASTYSALI 445
                +A+T   LI
Sbjct: 563 KGFPVDATTAELLI 576



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 102/250 (40%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G       +   ++F  ++     C  S +  + L   +   K+   A     +M 
Sbjct: 327 SLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMV 386

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    +    + ++   A   +  M+ +   PN+ T  +V+    K  +  
Sbjct: 387 GKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDS 446

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV +F+ M   G    +  YN ++ G C  G L+ A K  + +   G++ +  T+N +I
Sbjct: 447 EAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMI 506

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++G L +A  +  +MK     PN  +YN  + G  +  +        + M   G  
Sbjct: 507 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFP 566

Query: 401 VDILTYNALI 410
           VD  T   LI
Sbjct: 567 VDATTAELLI 576


>gi|48716454|dbj|BAD23061.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           [Oryza sativa Japonica Group]
          Length = 580

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 181/351 (51%), Gaps = 20/351 (5%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A   F  MR    +P   + +  L++L  S     A   + +M R  ++ N +  N ++
Sbjct: 128 DALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTHVYNAML 187

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           H   K G    A  +   M++ G      ++NT+I+ +C KG+   AM  +  ME  G++
Sbjct: 188 HVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERMENQGVK 247

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            +V+T+N+LI G CK+ ++ EA+++  EM    V+P+ VTY TL++GY + G+ E    L
Sbjct: 248 ADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDLEEAVKL 307

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             EM   G+   + TYNA++  LC++GK K+   L+ ++D+  +  +  T + LI   C 
Sbjct: 308 RGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCNTLINAYCK 367

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           R +   A ++ + M+ SG + ++  ++ L+  FC+ ++ D A E L EM+    +P+  +
Sbjct: 368 RGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGAGFSPNYSV 427

Query: 511 LSELYSGLHHCGK----------DELAMK-------LFRKMEIRGLLPKGF 544
           LS +  GL  C K          DEL  +       ++R + IR L  KGF
Sbjct: 428 LSWIVDGL--CNKNNAVAVLAIPDELMKRGFPPDKAVYRSL-IRRLCKKGF 475



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 150/319 (47%), Gaps = 4/319 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + M    +  +V T N ++H  CK   ++ A ++ + M   G  P   TY TL+ 
Sbjct: 234 AMCVRERMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVD 293

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G L  A+K +  ME  G+ P V T+N ++   C+ GK+ E N + +EM    V  
Sbjct: 294 GYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQA 353

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y + G+      +   M+ +G+++D  TY AL+ G CK  +  +A   +
Sbjct: 354 DHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEAL 413

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN S  S ++ G C + N+     +   +++ G  P+K ++  L+   C+ 
Sbjct: 414 FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKK 473

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
              D A  V  EM  K +  D ++ + L       GK   A+ +  +M  + L    +  
Sbjct: 474 GFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQL----YIT 529

Query: 547 LRTINCAPENGEKESGGLS 565
            +  NC   +   E G L+
Sbjct: 530 PQIYNCMCTSYADEKGSLN 548



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/301 (22%), Positives = 125/301 (41%), Gaps = 35/301 (11%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G    + + N  +  L    RV  A    +EM    ++P+  T   ++  +C+ G
Sbjct: 240 RMENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAG 299

Query: 278 IIERAVEVFKNMESMGFIPSVTTY-----------------------------------N 302
            +E AV++   ME+MG +P V TY                                   N
Sbjct: 300 DLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQADHVTCN 359

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLI+ +C +G ++ A+K K  M ++G+Q +  T+  L+ GFCK  +L EA     EM   
Sbjct: 360 TLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEALFEMMGA 419

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SPN    + +++G     N+    ++ +E+++ G   D   Y +LI  LCK+G    A
Sbjct: 420 GFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKKGFIDLA 479

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  ++    L  +   Y+ L            A  +   M +        I+  + ++
Sbjct: 480 GNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIYNCMCTS 539

Query: 483 F 483
           +
Sbjct: 540 Y 540



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 117/313 (37%), Gaps = 18/313 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + ++H L K R+ K +  +LR         +     D + Y+             L  
Sbjct: 252 TWNSLIHGLCKERRVKEASQLLR------EMAMAGVAPDHVTYT------------TLVD 293

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y        A     +M   G LP + + N  L  L +  ++        EM   ++  
Sbjct: 294 GYCRAGDLEEAVKLRGEMEAMGMLPGVATYNAILRKLCEDGKMKEVNVLLNEMDERKVQA 353

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T N +++A+CK G +  A++V + M   G      TY  L+ G C    L  A +  
Sbjct: 354 DHVTCNTLINAYCKRGDMTSALKVKRRMMESGLQLDQFTYKALVHGFCKAKELDEAKEAL 413

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   G  PN    + ++ G C K        I  E+      P+   Y +LI    + 
Sbjct: 414 FEMMGAGFSPNYSVLSWIVDGLCNKNNAVAVLAIPDELMKRGFPPDKAVYRSLIRRLCKK 473

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  ++  +++ EM   G++ D L Y  L       GK   A  ++ ++ K  L      Y
Sbjct: 474 GFIDLAGNVFNEMQGKGLEADCLVYATLACAYLTAGKPVAALDILNEMAKKQLYITPQIY 533

Query: 442 SALITGQCVRKNS 454
           + + T     K S
Sbjct: 534 NCMCTSYADEKGS 546



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 90/197 (45%)

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           +  + H+A R+F  M+A  V P+    + L+    +   +     ++++M R G+ ++  
Sbjct: 122 QSARPHDALRVFDHMRAREVVPDAHASSALLTALAKSRMTATARKVFDQMTRAGVAMNTH 181

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YNA++    K G    A  L+  +D   +  +  +++ +I   C +     A  + + M
Sbjct: 182 VYNAMLHVCLKAGDAALAESLMTRMDAAGVPLDRFSFNTVIALYCRKGMQYEAMCVRERM 241

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G + +   +  L+   C+      A+++L EM    +APD +  + L  G    G  
Sbjct: 242 ENQGVKADVVTWNSLIHGLCKERRVKEASQLLREMAMAGVAPDHVTYTTLVDGYCRAGDL 301

Query: 525 ELAMKLFRKMEIRGLLP 541
           E A+KL  +ME  G+LP
Sbjct: 302 EEAVKLRGEMEAMGMLP 318


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 178/410 (43%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL------LDSE 242
           C  SP +F+ L   Y        A     +M   G +P     N  + S+      L+ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +D+A   Y EM    +  N   ++      C  G  E+A  V + M   GFIP  +TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +++  CN   + LA      M++ G+  +V T+  ++  FCK G + +A + F+EM+  
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PNVVTY  LI+ Y +         L+E ML  G   +I+TY+ALI G CK G+ +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607

Query: 423 AYL----------------VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +                 K  D NS  PN  TY AL+ G C     E A +L  +M  
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
            GC PN+ +++ L+   C+    D A E                                
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727

Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              VL +MLE   AP+ +I +E+  GL   GK + A KL + ME +G  P
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++  ++        A   F +MR+ G  P + +    + + L +++V  A   ++ M 
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP----------------SVT 299
                PN+ T + ++   CK G +E+A ++F+ M     +P                +V 
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  L+ G C    +  A K  + M   G +PN I ++ LI G CK GKL EA  + +EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                   + TY++LI+ Y +V   ++ + +  +ML N    +++ Y  +I GLCK GKT
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L++ +++    PN  TY+A+I G  +    E   +L + M   G  PN   + +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           +   C+N   D A  +L EM
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 190/459 (41%), Gaps = 62/459 (13%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           + FF W         T   ++ ++ ++ ++   K  E  L+ I D D      ++F   L
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEFL 203

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        ++L + +     F  A +   +++D+ F P   + N  + + L ++R
Sbjct: 204 -------------NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADR 250

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   ++EM    +  + +TL    ++ CK+G    A+ +   +E+  F+P    Y  
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTK 307

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LISG C   L   AM F N M      PNV+T++TL+ G   K +L    R+ + M    
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 364 VSPNVVTYNTLINGYGQVGNS--------------------------------------- 384
             P+   +N+L++ Y   G+                                        
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 385 --EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             ++    Y EML  G+ ++ +  ++    LC  GK +KA  +++++     +P+ STYS
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            ++   C     E AF L++ M R G   + + + +++ +FC+    ++A +   EM E 
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              P+ +  + L        K   A +LF  M   G LP
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 6/334 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G   S   +   KL D++  S   C+ + +V+D L        K   A +   +M 
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++GF   + + +  +      +R D+A     +M  N  +PNV     ++   CK+G  +
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + ME  G  P+V TY  +I G    G +   ++    M   G+ PN +T+  LI
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G L  A+ +  EMK T+   +   Y  +I G+ +     +G  L +E+ ++   
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTA 879

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAF 458
             +  Y  LI  L K  + + A  L++++   S  LV  +STY++LI   C+    E AF
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           QL+  M + G  P    F  L+    +N     A
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 4/346 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           +F+     K   +    F Q  D    P + +    L     S RV+ A      M    
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN    + ++   CK+G ++ A EV   M   GF  ++ TY++LI  +       LA 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M +N   PNV+ +  +I G CK GK  EA ++   M+     PNVVTY  +I+G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G +G  E    L E M   G+  + +TY  LI   CK G    A  L++++ +     + 
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           + Y  +I G    K    +  L   + +    P   ++ +L+    + +  + A  +L E
Sbjct: 850 AGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 499 M--LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +      +   S   + L   L    K E A +LF +M  +G++P+
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 210/466 (45%), Gaps = 53/466 (11%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           E H+++L    +  K  S  S++     S+  D     F  +   +     S  +++LL 
Sbjct: 60  ELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           ++    ++    +  +  M   G  P   + N  + +L DS  VD A   + EM      
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN +T  +++  +CK G+ ++ +E+   MES G +P+   YNT++S  C +G    + K 
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKM 239

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----SPNVVTYNTLIN 376
              M + G+ P+++TFN+ I   CK+GK+ +A+RIFS+M+         PN +TYN ++ 
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299

Query: 377 GYGQVGNSEMGASLYE-----------------------------------EMLRNGIKV 401
           G+ +VG  E   +L+E                                   +M   GI  
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            I +YN L+ GLCK G    A  +V  + +N + P+A TY  L+ G C     + A  L 
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+R+ C PN +   +L+ +  +      A E+L +M EK    D++  + +  GL  C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL--C 477

Query: 522 GKDEL--AMKLFRKMEIRGLLPKG----------FDKLRTINCAPE 555
           G  EL  A+++ + M + G    G           D L   NC P+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 190/434 (43%), Gaps = 55/434 (12%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           +L++++I L  L ++ KF  +E++L+ + D        K     +YSY          ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTD--------KGIGPSIYSY----------NI 366

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L           +A      M+  G  P   +    L       +VD A    +EM RN 
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN YT N+++H+  K+G I  A E+ + M   G+     T N ++ G C  G L  A+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486

Query: 319 KFKNLME-----------------------KNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           +    M                        +N   P++IT++TL+ G CK G+  EA  +
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F+EM    + P+ V YN  I+ + + G       + ++M + G    + TYN+LILGL  
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           + +  +   L+ ++ +  + PN  TY+  I   C  +  E A  L   M++    PN   
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHCGKDELAMKLFR 532
           F+ L+  FC+  DFD A EV    +  C   +   S++ +EL +          A +L +
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA----------AGQLLK 716

Query: 533 KME-IRGLLPKGFD 545
             E +  +L +GF+
Sbjct: 717 ATELLEAVLDRGFE 730



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 191/443 (43%), Gaps = 72/443 (16%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA----------------- 204
           ++R + DS   D   +LFD +    + C  +   F +L + Y                  
Sbjct: 153 LIRALCDSSCVDAARELFDEM--PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210

Query: 205 -----HRKKFRNATDTFC-------------QMRDYGFLPIIESCNKFLSSL------LD 240
                ++  +     +FC             +MR+ G +P I + N  +S+L      LD
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270

Query: 241 SERV--DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           + R+  D+ L  Y  + R    PN  T N+++  FCK+G++E A  +F+++     + S+
Sbjct: 271 ASRIFSDMELDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            +YN  + G    G    A      M   GI P++ ++N L+ G CK G L +A  I   
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           MK   V P+ VTY  L++GY  VG  +   SL +EM+RN    +  T N L+  L K G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK---------------- 462
             +A  L++ +++     +  T + ++ G C     ++A ++ K                
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 463 -------SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
                  S+I + C P+   +  L++  C+   F  A  +  EM+ + + PDS+  +   
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566

Query: 516 SGLHHCGKDELAMKLFRKMEIRG 538
                 GK   A ++ + ME +G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKG 589


>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
          Length = 800

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 179/400 (44%), Gaps = 38/400 (9%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLS 236
           D  L S  +  ++P       L   YA       ATD   ++R+ YG LP +  CN+ L 
Sbjct: 328 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLK 387

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L++  R D A   Y EM       + Y+  +++   C  G +E  +++ +     G IP
Sbjct: 388 LLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIP 447

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V  YN LI G+C +G +   +     ME  G  P ++T+ +LI    KKG L +   +F
Sbjct: 448 HVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLF 507

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM+   +SPNV  YN++I+   +  ++     + ++M  +G   DI+T+N LI GLC E
Sbjct: 508 LEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 567

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------- 468
           G  +KA + +++  +  L PN  +Y+ LI G C+R     A  L   M+  G        
Sbjct: 568 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTF 627

Query: 469 ---------------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
                                        P+ +I+ +L+S  C+      A  +L EMLE
Sbjct: 628 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 687

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           K + PD  + + L  G         A K+F  ME +G+ P
Sbjct: 688 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 727



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 160/337 (47%), Gaps = 9/337 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +++L   Y  R           +M   GFLP + +    ++ L     ++   
Sbjct: 445 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 504

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EMR+  +SPNV   N V+ A CK     +A+ + K M + G  P + T+NTLI+G 
Sbjct: 505 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 564

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C++G +  A  F     +  + PN +++  LI GFC +G+L  A+ +  EM     +P+V
Sbjct: 565 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 624

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+  LI+G    G       + E+M    +  D+  YN LI GLCK+     A  ++++
Sbjct: 625 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 684

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + + ++ P+   Y+ LI G    +N   A ++++ M   G RP+      ++  +CQ   
Sbjct: 685 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQ--- 741

Query: 489 FDRAAEVLLEM------LEKCMAPDSIILSELYSGLH 519
           F   +E +L M      LE   A   I+ S   SG++
Sbjct: 742 FGMMSEAILCMSNMRKQLEVERAGTFIVPSNWRSGIN 778



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 79/174 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + L +  L   +  R +   A+D   +M   G  P + +    +  L+ + +V  
Sbjct: 583 RELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSE 642

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   ++M   ++ P+V   N+++   CK  ++  A  + + M      P    Y TLI 
Sbjct: 643 ALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLID 702

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           G      L  A K    ME  G++P++++ N +I G+C+ G + EA    S M+
Sbjct: 703 GFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 756


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 178/410 (43%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL------LDSE 242
           C  SP +F+ L   Y        A     +M   G +P     N  + S+      L+ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +D+A   Y EM    +  N   ++      C  G  E+A  V + M   GFIP  +TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +++  CN   + LA      M++ G+  +V T+  ++  FCK G + +A + F+EM+  
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PNVVTY  LI+ Y +         L+E ML  G   +I+TY+ALI G CK G+ +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607

Query: 423 AYL----------------VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +                 K  D NS  PN  TY AL+ G C     E A +L  +M  
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
            GC PN+ +++ L+   C+    D A E                                
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727

Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              VL +MLE   AP+ +I +E+  GL   GK + A KL + ME +G  P
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++  ++        A   F +MR+ G  P + +    + + L +++V  A   ++ M 
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP----------------SVT 299
                PN+ T + ++   CK G +E+A ++F+ M     +P                +V 
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  L+ G C    +  A K  + M   G +PN I ++ LI G CK GKL EA  + +EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                   + TY++LI+ Y +V   ++ + +  +ML N    +++ Y  +I GLCK GKT
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L++ +++    PN  TY+A+I G  +    E   +L + M   G  PN   + +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           +   C+N   D A  +L EM
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 190/459 (41%), Gaps = 62/459 (13%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           + FF W         T   ++ ++ ++ ++   K  E  L+ I D D      ++F   L
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEFL 203

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        ++L + +     F  A +   +++D+ F P   + N  + + L ++R
Sbjct: 204 -------------NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADR 250

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   ++EM    +  + +TL    ++ CK+G    A+ +   +E+  F+P    Y  
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTK 307

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LISG C   L   AM F N M      PNV+T++TL+ G   K +L    R+ + M    
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 364 VSPNVVTYNTLINGYGQVGNS--------------------------------------- 384
             P+   +N+L++ Y   G+                                        
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427

Query: 385 --EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             ++    Y EML  G+ ++ +  ++    LC  GK +KA  +++++     +P+ STYS
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            ++   C     E AF L++ M R G   + + + +++ +FC+    ++A +   EM E 
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              P+ +  + L        K   A +LF  M   G LP
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 7/348 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G   S   +   KL D++  S   C+ + +V+D L        K   A +   +M 
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++GF   + + +  +      +R D+A     +M  N  +PNV     ++   CK+G  +
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + ME  G  P+V TY  +I G    G +   ++    M   G+ PN +T+  LI
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G L  A+ +  EMK T+   +   Y  +I G+ +     +G  L +E+ ++   
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTA 879

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAF 458
             +  Y  LI  L K  + + A  L++++   S  LV  +STY++LI   C+    E AF
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           QL+  M + G  P    F  L+    +N     A  +LL+ +   + P
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL-LLLDFISHMVCP 986



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 4/346 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           +F+     K   +    F Q  D    P + +    L     S RV+ A      M    
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN    + ++   CK+G ++ A EV   M   GF  ++ TY++LI  +       LA 
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M +N   PNV+ +  +I G CK GK  EA ++   M+     PNVVTY  +I+G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G +G  E    L E M   G+  + +TY  LI   CK G    A  L++++ +     + 
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           + Y  +I G    K    +  L   + +    P   ++ +L+    + +  + A  +L E
Sbjct: 850 AGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907

Query: 499 M--LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +      +   S   + L   L    K E A +LF +M  +G++P+
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 181/383 (47%), Gaps = 7/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   +  D    L +++  + R C  + + ++ +   +   ++   A     QM 
Sbjct: 114 ALVDGLCKCERLDEAVALVETM--AERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMV 171

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I +    +     S  V   L    E+ R   +P++ T + V+   CK G + 
Sbjct: 172 AEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLR 231

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV++F   E M   P+  TYN+LI G+C  G +  A++    M  +   P+V+T+ TL+
Sbjct: 232 DAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLM 288

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK G+L +A  +F +M A  +SP+VVT+ +L++G    G  E    L EE+ R G  
Sbjct: 289 SAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             I TYN ++ G CK  + +KA  LV D      VPN  TY+ L+ G C    +++A Q 
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQY 408

Query: 461 YKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              +   G  C  +  ++ +++   C++   D A +   EM+++   P +   + +   L
Sbjct: 409 LDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFAL 468

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
               + + A +L  +M   G  P
Sbjct: 469 CKAHQPQQAHELLEEMIKYGHTP 491



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 177/359 (49%), Gaps = 8/359 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L+ +++        + R+A   + QM D    P   +  K +  L  + R+  A+   +E
Sbjct: 6   LLHNVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQE 64

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   R  P+  TL +V+ + C    ++ A E+ + M   G   +  TY+ L+ G C    
Sbjct: 65  MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M + G  P V+T+N++I GFC+  ++ EA+    +M A    P+++TY  
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ +  +   G  L  E+ R G   DI+TY+ +I GLCK G+ + A  + +++   S
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---S 241

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P A TY++LI G C   + + A +L   M+   C P+   +  LMS FC+    D A 
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           E+  +M+   ++PD +  + L  GL   G+ E A++L  ++  RG  P     + T NC
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPP----TIYTYNC 356



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 174/390 (44%), Gaps = 41/390 (10%)

Query: 187 RMCDSSP---LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           +M D+ P   L +  L    +  ++ R+A     +M     +P   +    + SL   +R
Sbjct: 30  QMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDR 89

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD A    +EM    ++ N  T + ++   CK   ++ AV + + M   G  P+V TYN+
Sbjct: 90  VDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNS 149

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF-------------------- 343
           +I+G C    +  A  F   M   G  P++IT+  LI GF                    
Sbjct: 150 IITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRG 209

Query: 344 ---------------CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
                          CK G+L +A  IF EM   + +P  +TYN+LI GY + G+ +   
Sbjct: 210 FTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAI 266

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L  +M+ +    D++TY  L+   CK G+   A  L + +  N L P+  T+++L+ G 
Sbjct: 267 RLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGL 326

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     E A +L + + R GC P  + +  ++  +C+     +A E++ +   +   P++
Sbjct: 327 CGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNT 386

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  + L +G    G+ + A++   ++   G
Sbjct: 387 VTYNILVAGCCRAGRTDQALQYLDQLNSEG 416



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 148/294 (50%), Gaps = 5/294 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R+A D F +M      P   + N  +     +  +D A+    +M  ++ +P+V T  
Sbjct: 229 RLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT 285

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M AFCK+G ++ A E+F+ M +    P V T+ +L+ G C +G +  A++    + + 
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G  P + T+N ++ G+CK  ++ +A  + ++ ++    PN VTYN L+ G  + G ++  
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405

Query: 388 ASLYEEMLRNG--IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               +++   G      +  Y  ++  LC++G+T  A    +++ +   VP A+T++ ++
Sbjct: 406 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 465

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
              C     ++A +L + MI+ G  P     + ++S +C+     +A E+  E+
Sbjct: 466 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P    +N +I G C  G L  A+     M  +   P+ +T+  L+ G  K  +L +A ++
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EM +    P+  T   ++         +    L EEML  G+  + +TY+AL+ GLCK
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             +  +A  LV+ + +    P   TY+++ITG C  +  + A    + M+  GC P+   
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +  L+  FC++ D  R  E+L E+  +   PD +  S +  GL   G+   A+ +F +M
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 136/298 (45%), Gaps = 7/298 (2%)

Query: 170 DSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           D      +L D++ ++    C  + + ++ L   Y        A     +M D    P +
Sbjct: 222 DGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            +    +S+     R+D A   +++M  N++SP+V T   ++   C  G +E A+E+ + 
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +   G  P++ TYN ++ G+C    +  A +        G  PN +T+N L+ G C+ G+
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGR 401

Query: 349 LHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
             +A +   ++ +       +V  Y  +++   + G ++     YEEM++ G      T+
Sbjct: 402 TDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC----VRKNSERAFQL 460
             ++  LCK  + ++A  L++++ K    P   T  A+++  C    ++K  E A +L
Sbjct: 462 ATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      +   +L + I  + R C  +   ++ +   Y    + R A +     R
Sbjct: 321 SLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR--ISPNVYTLNMVMHAFCKLGI 278
             GF+P   + N  ++    + R D AL +  ++         +V    +++ A C+ G 
Sbjct: 379 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 438

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            + AV+ ++ M   G++P+  T+ T++   C       A +    M K G  P   T + 
Sbjct: 439 TDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDA 498

Query: 339 LIFGFCKKGKLHEANRIFSEMK 360
           ++  +C+ G + +A+ + SE++
Sbjct: 499 VVSAYCRAGMIQKADELASELR 520


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 9/374 (2%)

Query: 177 KLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQM---RDYGFL--PIIE 229
           K  +++L   +  D  P  + F +L       ++   A + F +M      GFL  P + 
Sbjct: 322 KRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVI 381

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           + N  +  L    R +  LG  + MR   R  PN  T N ++  +CK  +IE A E+F  
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   G  P+V T NTL+ G C  G ++ A++F N M+  G++ N +T+  LI  FC    
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A  +F EM     SP+ + Y TLI+G  Q G  +  + +  +M   G   DI+++N 
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G C++ K  +A  ++K+++   + P+  TY+ LI+      +   A +L K M++ G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELA 527
             P    +  L+  +C N + D A ++  +M     + P+++I + L + L    + +LA
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681

Query: 528 MKLFRKMEIRGLLP 541
           + L   M+++G+ P
Sbjct: 682 LSLMDDMKVKGVKP 695



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 162/339 (47%), Gaps = 4/339 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   Y        A + F QM   G  P + + N  +  +    R++ A+
Sbjct: 412 CMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAV 471

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+ EM+   +  N  T   ++ AFC +  IE+A+E+F  M   G  P    Y TLISG 
Sbjct: 472 EFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G L  A    + M++ G  P++++FN LI GFC+K KL EA  +  EM+   + P+ 
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+ + + G+      L ++M++ G+   ++TY ALI   C  G   +A  + +D
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651

Query: 429 LDKNSLVP-NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +   S VP N   Y+ LI   C +   + A  L   M   G +PN + F  +     +  
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711

Query: 488 DFDRAAEVLLEMLEKCMAPDSI---ILSELYSGLHHCGK 523
              +A E++  M E    PD I   IL+E  S +    K
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAK 750



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 216/489 (44%), Gaps = 68/489 (13%)

Query: 123 SLEFFTWVQTHKPS------SLTLE-----------THSIVLHILTKNRKFKSSESILRG 165
           +L+FF WVQ + P       S TLE           +H+ +L +   ++  K   S+   
Sbjct: 103 ALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAA 162

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPL--VFDLLFKTYAHRKKFRNATDTFCQMRD-- 221
            L    F     + +S L    +C S  L  + ++L      + +  +A     +M    
Sbjct: 163 TLLIRCFGRAQMVDESFLVYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPK 222

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIA------LGFYKEMRRNRISPNVYTLNMVMHAFCK 275
             F P   + +   S+L   ++V  A      +G   +   + + PN   L  ++   C+
Sbjct: 223 AEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282

Query: 276 LGIIERAVEV----------------------------FK-------NMESMGFIPSVTT 300
            G  +RA +V                            FK        M+ M   P+V T
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342

Query: 301 YNTLISGHCNKGLLSLAMKFKNLM---EKNG--IQPNVITFNTLIFGFCKKGKLHEANRI 355
           +  LI+  C    +  A++    M   E NG  ++P+VIT+NTLI G CK G+  E   +
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 356 FSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
              M++     PN VTYN LI+GY +    E    L+++M ++G+  +++T N L+ G+C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G+   A     ++    L  NA TY+ALI   C   N E+A +L+  M+ +GC P+  
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAI 522

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ++  L+S   Q    DRA+ VL +M E   +PD +  + L +G     K + A ++ ++M
Sbjct: 523 VYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM 582

Query: 535 EIRGLLPKG 543
           E  G+ P G
Sbjct: 583 ENAGIKPDG 591



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 120/268 (44%), Gaps = 3/268 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++R   + ++ +   +LFD +L +   C    +V+  L    +   K   A+    +M+
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAG--CSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + GF P I S N  ++      ++D A    KEM    I P+  T N ++  F K G   
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
            A  + K M   G +P+V TY  LI  +C  G L  AMK F+++   + + PN + +N L
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   C+K ++  A  +  +MK   V PN  T+N +  G  +         L + M  +  
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHAC 728

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVK 427
             D +T   L   L   G+T K    V+
Sbjct: 729 NPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 16/229 (6%)

Query: 337 NTLIFGFCKKGKLHEANRIFSEM--KATNVSPNVVTYNTLING------YGQVGNSEMGA 388
           N LI    +KG++ +A  +  EM        PN  T + + +        G+  + E   
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L  +   + +  + +    LI  LC+ G+T +A  ++  L K   V  A++ +AL+T  
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-----C 503
              +  +R   L   M     +PN   F +L++  C+    D A EV  +M         
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           + PD I  + L  GL   G+ E  + L  +M  +   P+      T NC
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQ---PRCMPNTVTYNC 421


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 158/306 (51%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + SL   + V  A   Y EM    I PNVYT ++++ A CK    ++A+ +   M   G
Sbjct: 153 IIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKG 212

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V TY  ++ G+C    ++ A+   N+M + G++PNV  +N +I G CKK ++ EA 
Sbjct: 213 VKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAM 272

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F EM    ++P+VVTYN LI+G  ++G       L +EM   G  VDI+TYN+L+  L
Sbjct: 273 NLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHAL 332

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK     +A  LVK++    + PN  TY+ LI G C     E A+ +++ ++  G     
Sbjct: 333 CKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITV 392

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             + ++++  C+   FD A  +L  M +    PD++    +   L   G+     KL   
Sbjct: 393 WTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCA 452

Query: 534 MEIRGL 539
           M +RGL
Sbjct: 453 MIVRGL 458



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 153/309 (49%), Gaps = 6/309 (1%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           +S+ +G   +D++ L S++    ++       +   F +L       +K + A +    M
Sbjct: 155 DSLCKGKFVTDAYRLYSEMIAKGIFP------NVYTFSILVDALCKDRKGKQAMNLLAMM 208

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P + +    +       +V+ AL  +  M +  + PNV+  N++++  CK   +
Sbjct: 209 MKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRV 268

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+ +FK M      P V TYN LI G C  G +S +++  + M   G   ++IT+N+L
Sbjct: 269 DEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSL 328

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   CK   L +A  +  E+K   + PNV TY TLI+G  + G  E    +++E+L  G 
Sbjct: 329 LHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGY 388

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
            + + TYN +I GLCK+G   +A  L+  ++ N+ +P+A +Y  +I     +  + +  +
Sbjct: 389 HITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNK 448

Query: 460 LYKSMIRSG 468
           L  +MI  G
Sbjct: 449 LLCAMIVRG 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 159/313 (50%), Gaps = 3/313 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I   N  L+SL+       A+  ++++  N I P++ TL ++M+ +C  G I     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              +  MG+ P+  T+ TLI G C  G    A+ F + +  +G + + +++  L+ G CK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+   A ++   ++ T V+ +VV Y+T+I+   +         LY EM+  GI  ++ T
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           ++ L+  LCK+ K K+A  L+  + K  + PN  TY A++ G C+     +A  ++  M+
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G  PN   + ++++  C+ +  D A  +  EM  K + PD +  + L  GL   GK  
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 526 LAMKLFRKMEIRG 538
            +++L  +M   G
Sbjct: 305 TSLELVDEMRSIG 317



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 120/293 (40%), Gaps = 53/293 (18%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T SI++  L K+RK K + ++L  ++                   +    + + +  +  
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMK------------------KGVKPNVVTYGAIMD 225

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    +   A + F  M   G  P +   N  ++ L   +RVD A+  +KEM   +I+P
Sbjct: 226 GYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINP 285

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V T N+++   CKLG I  ++E+   M S+G    + TYN+L+   C    L  A+   
Sbjct: 286 DVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLV 345

Query: 322 NLMEKNGIQPNVITFNTLIFG-----------------------------------FCKK 346
             ++  GIQPNV T+ TLI G                                    CKK
Sbjct: 346 KEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK 405

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           G   EA  + S M+     P+ V+Y T+I    + G +     L   M+  G+
Sbjct: 406 GLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 97/204 (47%), Gaps = 2/204 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+      D    LF  +   ++  +   + +++L        K   + +   +MR 
Sbjct: 258 IINGLCKKKRVDEAMNLFKEM--HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRS 315

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G    I + N  L +L  +  +D A+   KE++   I PNV T   ++   CK G +E 
Sbjct: 316 IGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLED 375

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F+ + + G+  +V TYN +I+G C KGL   A+   + ME N   P+ +++ T+I+
Sbjct: 376 AYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIY 435

Query: 342 GFCKKGKLHEANRIFSEMKATNVS 365
              +KG+  + N++   M    +S
Sbjct: 436 ALSEKGETVKTNKLLCAMIVRGLS 459


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 3/326 (0%)

Query: 219 MRD---YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           +RD   +G  P + S N  L  L  ++R        +EM R    PN+ T N ++   C+
Sbjct: 252 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 311

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+ ER  EV   M   G  P +  Y T+I G C +G L +A +  N M   G++PNV+ 
Sbjct: 312 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 371

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTL+ G C   +  E   + +EM   +   + VT+N L++ + Q G  +    L E+ML
Sbjct: 372 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 431

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G   D++TY  +I G CKEG   +A  L+K +      PN  +Y+ ++ G C  +   
Sbjct: 432 EHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 491

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   MI+ GC  N   F  L++  C+    ++A E+L +ML    +PD I  S + 
Sbjct: 492 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 551

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   GK + A++L   M  +G+ P
Sbjct: 552 DGLGKAGKTDEALELLNVMVNKGMSP 577



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 35/320 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  YG  P +   N  L  L  +ER +       EM       +  T N+++  FC+ G
Sbjct: 359 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 418

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV---- 333
           +++R +E+ + M   G +P V TY T+I+G C +GL+  A+     M   G +PN     
Sbjct: 419 LVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 478

Query: 334 -------------------------------ITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                          ITFNTLI   CKKG + +A  +  +M   
Sbjct: 479 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP++++Y+T+I+G G+ G ++    L   M+  G+  + + Y+++   L +EG+  K 
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  ++   ++  +A  Y+A+I+  C R  +ERA +    M+ SGC PN+  + +L+  
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658

Query: 483 FCQNEDFDRAAEVLLEMLEK 502
                    A E+L E+  K
Sbjct: 659 LASEGFVKEAQEMLTELCSK 678



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 147/320 (45%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P++ +       L    R+  AL    EM R   +P     ++++ A C+ G    
Sbjct: 160 YTYFPVVRA-------LCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 212

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV V +++ + G    V   N +++  C++G +  A+     +   G +P+V+++N ++ 
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 272

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +      +  EM      PN+VT+NTLI+   + G  E    +  +M+ +G   
Sbjct: 273 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 332

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ L+ G C  +  E   +L 
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 392

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M    C  +   F +L+  FCQN   DR  E+L +MLE    PD I  + + +G    
Sbjct: 393 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 452

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 453 GLIDEAVMLLKSMTACGCKP 472



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 3/241 (1%)

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN +++G+C  G L  A   + L     + PN  T+  ++   C +G++ +A  +  EM 
Sbjct: 130 YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
               +P    Y+ ++    + G       + E++   G  +D+   N ++  +C +G   
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A +L++DL      P+  +Y+A++ G C+ K      +L + M+R  C PN   F  L+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           S  C+N  F+R  EVL +M+E    PD  + + +  G+   G  E+A ++  +M   GL 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 541 P 541
           P
Sbjct: 367 P 367



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 126/293 (43%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+ A C  G I  A+ V   M   G  P    Y+ ++   C  G    A+
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 214

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    +   G   +V   N ++   C +G + EA  +  ++ +    P+VV+YN ++ G 
Sbjct: 215 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 274

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L EEM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 275 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 334

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  L+   C  E ++   E+L E
Sbjct: 335 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 394

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M   G +P        IN
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 447



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 128/280 (45%), Gaps = 12/280 (4%)

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  +C+ G +E A  +     ++   P+  TY  ++   C +G ++ A+   + M +
Sbjct: 131 NAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P    ++ ++   C+ G    A R+  ++ A   + +V   N ++N     G+ + 
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 247

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  ++   G + D+++YNA++ GLC   +      L++++ + +  PN  T++ LI+
Sbjct: 248 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 307

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C     ER  ++   M+  GC P+  ++  ++   C+    + A E+L  M    + P
Sbjct: 308 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 367

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           + +  + L  GL  C  +       R  E   LL + FDK
Sbjct: 368 NVVCYNTLLKGL--CSAE-------RWEETEELLAEMFDK 398


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 190/381 (49%), Gaps = 3/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +++G   S++ +   +++  ++ S    D+  + + +L    A   K   +     +M 
Sbjct: 50  GVMQGFARSNNMEKAREVYQHMVESGYKPDN--VSYHILIHGLAKIGKLDESLKILSEMV 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P +++ +  + +L  + RVD A   + EM R    P+      ++   C+ G ++
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVK 167

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E FK M   G  P+V  YN L+ G C+ G L  A      M+ +   P+V+T+NTL+
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK  ++ E  ++F  M+A    PNV+T++TLI+G  + G  E    ++  ML  G K
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +  TY  LI GLC+  K  +A  L + + +  + P+A  Y++LI G C R + + A +L
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347

Query: 461 YKSMIR-SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           Y+ M   +G +P    F  L+  FC+     RA E++ EM  K +A DS     L +GL 
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407

Query: 520 HCGKDELAMKLFRKMEIRGLL 540
              K + A++++++M  +  L
Sbjct: 408 RATKLDEALEVYKQMREKKFL 428



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 167/339 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  + K+     K   +     +M   G  P + + N  +     S  ++ A   Y+ M 
Sbjct: 13  YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +   P+  + ++++H   K+G ++ ++++   M   G  PS+  Y++L+        + 
Sbjct: 73  ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M + G  P+ + F  LI G C+ GK+ +A+  F +M      PNV  YN L+
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G    G  E   +L+ EM  +    D++TYN L+  +CK  + ++   L + +     V
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T+S LI G C     E+A +++ SM+ +GC+PNK+ +  L+S  C+ E   +A E+
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAREL 312

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             +M + C+ PD++  + L +G    G  + A KL+R+M
Sbjct: 313 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 199/413 (48%), Gaps = 27/413 (6%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQK-DYVLSLEFFTWVQTHKPSSLTLETHS 144
           Y H++ S +K    +S H+    + H L K+ K D  L +     ++   PS   ++ +S
Sbjct: 68  YQHMVESGYKP-DNVSYHI----LIHGLAKIGKLDESLKILSEMVMRGQTPS---MQAYS 119

Query: 145 IVLHILTKNRKFKSSESI----LRGILDSDS---FDL------PSKLFDSILYSYRM--- 188
            ++  L K R+   + S+    +RG    D    ++L        K+ D+     +M   
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 189 -CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
            C  +  V+++L        +   A   F +M+ +   P + + N  L ++  + RV+  
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              ++ MR     PNV T + ++H  C+ G +E+A+EVF +M   G  P+  TY TLISG
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSP 366
            C    +  A +    M +  I P+ + +N+LI G+CK+G + EA +++ EM     + P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +VT+NTLI+G+ ++G       L  EM   G+  D  TY  LI GL +  K  +A  + 
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVY 419

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           K + +   + +  +  + + G C   N ++A+ ++++  +SG  PN   F +L
Sbjct: 420 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 472



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 172/352 (48%), Gaps = 1/352 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+     F+ + + +A       A + +  M + G+ P   S +  +  L    ++D +L
Sbjct: 41  CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 100

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM     +P++   + ++ A  K   ++ A  +F  M   G  P    +  LI G 
Sbjct: 101 KILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGL 160

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A +    M K+G QPNV  +N L+ G C  G+L +AN +F+EMK+ + SP+V
Sbjct: 161 CQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDV 220

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTL++   +    E G  L+E M   G   +++T++ LI GLC+ G+ +KA  +   
Sbjct: 221 VTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 280

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +    PN  TY+ LI+G C  +   +A +L++ M ++   P+   +  L++ +C+   
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 340

Query: 489 FDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            D A ++  EM     + P  +  + L  G    GK   A +L  +M  +GL
Sbjct: 341 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGL 392



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 141/291 (48%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   I+ NV+T + ++ +  K    E + +V + M + G  P V  +N ++ G      
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M ++G +P+ ++++ LI G  K GKL E+ +I SEM     +P++  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+    +    +  +SL++EM+R G   D L +  LILGLC+ GK K A+   K + K+ 
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN   Y+ L+ G C     E+A  L+  M    C P+   +  L+   C+    +   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++   M      P+ I  S L  GL   G+ E A+++F  M   G  P  +
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKY 291



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 131/291 (45%), Gaps = 14/291 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFD 197
           +++HS    ++T N       ++L  +  +   +   KLF+++    R     P  + F 
Sbjct: 211 MKSHSCSPDVVTYN-------TLLDAVCKARRVEEGCKLFEAM----RAAGYVPNVITFS 259

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L        +   A + F  M + G  P   +    +S L  +E+V  A   +++M + 
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQA 319

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKGLLSL 316
            I P+    N ++  +CK G ++ A ++++ M    G  P++ T+NTLI G C  G L  
Sbjct: 320 CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGR 379

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +    M   G+  +  T+  LI G  +  KL EA  ++ +M+      + V+  + + 
Sbjct: 380 ANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVG 439

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           G  + GN +   +++E   ++G   +  T+  L   L K G+ + A  L++
Sbjct: 440 GLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 89/243 (36%), Gaps = 38/243 (15%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   +   ++F S+L +   C  +   +  L       +K   A + F +M 
Sbjct: 260 TLIHGLCRTGELEKALEVFGSMLEA--GCKPNKYTYTTLISGLCRAEKVIQARELFEKMT 317

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGII 279
                P   + N  ++       +D A   Y+EM     + P + T N ++  FCKLG +
Sbjct: 318 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 377

Query: 280 ERA-----------------------------------VEVFKNMESMGFIPSVTTYNTL 304
            RA                                   +EV+K M    F+    +  + 
Sbjct: 378 GRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 437

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           + G C  G +  A        K+G  PN  TF  L     K G++ +A ++    KA ++
Sbjct: 438 VGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497

Query: 365 SPN 367
           +  
Sbjct: 498 TAQ 500


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 197/435 (45%), Gaps = 73/435 (16%)

Query: 172 FDLPSKLF-DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           F  P + F +  + +Y+   S P  FDLL          R       ++R YG  P  E+
Sbjct: 185 FPSPHRHFVEHYISTYKAFSSDPASFDLLLLCLPSAPLLR-------RVRQYGISPSPEA 237

Query: 231 CNKFLSSL-LD--------------------------SERVDIALGFYKEMRRNRISPNV 263
           CN  LS L LD                          + RV+ A   + EM      P+V
Sbjct: 238 CNAVLSRLPLDEAIELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDV 294

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN--------------------- 302
            T  +++H +C LG +E AV++  +M + G  P+ T Y                      
Sbjct: 295 VTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVED 354

Query: 303 --------------TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
                         T++SG CNKG L  A ++ + M++ G+  + +T+ TLI G C+ G+
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGE 414

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L EA ++  EM A  +  + VTY  L++GY + G       ++  M++ G+  +++TY A
Sbjct: 415 LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTA 474

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L  GLCK+G  + A  L+ ++    L  NA TY++LI G C     ++A +    M  +G
Sbjct: 475 LSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +P+ + +  L+   C++ + DRA ++L EML+  + P  +  + L +G    G+ E   
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594

Query: 529 KLFRKMEIRGLLPKG 543
           KL   M  + + P  
Sbjct: 595 KLLEWMLEKNIHPNA 609



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 165/345 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V+  +   + ++    +A   F +M+  G      +    ++ L  +  +  A    +EM
Sbjct: 366 VYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM 425

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+  +  T  +++  +CK G +  A +V   M   G  P+V TY  L  G C +G +
Sbjct: 426 LARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDV 485

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  + M   G++ N  T+N+LI G CK G L +A R  ++M A  + P+V TY TL
Sbjct: 486 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTL 545

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   + G  +    L +EML NGIK  I+TYN L+ G C  G+ +    L++ + + ++
Sbjct: 546 IDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNI 605

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PNA+TY++L+   C+  N +   ++YK M      PN++ + +L+   C+      A  
Sbjct: 606 HPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQY 665

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              EM+EK     +   S L   L+   K   A KLF  M   G 
Sbjct: 666 FHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGF 710



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 153/321 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   Y    +  NA      M   G  P        ++ L D  RV  AL   ++
Sbjct: 295 VTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVED 354

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  +++  +      V+  FC  G +  A   F  M+  G      TY TLI+G C  G 
Sbjct: 355 MVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGE 414

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K    M    +  + +T+  L+ G+CK+GK+ EA ++ + M    V+PNVVTY  
Sbjct: 415 LKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTA 474

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L +G  + G+ +    L  EM   G++++  TYN+LI GLCK G   +A   + D+D   
Sbjct: 475 LSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG 534

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY+ LI   C     +RA  L + M+ +G +P    + +LM+ FC +   +   
Sbjct: 535 LKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGK 594

Query: 494 EVLLEMLEKCMAPDSIILSEL 514
           ++L  MLEK + P++   + L
Sbjct: 595 KLLEWMLEKNIHPNATTYNSL 615



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 142/328 (43%), Gaps = 3/328 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +       K+   +L   R  D   + + +L   Y  R K   A      M 
Sbjct: 404 TLINGLCRAGELKEAEKVLQEMLA--RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMV 461

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +       L     V  A     EM    +  N  T N +++  CK G ++
Sbjct: 462 QRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLD 521

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+    +M++ G  P V TY TLI   C  G L  A      M  NGI+P ++T+N L+
Sbjct: 522 QAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLM 581

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC  G++    ++   M   N+ PN  TYN+L+  Y    N +    +Y+ M    ++
Sbjct: 582 NGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVE 641

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +  TYN LI G CK    K+A Y   ++ +      AS+YSALI     +K    A +L
Sbjct: 642 PNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKL 701

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +  M + G      ++   +  F  NED
Sbjct: 702 FHDMRKEGFTAEPDVYNFYID-FNFNED 728



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 110/236 (46%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  +  +D A+    +M    + P+VYT   ++ A CK G ++RA ++ + M  
Sbjct: 508 NSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLD 567

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ TYN L++G C  G +    K    M +  I PN  T+N+L+  +C    +  
Sbjct: 568 NGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKS 627

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              I+  M + NV PN  TYN LI G+ +  + +     + EM+  G ++   +Y+ALI 
Sbjct: 628 TTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIR 687

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L K+ K  +A  L  D+ K         Y+  I       N E    L   ++ +
Sbjct: 688 LLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEA 743


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 174/346 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L  + A  K +        QM  +G  P + + N  ++S     RV  A     ++ 
Sbjct: 68  FAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKIL 127

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  G  S
Sbjct: 128 KLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTS 187

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++    ME+   QP+V+ + ++I   CK  ++ EA  +FS+M    +SP++ TY +L+
Sbjct: 188 AAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +    +   +   +L  +M+ + I  D++ ++ ++  LCKEGK  +A  +V  + +  + 
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+ G C++   + A +++  M+R G  P+   +  L++ +C+    D+A  +
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  K   PD+   + L  GL H G+ + A+ LF +M  RG +P
Sbjct: 368 FEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMP 413



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 169/351 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +++  +  +    ++   A + F QM   G  P I +    + +L +        
Sbjct: 201 CQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVT 260

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  ++I P+V   + V+ A CK G +  A E+   M   G  P V TY TL+ GH
Sbjct: 261 TLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGH 320

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  ++M + G  P+VI++ TLI G+CK  K+ +A  +F EM      P+ 
Sbjct: 321 CLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDT 380

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYNTL+ G   VG  +   +L+ EM+  G   D++TY+ L+  LCK    ++A  L+K 
Sbjct: 381 KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKA 440

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ ++L P+   Y+ +I G C     E A  L+ ++   G  P+   + +++   C+   
Sbjct: 441 IEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            + A ++ +EM     +PD    + +  G     +   A++L  +M  RG 
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/309 (27%), Positives = 156/309 (50%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + SL    +V  A   + +M    ISP+++T   ++HA C L   +    +   M +   
Sbjct: 212 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 271

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P V  ++T++   C +G ++ A +  ++M + G++P+V+T+ TL+ G C + ++ EA +
Sbjct: 272 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 331

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  M     +P+V++Y TLINGY ++   +    L+EEM R     D  TYN L+ GLC
Sbjct: 332 VFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLC 391

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
             G+ + A  L  ++     +P+  TYS L+   C  ++ E A  L K++  S   P+  
Sbjct: 392 HVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQ 451

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ++ +++   C+  + + A ++   +  K + P     + +  GL   G    A KLF +M
Sbjct: 452 VYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEM 511

Query: 535 EIRGLLPKG 543
           +     P G
Sbjct: 512 DGNDCSPDG 520



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 163/340 (47%), Gaps = 13/340 (3%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++++ T    QM +   LP +   +  + +L    +V  A      M +  + P+V T  
Sbjct: 255 EWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYT 314

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M   C    ++ AV+VF  M   GF P V +Y TLI+G+C    +  AM     M + 
Sbjct: 315 TLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRK 374

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
              P+  T+NTL++G C  G+L +A  +F EM A    P++VTY+ L++   +  + E  
Sbjct: 375 EWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEA 434

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +L + +  + +  DI  YN +I G+C+ G+ + A  L  +L    L P+  TY+ +I G
Sbjct: 435 MALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHG 494

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C R     A +L+  M  + C P+   +  +   F QN +  RA ++L EML +  + D
Sbjct: 495 LCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           S  L      L    +D+    +F        +P+GFD L
Sbjct: 555 SCFLM-----LSVLSEDDRRYFIF--------IPEGFDLL 581



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 19/334 (5%)

Query: 76  GQDLDFVNIAYSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV 130
           GQ +      Y+ L+H+     +WK +T L   +       V  K+  D V+   F T V
Sbjct: 233 GQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM-------VNSKILPDVVI---FSTVV 282

Query: 131 QTHKPSSLTLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
                     E H IV  ++ +  +    +  +++ G       D   K+FD ++     
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFA 342

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            D   + +  L   Y    K   A   F +M    ++P  ++ N  +  L    R+  A+
Sbjct: 343 PDV--ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM      P++ T ++++ + CK   +E A+ + K +E+    P +  YN +I G 
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A    + +   G+ P+V T+N +I G CK+G L+EAN++F EM   + SP+ 
Sbjct: 461 CRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDG 520

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            TYNT+  G+ Q   +     L EEML  G   D
Sbjct: 521 CTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 173/359 (48%), Gaps = 22/359 (6%)

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
           A R +  +A + +C++R++                      D A     EMR      N 
Sbjct: 220 AARGRHGSALEAYCKVREF----------------------DTAKKVLVEMRERGCGLNT 257

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
            T N+++   C+ G +E A    K+ME  G +P   TY  LI+G C     + A    + 
Sbjct: 258 VTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDE 317

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M    ++PNV+ +  LI GF ++G   EA ++  EM A  V PN +TY+ L+ G  ++G 
Sbjct: 318 MSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ 377

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +  + L ++M+R+  + D +TYN +I G  +    K A  L+ +++   + PN  TYS 
Sbjct: 378 MDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSI 437

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           +I G C     E+A  L + M   G +PN  ++  L+S +C+  +   A E+  +M +  
Sbjct: 438 MIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN 497

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           + PD    + L  GL   G+ E + K F +M+ RGLLP  F     I+   +NG+ ES 
Sbjct: 498 VLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESA 556



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 159/333 (47%), Gaps = 35/333 (10%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A     EM    ISPNVYT ++++H  C+ G  E+A ++ + M + G  P+   Y  LIS
Sbjct: 416 AFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLIS 475

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G +SLA +  + M K  + P++  +N+LIFG  K G++ E+ + F++M+   + P
Sbjct: 476 GYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLP 535

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK------VDIL---------------- 404
           N  TY+ LI+GY + G+ E    L + ML  G+K      +D+L                
Sbjct: 536 NEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTF 595

Query: 405 -------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
                         Y  LI  L   G  + A  ++  ++KN  VP+   YS+LI+G C  
Sbjct: 596 KSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKT 655

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + E+AF +   M + G  PN   +  L+   C++ D   A  V   +L K + P+ +  
Sbjct: 656 ADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTY 715

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + L  G    G    A  L+ +M   G+ P  F
Sbjct: 716 TSLIDGSCKVGDISNAFYLYNEMLATGITPDAF 748



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 150/298 (50%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            D A    KEM    + PN  T + ++   CK+G ++RA  + K M      P   TYN 
Sbjct: 343 ADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNL 402

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I GH        A +  + ME  GI PNV T++ +I G C+ G+  +A+ +  EM    
Sbjct: 403 IIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 462

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PN   Y  LI+GY + GN  +   ++++M +  +  D+  YN+LI GL K G+ +++ 
Sbjct: 463 LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEEST 522

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                + +  L+PN  TYS LI G     + E A QL + M+ +G +PN  I+  L+ ++
Sbjct: 523 KYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESY 582

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +++D ++ +     ML++ +  D+ I   L   L   G  E A ++   +E  G +P
Sbjct: 583 FKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 162/342 (47%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + Y   ++F  A     +MR+ G      + N  ++ L  S  V+ A GF K+M    +
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+ +T   +++  CK      A  +   M      P+V  Y  LI G   +G    A K
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M   G+QPN IT++ L+ G CK G++  A+ +  +M   +  P+ +TYN +I G+ 
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +  + +    L  EM   GI  ++ TY+ +I GLC+ G+ +KA+ L++++    L PNA 
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            Y+ LI+G C   N   A +++  M +    P+ + +  L+    +    + + +   +M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+ + P+    S L  G    G  E A +L ++M   GL P
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 570



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/414 (24%), Positives = 182/414 (43%), Gaps = 37/414 (8%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++++RG+      D  S L   ++      D+  + ++L+ + +      ++A     +M
Sbjct: 366 DNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT--ITYNLIIEGHFRHHSKKDAFRLLSEM 423

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            + G  P + + +  +  L  S   + A    +EM    + PN +    ++  +C+ G +
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A E+F  M  +  +P +  YN+LI G    G +  + K+   M++ G+ PN  T++ L
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G+ K G L  A ++   M  T + PN V Y  L+  Y +  + E  +S ++ ML  G+
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603

Query: 400 KVD-----------------------------------ILTYNALILGLCKEGKTKKAAY 424
            +D                                   +  Y++LI GLCK    +KA  
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           ++ ++ K  + PN   Y+ALI G C   +   A  ++ S++  G  PN   +  L+   C
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D   A  +  EML   + PD+ + S L +G    G  E AM L  +M +RG
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 170/366 (46%), Gaps = 3/366 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V+  L   Y        A + F +M     LP +   N  +  L    RV+ +  ++ +
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKG 312
           M+   + PN +T + ++H + K G +E A ++ + M   G  P+   Y  L+  +  +  
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +  ++  FK+++++  +  N I +  LI      G +  A R+ S ++     P+V  Y+
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRI-YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYS 646

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+G  +  + E    + +EM + G+  +I+ YNALI GLCK G    A  +   +   
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            LVPN  TY++LI G C   +   AF LY  M+ +G  P+  ++ +L +      D ++A
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
             ++ EM  +  A  S   + L  G    GK +  +KL   +  RGL+P        I+ 
Sbjct: 767 MFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 825

Query: 553 APENGE 558
             E G+
Sbjct: 826 LSEAGK 831



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 179/416 (43%), Gaps = 39/416 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S ++H   KN   +S+E +++ +LD+                      + +++  L +
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTG------------------LKPNDVIYIDLLE 580

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           +Y         + TF  M D G +         + +L  S  ++ A      + +N   P
Sbjct: 581 SYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP 640

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V+  + ++   CK    E+A  +   M   G  P++  YN LI G C  G +S A    
Sbjct: 641 DVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVF 700

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N +   G+ PN +T+ +LI G CK G +  A  +++EM AT ++P+   Y+ L  G    
Sbjct: 701 NSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSA 760

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ E    L EEM   G    I ++N L+ G CK GK ++   L+  +    LVPNA T 
Sbjct: 761 GDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTI 819

Query: 442 SALITG---------------QCVRKNSERAFQ----LYKSMIRSGCRPNKHIFEMLMST 482
             +I+G               +  +K SE A +    L+  MI  G  P   + +M+   
Sbjct: 820 ENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMI-RD 878

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            C+  + D+A  +   ++ K           +   L   GK   A+ L ++M+ RG
Sbjct: 879 HCKEGNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 22/368 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + K +  A     +M   G  P     N F+ S+   E++    
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D+A   Y EM       N   +       C +G  ++A ++ K M   GF+P  +TY+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C+   +  A      M+  G+ P+V T+  LI  FCK G + +A  +F EM++ 
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP VVTY  LI+ Y +         ++  M+  G + + +TY AL+ GLCK G   KA
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                D+++L PN  TY AL+ G C     + A +L  +M+ 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN  +++ L+  FC+    D A EV L+M +    P     + L   +   G+ +L
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 527 AMKLFRKM 534
           AMK+  +M
Sbjct: 533 AMKVLSQM 540



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 14/412 (3%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S T+ T++ ++H   K ++   +  I   ++D+     P+ +    L    +C +  +  
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC--RPNDVTYGALVD-GLCKAGNI-- 409

Query: 197 DLLFKTYAHRKKFRNATDTF----CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              F+ YA      ++ D+     C+ R +   P + +    +  L  + +VD A     
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDR-HTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            M  +   PN    + ++  FCK G I+ A EVF  M   G++PSV TY +LI      G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L LAMK  + M K+   PNV+T+  +I G C+ G+  +A ++ S M+    SPNVVTY 
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+G G+ G  ++   L+ +M R G   + +TY  LI  LC  G   KA  L+ ++ + 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
                   Y   I G    K+   +  + + M   G  P   ++ ML+  F +    + A
Sbjct: 649 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 493 AEVLLEMLE--KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            E+  EM+E    +  D+ + + L   L    + E A +L+ +M  RG +P+
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPE 758



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 6/337 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D   +L D++L S   C+ + +V+D L   +    K  +A + F QM 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSS--GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+LP + +    +  +    R+D+A+    +M ++  +PNV T   ++   C++G  E
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+++   ME  G  P+V TY  LI G    G + L++     M + G  PN +T+  LI
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C  G L +A  +  EMK T     +  Y   I G+ +   + +G  + EEM   G  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTV 684

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDK--NSLVPNASTYSALITGQCVRKNSERAF 458
                Y  LI    K G+ + A  L K++ +  +S+  +   Y++LI   C+    E AF
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 744

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +LY  M R G  P   +F  L+    + + +D A ++
Sbjct: 745 RLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 12/313 (3%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK---LGIIERAVEVFK 287
           C   +S L+++   D A+ F   MR N   PNV T   ++  F K   LG  +R + +  
Sbjct: 110 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINM-- 167

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M + G  P+ + +N+L+  +CN+   + A K  N M   G  P  + +N  I   C + 
Sbjct: 168 -MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 226

Query: 348 KLHE------ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           KL        A +I+ EM A N   N V           VG  +    L +EM+R G   
Sbjct: 227 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 286

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY+ +I  LC   K +KA  L +++    + P+  TY+ LI   C     E+A  L+
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC P    +  L+  + + +   +A ++   M++    P+ +    L  GL   
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 522 GKDELAMKLFRKM 534
           G    A +++ K+
Sbjct: 407 GNISKAFEVYAKL 419



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 151/371 (40%), Gaps = 44/371 (11%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D+   ++D+G+ P   + N  +  L  + +VD+     KEM  +    + +T+    H
Sbjct: 24  AGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 83

Query: 272 AFCKLG-------IIER-------------------------AVEVFKNMESMGFIPSVT 299
           A CK G       +IER                         A+     M     IP+V 
Sbjct: 84  ALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVV 143

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY TL+SG   K  L    +  N+M   G  PN   FN+L+  +C +     A ++ + M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSE---------MGASLYEEMLRNGIKVDILTYNALI 410
                 P  V YN  I   G +   E         +   +Y EML     ++ +      
Sbjct: 204 TTCGCPPGYVVYNIFI---GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             LC  GK  KA  L+K++ +   VP+ STYS +IT  C     E+AF L++ M   G  
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+ + + +L+ +FC+    ++A  +  EM     +P  +  + L        +   A  +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 531 FRKMEIRGLLP 541
           F +M   G  P
Sbjct: 381 FHRMVDAGCRP 391



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 34/209 (16%)

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
           H A      +K     P+ VTYN L+      G  ++G  + +EM  +G  +D  T    
Sbjct: 22  HAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCF 81

Query: 410 ILGLCKEGKTKKAAYLVKDLD--------------------------------KNSLVPN 437
              LCKEG+   A  +++  D                                 NS +PN
Sbjct: 82  AHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPN 141

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY  L++G   +K      ++   M+  GC PN  +F  L+ ++C  +D+  A + LL
Sbjct: 142 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK-LL 200

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL 526
             +  C  P   ++  ++ G   CG+++L
Sbjct: 201 NRMTTCGCPPGYVVYNIFIG-SICGQEKL 228


>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
 gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
          Length = 614

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 2/326 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L +      K  +A + F +M   G  P + + N  +S +  +  ++ A      M 
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMA 306

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P+VYT    M   CK G I+ AVE+F+ M   G  P+   + TLI  HC +G ++
Sbjct: 307 KAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVA 366

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             ++    M   GI+ +++ +N L  G C+   L  AN I  EM+   + P+ VTY TLI
Sbjct: 367 AGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLI 426

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ + G  +M   + +EM   G+ +D +TY  LI GL K G++  +  ++ ++ +  L 
Sbjct: 427 DGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLE 486

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ +I   C   + +  F+L K M   G +P    + ++M+ FC       A  +
Sbjct: 487 PDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADML 546

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC 521
           L  ML   + PD I  + L  G  HC
Sbjct: 547 LNAMLNIGVCPDDITYNILLDG--HC 570



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 148/295 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  FY ++    + P     NM+M    + G +  A  +F  M   G  P+V T+NTL+S
Sbjct: 228 AYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMS 287

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    L+ A   + LM K G+ P+V T+   + G CK G++ +A  +F EM+   V+P
Sbjct: 288 GMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNP 347

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V + TLI+ + + GN   G  L+ EM   GIK D++ YNAL  GLC+    K A  +V
Sbjct: 348 NTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIV 407

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++  N L P+  TY+ LI G C     + A ++ + M   G   ++  +  L+S   ++
Sbjct: 408 EEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKS 467

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                +  +L EM+E  + PD+   + +          +   KL ++M+ +G  P
Sbjct: 468 GRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKP 522



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 151/326 (46%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + Q+ D G  P  +  N  +  ++ S ++  A   + EM R  + P V T N +M   CK
Sbjct: 232 YLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCK 291

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              +  A  +   M   G  P V TY   + G C  G +  A++    M + G+ PN + 
Sbjct: 292 ASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F TLI   CK+G +     +  EM    +  ++V YN L NG  +V + +    + EEM 
Sbjct: 352 FTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR 411

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            NG+K D +TY  LI G CKEG+   A  + +++    +  +  TY+ LI+G      S 
Sbjct: 412 NNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSV 471

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            + ++   M+ +G  P+   + M++  FC+N D     ++L EM  K   P  +  + + 
Sbjct: 472 DSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVM 531

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +G    G+ + A  L   M   G+ P
Sbjct: 532 NGFCILGQMKNADMLLNAMLNIGVCP 557



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 134/288 (46%)

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           +L  +  A   +  +   G  P    +N L+      G L+ A    + M + G+ P V+
Sbjct: 221 RLPSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVV 280

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFNTL+ G CK   L+ AN +   M    V+P+V TY   + G  + G  +    ++EEM
Sbjct: 281 TFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEM 340

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G+  + + +  LI   CKEG       L +++    +  +   Y+AL  G C  ++ 
Sbjct: 341 RERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDL 400

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A  + + M  +G +P+K  +  L+  FC+  + D A E+  EM ++ +A D +  + L
Sbjct: 401 KAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTL 460

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            SGL   G+   + ++  +M   GL P        I+   +N + ++G
Sbjct: 461 ISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTG 508



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 9/140 (6%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           +DSER+        EM    + P+  T  MV+ AFCK   ++   ++ K M++ G  P V
Sbjct: 471 VDSERI------LCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGV 524

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN +++G C  G +  A    N M   G+ P+ IT+N L+ G CK GK+ +A  + S 
Sbjct: 525 VTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS- 583

Query: 359 MKATNVSPNVVTYNTLINGY 378
             A  +  +   Y +LIN +
Sbjct: 584 --AKGMVSDFGLYTSLINEF 601



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
            C+M + G  P   +    + +   +  V       KEM+     P V T N+VM+ FC 
Sbjct: 477 LCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCI 536

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           LG ++ A  +   M ++G  P   TYN L+ GHC  G +  A + K+     G+  +   
Sbjct: 537 LGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEELKS---AKGMVSDFGL 593

Query: 336 FNTLIFGFCKK 346
           + +LI  F KK
Sbjct: 594 YTSLINEFVKK 604


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 171/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +  R +   A     +M   G+ P I + +  L+    S+R+  A+    +M 
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T N ++H          AV +   M + G  P + TY  +++G C +G   
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA    N ME+  ++P V+ + T+I G CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 239 LAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLI 298

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L  +M+   I  D+ T++ALI    KEGK  +A  L  ++ K S+ 
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+LI G C+    + A Q+++ M+   C P+   +  L+  FC+ +  D   E+
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMEL 418

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM ++ +  +++  + L  GL   G  ++A ++F++M   G+ P
Sbjct: 419 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP 464



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 173/346 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L++  +       K   +A + F +M   G  P + + +  +S L +  R   A     +
Sbjct: 257 LIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +I+P+V+T + ++ AF K G +  A +++  M      PS+ TY++LI+G C    
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    M      P+V++++TLI GFCK  ++ E   +F EM    +  N VTY T
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G  Q G+ +M   +++EM+ +G+  +I+TYN L+ GLCK GK +KA  + + L ++ 
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P   TY+ +I G C     E  + L+ ++   G +P+   +  ++S FC+    + A 
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  EM E    P+S   + L       G  E + +L ++M   G 
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 184/381 (48%), Gaps = 16/381 (4%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +S R+ ++  LV  +           F T  H      K   A     +M  
Sbjct: 155 SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVA 214

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L      D+A     +M + ++ P V     ++   CK   ++ 
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDD 274

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +FK ME+ G  P+V TY++LIS  CN G  S A +  + M +  I P+V TF+ LI 
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GKL EA +++ EM   ++ P++VTY++LING+      +    ++E M+      
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+++Y+ LI G CK  +  +   L +++ +  LV N  TY+ LI G     + + A +++
Sbjct: 395 DVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIF 454

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHH 520
           K M+  G  PN   +  L+   C+N   ++A  V+ E L++  M P     + +  G+  
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCK 513

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            GK E    LF  + ++G+ P
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKP 534



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 155/299 (51%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A+  + EM ++R  P++   + ++ A  K+   +  + + + M+++G   +  TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI+  C +  L LA+     M K G +PN++T ++L+ G+C   ++ EA  +  +M  T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN VT+NTLI+G      +    +L + M+  G + D++TY  ++ GLCK G T  A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+  +++  L P    Y+ +I G C  K+ + A  L+K M   G RPN   +  L+S 
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C    +  A+ +L +M+E+ + PD    S L       GK   A KL+ +M  R + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 162/327 (49%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  L  ++ +D AL  +KEM    I PNV T + ++   C  G    A  +  +M     
Sbjct: 263 IDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P V T++ LI     +G L  A K  + M K  I P+++T+++LI GFC   +L EA +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  M + +  P+VV+Y+TLI G+ +    + G  L+ EM + G+  + +TY  LI GL 
Sbjct: 383 MFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLF 442

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           + G    A  + K++  + + PN  TY+ L+ G C     E+A  +++ + RS   P  +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +++   C+    +   ++   +  K + PD +  + + SG    G  E A  LF++M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562

Query: 535 EIRGLLPKGFDKLRTINCAPENGEKES 561
           +  G LP        I     +G++E+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREA 589



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 157/312 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P++ T +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A ++F+ M S    P V +Y+TLI G C    +   M+    M + 
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+ TLI G  + G    A  IF EM +  V PN++TYNTL++G  + G  E  
Sbjct: 426 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + R+ ++  I TYN +I G+CK GK +    L  +L    + P+   Y+ +I+G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C + + E A  L+K M   G  PN   +  L+    ++ D + +AE++ EM     A D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605

Query: 508 SIILSELYSGLH 519
           +  +  + + LH
Sbjct: 606 ASTIGLVTNMLH 617



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 139/282 (49%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  +     F  L   +    K   A   + +M      P I + +  ++     +R+D 
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ M      P+V + + ++  FCK   ++  +E+F+ M   G + +  TY TLI 
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQ 439

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G   +A +    M  +G+ PN++T+NTL+ G CK GKL +A  +F  ++ + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TYN +I G  + G  E G  L+  +   G+K D++ YN +I G C++G  ++A  L 
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           K++ ++  +PN+  Y+ LI  +    + E + +L K M   G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 132/264 (50%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL+D ++   R  D S + +  L   +    +   A   F  M      P + S +  + 
Sbjct: 347 KLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIK 404

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               ++RVD  +  ++EM +  +  N  T   ++    + G  + A E+FK M S G  P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPP 464

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++ TYNTL+ G C  G L  AM     ++++ ++P + T+N +I G CK GK+ +   +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V P+VV YNT+I+G+ + G+ E   +L++EM  +G   +   YN LI    ++
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G  + +A L+K++       +AST
Sbjct: 585 GDREASAELIKEMRSCGFAGDAST 608


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 180/411 (43%), Gaps = 58/411 (14%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER----- 243
           C  SP++F+ L   Y     +  A     +M   G+ P     N  +  +  +E      
Sbjct: 7   CYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSME 66

Query: 244 -VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            + +A   Y EM    +  N   +       C +G  E+A  V + M S GFIP  +TY+
Sbjct: 67  VIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYS 126

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I   CN   +  A +    M++NGI P+V T+ TL+  FCK G + +A   F EM+  
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PNVVTY  LI+ Y +         ++E ML NG   +I+TY ALI G CK G+T+KA
Sbjct: 187 GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKA 246

Query: 423 AYL----------VKDLDKNSLV-------PNASTYSALITGQCVRKNSERAFQLYKSMI 465
             +          + D+D    +       PN  TY AL+ G C     + A  L ++M 
Sbjct: 247 CQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMS 306

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAE------------------------------- 494
             GC PN+ I++ L+  FC+    D A E                               
Sbjct: 307 LEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLD 366

Query: 495 ----VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               VL +MLE   AP+ +I +E+  GL   GK + A +L   ME +G  P
Sbjct: 367 LALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYP 417



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 59/398 (14%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A +   +M   GF+P   + +K +  L ++ +V+ A   ++EM+RN I+P+VYT  
Sbjct: 102 KFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYT 161

Query: 268 MVMHAFCKLGIIE-----------------------------------RAVEVFKNMESM 292
            ++  FCK+G+IE                                   RA E+F+ M S 
Sbjct: 162 TLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN 221

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI-----------------QPNVIT 335
           G +P++ TY  LI GHC  G    A +    M+ + +                 +PNV+T
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT 281

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  L+ G CK  K+ EA  +   M      PN + Y+ LI+G+ +VG  +    ++ +ML
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G   ++ TY++LI  L K+ +   A  ++  + +NS  PN   Y+ ++ G C    ++
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A++L   M   GC PN   +  ++  F +    DR  E+L  M  K  AP+ I    L 
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVL- 460

Query: 516 SGLHHCGKDEL---AMKLFRKMEIRGLLPKGFDKLRTI 550
             ++HC    L   A KL  +M+ +   PK     R +
Sbjct: 461 --INHCCAAGLLDDAHKLLEEMK-QTYWPKHIGMYRKV 495



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 3/307 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + +++D L   +    K   A + F +M  +G  P + + +  +  L   +R+D+AL
Sbjct: 310 CEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLAL 369

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  N  +PNV     ++   CK+G  + A  +   ME  G  P+V TY  +I G 
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGF 429

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +   ++   LM   G  PN IT+  LI   C  G L +A+++  EMK T    ++
Sbjct: 430 GKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHI 489

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             Y  +I G+     + +G  L  E+  +G    +  Y  LI    K G+ + A  L ++
Sbjct: 490 GMYRKVIEGFSHEFVASLG--LLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEE 547

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L   S     +TY +LI    +    ++AF+LY  M R G  P   +   L+    +   
Sbjct: 548 LSSFS-AAYQNTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGK 606

Query: 489 FDRAAEV 495
           ++ A ++
Sbjct: 607 WEEALQL 613



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 141/317 (44%), Gaps = 3/317 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +  L  + +V  A    + M      PN    + ++  FCK+G ++ A EV
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G  P+V TY++LI        L LA+K    M +N   PNV+ +  ++ G CK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK  EA R+   M+     PNVVTY  +I+G+G+ G  +    L + M   G   + +T
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C  G    A  L++++ +     +   Y  +I G         +  L   + 
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEG--FSHEFVASLGLLAELS 514

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  P   ++++L+  F +    + A E+  E+     A  +  +S + S    C  D+
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDK 574

Query: 526 LAMKLFRKMEIRGLLPK 542
            A KL+  M  RG +P+
Sbjct: 575 -AFKLYSDMTRRGFVPE 590



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 109/253 (43%), Gaps = 6/253 (2%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M + G  PS   +N+L+  +C  G    A K    M   G QP  + +N LI G C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 349 LHE------ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           L        A R ++EM    V  N V           +G  E   ++  EM+  G   D
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             TY+ +I  LC   K +KA  L +++ +N + P+  TY+ L+   C     E+A   + 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + GC PN   +  L+  + +     RA E+   ML     P+ +  + L  G    G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 523 KDELAMKLFRKME 535
           + E A +++ +M+
Sbjct: 242 ETEKACQIYARMK 254



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 12/249 (4%)

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ-- 380
           +M   G  P+ + FN+L+  +C+ G    A ++  +M      P  V YN LI G     
Sbjct: 1   MMITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTE 60

Query: 381 -------VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
                  +G +E     Y EML  G+ ++ +        LC  GK +KA  +++++    
Sbjct: 61  DLPSMEVIGLAERA---YNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKG 117

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +P++STYS +I   C     E+AFQL++ M R+G  P+ + +  L+  FC+    ++A 
Sbjct: 118 FIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQAR 177

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
               EM +   AP+ +  + L        K   A ++F  M   G +P        I+  
Sbjct: 178 NWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGH 237

Query: 554 PENGEKESG 562
            + GE E  
Sbjct: 238 CKAGETEKA 246


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 171/331 (51%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A  +F +M D    P I   N+ LSS++  ++ +  +  +KEM    I  NV TL++++
Sbjct: 23  DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILI 82

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           + FC L  ++    VF      GF P V  + TLI G C  G   LA      M   G  
Sbjct: 83  NCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCV 142

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+V+T N+L+ G+C +GK+ +  +IF  M +  + P+V +Y+  INGY +V   +    L
Sbjct: 143 PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMEL 202

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++EM   G+  + +TYN LI  LC+  + + A  L + +    L P+   YS L+ G C 
Sbjct: 203 FDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCK 262

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           + N +    L++ M R   +P+  ++ ++++  C++     A EVL  ++ + + PD   
Sbjct: 263 QGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHT 322

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + L  GL   G    A++LFRKME  G +P
Sbjct: 323 YTALVDGLCREGSIIEALRLFRKMEEDGCMP 353



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 150/287 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P +      +  +    + ++A G  KEM      P+V T N +M  +C  G I++ 
Sbjct: 105 GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKV 164

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++F  M S G  P V +Y+  I+G+C    +  AM+  + M   G+ PN +T+NTLI  
Sbjct: 165 RKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKA 224

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+  +  +A  +F +M A  +SP+++ Y+TL++G+ + GN +    L++EM R  +K D
Sbjct: 225 LCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPD 284

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ Y  +I G+C+  K K A  ++  L    L P+  TY+AL+ G C   +   A +L++
Sbjct: 285 LVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFR 344

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            M   GC P    + +L+    Q+ D     +++ EM ++    D++
Sbjct: 345 KMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAV 391



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 168/372 (45%), Gaps = 17/372 (4%)

Query: 179 FDSILYSY-RMCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF------LPI 227
            D  L S+ RM D +P    + F+ L  +    KK+      F +M   G       L I
Sbjct: 21  LDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +C  FL        VD     + +  +    P+V     ++   C++G  E A  + K
Sbjct: 81  LINCFCFL------HHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLK 134

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M  +G +P V T N+L+ G+C++G +    K  +LM   G++P+V +++  I G+CK  
Sbjct: 135 EMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVE 194

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K+ EA  +F EM    V PN VTYNTLI    Q         L+ +M   G+  DIL Y+
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ G CK+G   +   L +++ +  + P+   Y+ +I G C  +  + A ++   +I  
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+ H +  L+   C+      A  +  +M E    P S   + L  G          
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 528 MKLFRKMEIRGL 539
           ++L  +M  RG 
Sbjct: 375 VQLIHEMADRGF 386



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 2/296 (0%)

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF--DLLFKTYAHRKK 208
           T  R FK    I   ++D       ++L   +L    +    P V   + L + Y  + K
Sbjct: 101 TLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGK 160

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
                  F  M   G  P + S + F++     E++D A+  + EM    + PN  T N 
Sbjct: 161 IDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNT 220

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++ A C+      A  +F+ M + G  P +  Y+TL+ G C +G L   +     M++  
Sbjct: 221 LIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRL 280

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           ++P+++ +  +I G C+  K+ +A  + S +    + P+V TY  L++G  + G+     
Sbjct: 281 VKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEAL 340

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
            L+ +M  +G      +YN L+ G  +   T     L+ ++       +A T + L
Sbjct: 341 RLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 35/230 (15%)

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV----- 401
           G L +A   F+ M   N  P ++ +N L++   ++   E   SL++EM   GIK      
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 402 ------------------------------DILTYNALILGLCKEGKTKKAAYLVKDLDK 431
                                         D++ +  LI G+C+ GKT+ AA L+K++  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              VP+  T ++L+ G C +   ++  +++  M+  G +P+ + + + ++ +C+ E  D 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A E+  EM  + + P+++  + L   L    +   A  LFRKM   GL P
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSP 248



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 72/163 (44%)

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G  GN +   + +  ML    +  I+ +N L+  + +  K +    L K+++   +  N 
Sbjct: 16  GYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNV 75

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            T S LI   C   + +  F ++   ++ G +P+  IF  L+   C+    + AA +L E
Sbjct: 76  CTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKE 135

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M      PD +  + L  G    GK +   K+F  M  +GL P
Sbjct: 136 MGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKP 178


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 204/415 (49%), Gaps = 30/415 (7%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++SI++  L K+R+   +  + +             + D I Y+             
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFK------EMKAQGIMPDVISYTT------------ 342

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +    K+  A   F +M D G  P + + +  +  L    +V  A    + + +  
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+V T   ++   C    I +A ++F  M+ +G +P+V T  TL+ G C  G + +A+
Sbjct: 403 CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 462

Query: 319 KF-KNLMEKN---GI--QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +  KN++      GI  +PN I+++ +I G CK G+  EA  +F EMKA  V P+V++Y 
Sbjct: 463 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 522

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+G+ + G  +    L+ EM+  G++ D+ T++ LI  LCKEGK  +A  L++ + + 
Sbjct: 523 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 582

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             +PN  TY+ L+ G C+      A QL+  M + GC P+   +  LM   CQ  +   A
Sbjct: 583 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 642

Query: 493 AEVLLEMLEKC------MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+  +ML           PD I  S +  GL   G+++ A +LF++M+  G++P
Sbjct: 643 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 697



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 178/373 (47%), Gaps = 16/373 (4%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
            +KL + ++   R C    +    L K    + +   AT  F +M+  G +P + +C   
Sbjct: 391 ANKLLEVVIQ--RGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 448

Query: 235 LSSLLDSERVDIALGFYKEMRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           +  L  S  + IAL  +K M  +         PN  + ++++   CK G  + A E+FK 
Sbjct: 449 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 508

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+++G IP V +Y +LI G C  G    A    N M   G+QP+V TF+ LI   CK+GK
Sbjct: 509 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 568

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EAN +   M      PN VTY TL+ G            L+ +M + G   D++TY  
Sbjct: 569 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 628

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNS------LVPNASTYSALITGQCVRKNSERAFQLYK 462
           L+ GLC+ G  K A  L K +  ++        P+  +YS +I G C     + A +L+K
Sbjct: 629 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 688

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   G  PN   +  L+  FC++   + A  +  EM+++ +  +++  S +  G   C 
Sbjct: 689 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF--CK 746

Query: 523 KDELAMKLFRKME 535
           + ++   LF+KME
Sbjct: 747 EGQIDKALFQKME 759



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 201/433 (46%), Gaps = 53/433 (12%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-----YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           ++++G+  +   ++   L   +L     Y  + C  + + + ++       ++   A + 
Sbjct: 85  TLMKGLCQTGKINIALHLHQEMLNDTSQYGIK-CKPTLVSYSIIIDGLCKDRREDEAREL 143

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M+  G +P + S    +     S + + A   + EM    I  +V T +M++   CK
Sbjct: 144 FKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCK 203

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +  A E+ + M   G I  + TY+TLI G C K  +S A +    M+K G +P+ I 
Sbjct: 204 EGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIA 263

Query: 336 FNTLIFGFCKKG------KLH-----------------------------------EANR 354
           + TL+ G C+ G      +LH                                   EA  
Sbjct: 264 YGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 323

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F EMKA  + P+V++Y TLI+G+   G  E    L+ EML  GI+ D+ T + LI  LC
Sbjct: 324 LFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 383

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K+GK  +A  L++ + +   +P+  T + L+ G C++    +A QL+  M + GC PN  
Sbjct: 384 KKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 443

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKC------MAPDSIILSELYSGLHHCGKDELAM 528
               LM   CQ+ +   A E+   ML           P++I  S +  GL  CG+++ A 
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503

Query: 529 KLFRKMEIRGLLP 541
           +LF++M+  G++P
Sbjct: 504 ELFKEMKALGVIP 516



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 164/331 (49%), Gaps = 49/331 (14%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I P+V T  +++  FCK G +  A E+ + M   G I  + TY+TLI G C K  +S A 
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH---------------------------- 350
           +    M+K G +P+ I + TL+ G C+ GK++                            
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 351 -------------EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
                        EA  +F EMKA  + P+V++Y +LI+G+ + G  E    L+ EML  
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI+ D+ T + LI  LCKEGK  +A  L++ + +   + +  TYS LI G C++     A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE-------KCMAPDSII 510
            +L+ SM + GCRP+   +  LM   CQ  + + A ++  EML        KC  P  I 
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC-KPTLIS 304

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            S +  GL    +++ A +LF++M+ +G++P
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMP 335



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 182/402 (45%), Gaps = 47/402 (11%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + +  L K    + +   AT  F  M+  G  P   +    +  L  + +++I
Sbjct: 39  RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINI 98

Query: 247 ALGFYKEMRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           AL  ++EM  +      +  P + + ++++   CK    + A E+FK M++ G +P V +
Sbjct: 99  ALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS 158

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y +LI G C  G    A    N M   GI+ +V T + LI   CK+GK+ EAN +   M 
Sbjct: 159 YTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMI 218

Query: 361 ATNVSPNVVTYNTLING----------------------------YG-------QVGNSE 385
                 ++VTY+TLI G                            YG       Q GN  
Sbjct: 219 QRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNIN 278

Query: 386 MGASLYEEML----RNGIKVD--ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
               L++EML    R GIK    +++Y+ +I GLCK+ +  +A  L K++    ++P+  
Sbjct: 279 TALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVI 338

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +Y+ LI G C+    E+A  L+  M+  G +P+     +L+   C+      A ++L  +
Sbjct: 339 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 398

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +++   PD +  + L  GL    +   A +LF KM+  G +P
Sbjct: 399 IQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMP 440



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYS---YRM-CDSSPLVFDLLFKTYAHRKKFRNAT 213
           +  ++++G+  S +  +  +L  ++L     Y + C  + + + ++        +   A 
Sbjct: 444 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 503

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           + F +M+  G +P + S    +     S +   A   + EM    + P+V T ++++   
Sbjct: 504 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 563

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G +  A E+ + M   G IP+  TY TL+ G C    +S A +    M+K G  P+V
Sbjct: 564 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 623

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEM------KATNVSPNVVTYNTLINGYGQVGNSEMG 387
           +T+ TL+ G C+ G +  A  +  +M        TN  P+V++Y+ +I+G  + G  +  
Sbjct: 624 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 683

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L++EM   G+  ++++Y +LI G C+ GK + A +L  ++    +  NA TYS +I G
Sbjct: 684 RELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 743

Query: 448 QCVRKNSERAF 458
            C     ++A 
Sbjct: 744 FCKEGQIDKAL 754



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 132/261 (50%), Gaps = 10/261 (3%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M  +G  P VTT   LI   C +G +  A +   +M + G   +++T++TLI G C K +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN----GIKVD-- 402
           + EA ++F  MK     P+ + Y TL+ G  Q G   +   L++EML +    GIK    
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +++Y+ +I GLCK+ +  +A  L K++    ++P+  +Y++LI G C     E+A  L+ 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G R +     ML+   C+      A E+L  M+++    D +  S L  GL  C 
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL--CM 238

Query: 523 KDEL--AMKLFRKMEIRGLLP 541
           K  +  A +LF  M+  G  P
Sbjct: 239 KHRISEATRLFMSMQKLGCRP 259


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 165/330 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G  P I + NK +  L     V  +   + ++ +  + PN++T N+ + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C+ G I+ A  + +++ S G  P V +YNTLI G C    L  A  + + M  +G++P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N  T+NT+I GFCK G +  A++I  +       P+  TY++LING    G+     +++
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            E +  G K  I+ YN L+ GL K+G   +A  L+KD+ ++   P+  TY+ ++ G C  
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  +    I  GC P+   F  L+  +C+  + D+A E+L  ML   + PD I  
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +GL    K +  +  F+ M  +G  P
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 19/434 (4%)

Query: 110 KHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL 167
           KHV  +++ Q D + +L+ F  V+T      TLET+  ++  L  + KF++ E +L  + 
Sbjct: 8   KHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR 67

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
                ++ SK+ +              V+  + + Y  + K + A + F +M  Y   P 
Sbjct: 68  K----NVDSKMLEG-------------VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPS 110

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           ++S N  ++ L++      A   Y  M+   I P+VYT  + M +FC  G    A+ +  
Sbjct: 111 VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLN 170

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           NM   G   +  +Y  +ISG   +     A    + M K GI P+++TFN LI   CKKG
Sbjct: 171 NMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            + E+ ++FS++    V PN+ T+N  I G  + G  +  A L E ++  G+  D+++YN
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYN 290

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G CK  K  +A   +  +  + + PN  TY+ +I G C     + A ++ +  +  
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P++  +  L++  C + D +RA  V  E +EK      I+ + L  GL   G    A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410

Query: 528 MKLFRKMEIRGLLP 541
           ++L + M   G  P
Sbjct: 411 LQLMKDMMEHGCSP 424



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 191/395 (48%), Gaps = 20/395 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + ++H+L K    + SE                KLF  ++   R    +   F++  +
Sbjct: 218 TFNKLIHVLCKKGNVQESE----------------KLFSKVMK--RGVCPNLFTFNIFIQ 259

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               +     A      +   G  P + S N  +       ++  A  +  +M  + + P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-F 320
           N +T N +++ FCK G+++ A ++ ++    GFIP   TY++LI+G CN G ++ AM  F
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              MEK G + ++I +NTL+ G  K+G + +A ++  +M     SP++ TYN ++NG  +
Sbjct: 380 YEAMEK-GFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +G       +  + +  G   DI T+N LI G CK+    KA  ++  +  + + P+  T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G C  +  +     +K+M+  GC PN   + +L+ +FC++     A E+  EM 
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMK 558

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            + + PD + L  L  GL   G+ + A +LF  +E
Sbjct: 559 TRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 2/364 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD +L    +C    L F+ L      +   + +   F ++   G  P + + N F+  
Sbjct: 203 LFDEML-KQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L     +D A    + +    ++P+V + N ++  FCK   +  A      M + G  P+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYNT+I+G C  G++  A K        G  P+  T+++LI G C  G ++ A  +F 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E        +++ YNTL+ G  + G       L ++M+ +G   DI TYN ++ GLCK G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               A  ++ D      +P+  T++ LI G C ++N ++A ++  +M+  G  P+   + 
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++  C+    D   +    MLEK   P+ I  + L        K   AM+LF++M+ R
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560

Query: 538 GLLP 541
           GL P
Sbjct: 561 GLTP 564



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 164/332 (49%), Gaps = 1/332 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +  + GF   I   N  +  L     V  AL   K+M  +  SP+++T N+V++
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G +  A  +  +  + G IP + T+NTLI G+C +  +  A++  + M  +GI P
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +VIT+NTL+ G CK  KL      F  M     +PN++TYN LI  + +         L+
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCV 450
           +EM   G+  DI+T   LI GLC  G+  KA  L   ++K      + + ++ +I   C 
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCE 614

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           + N   A +L+  M  S C P+ + + +++ ++C+  + D A   LLE + K + P    
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTT 674

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
             ++ + L    +   A+ +   M   G++P+
Sbjct: 675 CGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 181/382 (47%), Gaps = 5/382 (1%)

Query: 176 SKLFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           SKL ++  Y ++M +S    +   ++ +   +      +NA          GF+P   + 
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  ++ L +   ++ A+  + E        ++   N ++    K G++ +A+++ K+M  
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P + TYN +++G C  G LS A    N     G  P++ TFNTLI G+CK+  + +
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  I   M +  ++P+V+TYNTL+NG  +    +     ++ ML  G   +I+TYN LI 
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCR 470
             CK+ K  +A  L K++    L P+  T   LI G C     ++A++L+ ++ +     
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +  IF ++++ FC+  +   A ++  +M     APD+     +       G  +LA   
Sbjct: 600 YSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659

Query: 531 FRKMEIRGLLPKGFDKLRTINC 552
             +   +GL+P      + +NC
Sbjct: 660 LLENISKGLVPSFTTCGKVLNC 681



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 6/352 (1%)

Query: 211 NATDTFCQMR-DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN---RISPNVYTL 266
           NA   F Q++ + GF   +E+    +  L    + +       EMR+N   ++   VY  
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYI- 80

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
             +M  + + G ++ AV VF+ M+     PSV +YN +++     G  S A K    M+ 
Sbjct: 81  -GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI P+V T    +  FC  G+   A R+ + M       N V+Y  +I+G+ +      
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L++EML+ GI  DILT+N LI  LCK+G  +++  L   + K  + PN  T++  I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C +   + A +L +S++  G  P+   +  L+  FC++     A   L +M+   + P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           +    + + +G    G  + A K+ R    +G +P  F     IN    +G+
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 148/326 (45%), Gaps = 42/326 (12%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S ++++ L K  + +     A      M ++G  P I + N  ++ L     +  A G  
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN- 310
            +       P+++T N ++  +CK   +++A+E+   M S G  P V TYNTL++G C  
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           + L ++   FK ++EK G  PN+IT+N LI  FCK  K+ EA  +F EMK   ++P++VT
Sbjct: 510 RKLDNVVDTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568

Query: 371 ------------------------------------YNTLINGYGQVGNSEMGASLYEEM 394
                                               +N +IN + +  N  M   L+ +M
Sbjct: 569 LCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
             +    D  TY  +I   CK G    A  +L++++ K  LVP+ +T   ++   CV   
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GLVPSFTTCGKVLNCLCVTHR 687

Query: 454 SERAFQLYKSMIRSGCRPNK--HIFE 477
              A  +   M+++G  P +   IFE
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFE 713



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 120/249 (48%), Gaps = 1/249 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F+ L   Y  ++    A +    M  +G  P + + N  L+ L  + ++D  +
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K M     +PN+ T N+++ +FCK   +  A+E+FK M++ G  P + T  TLI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 309 CNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C+ G L  A +    +EK      +   FN +I  FC+K  +  A ++F +M  ++ +P+
Sbjct: 577 CSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPD 636

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             TY  +I+ Y + GN ++  +   E +  G+     T   ++  LC   +  +A  ++ 
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIIN 696

Query: 428 DLDKNSLVP 436
            + +N +VP
Sbjct: 697 LMVQNGIVP 705



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 63/268 (23%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ +H I   ++T N       ++L G+  +   D     F ++L   + C  + + +++
Sbjct: 486 TMLSHGITPDVITYN-------TLLNGLCKARKLDNVVDTFKAMLE--KGCTPNIITYNI 536

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLP-IIESC-------------------------- 231
           L +++   +K   A + F +M+  G  P I+  C                          
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 232 ---------NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
                    N  +++  +   V +A   + +M  +  +P+ YT  +++ ++CK G I+ A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
                   S G +PS TT   +++  C    LS A+   NLM +NGI P           
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP----------- 705

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVT 370
                   E N IF   K    +P +V 
Sbjct: 706 -------EEVNSIFEADKKEVAAPKIVV 726


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S +  ++       +D     Y EM   RISPNV T N ++ A CK   +++A+EV
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   G +P   TYN+++ G C+ G    A+ F   M  +G++P+V+T+N+L+   CK
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  EA +IF  M    + P++ TY TL+ GY   G       L + M+RNGI  +   
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           ++ L+    K+ K ++A  +   + +  L PNA TY  +I   C     E A   ++ MI
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GK 523
             G RP+  ++  L+ + C  + +++A E+ LEML++ +   +I  + +     HC  G+
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS--HCKEGR 307

Query: 524 DELAMKLFRKMEIRGLLP 541
              ++KLF  M   G+ P
Sbjct: 308 VIESVKLFDLMVRIGVKP 325



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 133/261 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+ F K+MR + + P+V T N +M 
Sbjct: 66  AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 125

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 126 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 185

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ L+  + K+ K+ EA  +FS+M+   ++PN VTY T+I+   + G  E     +
Sbjct: 186 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 245

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G++ D + YN+LI  LC   K +KA  L  ++    +  +   ++++I   C  
Sbjct: 246 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 305

Query: 452 KNSERAFQLYKSMIRSGCRPN 472
                + +L+  M+R G +P+
Sbjct: 306 GRVIESVKLFDLMVRIGVKPD 326



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/298 (26%), Positives = 145/298 (48%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
           T+ +M D    P + + N  +++L  ++ VD A+     M ++ + P+  T N ++H FC
Sbjct: 34  TYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFC 93

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
             G  + A+   K M S G  P V TYN+L+   C  G  + A K  + M K G++P++ 
Sbjct: 94  SSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDIT 153

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ TL+ G+  KG L E + +   M    + PN   ++ L+  Y +    E    ++ +M
Sbjct: 154 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 213

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            + G+  + +TY  +I  LCK G+ + A    + +    L P++  Y++LI   C+    
Sbjct: 214 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 273

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           E+A +L+  M+  G   +   F  ++ + C+      + ++   M+   + PD I L 
Sbjct: 274 EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIITLG 331



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 115/234 (49%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+V++++T+I GF K+G L +    ++EM    +SPNVVTYN++I    +    +    +
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
              M+++G+  D +TYN+++ G C  G+ K+A   +K +  + + P+  TY++L+   C 
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                 A +++ SM + G +P+   +  L+  +           +L  M+   + P+  +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
            S L        K E AM +F KM  +GL P        I+   ++G  E   L
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAML 243



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 90/194 (46%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M   G  P I +    L        +    G    M RN I PN Y  ++++ 
Sbjct: 136 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 195

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A+ K   +E A+ VF  M   G  P+  TY T+I   C  G +  AM +   M   G++P
Sbjct: 196 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 255

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + I +N+LI   C   K  +A  +F EM    +  + + +N++I+ + + G       L+
Sbjct: 256 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLF 315

Query: 392 EEMLRNGIKVDILT 405
           + M+R G+K DI+T
Sbjct: 316 DLMVRIGVKPDIIT 329



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 73/143 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA ++K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 189 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 248

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+    N ++H+ C     E+A E+F  M   G   S   +N++I  HC +G +
Sbjct: 249 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 308

Query: 315 SLAMKFKNLMEKNGIQPNVITFN 337
             ++K  +LM + G++P++IT  
Sbjct: 309 IESVKLFDLMVRIGVKPDIITLG 331



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 52/112 (46%)

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           D     P+  +YS +I G     + ++ +  Y  M+     PN   +  +++  C+ +  
Sbjct: 4   DGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTV 63

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D+A EVL  M++  + PD +  + +  G    G+ + A+   +KM   G+ P
Sbjct: 64  DKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEP 115


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 165/313 (52%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +  L    +V  A  +   M      P+ +T N ++  +CK G+++ A E+
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATEL 337

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            K+    GF+P   TY +LI+G C +G +  A++  N  +   ++P+++ +N+L+ G C+
Sbjct: 338 LKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCR 397

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G +  A ++ +EM      P++ TYN +ING  ++GN    A +  + +  G   D+ T
Sbjct: 398 QGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFT 457

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N LI G CK  K   A  LV+ +    + P+  TY++++ G C    ++   + ++ MI
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GCRPN   + +L+  FC+    + A+ V++ M +  + PD++  + L  G    G  +
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577

Query: 526 LAMKLFRKMEIRG 538
            A  LF+K++ +G
Sbjct: 578 GAYLLFQKLDEKG 590



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 195/424 (45%), Gaps = 19/424 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           T++ ++  L K+ K + +   L  +++     D F   + + D    S  + +++ L+ D
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTY-NTIIDGYCKSGMLQEATELLKD 340

Query: 198 LLFKTYAHRK--------------KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +FK +   +                  A + F + +     P +   N  +  L     
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 400

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +  AL    EM      P+++T N++++  CK+G I  A  V  +    G++P V T+NT
Sbjct: 401 ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G+C +  L  A++    M   GI P+VIT+N+++ G CK GK  E N  F EM    
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             PN +TYN LI  + ++   E  + +   M ++G+  D +++N LI G C+ G    A 
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY 580

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L + LD+      A T++ LI     + N + A +++  MI  G +P+ + + +L+   
Sbjct: 581 LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGL 640

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+  + DRA   L EM+ K   P       + + L    +   A+ +   M   G++P+ 
Sbjct: 641 CKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700

Query: 544 FDKL 547
            D +
Sbjct: 701 VDTI 704



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 164/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L +      K + A     +M + G +P   + N  +     S  +  A    K+
Sbjct: 281 VTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD 340

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                  P+  T   +++  C  G IERA+E+F   ++    P +  YN+L+ G C +GL
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 400

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  N M + G  P++ T+N +I G CK G + +A  + ++       P+V T+NT
Sbjct: 401 ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY +    +    L E M   GI  D++TYN+++ GLCK GK K+     +++    
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PNA TY+ LI   C     E A  +   M + G  P+   F  L+  FC+N D D A 
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY 580

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  ++ EK  +  +   + L          ++A K+F +M  +G  P
Sbjct: 581 LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 160/380 (42%), Gaps = 36/380 (9%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            + YA   + R A D F +M  +   P   + N  + +L+++   D A   Y  M    +
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137

Query: 260 SPNVYTLNMVMHAFCKLG-----------IIERAVE------------------------ 284
           +P+  T  + + +FC  G           + ER  +                        
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +F  M      P V T+N ++   C KG +  +      + K G+  N  T N  I G C
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G+L EA  +   M A  V+P+VVTYNTL+ G  +    +  A     M+  G   D  
Sbjct: 258 EDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDF 316

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN +I G CK G  ++A  L+KD      VP+  TY +LI G C   + ERA +L+   
Sbjct: 317 TYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEA 376

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
                +P+  ++  L+   C+      A +V+ EM+E+   PD    + + +GL   G  
Sbjct: 377 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNI 436

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
             A  +     ++G LP  F
Sbjct: 437 SDAAVVMNDAIVKGYLPDVF 456


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 101/346 (29%), Positives = 174/346 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L+++ +       K   +A + F +M   G  P + + +  +S L +  R   A     +
Sbjct: 52  LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 111

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   +I+P+V+T + ++ AF K G +  A +++  M      PS+ TY++LI+G C    
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    M      P+V+T+NTLI GFCK  ++ E   +F EM    +  N VTYN 
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G  Q G+ +M   +++EM+ +G+  +I+TYN L+ GLCK GK +KA  + + L ++ 
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P   TY+ +I G C     E  + L+ ++   G +P+   +  ++S FC+    + A 
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  EM E    P+S   + L       G  E + +L ++M   G 
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 397



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 167/320 (52%), Gaps = 2/320 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + +    ++ L      D+A     +M + ++ P V   N ++   CK   ++ A
Sbjct: 11  GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +FK ME+ G  P+V TY++LIS  CN G  S A +  + M +  I P+V TF+ LI  
Sbjct: 71  LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 130

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           F K+GKL EA +++ EM   ++ P++VTY++LING+      +    ++E M+      D
Sbjct: 131 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 190

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TYN LI G CK  + ++   + +++ +  LV N  TY+ LI G     + + A +++K
Sbjct: 191 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 250

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC 521
            M+  G  PN   +  L+   C+N   ++A  V+ E L++  M P     + +  G+   
Sbjct: 251 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKA 309

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK E    LF  + ++G+ P
Sbjct: 310 GKVEDGWDLFCNLSLKGVKP 329



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 163/330 (49%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  L   + +D AL  +KEM    I PNV T + ++   C  G    A  +  +M  
Sbjct: 55  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P V T++ LI     +G L  A K  + M K  I P+++T+++LI GFC   +L E
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++F  M + +  P+VVTYNTLI G+ +    E G  ++ EM + G+  + +TYN LI 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GL + G    A  + K++  + + PN  TY+ L+ G C     E+A  +++ + RS   P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
             + + +++   C+    +   ++   +  K + PD +  + + SG    G  E A  LF
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354

Query: 532 RKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           ++M+  G LP        I     +G++E+
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREA 384



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 137/253 (54%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M + G  P + TY  +++G C +G   LA    N ME+  ++P V+ +NT+I G CK   
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A  +F EM+   + PNVVTY++LI+     G     + L  +M+   I  D+ T++A
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI    KEGK  +A  L  ++ K S+ P+  TYS+LI G C+    + A Q+++ M+   
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C P+   +  L+  FC+ +  +   EV  EM ++ +  +++  + L  GL   G  ++A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 529 KLFRKMEIRGLLP 541
           ++F++M   G+ P
Sbjct: 247 EIFKEMVSDGVPP 259



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 157/312 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++ +A+     M +    P + + +  + + +   ++  A   Y EM +  I P++ T +
Sbjct: 101 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 160

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ FC    ++ A ++F+ M S    P V TYNTLI G C    +   M+    M + 
Sbjct: 161 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  N +T+N LI G  + G    A  IF EM +  V PN++TYNTL++G  + G  E  
Sbjct: 221 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 280

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++E + R+ ++  I TYN +I G+CK GK +    L  +L    + P+   Y+ +I+G
Sbjct: 281 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 340

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C + + E A  L+K M   G  PN   +  L+    ++ D + +AE++ EM     A D
Sbjct: 341 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 400

Query: 508 SIILSELYSGLH 519
           +  +  + + LH
Sbjct: 401 ASTIGLVTNMLH 412



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 133/266 (50%), Gaps = 2/266 (0%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
             KL+D ++   R  D S + +  L   +    +   A   F  M      P + + N  
Sbjct: 140 AEKLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +      +RV+  +  ++EM +  +  N  T N+++    + G  + A E+FK M S G 
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P++ TYNTL+ G C  G L  AM     ++++ ++P + T+N +I G CK GK+ +   
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  +    V P+VV YNT+I+G+ + G+ E   +L++EM  +G   +   YN LI    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNAST 440
           ++G  + +A L+K++       +AST
Sbjct: 378 RDGDREASAELIKEMRSCGFAGDAST 403



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 77/153 (50%)

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           +L + M+  G + D++TY  ++ GLCK G T  A  L+  +++  L P    Y+ +I G 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C  K+ + A  L+K M   G RPN   +  L+S  C    +  A+ +L +M+E+ + PD 
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 121

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              S L       GK   A KL+ +M  R + P
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 154



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 99/221 (44%), Gaps = 35/221 (15%)

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +   M A    P++VTY  ++NG  + G++++  +L  +M +  ++  +L YN +I GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC----------------VRKNSERAF 458
           K      A  L K+++   + PN  TYS+LI+  C                 RK +   F
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 459 -------------------QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
                              +LY  M++    P+   +  L++ FC ++  D A ++   M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + K   PD +  + L  G     + E  M++FR+M  RGL+
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 223


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 177/380 (46%), Gaps = 2/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G+  +   D   ++F  +  S   C      + +L       ++   A     +M +
Sbjct: 167 LIKGLCAAGRIDDACRVFAKM--SRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + N  +  L    R D      ++M   R SP+ +T   V+H  CK G +  
Sbjct: 225 KGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGH 284

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             +V       G    V TYN LI+G+C  G +  A+    LM++N + P V TFN +I 
Sbjct: 285 GAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIH 344

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC  GK+H+A    ++M    +SPN VT+N+LI+G   VG  ++   L + M   G+  
Sbjct: 345 GFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP 404

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY   I  LC EG+ ++A  L   L    +  +   Y++L+ G C   + + AF L 
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLM 464

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M    C P+ H +  L+   C+ +  DRA ++L +M ++ + P +   + L   +   
Sbjct: 465 EKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWD 524

Query: 522 GKDELAMKLFRKMEIRGLLP 541
            K   A K++ +M   G  P
Sbjct: 525 KKHADAAKMYEQMISSGCKP 544



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 156/297 (52%), Gaps = 13/297 (4%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++       +  AL   + M+RNR++P V T N V+H FC  G + +A+     M  
Sbjct: 305 NALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAG 364

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  T+N+LISG C+ G   +A++  +LME+ G+ P+  T+   I   C +G+L E
Sbjct: 365 AGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEE 424

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A+ +FS +    +  + V Y +L++GY QVG+ +    L E+M       D+ TYN LI 
Sbjct: 425 AHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLID 484

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK  +  +A  L+  + K  + P   T++ LI      K    A ++Y+ MI SGC+P
Sbjct: 485 GLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKP 544

Query: 472 NKHIFEMLMST-----FCQNEDFDRAAEVLLEMLEKCMAPD-----SIILSELYSGL 518
           +K  + + +ST       + E+ D A   ++EM E  + PD     +II + + +GL
Sbjct: 545 DKQTYTLKISTDWFEGATKEENIDMA---VVEMHEAGVFPDVETYNAIIKAYVDAGL 598



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 150/323 (46%), Gaps = 1/323 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKL 276
           +MR+ G  P   + N  +  L  +  +  A G + +M RR     + Y+  +++   C  
Sbjct: 115 RMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAA 174

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G I+ A  VF  M      P V TY  L+ G C    +  A      M   G+ PNV+T+
Sbjct: 175 GRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTY 234

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G C++G+  +  ++  +M+    SP+  TY  +++G  + G    GA +  E + 
Sbjct: 235 NALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIG 294

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+ +++LTYNALI G CK G  K A  +++ + +N + P   T++ +I G C      +
Sbjct: 295 KGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHK 354

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A      M  +G  PN   F  L+S  C   +   A  +L  M E  + PD    +    
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 517 GLHHCGKDELAMKLFRKMEIRGL 539
            L   G+ E A  LF  + ++G+
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGI 437



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 156/347 (44%), Gaps = 2/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L K      +  +A   F +M      P + +    L  L    RV  A     EM 
Sbjct: 164 YTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PNV T N ++   C+ G  +   ++ + ME     P   TY  ++ G C  G + 
Sbjct: 224 NKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              K  +     G+   V+T+N LI G+CK G +  A  +   MK   V+P V T+N +I
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+   G      +   +M   G+  + +T+N+LI G C  G+ K A  L+  +++  ++
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+  I   C     E A  L+  +   G + +  I+  L+  +CQ  D D A  +
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463

Query: 496 LLEML-EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +M  E CM PD    + L  GL    + + A+ L  KM+ +G+ P
Sbjct: 464 MEKMASENCM-PDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEP 509



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 135/289 (46%), Gaps = 1/289 (0%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKG 312
           MR   ++P+ +T N +M   C+ G++  A  +F  M    G      +Y  LI G C  G
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAG 175

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A +    M +   +P V T+  L+ G CK  ++ EA  +  EM    V PNVVTYN
Sbjct: 176 RIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYN 235

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI G  Q G  +    L E+M       D  TY  ++ GLCK GK    A ++ +    
Sbjct: 236 ALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGK 295

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            +     TY+ALI G C   + + A  + + M R+   P    F  ++  FC      +A
Sbjct: 296 GVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKA 355

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              L +M    ++P+++  + L SG    G+ ++A++L   ME  G+LP
Sbjct: 356 MAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP 404



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/405 (21%), Positives = 148/405 (36%), Gaps = 86/405 (21%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M +YG LP  ++   F+ +L D  +++ A   +  +    I  +      ++H +C++G 
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I+ A  + + M S   +P V TYNTLI G C    L  A+   + M+K GI+P   TFN 
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516

Query: 339 LIFGFCKKGKLHEANRIFS-------------------------------------EMKA 361
           LI       K  +A +++                                      EM  
Sbjct: 517 LIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE 576

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMG---------------------------------- 387
             V P+V TYN +I  Y   G  E                                    
Sbjct: 577 AGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDA 636

Query: 388 ---------------ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
                            L+E+M  +     I TY AL+ GLC + + ++  +L+  +  N
Sbjct: 637 FDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGN 696

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           S++ +      L+   C  +    A + ++SM     +P      +L+S  C + D   A
Sbjct: 697 SILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMA 756

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
             +  +ML      D ++   L   LH  G     +++   M+ +
Sbjct: 757 VSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAK 801



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 105/237 (44%), Gaps = 5/237 (2%)

Query: 332 NVITFNTLIFGFCKKG----KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           +V + N  +  +  +G    +L      F  M  +   PN  TYNTLIN + ++      
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALIT 446
            +    M   G+  D  TYN L+LGLC+ G    A  L   + +      +  +Y+ LI 
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     + A +++  M R  CRP  H + +L+   C+      A  +L EM+ K + P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           + +  + L  GL   G+ +   KL  KMEI+   P  +   + ++   ++G+   G 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGA 286



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 70/166 (42%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           RN  + F QM +    P I +    L  L +  R++       +M+ N I  +    + +
Sbjct: 649 RNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYL 708

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  +C L +   A E F++M    F P + +   L+SG C+ G   +A+   + M   G 
Sbjct: 709 LGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGY 768

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             + + +  LI    +KG       + S M A     +  TY +L+
Sbjct: 769 NYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 48/109 (44%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           D L   Y + + +R A + F  M    F P ++SC   LS L DS    +A+  + +M  
Sbjct: 706 DYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLG 765

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
              + +     +++    + G     +E+   M++   + S  TY +L+
Sbjct: 766 LGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 161/318 (50%), Gaps = 1/318 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D     F++L        +   A      M   G  P I + N  +      E V  A  
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M +  + P+V   N+++  +CK  +++ A+ +FK + +   +P++ +YN+LI G C
Sbjct: 322 LFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLC 381

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N G +S   K  + M  +   P+V+T+N LI   CK+G++ EA  +   M    V PN+V
Sbjct: 382 NSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIV 441

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN +++GY    N  +   ++  M+++G++ DIL YN LI G CK     +A  L K++
Sbjct: 442 TYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
              +L+P+ ++Y++LI G C         +L   M  SG  P+   + +L+  FC+ + F
Sbjct: 502 RHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPF 561

Query: 490 DRAAEVLLEMLEKCMAPD 507
           D+A  +  +++E  + PD
Sbjct: 562 DKAISLFRQIVEG-IWPD 578



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 163/324 (50%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           Q+ + G L    + N  +       R         +M R  + P+ YT N+++ A CK G
Sbjct: 220 QIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEG 279

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I  A  V   M   G  P + TYN L+ G+C++  +  A +  N M K G++P+V+ +N
Sbjct: 280 RILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYN 339

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G+CK   + EA  +F E+   N+ P + +YN+LI+G    G       L +EM  +
Sbjct: 340 VLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGS 399

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D++TYN LI  LCKEG+  +A  ++  + K  + PN  TY+A++ G C+R N   A
Sbjct: 400 AQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             ++  M++SG  P+   + +L++ +C+ E  D A  +  EM  K + PD    + L  G
Sbjct: 460 KDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDG 519

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L + G+     +L  +M   G  P
Sbjct: 520 LCNLGRIPHVQELLDEMCDSGQSP 543



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 168/340 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VFD L         +  A   F Q++  G  P I +    ++          A      +
Sbjct: 57  VFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATI 116

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            ++   PN+ T N +++ FC  G+I +A++  +N+ + G++    TY TLI+G    G +
Sbjct: 117 LKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQI 176

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+     MEK+ +QPN++ ++ LI G CK G + +A  + S++    +  + VTYN+L
Sbjct: 177 KAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSL 236

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G   VG  +    L  +M+R  +  D  T+N LI  LCKEG+  +A  ++  + K   
Sbjct: 237 IDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGE 296

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+AL+ G C R+N   A +L+  M++ G  P+   + +L+  +C+ +  D A  
Sbjct: 297 KPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMV 356

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +  E+  K + P     + L  GL + G+     KL  +M
Sbjct: 357 LFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM 396



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 211/449 (46%), Gaps = 15/449 (3%)

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           W+++T L T +    V         DY  ++      +  +     LE   ++  +  + 
Sbjct: 246 WQEVTQLLTKMVRENVD------PDDYTFNILIDALCKEGR----ILEAQGVLAMMSKRG 295

Query: 154 RK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
            K    +  +++ G    ++     +LF+ ++   R  +   L +++L   Y   K    
Sbjct: 296 EKPDIVTYNALMEGYCSRENVHEARELFNRMVK--RGLEPDVLNYNVLIDGYCKTKMVDE 353

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F ++ +   +P I S N  +  L +S R+        EM  +   P+V T N+++ 
Sbjct: 354 AMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A CK G I  A+ V   M   G  P++ TYN ++ G+C +  +++A    N M K+G++P
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++ +N LI G+CK   + EA  +F EM+  N+ P++ +YN+LI+G   +G       L 
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM  +G   D++TYN L+   CK     KA  L + + +  + P+  T  A++   C  
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKG 592

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           +  + A    K ++  GC PN   + +L++  C++  F  A  +L +M +    PD+I  
Sbjct: 593 EKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITF 652

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +   L    + + A KL  +M  RGL+
Sbjct: 653 EIIIGVLLQRNETDKAEKLREEMIARGLV 681



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 155/327 (47%), Gaps = 1/327 (0%)

Query: 216 FCQ-MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
           FCQ +   G+L    +    ++ L  + ++  AL   +EM ++ + PN+   + ++   C
Sbjct: 147 FCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K G +  A+ +   +   G +    TYN+LI G C+ G      +    M +  + P+  
Sbjct: 207 KDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDY 266

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN LI   CK+G++ EA  + + M      P++VTYN L+ GY    N      L+  M
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ G++ D+L YN LI G CK     +A  L K+L   +LVP  ++Y++LI G C     
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
               +L   M  S   P+   + +L+   C+      A  VL+ M++K + P+ +  + +
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G        +A  +F +M   GL P
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEP 473



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/300 (29%), Positives = 151/300 (50%), Gaps = 4/300 (1%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD A+  +  M R    P     + ++ A  ++G    A+ +F  ++S G  PS+ T+  
Sbjct: 36  VDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTI 95

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+ + ++   + A      + K+G QPN++TFNT+I GFC  G + +A      + A  
Sbjct: 96  LINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQG 155

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              +  TY TLING  + G  +    L +EM ++ ++ +++ Y+ALI GLCK+G    A 
Sbjct: 156 YLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDAL 215

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L   + +  ++ +A TY++LI G C     +   QL   M+R    P+ + F +L+   
Sbjct: 216 GLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDAL 275

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           C+      A  VL  M ++   PD +  + L  G  +C ++ +  A +LF +M  RGL P
Sbjct: 276 CKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG--YCSRENVHEARELFNRMVKRGLEP 333



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 3/335 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +++  T    +M      P   + N  + +L    R+  A G    M +    P++ T N
Sbjct: 245 RWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYN 304

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEK 326
            +M  +C    +  A E+F  M   G  P V  YN LI G+C   ++  AM  FK L  K
Sbjct: 305 ALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           N + P + ++N+LI G C  G++    ++  EM  +   P+VVTYN LI+   + G    
Sbjct: 365 N-LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE 423

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              +   M++ G+K +I+TYNA++ G C       A  +   + K+ L P+   Y+ LI 
Sbjct: 424 ALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLIN 483

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C  +  + A  L+K M      P+   +  L+   C         E+L EM +   +P
Sbjct: 484 GYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSP 543

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D I  + L          + A+ LFR++ + G+ P
Sbjct: 544 DVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWP 577


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 190/384 (49%), Gaps = 2/384 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +  F    +LFD ++   R C      +  +        +   A     +M 
Sbjct: 166 TLINGLCKAGEFAQALELFDDMVA--RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMG 223

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + + +  + SL     V+ AL  +  M+   ISP V +   ++   C     +
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWK 283

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M S+  +P + T++ LI   C +G +  A      M + G++PNVIT+N+L+
Sbjct: 284 EASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLM 343

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+  + ++ EA ++F  M      P+V +Y+ LINGY  V   +    L+ EM+  G+ 
Sbjct: 344 HGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLT 403

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + ++Y  LI   C+ GK ++A  L KD+  N  +P+  TYS L+ G C +    +AF+L
Sbjct: 404 PNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRL 463

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +++M  +  +PN  ++ +L+ + C++ + + A ++  E+    + PD  I + + +GL  
Sbjct: 464 FRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCK 523

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF 544
            G  + A++ FRKME  G  P  F
Sbjct: 524 EGLLDEALEAFRKMEEDGCPPNEF 547



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 177/347 (51%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           F+ L       +++ +A  +   QM   G  P   + N  ++     + VD+      ++
Sbjct: 93  FNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKV 152

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  + P + T   +++  CK G   +A+E+F +M + G  P V TY T+I+G C  G  
Sbjct: 153 IKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGET 212

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A      M + G QP+V+T++TLI   CK   ++EA  IFS MKA  +SP VV+Y +L
Sbjct: 213 AAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSL 272

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G       +  +++  EM    I  DI+T++ LI   CKEG   +A  ++K + +  +
Sbjct: 273 IQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGV 332

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY++L+ G  ++     A +L+  MI  GC+P+   + +L++ +C  +  D A +
Sbjct: 333 EPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQ 392

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  EM+ + + P+++  + L       GK   A +LF+ M   G LP
Sbjct: 393 LFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLP 439



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/352 (27%), Positives = 167/352 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  L  +    +    A D F  M+  G  P + S    +  L    R   A 
Sbjct: 227 CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEAS 286

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    I P++ T ++++  FCK G +  A  V K M  MG  P+V TYN+L+ G+
Sbjct: 287 AMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGY 346

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +  +  A K  ++M   G +P+V +++ LI G+C   ++ EA ++F+EM    ++PN 
Sbjct: 347 SLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+Y TLI+ + Q+G       L+++M  NG   D+ TY+ L+ G CK+G   KA  L + 
Sbjct: 407 VSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRA 466

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L PN   Y+ LI   C   N   A +L+  +   G +P+  I+  +++  C+   
Sbjct: 467 MQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGL 526

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            D A E   +M E    P+    + +  G      +  A++L  +M  +G +
Sbjct: 527 LDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFV 578



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 154/319 (48%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P I +    ++ L  +     AL  + +M      P+VYT   +++  CK+G    A
Sbjct: 156 GLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAA 215

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             + K M  +G  P V TY+TLI   C   L++ A+   + M+  GI P V+++ +LI G
Sbjct: 216 AGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQG 275

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C   +  EA+ + +EM + N+ P++VT++ LI+ + + GN      + + M   G++ +
Sbjct: 276 LCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPN 335

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TYN+L+ G   + +  +A  L   +      P+  +YS LI G C+ K  + A QL+ 
Sbjct: 336 VITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFN 395

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI  G  PN   +  L+  FCQ      A E+  +M      PD    S L  G    G
Sbjct: 396 EMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A +LFR M+   L P
Sbjct: 456 YLGKAFRLFRAMQGTYLKP 474



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 145/300 (48%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +++ A+    +M     +P I + +  +        V  A G  K M    + PNV T N
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +MH +     +  A ++F  M + G  P V +Y+ LI+G+C    +  A +  N M   
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+ PN +++ TLI  FC+ GKL EA  +F +M      P++ TY+ L+ G+ + G     
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L+  M    +K +++ Y  LI  +CK G    A  L  +L  + L P+   Y+ +I G
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A + ++ M   GC PN+  + +++  F Q++D  RA +++ EM +K    D
Sbjct: 521 LCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 124/247 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y+ + +   A   F  M   G  P + S +  ++     +R+D A   + E
Sbjct: 337 ITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNE 396

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++PN  +   ++HAFC+LG +  A E+FK+M + G++P + TY+ L+ G C +G 
Sbjct: 397 MIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGY 456

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    M+   ++PN++ +  LI   CK G L+ A ++FSE+    + P+V  Y T
Sbjct: 457 LGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTT 516

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  + G  +     + +M  +G   +  +YN +I G  +     +A  L+ ++    
Sbjct: 517 IINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576

Query: 434 LVPNAST 440
            V +  T
Sbjct: 577 FVADEGT 583



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 104/226 (46%), Gaps = 2/226 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLFD ++   R C      + +L   Y   K+   A   F +M   G  P   S    + 
Sbjct: 357 KLFDVMIT--RGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIH 414

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +     ++  A   +K+M  N   P++ T ++++  FCK G + +A  +F+ M+     P
Sbjct: 415 AFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKP 474

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  Y  LI   C  G L+ A K  + +  +G+QP+V  + T+I G CK+G L EA   F
Sbjct: 475 NLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAF 534

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            +M+     PN  +YN +I G+ Q  +      L  EM   G   D
Sbjct: 535 RKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score = 46.6 bits (109), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%)

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +R+  +    L K M  +G  PN     +L++ FC  +  D    VL ++++  + P  I
Sbjct: 103 MRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTII 162

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             + L +GL   G+   A++LF  M  RG  P  +     IN   + GE  +  
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAA 216


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 175/359 (48%), Gaps = 41/359 (11%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT----------------- 265
           GF   I S NK+L+ L+ S     A+  ++     R  PN +T                 
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165

Query: 266 -----------------LNMVMHAFCKLGIIERAVEVFKN-MESMGFIPSVTTYNTLISG 307
                             N+V+ + C+ G   RA+E+F+  M   G  P++ TYNT+I+G
Sbjct: 166 TLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIING 225

Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C    L   M+ F+ L+E+ G  P+V+T+NTLI   CK G L EA R+  +M + +  P
Sbjct: 226 LCKSNELGAGMELFEELVER-GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVP 284

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGKTKKAAY 424
           NVVTY+ LING  +VG  +    L +EM R    V  +I+TYN+ + GLCK+  T +A  
Sbjct: 285 NVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACE 344

Query: 425 LVKDLDKNSL--VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           L++ L   SL   P+  T+S LI G C     + A  ++  MI  G  PN   +  L++ 
Sbjct: 345 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 404

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C+ +  +RA  ++  M++K + PD I  S L        + + A++L   M  RG  P
Sbjct: 405 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP 463



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 190/424 (44%), Gaps = 47/424 (11%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   + +F+  S LF+ ++      D   + F  L        +   A D    M +
Sbjct: 573 LIAGACKAGNFEQASALFEEMVAKNLQPDV--MTFGALIDGLCKAGQVEAARDILDLMGN 630

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  +  L  S R++ A  F +EM  +   P+  T   +++A C+    + 
Sbjct: 631 LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++   ++S G+ P   TYN L+ G    G    A+     M   G  P+V+T+NTLI 
Sbjct: 691 ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750

Query: 342 GFCKKGKLHEANRIFSEMKATNVS----PNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             CK G L EA R+  +M ++ VS    PNVVTY+ LING  +VG  +    L +EM+R 
Sbjct: 751 SLCKAGDLEEARRLHGDM-SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809

Query: 398 GIKV--DILTYNA-------------------------------------LILGLCKEGK 418
              V  +I+TYN+                                     LI GLCK G+
Sbjct: 810 SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
           T +A  +  D+     VPN  TY+ L+ G C     ERA  + +SM+  G  P+   + +
Sbjct: 870 TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR- 537
           L+  FC+    D A E+L  M  +   P+ +  + +  GL    +   A ++F  M ++ 
Sbjct: 930 LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH 989

Query: 538 GLLP 541
           GL P
Sbjct: 990 GLAP 993



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 183/380 (48%), Gaps = 32/380 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A   F  M   G++P + + N  ++ L  +++++ A    + 
Sbjct: 361 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 420

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+V T ++++ AFCK   ++ A+E+   M S G  P+V T+N++I G C    
Sbjct: 421 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 480

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM------------- 359
              A + F ++  K+G+ P+ IT+ TLI G  + G+  +A  +   M             
Sbjct: 481 SGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCIN 540

Query: 360 ---KATNVS---------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
              K  +VS               P+ VT+N LI G  + GN E  ++L+EEM+   ++ 
Sbjct: 541 GLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++T+ ALI GLCK G+ + A  ++  +    + PN  TY+AL+ G C     E A Q  
Sbjct: 601 DVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFL 660

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+ SGC P+   +  L+   C+    D A +++ E+      PD++  + L  GL   
Sbjct: 661 EEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKS 720

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ E A+ +  +M  +G  P
Sbjct: 721 GQTEQAITVLEEMVGKGHHP 740



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 186/410 (45%), Gaps = 39/410 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +D  +    + +S++      D   + + +L   +    +   A +    M 
Sbjct: 400 ALVNGLCKADKMERAHAMIESMVDKGVTPDV--ITYSVLVDAFCKASRVDEALELLHGMA 457

Query: 221 DYGFLPIIESCNKFLSSLLDSERV--------DIAL----------------GFYKEMRR 256
             G  P + + N  +  L  S+R         D+AL                G ++  R 
Sbjct: 458 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRA 517

Query: 257 NRI--------SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            +          P+ Y  N  ++   KLG + RA++V+  M  +  +P   T+N LI+G 
Sbjct: 518 GQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGA 577

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G    A   F+ ++ KN +QP+V+TF  LI G CK G++  A  I   M    V PN
Sbjct: 578 CKAGNFEQASALFEEMVAKN-LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 636

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYN L++G  + G  E      EEM+ +G   D +TY +L+  LC+  +T  A  LV 
Sbjct: 637 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +L      P+  TY+ L+ G      +E+A  + + M+  G  P+   +  L+ + C+  
Sbjct: 697 ELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAG 756

Query: 488 DFDRAAEVLLEM---LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           D + A  +  +M   + +C  P+ +  S L +GL   G+ + A +L ++M
Sbjct: 757 DLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEM 806



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 212/476 (44%), Gaps = 58/476 (12%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           H T   +     K   D   +L FF  +++   SS ++  ++IVL  L +  +   +  I
Sbjct: 146 HFTYSTLLRATYKAGGDVERTLGFFRRIRS---SSRSVADYNIVLQSLCRAGETARALEI 202

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL-LFKTYAHRKKFRNATDTFCQMRD 221
            RG +  D        +++I+    +C S+ L   + LF+    R               
Sbjct: 203 FRGEMARDGVAPTIVTYNTIING--LCKSNELGAGMELFEELVER--------------- 245

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  + SL  +  ++ A   + +M      PNV T +++++  CK+G I+ 
Sbjct: 246 -GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDE 304

Query: 282 AVEVFKNM--ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFN 337
           A E+ + M  +S   +P++ TYN+ + G C + + + A +    +      + P+ +TF+
Sbjct: 305 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 364

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G CK G++ EA  +F +M A    PNV+TYN L+NG  +    E   ++ E M+  
Sbjct: 365 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 424

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  D++TY+ L+   CK  +  +A  L+  +      PN  T++++I G C    S  A
Sbjct: 425 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 484

Query: 458 FQLYKSM-IRSGCRPNK-------------------------------HIFEMLMSTFCQ 485
           FQ++  M ++ G  P+K                               + F   ++   +
Sbjct: 485 FQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSK 544

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D  RA +V   MLE  + PD +  + L +G    G  E A  LF +M  + L P
Sbjct: 545 LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQP 600



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 184/412 (44%), Gaps = 40/412 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D    +FD ++    +   + + ++ L        K   A      M 
Sbjct: 365 TLIDGLCKCGQIDEACSVFDDMIAGGYV--PNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + + +  + +   + RVD AL     M     +PNV T N ++   CK    +
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK---SD 479

Query: 281 RAVEVFKNMESM----GFIPSVTTYNTLISG--------------------------HCN 310
           R+ E F+  + M    G +P   TY TLI G                           C 
Sbjct: 480 RSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCI 539

Query: 311 KGL-----LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            GL     +S A++  N M +  + P+ +TFN LI G CK G   +A+ +F EM A N+ 
Sbjct: 540 NGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 599

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V+T+  LI+G  + G  E    + + M   G+  +++TYNAL+ GLCK G+ ++A   
Sbjct: 600 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 659

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++++  +  VP++ TY +L+   C    ++ A QL   +   G  P+   + +L+    +
Sbjct: 660 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 719

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           +   ++A  VL EM+ K   PD +  + L   L   G  E A +L   M  R
Sbjct: 720 SGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSR 771



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 181/390 (46%), Gaps = 40/390 (10%)

Query: 190  DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            D   + +++L        +   A     +M   G  P + + N  + SL  +  ++ A  
Sbjct: 704  DPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARR 763

Query: 250  FYKEMRRNRIS----PNVYTLNMVMHAFCKLGIIERAVEVFKNM--ESMGFIPSVTTYNT 303
             + +M  +R+S    PNV T +++++  CK+G I+ A E+ + M  +S   +P++ TYN+
Sbjct: 764  LHGDMS-SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822

Query: 304  LISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             + G C + +++ A +    +      + P+ +TF+TLI G CK G+  EA  +F +M A
Sbjct: 823  FLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIA 882

Query: 362  TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
                PNVVTYN L+NG  +    E   ++ E M+  G+  D++TY+ L+   CK     +
Sbjct: 883  GGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDE 942

Query: 422  AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSGCRPNKHIFEMLM 480
            A  L+  +      PN  T++++I G C    S  AFQ++  M ++ G  P+K  +  L+
Sbjct: 943  ALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLI 1002

Query: 481  STFCQNEDFDRAAEVLLE-----------------------------MLEKCMAPDSIIL 511
                +   +   AEVLL+                             MLE  + PD +  
Sbjct: 1003 DGLFRT-GWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTF 1061

Query: 512  SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + L +G    G  E A  LF +M  + L P
Sbjct: 1062 NILIAGACKAGNFEQASALFEEMVAKNLQP 1091



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 12/344 (3%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSERV 244
            R C  + + + +L        +   A +   +M  +    LP I + N FL  L     +
Sbjct: 774  RCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMM 833

Query: 245  DIALGFYKEMRRN--RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
              A    + +R    R+SP+  T + ++   CK G  + A  VF +M + G++P+V TYN
Sbjct: 834  AEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYN 893

Query: 303  TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
             L++G C    +  A      M   G+ P+VIT++ L+  FCK   + EA  +   M + 
Sbjct: 894  VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953

Query: 363  NVSPNVVTYNTLINGYGQVGNSEMGASLYEEM-LRNGIKVDILTYNALILGLCKEGKTKK 421
              +PNVVT+N++I+G  +   S     ++++M L++G+  D +TY  LI GL + G   +
Sbjct: 954  GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ 1013

Query: 422  AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
            A  L+  +      P+   ++  I G     +  RA      M+     P+K  F +L++
Sbjct: 1014 AEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALH---RMLELELVPDKVTFNILIA 1066

Query: 482  TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
              C+  +F++A+ +  EM+ K + PD +    L  GL   G+ E
Sbjct: 1067 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 10/261 (3%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +++ G+      D    +FD ++    +   + + +++L        K   A      M 
Sbjct: 859  TLIDGLCKCGQTDEACNVFDDMIAGGYV--PNVVTYNVLMNGLCKTDKMERAHAMIESMV 916

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            D G  P + + +  + +   +  VD AL     M     +PNV T N ++   CK     
Sbjct: 917  DKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSG 976

Query: 281  RAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A ++F +M    G  P   TY TLI G    G    A    + M      P+   FN  
Sbjct: 977  EAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCC 1032

Query: 340  IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
            I G     KL + +R    M    + P+ VT+N LI G  + GN E  ++L+EEM+   +
Sbjct: 1033 INGL---SKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 1089

Query: 400  KVDILTYNALILGLCKEGKTK 420
            + D++T+ ALI GLCK G+ +
Sbjct: 1090 QPDVMTFGALIDGLCKAGQVE 1110


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 22/368 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + K +  A     +M   G  P     N F+ S+   E++    
Sbjct: 173 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 232

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D+A   Y EM       N   +       C +G  ++A ++ K M   GF+P  +TY+
Sbjct: 233 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 292

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C+   +  A      M+  G+ P+V T+  LI  FCK G + +A  +F EM++ 
Sbjct: 293 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 352

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP VVTY  LI+ Y +         ++  M+  G + + +TY AL+ GLCK G   KA
Sbjct: 353 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 412

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                D+++L PN  TY AL+ G C     + A +L  +M+ 
Sbjct: 413 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 472

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN  +++ L+  FC+    D A EV L+M +    P     + L   +   G+ +L
Sbjct: 473 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 532

Query: 527 AMKLFRKM 534
           AMK+  +M
Sbjct: 533 AMKVLSQM 540



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 14/412 (3%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S T+ T++ ++H   K ++   +  I   ++D+     P+ +    L    +C +  +  
Sbjct: 355 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC--RPNDVTYGALVD-GLCKAGNI-- 409

Query: 197 DLLFKTYAHRKKFRNATDTF----CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              F+ YA      ++ D+     C+ R +   P + +    +  L  + +VD A     
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDR-HTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            M  +   PN    + ++  FCK G I+ A EVF  M   G++PSV TY +LI      G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L LAMK  + M K+   PNV+T+  +I G C+ G+  +A ++ S M+    SPNVVTY 
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+G G+ G  ++   L+ +M R G   + +TY  LI  LC  G   KA  L+ ++ + 
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
                   Y   I G    K+   +  + + M   G  P   ++ ML+  F +    + A
Sbjct: 649 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 493 AEVLLEMLE--KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            E+  EM+E    +  D+ + + L   L    + E A +L+ +M  RG +P+
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPE 758



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 6/337 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D   +L D++L S   C+ + +V+D L   +    K  +A + F QM 
Sbjct: 449 ALVDGLCKAHKVDHAHELLDAMLSS--GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 506

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+LP + +    +  +    R+D+A+    +M ++  +PNV T   ++   C++G  E
Sbjct: 507 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 566

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+++   ME  G  P+V TY  LI G    G + L++     M + G  PN +T+  LI
Sbjct: 567 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 626

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C  G L +A  +  EMK T     +  Y   I G+ +   + +G  + EEM   G  
Sbjct: 627 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTV 684

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDK--NSLVPNASTYSALITGQCVRKNSERAF 458
                Y  LI    K G+ + A  L K++ +  +S+  +   Y++LI   C+    E AF
Sbjct: 685 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 744

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +LY  M R G  P   +F  L+    + + +D A ++
Sbjct: 745 RLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 12/313 (3%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK---LGIIERAVEVFK 287
           C   +S L+++   D A+ F   MR N   PNV T   ++  F K   LG  +R + +  
Sbjct: 110 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINM-- 167

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M + G  P+ + +N+L+  +CN+   + A K  N M   G  P  + +N  I   C + 
Sbjct: 168 -MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 226

Query: 348 KLHE------ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           KL        A +I+ EM A N   N V           VG  +    L +EM+R G   
Sbjct: 227 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 286

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY+ +I  LC   K +KA  L +++    + P+  TY+ LI   C     E+A  L+
Sbjct: 287 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC P    +  L+  + + +   +A ++   M++    P+ +    L  GL   
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 522 GKDELAMKLFRKM 534
           G    A +++ K+
Sbjct: 407 GNISKAFEVYAKL 419



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 151/371 (40%), Gaps = 44/371 (11%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D+   ++D+G+ P   + N  +  L  + +VD+     KEM  +    + +T+    H
Sbjct: 24  AGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAH 83

Query: 272 AFCKLG-------IIER-------------------------AVEVFKNMESMGFIPSVT 299
           A CK G       +IER                         A+     M     IP+V 
Sbjct: 84  ALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVV 143

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY TL+SG   K  L    +  N+M   G  PN   FN+L+  +C +     A ++ + M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSE---------MGASLYEEMLRNGIKVDILTYNALI 410
                 P  V YN  I   G +   E         +   +Y EML     ++ +      
Sbjct: 204 TTCGCPPGYVVYNIFI---GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 260

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             LC  GK  KA  L+K++ +   VP+ STYS +IT  C     E+AF L++ M   G  
Sbjct: 261 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 320

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+ + + +L+ +FC+    ++A  +  EM     +P  +  + L        +   A  +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 380

Query: 531 FRKMEIRGLLP 541
           F +M   G  P
Sbjct: 381 FHRMVDAGCRP 391



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 85/209 (40%), Gaps = 34/209 (16%)

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
           H A      +K     P+ VTYN L+      G  ++G  + +EM  +G  +D  T    
Sbjct: 22  HAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCF 81

Query: 410 ILGLCKEGKTKKAAYLVKDLD--------------------------------KNSLVPN 437
              LCKEG+   A  +++  D                                 NS +PN
Sbjct: 82  AHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPN 141

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY  L++G   +K      ++   M+  GC PN  +F  L+ ++C  +D+  A + LL
Sbjct: 142 VVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK-LL 200

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL 526
             +  C  P   ++  ++ G   CG+++L
Sbjct: 201 NRMTTCGCPPGYVVYNIFIG-SICGQEKL 228


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 213/453 (47%), Gaps = 27/453 (5%)

Query: 108 RVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL 167
           RV  +   ++ +  L+  FFT ++        ++T++ ++ +L + R  +  +S+L  I+
Sbjct: 65  RVVEIFYNLKNEPNLAWSFFTQLKESGFQH-NVDTYAALIRVLCRWRLERKLQSLLSEIV 123

Query: 168 DSD----SFDLPSKLFDSILYSYRMCDSSP-----LVFDLLFKTYAHRKKFRNATDTFCQ 218
            S      FD+ + LFD +       +        LV D+L K Y     F  A D   Q
Sbjct: 124 GSKESVLGFDITA-LFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQ 182

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
            +  GF+P I SCN  ++ L++  ++D+A+  Y+ ++R  ++PN YT  + + A C+ G 
Sbjct: 183 TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGN 242

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            E AV+VF+ ME  G  P+  T +T I G C+     L  +    +       +   +  
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTA 302

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I GFC + KL EA  +F +M    ++P+   Y  LI+ Y + GN     +L+ +M+ NG
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362

Query: 399 IK----------------VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           IK                +D + YN ++  LCK GK ++A  L+ ++    +  +   Y+
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYT 422

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI G C++     A  +++ M   G  P+   + +L+  F +N     A E+L  +  +
Sbjct: 423 TLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQ 482

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            + P+S   + +  GL   GK + A      +E
Sbjct: 483 GLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 515



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 176/405 (43%), Gaps = 63/405 (15%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL------- 248
           + +  K    +  F  A D F +M + G  P   +C+ ++  L   +R D+         
Sbjct: 230 YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR 289

Query: 249 ----------------GFYKEMRRNR------------ISPNVYTLNMVMHAFCKLGIIE 280
                           GF  EM+               I+P+ Y    ++HA+CK G + 
Sbjct: 290 AANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 281 RAVEV----------------FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           +AV +                FK     G       YN ++   C  G +  A++  N M
Sbjct: 350 QAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEM 409

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +   +  +V+ + TLI G+C +GKL +A  +F EMK   + P++VTYN L+ G+ + G  
Sbjct: 410 KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLK 469

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    L + +   G+K +  T+N +I GLC  GK K+A   +  L+   L      YSA+
Sbjct: 470 KEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCL----ENYSAM 525

Query: 445 ITGQCVRKNSERAFQLYKSMIRSG--------CRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           + G C    + +A++L+  + + G          PN+ ++  L+  FC++ D  RA  V 
Sbjct: 526 VDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVF 585

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++E+ + PD I  + + +G         A  +F  M+ RG+ P
Sbjct: 586 DMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKP 630



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 16/295 (5%)

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           +  L+M++ A+ ++G+ + A++     +  GF+P + + N L++     G + +A+    
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            +++ G+ PN  T+   I   C+KG   EA  +F EM+   V+PN VT +T I G     
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
            S++G      +      +D   Y A+I G C E K K+A  +  D+    + P+   Y 
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPN----------------KHIFEMLMSTFCQN 486
           ALI   C   N  +A  L+  M+ +G + N                + ++ +++   C+ 
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + A E+L EM  + M+ D +  + L +G    GK   A  +F +M+ RG+ P
Sbjct: 397 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEP 451



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 141/315 (44%), Gaps = 12/315 (3%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           N  D F + RD G        N  + +L    +V+ A+    EM+  R+S +V     ++
Sbjct: 366 NLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLI 425

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             +C  G +  A  +F+ M+  G  P + TYN L+ G    GL   A++  + +   G++
Sbjct: 426 AGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLK 485

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN  T N +I G C  GK+ EA    + ++   +      Y+ +++GY +   +     L
Sbjct: 486 PNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYEL 541

Query: 391 YEEMLRNGI----KVDI----LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +  + + GI     +D+    + Y  LI   C++G  K+A  +   L +  + P+  TY+
Sbjct: 542 FSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYT 601

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +I G C       A  ++  M   G +P+   + +++    +  +   A  +  EM+ +
Sbjct: 602 MMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIAR 661

Query: 503 CMAPDSIILSELYSG 517
            + PD +  + L  G
Sbjct: 662 GLQPDIVTYTALLPG 676



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 114/250 (45%), Gaps = 40/250 (16%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           L  + VD A   ++EM+   I P++ T N+++  F + G+ + A+E+   + + G  P+ 
Sbjct: 430 LQGKLVD-AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 488

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLME-------------------------------KN 327
            T+N +I G C  G +  A  F N +E                               K 
Sbjct: 489 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQ 548

Query: 328 GI--------QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           GI        +PN I +  LI  FC+ G +  A  +F  +    ++P+V+TY  +INGY 
Sbjct: 549 GILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC 608

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +V        ++ +M   GIK D++TY  ++ G  K    + A  L  ++    L P+  
Sbjct: 609 RVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIV 668

Query: 440 TYSALITGQC 449
           TY+AL+ G+C
Sbjct: 669 TYTALLPGKC 678



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 8/157 (5%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFI--------PSVTTYNTLISGHCNKGLLSLAMKF 320
           ++  +CK     +A E+F  +   G +        P+   Y  LI   C  G +  A   
Sbjct: 525 MVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLV 584

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            +++ + GI P+VIT+  +I G+C+   L EA  IF++MK   + P+V+TY  +++G+ +
Sbjct: 585 FDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSK 644

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
             N +   +LY+EM+  G++ DI+TY AL+ G C  G
Sbjct: 645 TNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFG 681



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/135 (32%), Positives = 69/135 (51%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN      ++ AFC+ G ++RA  VF  +   G  P V TY  +I+G+C    L  A 
Sbjct: 558 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 617

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              N M++ GI+P+VIT+  ++ G  K   L +A  ++ EM A  + P++VTY  L+ G 
Sbjct: 618 DIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGK 677

Query: 379 GQVGNSEMGASLYEE 393
              G+        EE
Sbjct: 678 CNFGSRHFDNQWLEE 692



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/216 (21%), Positives = 98/216 (45%)

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           ++  + L+  + + G   EA     + K     P++++ N L+N   + G  +M  ++Y 
Sbjct: 157 ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYR 216

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            + R G+  +  TY   I  LC++G  ++A  + +++++  + PNA T S  I G C  K
Sbjct: 217 HLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHK 276

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            S+  ++  +++  +    +   +  ++  FC       A +V ++M+ + +APD  I  
Sbjct: 277 RSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYG 336

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            L       G    A+ L   M   G+     D+ +
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFK 372



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+P+V T  M+++ +C++  +  A ++F +M+  G  P V TY  ++ GH     L  A+
Sbjct: 593 ITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAI 652

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
              + M   G+QP+++T+  L+ G C  G  H  N+   E K
Sbjct: 653 NLYDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPK 694



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 41/203 (20%), Positives = 79/203 (38%), Gaps = 24/203 (11%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------------DS 171
           Q  KP+S    TH+ ++  L    K K +E+ L  + D                     +
Sbjct: 482 QGLKPNS---ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKA 538

Query: 172 FDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           ++L S+L    +      D  P  +++  L   +      + A   F  + + G  P + 
Sbjct: 539 YELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVI 598

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           +    ++       +  A   + +M+   I P+V T  +V+    K   ++ A+ ++  M
Sbjct: 599 TYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEM 658

Query: 290 ESMGFIPSVTTYNTLISGHCNKG 312
            + G  P + TY  L+ G CN G
Sbjct: 659 IARGLQPDIVTYTALLPGKCNFG 681


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 206/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T++ V+H L K R    +E+ LR +++     LP+   +++++Y
Sbjct: 245 FKEMVQRGIPPDLV--TYNSVVHALCKARAMDKAEAFLRQMVNKRV--LPNNWTYNNLIY 300

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR +  LP + + +  + SL    ++
Sbjct: 301 GY-----------------SSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 343

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++ N++++ +   G +    ++F  M   G  P   T+N L
Sbjct: 344 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 403

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 404 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 463

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   YN LI G+   G+      L  E++ NG+ +DI+ ++++I  LCK G+   A  
Sbjct: 464 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 523

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P+A  Y+ L+ G C+    E+A +++ +M+ +G  PN   +  L++ +
Sbjct: 524 IF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 582

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML++ + P +I+ S +  GL   G+   A   F +M   G+
Sbjct: 583 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGI 638



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 94/295 (31%), Positives = 151/295 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +KEMRR+ I P+V TL+M+M + CK G I+ A +VF  M   G  P V +YN +++
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+  KG L       +LM  +GI P+  TFN LI  +   G L +A  IF+EM+   V P
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTY T+I    ++G  +     + +M+  G+  D   YN LI G C  G   KA  L+
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  N +  +   +S++I   C       A  ++   +  G  P+  ++ MLM  +C  
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 550

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              ++A  V   M+   + P+ +    L +G    G+ +  + LFR+M  RG+ P
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKP 605



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 2/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + + N  +        V+ 
Sbjct: 181 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNK 240

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T N V+HA CK   +++A    + M +   +P+  TYN LI 
Sbjct: 241 ACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIY 300

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M ++ I P+V+T + L+   CK GK+ EA  +F  M     +P
Sbjct: 301 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNP 360

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +YN ++NGY   G       L++ ML +GI  D  T+N LI      G   KA  + 
Sbjct: 361 DVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIF 420

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 421 NEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTH 480

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +A E++ E++   M  D +  S + + L   G+   A  +F      GL P
Sbjct: 481 GSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHP 535



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 169/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+  + +M 
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 459

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+ Y  N ++  FC  G + +A E+   + + G    +  ++++I+  C  G + 
Sbjct: 460 DQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVM 519

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    +L    G+ P+ + +N L+ G+C  GK+ +A R+F  M +  + PNVV Y TL+
Sbjct: 520 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 579

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++G  + G SL+ EML+ GIK   + Y+ +I GL + G+T  A     ++ ++ + 
Sbjct: 580 NGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIA 639

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ ++ G    +  + A  L+K +     + N      ++    Q    + A ++
Sbjct: 640 MDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDL 699

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    + P  +  S + + L   G  E A  +F  M+  G  P
Sbjct: 700 FASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 745



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 164/346 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++   YA +    + TD F  M   G  P   + N  + +  +   +D A+  + EMR
Sbjct: 365 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+V T   V+ A C++G ++ A+E F  M   G  P    YN LI G C  G L 
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + +  NG+  +++ F+++I   CK G++ +A  IF       + P+ V YN L+
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ +++ Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   YS +I G      +  A   +  M  SG   +   + +++    +N  FD A  +
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  + I L+ +  G+    + E A  LF  +    L+P
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVP 710



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 170/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      + +  +++ C +       + R ++A
Sbjct: 86  CRSGPALAVALFNRAASRAQGPRVLSPT-----SHTYAILMDCCTR-------AHRPELA 133

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  N+   N ++  FC+    + A+++       +G +P V +Y+ L+ 
Sbjct: 134 LAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 193

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             C++G    A     +M + G    PNV+ +NT+I GF K+G +++A  +F EM    +
Sbjct: 194 SLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 253

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTYN++++   +    +   +   +M+   +  +  TYN LI G    G+ K+A  
Sbjct: 254 PPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVR 313

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ ++S++P+  T S L+   C     + A  ++ +M   G  P+   + ++++ + 
Sbjct: 314 VFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYA 373

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +APD    + L     +CG  + AM +F +M   G+ P
Sbjct: 374 TKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ N+I  N L+ GFC+  +  EA + 
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     +++ YN +I G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TY++++   C  +  ++A    + M+     PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM    + PD + LS L   L   GK + A  +F 
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 352 TMAMKGQNPDVF 363



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 3/241 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+++L   Y    K   A   F  M   G  P +      ++      R+D  L  ++E
Sbjct: 538 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 597

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG-HCNKG 312
           M +  I P+    ++++    + G    A   F  M   G    + TYN ++ G   N+ 
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
                  FK L   N ++ N+IT NT+I G  +  ++ EA  +F+ +  + + P+VVTY+
Sbjct: 658 FDEAIFLFKELRAMN-VKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYS 716

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDK 431
            +I    + G  E    ++  M   G + +    N ++  L K+ +  +A AYL K  ++
Sbjct: 717 IMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDER 776

Query: 432 N 432
           N
Sbjct: 777 N 777



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 4/196 (2%)

Query: 353 NRIFSEMKATNV-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           NR  S  +   V SP   TY  L++   +    E+  + + ++LR G++V+I+  N L+ 
Sbjct: 98  NRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLE 157

Query: 412 GLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-- 468
           G C+  +T +A   L+    +   VP+  +YS L+   C +  S +A  L + M   G  
Sbjct: 158 GFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAV 217

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN   +  ++  F +  D ++A ++  EM+++ + PD +  + +   L      + A 
Sbjct: 218 CSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAE 277

Query: 529 KLFRKMEIRGLLPKGF 544
              R+M  + +LP  +
Sbjct: 278 AFLRQMVNKRVLPNNW 293



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 18/205 (8%)

Query: 181 SILYSYRMCDSSPLVFDLLF---KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +ILYS        ++ D LF   +T   + KF   T++       G    I + N  L  
Sbjct: 607 TILYS--------IIIDGLFEAGRTVPAKMKFHEMTES-------GIAMDICTYNIVLRG 651

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L  +   D A+  +KE+R   +  N+ TLN ++    +   +E A ++F ++     +PS
Sbjct: 652 LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPS 711

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V TY+ +I+    +GL+  A    + M+  G +PN    N ++    KK ++  A    S
Sbjct: 712 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLS 771

Query: 358 EMKATNVSPNVVTYNTLINGYGQVG 382
           ++   N S   +T   L++ +   G
Sbjct: 772 KIDERNFSLEHLTAMLLVDLFSSKG 796



 Score = 43.5 bits (101), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/159 (20%), Positives = 72/159 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++ +     + F  A   F ++R       I + N  +  +  + RV+ A   +  + 
Sbjct: 645 YNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASIS 704

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+R+ P+V T ++++    K G++E A ++F +M++ G  P+    N ++     K  + 
Sbjct: 705 RSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIV 764

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            A  + + +++       +T   L+  F  KG   E  R
Sbjct: 765 RAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIR 803


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 22/368 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + K +  A     +M   G  P     N F+ S+   E++    
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D+A   Y EM       N   +       C +G  ++A ++ K M   GF+P  +TY+
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C+   +  A      M+  G+ P+V T+  LI  FCK G + +A  +F EM++ 
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP VVTY  LI+ Y +         ++  M+  G + + +TY AL+ GLCK G   KA
Sbjct: 288 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 347

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                D+++L PN  TY AL+ G C     + A +L  +M+ 
Sbjct: 348 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 407

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN  +++ L+  FC+    D A EV L+M +    P     + L   +   G+ +L
Sbjct: 408 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 467

Query: 527 AMKLFRKM 534
           AMK+  +M
Sbjct: 468 AMKVLSQM 475



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 191/412 (46%), Gaps = 14/412 (3%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S T+ T++ ++H   K ++   +  I   ++D+     P+ +    L    +C +  +  
Sbjct: 290 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC--RPNDVTYGALVD-GLCKAGNI-- 344

Query: 197 DLLFKTYAHRKKFRNATDTF----CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              F+ YA      ++ D+     C+ R +   P + +    +  L  + +VD A     
Sbjct: 345 SKAFEVYAKLIGTSDSADSDFYFPCEDR-HTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            M  +   PN    + ++  FCK G I+ A EVF  M   G++PSV TY +LI      G
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L LAMK  + M K+   PNV+T+  +I G C+ G+  +A ++ S M+    SPNVVTY 
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+G G+ G  ++   L+ +M R G   + +TY  LI  LC  G   KA  L+ ++ + 
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
                   Y   I G    K+   +  + + M   G  P   ++ ML+  F +    + A
Sbjct: 584 YWPKYLQGYRCAIQG--FSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641

Query: 493 AEVLLEMLE--KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            E+  EM+E    +  D+ + + L   L    + E A +L+ +M  RG +P+
Sbjct: 642 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPE 693



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 160/337 (47%), Gaps = 6/337 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D   +L D++L S   C+ + +V+D L   +    K  +A + F QM 
Sbjct: 384 ALVDGLCKAHKVDHAHELLDAMLSS--GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMT 441

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+LP + +    +  +    R+D+A+    +M ++  +PNV T   ++   C++G  E
Sbjct: 442 KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESE 501

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+++   ME  G  P+V TY  LI G    G + L++     M + G  PN +T+  LI
Sbjct: 502 KALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLI 561

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C  G L +A  +  EMK T     +  Y   I G+ +   + +G  + EEM   G  
Sbjct: 562 NHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLG--ILEEMESYGTV 619

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDK--NSLVPNASTYSALITGQCVRKNSERAF 458
                Y  LI    K G+ + A  L K++ +  +S+  +   Y++LI   C+    E AF
Sbjct: 620 PIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAF 679

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +LY  M R G  P   +F  L+    + + +D A ++
Sbjct: 680 RLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 12/313 (3%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK---LGIIERAVEVFK 287
           C   +S L+++   D A+ F   MR N   PNV T   ++  F K   LG  +R + +  
Sbjct: 45  CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINM-- 102

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M + G  P+ + +N+L+  +CN+   + A K  N M   G  P  + +N  I   C + 
Sbjct: 103 -MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 161

Query: 348 KLHE------ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           KL        A +I+ EM A N   N V           VG  +    L +EM+R G   
Sbjct: 162 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 221

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY+ +I  LC   K +KA  L +++    + P+  TY+ LI   C     E+A  L+
Sbjct: 222 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 281

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC P    +  L+  + + +   +A ++   M++    P+ +    L  GL   
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341

Query: 522 GKDELAMKLFRKM 534
           G    A +++ K+
Sbjct: 342 GNISKAFEVYAKL 354



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 116/271 (42%), Gaps = 12/271 (4%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+     M     IP+V TY TL+SG   K  L    +  N+M   G  PN   FN+L
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE---------MGASL 390
           +  +C +     A ++ + M      P  V YN  I   G +   E         +   +
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFI---GSICGQEKLPSPDLLDLAEKI 175

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y EML     ++ +        LC  GK  KA  L+K++ +   VP+ STYS +IT  C 
Sbjct: 176 YGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCH 235

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               E+AF L++ M   G  P+ + + +L+ +FC+    ++A  +  EM     +P  + 
Sbjct: 236 ATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVT 295

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + L        +   A  +F +M   G  P
Sbjct: 296 YTALIHAYLKAKQVPQANDIFHRMVDAGCRP 326



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/294 (21%), Positives = 118/294 (40%), Gaps = 31/294 (10%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   GF     T        C +G  + A+   +++E+   + + +    +I G  +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADAL---DMIEREDFKLDTVLCTHMISGLMEASY 57

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             EA      M+  +  PNVVTY TL++G+ +         +   M+  G   +   +N+
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN------SERAFQLYK 462
           L+   C E     A  L+  +      P    Y+  I   C ++        + A ++Y 
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+ + C  NK          C    FD+A +++ EM+ K   PD+   S++ + L H  
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 523 KDELAMKLFRKMEIRGLLPKG----------------------FDKLRTINCAP 554
           K E A  LF++M++ G+ P                        F+++R++ C+P
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 291


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 7/334 (2%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A +   +M   GFLP       FLS + D            + +  RI    Y + 
Sbjct: 277 RVDDAREVLLEMEGSGFLP-----GGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCI- 330

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++  C++G IE+A EV   +   G  PS  +YN L++ +C +G +  A+     ME+ 
Sbjct: 331 -LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEER 389

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G++PN ITFNT+I  FC+ G++  A      M    VSP V TYN+LINGYGQ G+    
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRC 449

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
               +EM + GIK ++++Y +LI  LCK+ K   A  ++ D+    + PNA  Y+ LI  
Sbjct: 450 FEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEA 509

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + AF+ +  MI+SG       +  L++   +N    +A ++ L+M  K   PD
Sbjct: 510 SCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPD 569

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            I  + L SG       +  ++L+ KM+I G+ P
Sbjct: 570 VITYNSLISGYAKSVNTQKCLELYDKMKILGIKP 603



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 174/390 (44%), Gaps = 28/390 (7%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S P   D L    +  K    ATD +  MR  GF+P   S N+ L +L+DS   +  L  
Sbjct: 85  SKPFFSDNLLWLCSVSKMLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAV 144

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + ++  +   P+       + A   L  +++  E+ K+M   G  PSV  YN ++ G C 
Sbjct: 145 FADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCK 204

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              +  A K  + M +  + PN +T+NTLI G+CK G + EA      MK  NV  N+VT
Sbjct: 205 VRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVT 264

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNG----------------------------IKVD 402
           YN+L+NG    G  +    +  EM  +G                            I++D
Sbjct: 265 YNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRID 324

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             TY  L+ GLC+ G+ +KA  ++  L +N + P+  +Y+ L+   C   + ++A    +
Sbjct: 325 ERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTE 384

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   G  PN+  F  ++S FC+  + D A   +  M+EK ++P     + L +G    G
Sbjct: 385 QMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKG 444

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
                 +   +M+  G+ P        INC
Sbjct: 445 HFVRCFEFLDEMDKAGIKPNVISYGSLINC 474



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 164/332 (49%), Gaps = 1/332 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A +   ++ + G  P   S N  +++      V  A+   ++M    + PN  T N
Sbjct: 340 RIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFN 399

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            V+  FC+ G ++ A    + M   G  P+V TYN+LI+G+  KG      +F + M+K 
Sbjct: 400 TVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKA 459

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+PNVI++ +LI   CK  KL +A  + ++M    VSPN   YN LI     +   +  
Sbjct: 460 GIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDA 519

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
              ++EM+++GI   ++TYN LI GL + G+ KKA  L   +      P+  TY++LI+G
Sbjct: 520 FRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISG 579

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                N+++  +LY  M   G +P    F  L+   C+ E      ++  EML+  + PD
Sbjct: 580 YAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPD 638

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + +E+       G    AM L ++M  +G+
Sbjct: 639 QFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGV 670



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 178/372 (47%), Gaps = 12/372 (3%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + +++L   Y      + A  T  QM + G  P   + N  +S   ++  VD A  + 
Sbjct: 359 SKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWV 418

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-N 310
           + M    +SP V T N +++ + + G   R  E    M+  G  P+V +Y +LI+  C +
Sbjct: 419 RRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKD 478

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           + L+   +   +++ + G+ PN   +N LI   C   KL +A R F EM  + +   +VT
Sbjct: 479 RKLIDAEIVLADMIGR-GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVT 537

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTLING G+ G  +    L+ +M   G   D++TYN+LI G  K   T+K   L   + 
Sbjct: 538 YNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMK 597

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + P   T+  LI   C ++      ++++ M++    P++ ++  ++ ++ ++ +  
Sbjct: 598 ILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVM 656

Query: 491 RAAEVLLEMLEKCMAPD-----SIILSEL----YSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A  +  +M+++ +  D     S+IL+ L     S + H   D  A  L  K++   +L 
Sbjct: 657 KAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILI 716

Query: 542 KGFDKLRTINCA 553
           KG   L+  N A
Sbjct: 717 KGLCDLKDFNGA 728



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 145/290 (50%), Gaps = 2/290 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +K  +A      M   G  P  E  N  + +     ++  A  F+ EM ++ I   + T 
Sbjct: 479 RKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTY 538

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N +++   + G +++A ++F  M   G  P V TYN+LISG+         ++  + M+ 
Sbjct: 539 NTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKI 598

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI+P V TF+ LI+  C+K  +   +++F EM   ++ P+   YN +I  Y + GN   
Sbjct: 599 LGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMK 657

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             SL+++M+  G+  D +TYN+LIL   ++ +  +  +LV D+    LVP   TY+ LI 
Sbjct: 658 AMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIK 717

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           G C  K+   A+  Y+ M+  G   N  +   L+S   + E   R A+++
Sbjct: 718 GLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGL-REEGMLREAQIV 766



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 3/258 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           + FD ++ S    D++ + ++ L        + + A D F QM   G  P + + N  +S
Sbjct: 521 RFFDEMIQS--GIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLIS 578

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               S      L  Y +M+   I P V T + +++A  K G++    ++F+ M  M  +P
Sbjct: 579 GYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTMD-KMFQEMLQMDLVP 637

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
               YN +I  +   G +  AM     M   G+  + +T+N+LI  + +  ++ E   + 
Sbjct: 638 DQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEIKHLV 697

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            +MKA  + P V TYN LI G   + +       Y EM+  G+ +++     LI GL +E
Sbjct: 698 DDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLISGLREE 757

Query: 417 GKTKKAAYLVKDLDKNSL 434
           G  ++A  +  +L    L
Sbjct: 758 GMLREAQIVSSELSIGGL 775


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 162/312 (51%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+P+ YT   ++  +CK+G +E AV+VF  M 
Sbjct: 151 NTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEML 210

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + PS   YN LI G+C+ G L +A++++  M + GI   V T+N L+       + 
Sbjct: 211 TKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARA 270

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  +  EM+    SP+V TYN LINGY + GN +    ++EEM + G++   +TY +L
Sbjct: 271 SDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSL 330

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I    ++G+ ++   L     K  + P+   Y+ALI   C   + ERA+++   M +   
Sbjct: 331 IYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRI 390

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM  FC     D A  ++ EM ++ + PD +  + L SG    G  + A++
Sbjct: 391 PPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALR 450

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 451 VRDEMMDKGFNP 462



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 151/291 (51%), Gaps = 2/291 (0%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNK 311
           E+ R    PN  T N V+  FC  G ++ A+EV + M E  G  P   TY TLISG C  
Sbjct: 137 ELLRQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKI 196

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A+K F  ++ K  + P+ + +N LI G+C  GKL  A +   +M    ++  V T
Sbjct: 197 GRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVAT 256

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN L++       +    ++ EEM +NG   D+ TYN LI G CKEG  KKA  + +++ 
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS 316

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  +   A TY++LI     +   +   +L+   ++ G RP+  ++  L+++ C   D +
Sbjct: 317 QKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDME 376

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA E++ EM +K + PD +  + L  G    G+ + A  L  +M  RG+ P
Sbjct: 377 RAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQP 427



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 159/324 (49%), Gaps = 1/324 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYG-FLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +  L   +    +  +A   F +M   G   P     N  +    D  ++D+AL + ++M
Sbjct: 186 YATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDM 245

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            +  I+  V T N++MHA         A  V + M+  GF P V TYN LI+G+C +G  
Sbjct: 246 VQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNE 305

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A++    M + G++   +T+ +LI+ F +KG++ E +R+F+      + P+VV YN L
Sbjct: 306 KKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNAL 365

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           IN +   G+ E    +  EM +  I  D +TYN L+ G C  G+  +A  L+ ++ K  +
Sbjct: 366 INSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGI 425

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  +Y+ LI+G  ++ + + A ++   M+  G  P    +  L+   C+    D A  
Sbjct: 426 QPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAEN 485

Query: 495 VLLEMLEKCMAPDSIILSELYSGL 518
           ++ EM+ K + PD      L  GL
Sbjct: 486 LMKEMVAKGITPDDSTYISLIEGL 509



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 155/312 (49%), Gaps = 1/312 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FD +L    +  S+ ++++ L   Y    K   A      M   G    + + N  + 
Sbjct: 204 KVFDEMLTKGEVAPSA-VMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMH 262

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +L    R   A    +EM++N  SP+V+T N++++ +CK G  ++A+EVF+ M   G   
Sbjct: 263 ALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRA 322

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  TY +LI     KG +    +  N+  K GI+P+V+ +N LI   C  G +  A  I 
Sbjct: 323 TAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIM 382

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           +EM+   + P+ +TYNTL+ G+  +G  +   +L +EM + GI+ D+++YN LI G   +
Sbjct: 383 AEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  K A  +  ++      P   TY+ALI G C  +  + A  L K M+  G  P+   +
Sbjct: 443 GDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTY 502

Query: 477 EMLMSTFCQNED 488
             L+      ++
Sbjct: 503 ISLIEGLTTEDE 514



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 18/280 (6%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           ++T+ T+++++H L  + +   + ++L         ++    F   +++Y          
Sbjct: 251 AMTVATYNLLMHALFMDARASDAYAVLE--------EMQKNGFSPDVFTY---------- 292

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           ++L   Y      + A + F +M   G      +    +       +V      +    +
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P+V   N ++++ C  G +ERA E+   ME     P   TYNTL+ G C  G L  
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    + M K GIQP+++++NTLI G+  KG + +A R+  EM     +P ++TYN LI 
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           G  ++   +   +L +EM+  GI  D  TY +LI GL  E
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 99/188 (52%), Gaps = 10/188 (5%)

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           R+++++K+ +V   V + + L++       S    +L+ ++ R  + +   T+N ++  L
Sbjct: 71  RLYAQLKSLSVPIPVASLHPLLSSL----PSAPAFALFADIYRLRLPLCTTTFNIMLRHL 126

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI-RSGCRPN 472
           C  GK  +A  L++ + +    PNA TY+ +I G C R   + A ++ + M  R G  P+
Sbjct: 127 CATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPD 182

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLF 531
           K+ +  L+S +C+    + A +V  EML K  +AP +++ + L  G    GK ++A++  
Sbjct: 183 KYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYR 242

Query: 532 RKMEIRGL 539
             M  RG+
Sbjct: 243 EDMVQRGI 250


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 159/314 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++++        +  +A +    +  YG  P   S N  L  L  +ER + A 
Sbjct: 232 CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAE 291

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM      PNV T NM++   C+ G++E A+EV + M   G  P+  +YN L+   
Sbjct: 292 KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAF 351

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  AM+F  LM   G  P+++++NTL+   C+ G++  A  +  ++K    SP +
Sbjct: 352 CKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVL 411

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++YNT+I+G  + G ++    L +EM   G++ DI+TY+ +  GLC+E + ++A      
Sbjct: 412 ISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCK 471

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P A+ Y+A++ G C R+ +  A  L+  MI SGC PN+  + +L+        
Sbjct: 472 VQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGL 531

Query: 489 FDRAAEVLLEMLEK 502
              A E+  ++  +
Sbjct: 532 VKEARELFAQLCSR 545



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 174/364 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + + +L +    R  ++ A     +M D G  P I + N  L+ +    RV+ 
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ F K +      PN  + N+V+         E A ++ + M   G  P+V T+N LIS
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +GL+  AM+    M + G  PN +++N L+  FCK+ K+H+A      M +    P
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++V+YNTL+    + G  ++   L  ++   G    +++YN +I GL K GKTK+A  L+
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELL 434

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    L P+  TYS + +G C     E A + +  +   G RP   ++  ++   C+ 
Sbjct: 435 DEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKR 494

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
            +   A ++   M+     P+    + L  GL + G  + A +LF ++  RG++ K   K
Sbjct: 495 RETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNKKLMK 554

Query: 547 LRTI 550
             +I
Sbjct: 555 KGSI 558



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 154/310 (49%), Gaps = 3/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++    + ++D A     +M    + P+ YT N ++   C  G    A+ V ++M  
Sbjct: 138 NAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +P V TY  L+   C +     AMK  + M   G  P+++T+N ++ G C++G++ +
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A      + +    PN V+YN ++ G       E    L EEM   G   +++T+N LI 
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC+ G  + A  +++ + +    PN+ +Y+ L+   C +K   +A +  + M+  GC P
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  L++  C+N + D A E+L ++ +K  +P  I  + +  GL   GK + A++L 
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELL 434

Query: 532 RKMEIRGLLP 541
            +M  +GL P
Sbjct: 435 DEMTSKGLQP 444



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 148/310 (47%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  L    R   AL   ++M R    P+V T  +++ A CK    ++A+++   M  
Sbjct: 170 NTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHD 229

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P + TYN +++G C +G +  AM+F   +   G +PN +++N ++ G     +  +
Sbjct: 230 KGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWED 289

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++  EM      PNVVT+N LI+   + G  E    + E+M + G   + L+YN L+ 
Sbjct: 290 AEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLH 349

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             CK+ K  KA   V+ +      P+  +Y+ L+T  C     + A +L   +   GC P
Sbjct: 350 AFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSP 409

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
               +  ++    +      A E+L EM  K + PD I  S + SGL    + E A++ F
Sbjct: 410 VLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTF 469

Query: 532 RKMEIRGLLP 541
            K++  G+ P
Sbjct: 470 CKVQDMGIRP 479



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 127/265 (47%), Gaps = 7/265 (2%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P V  YN +++G+C  G L  A   + L+    ++P+  T+NTLI G C +G+   A  +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAA---RRLVADMPVEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             +M      P+VVTY  L+    +    +    L +EM   G   DI+TYN ++ G+C+
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           EG+ + A   +K+L      PN  +Y+ ++ G    +  E A +L + M   GC PN   
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           F ML+S  C+    + A EVL +M +    P+S+  + L        K   AM+    M 
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMV 368

Query: 536 IRGLLPK--GFDKLRTINCAPENGE 558
            RG  P    ++ L T  C   NGE
Sbjct: 369 SRGCYPDIVSYNTLLTALC--RNGE 391



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 134/274 (48%), Gaps = 2/274 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+G+  ++ ++   KL + +  +++ C  + + F++L      R     A +   QM  
Sbjct: 277 VLKGLFTAERWEDAEKLMEEM--AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQ 334

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YG  P   S N  L +    +++  A+ F + M      P++ + N ++ A C+ G ++ 
Sbjct: 335 YGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 394

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+E+   ++  G  P + +YNT+I G    G    A++  + M   G+QP++IT++T+  
Sbjct: 395 AIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIAS 454

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C++ ++ EA R F +++   + P    YN ++ G  +   +     L+  M+ +G   
Sbjct: 455 GLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMP 514

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  TY  L+ GL  EG  K+A  L   L    +V
Sbjct: 515 NESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 163/323 (50%), Gaps = 2/323 (0%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +D   LP + S N  + S+     VD A+  ++EM   +  P+ YT   +M   CK+  I
Sbjct: 173 KDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRI 232

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + AV +   M+  G  PS  T+N LI+G C KG  +   K  + M   G  PN +T+NTL
Sbjct: 233 DEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTL 292

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G C KGKL +A  +   M ++   PN VTY T+ING  + G +  GA +   M   G 
Sbjct: 293 IHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGY 352

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKD-LDKNSLVPNASTYSALITGQCVRKNSERAF 458
            V+   Y+ L+ GL KEGK+++A  L K+ +DK   + N   YSAL+ G C  +  + A 
Sbjct: 353 IVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKL-NTVLYSALVDGLCRDRKPDEAM 411

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++   M   GC PN   F  LM  F +  +  +A EV  +M +   A + +  S L  GL
Sbjct: 412 KILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGL 471

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              GK   AM ++ KM   G  P
Sbjct: 472 CKDGKVMEAMMVWAKMLATGCRP 494



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 232/502 (46%), Gaps = 22/502 (4%)

Query: 40  TLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEP------KGQDLDFVNIAYSHLIHSD 93
           TL++N    N S  E+S        PI  +    P      K  D  F ++  ++   SD
Sbjct: 36  TLNQNNDLENGSEPESS--------PISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSD 87

Query: 94  WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
           +  L  +   L   R+++ +   +  +V+   F  + + H P+      + +      K 
Sbjct: 88  FNSLEKV---LNRMRLENRVFSEKSFFVM---FKAYGKAHLPNKAIELFYRMSFEFYCK- 140

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM-CDSSPLVFDLLFKTYAHRKKFRNA 212
              KS  S+L  I+ +   D   + ++ ++ +  M    + L F+L+ K+        NA
Sbjct: 141 PTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNA 200

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
            + F +M     +P   +    +  L   +R+D A+    EM+     P+  T N++++ 
Sbjct: 201 IELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLING 260

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            CK G   R  ++  NM   G +P+  TYNTLI G C KG L  A+   + M  +   PN
Sbjct: 261 LCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPN 320

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
            +T+ T+I G  K+G+  +  R+   M+      N   Y+ L++G  + G SE    L++
Sbjct: 321 EVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFK 380

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           E +  G K++ + Y+AL+ GLC++ K  +A  ++ ++      PNA T+S+L+ G     
Sbjct: 381 ESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVG 440

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           NS +A +++K M +  C  N+  + +L+   C++     A  V  +ML     PD +  S
Sbjct: 441 NSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYS 500

Query: 513 ELYSGLHHCGKDELAMKLFRKM 534
            +  GL   G  E A+KL+ +M
Sbjct: 501 SMIQGLCDAGSVEEALKLYNEM 522



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 6/352 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   D  D    L D +      C  SP  F++L      +  F   T     M 
Sbjct: 221 TLMDGLCKVDRIDEAVSLLDEM--QIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMF 278

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +  L    ++D AL     M  ++  PN  T   +++   K G   
Sbjct: 279 LKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRAL 338

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
               V   ME  G+I +   Y+ L+SG   +G    AM+ FK  M+K G + N + ++ L
Sbjct: 339 DGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDK-GCKLNTVLYSAL 397

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G C+  K  EA +I SEM     +PN  T+++L+ G+ +VGNS     ++++M +   
Sbjct: 398 VDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINC 457

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             + + Y+ LI GLCK+GK  +A  +   +      P+   YS++I G C   + E A +
Sbjct: 458 AENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALK 517

Query: 460 LYKSM--IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           LY  M  +    +P+   + +L +  C+     RA ++L  ML++   PD +
Sbjct: 518 LYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLV 569



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 117/268 (43%), Gaps = 20/268 (7%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +++  L       +K   A     +M D G  P   + +  +    +      A+
Sbjct: 387 CKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAI 446

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K+M +   + N    ++++H  CK G +  A+ V+  M + G  P V  Y+++I G 
Sbjct: 447 EVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGL 506

Query: 309 CNKGLLSLAMKFKNLM---EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           C+ G +  A+K  N M   E +  QP+VIT+N L    CK+  +  A  + + M      
Sbjct: 507 CDAGSVEEALKLYNEMLCLEPDS-QPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCD 565

Query: 366 PNVVTYNTLINGYGQ-VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           P++VT N  +    + +   + GA   +E               L++ L K  +   A+ 
Sbjct: 566 PDLVTCNIFLRMLREKLDPPQDGAKFLDE---------------LVVRLLKRQRNLGASK 610

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRK 452
           +V+ + +  L P AST++ ++   C  K
Sbjct: 611 IVEVMLQKFLSPKASTWARVVHELCQPK 638



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 11/288 (3%)

Query: 284 EVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++F +   MG F    +T+ +LI  +      +   K  N M    ++  V +  +    
Sbjct: 57  KIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKVLNRMR---LENRVFSEKSFFVM 113

Query: 343 FCKKGKLHEANR---IFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN- 397
           F   GK H  N+   +F  M       P V ++N+++N   Q G  +     Y  ++   
Sbjct: 114 FKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAK 173

Query: 398 --GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
              I  ++L++N +I  +CK G    A  L +++     VP+A TY  L+ G C     +
Sbjct: 174 DMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRID 233

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   M   GC P+   F +L++  C+  DF R  +++  M  K   P+ +  + L 
Sbjct: 234 EAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLI 293

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
            GL   GK + A+ L  +M     +P        IN   + G    G 
Sbjct: 294 HGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGA 341


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           + P VF  +++            A   F +M+  G +P   + N  +       R+D  +
Sbjct: 91  AKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTV 150

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM+     P+V T N +++ FCK G + + +E F+ M+  G  P+V +Y+TL+   
Sbjct: 151 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAF 210

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A+KF   M + G+ PN  T+ +LI  +CK G L +A R+ +EM    V  NV
Sbjct: 211 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNV 270

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVK 427
           VTY  LI+G     N   G  L +EM+   IKV ++T+  LI GLCK     KA  Y  +
Sbjct: 271 VTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGR 330

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
             +   L  NA+ Y+A+I G C     E A  L++ M + G  P++  +  LM    +  
Sbjct: 331 ISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQG 390

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   A  +  +M+E  M  D +  + L  GL HC + + A     +M   G+ P
Sbjct: 391 NVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 444



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 170/365 (46%), Gaps = 1/365 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +FD +  +  +C     VFD LF           A   F +M+ +   P   SCN  L  
Sbjct: 10  VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHK 69

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                + D    F+K+M      P V+T N+++   CK G +E A  +F+ M+  G IP 
Sbjct: 70  FAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPD 129

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYN++I G    G L   + F   M+    +P+VIT+N LI  FCK GKL +    F 
Sbjct: 130 TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFR 189

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EMK   + PNVV+Y+TL++ + + G  +     Y +M R G+  +  TY +LI   CK G
Sbjct: 190 EMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIG 249

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               A  L  ++ +  +  N  TY+ALI G C  +N      L   M+    +     F 
Sbjct: 250 NLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFC 309

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           +L+   C+N+   +A +    +     +  ++ I + +  GL    + E A  LF +M  
Sbjct: 310 VLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQ 369

Query: 537 RGLLP 541
           +GL+P
Sbjct: 370 KGLVP 374



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 151/352 (42%), Gaps = 53/352 (15%)

Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDS--------DSFDLPSKLFDSILYS 185
           T+ T++I++  + K    +++  +      RG++          D F    +L D++ + 
Sbjct: 94  TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFF 153

Query: 186 YRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
             M    C+   + ++ L   +    K     + F +M+  G  P + S +  + +    
Sbjct: 154 EEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKE 213

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +  A+ FY +MRR  + PN YT   ++ A+CK+G +  A  +   M  +G   +V TY
Sbjct: 214 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTY 273

Query: 302 NTLISGHCN-----KGL------LSLAMK-------------------------FKNLME 325
             LI G C      +GL      + L +K                         F  +  
Sbjct: 274 TALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISN 333

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G+Q N   +  +I G CK  ++  A  +F +M    + P+   Y +L++G  + GN  
Sbjct: 334 DFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVL 393

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
              +L ++M+  G+K+D+L Y +L+ GL    + +KA   ++++    + P+
Sbjct: 394 EALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 445



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 100/219 (45%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N   P    F+ L       G + EA + FS+MK   V P   + N L++ + ++G ++
Sbjct: 18  RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                +++M+  G K  + TYN +I  +CKEG  + A  L +++    L+P+  TY+++I
Sbjct: 78  GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G       +     ++ M    C P+   +  L++ FC+     +  E   EM    + 
Sbjct: 138 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK 197

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P+ +  S L       G  + A+K +  M   GL+P  +
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 236



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/150 (19%), Positives = 72/150 (48%), Gaps = 1/150 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            +  L  ++ V  A+ ++  +  +  +  N      ++   CK   +E A  +F+ M   
Sbjct: 311 LIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQK 370

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P  T Y +L+ G+  +G +  A+  ++ M + G++ +++ + +L++G     +L +A
Sbjct: 371 GLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKA 430

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
                EM    + P+ V   +++  + ++G
Sbjct: 431 RSFLEEMIGEGIHPDEVLCISVLKKHYELG 460


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 173/340 (50%), Gaps = 1/340 (0%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y        A    C+M + GF+    +    +++  +   V+ A+ F+ ++ +  +SPN
Sbjct: 254 YCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPN 313

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FK 321
           +   + ++   CK G +++A E+ + M   G+ P+V T+ +LI G C KG    A + F 
Sbjct: 314 LINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFL 373

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
            L+  +  +PNV T+  +I G+CK+ KL  A  +F  MK   + PN  TY TLI+G+ + 
Sbjct: 374 KLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKA 433

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           GN      L E M   G   +  TYN+++ GLCK G+ ++A  L+    +N +  +  TY
Sbjct: 434 GNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTY 493

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI+ QC R +  +A      M + G +P+ H++  L++ FC+      + ++  E+++
Sbjct: 494 TILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIK 553

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +AP     + +  G     K  LA+K F+KM   G  P
Sbjct: 554 LGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAP 593



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 161/345 (46%), Gaps = 1/345 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           L+   +  +     A   F ++   G  P + + +  +S L     V  A    +EM +N
Sbjct: 284 LIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKN 343

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
              PNVYT   ++H  CK G  ERA  +F K + S  + P+V TY  +ISG+C +  LS 
Sbjct: 344 GWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSR 403

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A      M++ G+ PN  T+ TLI G CK G   +A  +   M      PN  TYN++++
Sbjct: 404 AEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVD 463

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G +E    L     +N I+ D +TY  LI   CK     +A   +  + K    P
Sbjct: 464 GLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQP 523

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   Y+ LI   C +   + + +L+  +I+ G  P K  +  ++  +C+ +    A +  
Sbjct: 524 DIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFF 583

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +M +   APDSI    L SGL    + + A +L+  M  +GL P
Sbjct: 584 QKMSDHGCAPDSISYGALISGLCKESRLDEARQLYDTMIDKGLSP 628



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 167/350 (47%), Gaps = 5/350 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V + +   +A   K + A D    MR+ G +      N+ +    +   V+ A   + EM
Sbjct: 176 VVECMVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEM 235

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+  T   ++  +C+ G +  A      M   GF+    T   +I+  C K L+
Sbjct: 236 SARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLV 295

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A+ F + + K G+ PN+I ++++I G CK+G + +A  +  EM      PNV T+ +L
Sbjct: 296 NRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 355

Query: 375 INGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R +  K ++ TY A+I G CKE K  +A  L + + +  
Sbjct: 356 IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQG 415

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN +TY+ LI G C   N  +A++L + M   G  PN   +  ++   C+    + A 
Sbjct: 416 LVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAF 475

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           ++L    +  +  D +  + L S    C + ++  A+    KM   G  P
Sbjct: 476 KLLNTGFQNQIEADGVTYTILIS--EQCKRADMNQALVFLNKMFKVGFQP 523



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 139/284 (48%), Gaps = 1/284 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +R   + P + +    +S     E++  A   ++ M+   + PN  T   ++   CK G 
Sbjct: 376 IRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGN 435

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             +A E+ + M + GF P+  TYN+++ G C +G    A K  N   +N I+ + +T+  
Sbjct: 436 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   CK+  +++A    ++M      P++  Y TLI  + +    +    L++E+++ G
Sbjct: 496 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 555

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +     TY ++I G C+E K   A    + +  +   P++ +Y ALI+G C     + A 
Sbjct: 556 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 615

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           QLY +MI  G  P +     L   +C+ EDF  +A V+LE L K
Sbjct: 616 QLYDTMIDKGLSPCEVTRVTLTYEYCKTEDF-ASAMVILERLNK 658



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 3/244 (1%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           F  A +    M + GF P   + N  +  L    R + A        +N+I  +  T  +
Sbjct: 436 FSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTI 495

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++   CK   + +A+     M  +GF P +  Y TLI+  C + ++  + K  + + K G
Sbjct: 496 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 555

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           + P   T+ ++I G+C++ K+  A + F +M     +P+ ++Y  LI+G  +    +   
Sbjct: 556 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 615

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            LY+ M+  G+    +T   L    CK      A  +++ L+K   +    T   LI   
Sbjct: 616 QLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHT---LIRKL 672

Query: 449 CVRK 452
           C  K
Sbjct: 673 CCEK 676



 Score = 58.5 bits (140), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 87/220 (39%), Gaps = 3/220 (1%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  + + +L      R     A     +M   GF P I      +++      +  +  
Sbjct: 487 EADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEK 546

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + E+ +  ++P   T   ++  +C+   +  AV+ F+ M   G  P   +Y  LISG C
Sbjct: 547 LFDEVIKLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLC 606

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  L  A +  + M   G+ P  +T  TL + +CK      A  I   +   N    + 
Sbjct: 607 KESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL---NKKLWIR 663

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
           T +TLI          + A  + ++L   + VD +T  A 
Sbjct: 664 TVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAF 703



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/187 (19%), Positives = 78/187 (41%)

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++  + ++G  +    +  +M   G+ +     N +IL   +    + A  +  ++    
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P++ TY  +I G C   N   A +    M+  G   +     ++++ FC+    +RA 
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
               ++ +  ++P+ I  S + SGL   G  + A +L  +M   G  P  +     I+  
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 554 PENGEKE 560
            + G  E
Sbjct: 360 CKKGWTE 366


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 162/326 (49%), Gaps = 3/326 (0%)

Query: 219 MRD---YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           +RD   +G  P + S N  L  L  ++R        +EM R    PN+ T N ++   C+
Sbjct: 215 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 274

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+ ER  EV   M   G  P +  Y T+I G C +G L +A +  N M   G++PNV+ 
Sbjct: 275 NGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVC 334

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTL+ G C   +  E   + +EM   +   + VT+N L++ + Q G  +    L E+ML
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G   D++TY  +I G CKEG   +A  L+K +      PN  +Y+ ++ G C  +   
Sbjct: 395 VHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   MI+ GC  N   F  L++  C+    ++A E+L +ML    +PD I  S + 
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   GK + A++L   M  +G+ P
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSP 540



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 35/320 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  YG  P +   N  L  L  +ER +       EM       +  T N+++  FC+ G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV---- 333
           +++R +E+ + M   G +P V TY T+I+G C +GL+  A+     M   G +PN     
Sbjct: 382 LVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 334 -------------------------------ITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                          ITFNTLI   CKKG + +A  +  +M   
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP++++Y+T+I+G G+ G ++    L   M+  G+  + + Y+++   L +EG+  K 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  ++   ++  +A  Y+A+I+  C R  +ERA +    M+ SGC PN+  + +L+  
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 483 FCQNEDFDRAAEVLLEMLEK 502
                    A E+L E+  K
Sbjct: 622 LASEGFVKEAQEMLTELCSK 641



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 145/320 (45%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P++ +       L    R+  AL    EM R   +P     ++++ A C+ G    
Sbjct: 123 YTYFPVVRA-------LCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV V +++ + G    V   N +++  C++G +  A+     +   G +P+V+++N ++ 
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLK 235

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +      +  EM      PN+VT+NTLI+   + G  E    +  +M  +G   
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTP 295

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  K A  ++  +    L PN   Y+ L+ G C  +  E   +L 
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M    C  +   F +L+  FCQN   DR  E+L +ML     PD I  + + +G    
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKE 415

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 416 GLIDEAVMLLKSMTACGCKP 435



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 116/241 (48%), Gaps = 3/241 (1%)

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN +++G+C  G L  A   + L     + PN  T+  ++   C +G++ +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
               +P    Y+ ++    + G       + E++   G  +D+   N ++  +C +G   
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           KA +L++DL      P+  +Y+A++ G C+ K      +L + M+R  C PN   F  L+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           S  C+N  F+R  EVL +M E    PD  + + +  G+   G  ++A ++  +M   GL 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 541 P 541
           P
Sbjct: 330 P 330



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 127/293 (43%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+ A C  G I  A+ V   M   G  P    Y+ ++   C  G    A+
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    +   G   +V   N ++   C +G + +A  +  ++ +    P+VV+YN ++ G 
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L EEM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDI 297

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + + A ++   M   G +PN   +  L+   C  E ++   E+L E
Sbjct: 298 RMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M + G +P        IN
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVIN 410



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 126/280 (45%), Gaps = 12/280 (4%)

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  +C+ G +E A  +     ++   P+  TY  ++   C +G ++ A+   + M +
Sbjct: 94  NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P    ++ ++   C+ G    A R+  ++ A   + +V   N ++N     G+ + 
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK 210

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  ++   G + D+++YNA++ GLC   +      L++++ + +  PN  T++ LI+
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C     ER  ++   M   GC P+  ++  ++   C+      A E+L  M    + P
Sbjct: 271 YLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKP 330

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           + +  + L  GL  C  +       R  E   LL + FDK
Sbjct: 331 NVVCYNTLLKGL--CSAE-------RWEETEELLAEMFDK 361


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 184/395 (46%), Gaps = 46/395 (11%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDT-----FCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           ++P+ F      + H  K  N T T     F  M      P + S    LS L   +   
Sbjct: 54  NTPISFQQQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYS 113

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                Y +MR + ISP+  TLN++++  C +  +   + V   +   G+IP + TY TLI
Sbjct: 114 QVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLI 173

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG------KLH--------- 350
            G C +  +S A      M+K G  PN IT+ TL+ G C+ G      KLH         
Sbjct: 174 KGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSL 233

Query: 351 --------------------------EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
                                     EA  +F EMK   ++P V++Y +LI+G+   G  
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKW 293

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E    L+ EM+  G++ +++T+N LI  LCKEGK  +A  L++ + +  +VPN  TY++L
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+  +   A +L+ SM   GC P+   + +L++ +C+    + A ++   ML+   
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            PD      L +GL   GK   A KLF  M++ G+
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGI 448



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 153/322 (47%), Gaps = 2/322 (0%)

Query: 222 YG--FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           YG  F P++ S +  + +L    R D A   ++EM+   ++P V +   ++H FC  G  
Sbjct: 234 YGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKW 293

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A  +F  M + G  P+V T+N LI   C +G +  A     +M + GI PN++T+N+L
Sbjct: 294 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 353

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  G L+ A  +F  M +    P+V+ Y  LINGY +    E    LY  ML+ G 
Sbjct: 354 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + D+ TY AL+ GL + GK   A  L   +    +  +   Y   + G C       A +
Sbjct: 414 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 473

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+  +     + +   F  L+   C+    + A E+  ++ ++ + PD +  + +     
Sbjct: 474 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 533

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G+   A  LF+KME  G  P
Sbjct: 534 RGGQVVKANILFQKMEKNGCTP 555



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 161/381 (42%), Gaps = 41/381 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L    A  K +      + QMR  G  P   + N  L+ L +  RV   L     + 
Sbjct: 99  FTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGIL 158

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P++ T   ++   C    I +A  +F  M+ +G  P+  TY TL+ G C  G +S
Sbjct: 159 RRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNIS 218

Query: 316 LAMKF--------------------------------------KNLMEK---NGIQPNVI 334
           +A+K                                       ++L E+    G+ P VI
Sbjct: 219 IALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVI 278

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           ++ +LI GFC  GK  EA R+F+EM    V PNVVT+N LI+   + G       L E M
Sbjct: 279 SYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVM 338

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           ++ GI  ++LTYN+LI G C  G    A  L   +      P+   Y+ LI G C     
Sbjct: 339 IQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKV 398

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E A +LY  M++ G RP+   +  L++   Q      A ++   M    +  D  I    
Sbjct: 399 EEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIF 458

Query: 515 YSGLHHCGKDELAMKLFRKME 535
            +GL   G    AM+LF K++
Sbjct: 459 LNGLCKNGCLFEAMELFNKLK 479



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/304 (29%), Positives = 155/304 (50%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K+  A   F +M + G  P + + N  +  L    +V  A    + M +  I PN+ T N
Sbjct: 292 KWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYN 351

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  FC +G +  A E+F +M S G  P V  Y  LI+G+C    +  AMK  N M + 
Sbjct: 352 SLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQV 411

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G +P+V T+  L+ G  + GK+ +A ++F  MK   +  ++  Y   +NG  + G     
Sbjct: 412 GKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEA 471

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L+ ++    IK+DI  +N LI GLCK GK + A  L + L +  L P+  TY+ +I  
Sbjct: 472 MELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHE 531

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C      +A  L++ M ++GC P+K  +  L+  F +++  ++  E+L  M+++ ++ D
Sbjct: 532 FCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 591

Query: 508 SIIL 511
             IL
Sbjct: 592 VNIL 595



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 6/231 (2%)

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +F +LM  +   P + +F  L+ G  K     +   ++++M+ + +SP+  T N L+N
Sbjct: 80  AFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLN 139

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
               V     G ++   +LR G   DI+TY  LI GLC E +  KAA L   + K    P
Sbjct: 140 CLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTP 199

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGC------RPNKHIFEMLMSTFCQNEDFD 490
           NA TY  L+ G C   N   A +L++ M+          +P    + +++   C++   D
Sbjct: 200 NAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRED 259

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A ++  EM  + M P  I  + L  G    GK E A +LF +M  +G+ P
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQP 310



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 121/260 (46%), Gaps = 9/260 (3%)

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
            IV ++LT N       S++ G       +   +LF S+    + C+   + + +L   Y
Sbjct: 342 GIVPNLLTYN-------SLIEGFCLVGDLNSARELFVSM--PSKGCEPDVICYTVLINGY 392

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
               K   A   +  M   G  P +++    L+ L    +V  A   +  M+   I  ++
Sbjct: 393 CKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDL 452

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           Y   + ++  CK G +  A+E+F  ++S      +  +N LI G C  G L  A +    
Sbjct: 453 YIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEK 512

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           + +  +QP+V+T+N +I  FC+ G++ +AN +F +M+    +P+ +TY TLI G+ +   
Sbjct: 513 LPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKK 572

Query: 384 SEMGASLYEEMLRNGIKVDI 403
            E    L   M++  + +D+
Sbjct: 573 LEKVVELLHMMVQRDVSLDV 592


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 161/326 (49%), Gaps = 3/326 (0%)

Query: 219 MRD---YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           +RD   +G  P + S N  L  L  ++R        +EM R    PN+ T N ++   C+
Sbjct: 215 LRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCR 274

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+ ER  EV   M   G  P +  Y T+I G C +G L +A +  N M   G++PNV+ 
Sbjct: 275 NGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVC 334

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NTL+ G C   +  E   + +EM   +   + VT+N L++ + Q G  +    L E+ML
Sbjct: 335 YNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML 394

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G   D++TY  +I G CKEG   +A  L+K +      PN  +Y+ ++ G C  +   
Sbjct: 395 ERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWV 454

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   MI+ GC  N   F  L++  C+    ++A E+L +ML    +PD I  S + 
Sbjct: 455 DAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI 514

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   GK + A++L   M  +G+ P
Sbjct: 515 DGLGKAGKTDEALELLNVMVNKGMSP 540



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 148/320 (46%), Gaps = 35/320 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  YG  P +   N  L  L  +ER +       EM       +  T N+++  FC+ G
Sbjct: 322 RMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNG 381

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV---- 333
           +++R +E+ + M   G +P V TY T+I+G C +GL+  A+     M   G +PN     
Sbjct: 382 LVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYT 441

Query: 334 -------------------------------ITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                          ITFNTLI   CKKG + +A  +  +M   
Sbjct: 442 IVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP++++Y+T+I+G G+ G ++    L   M+  G+  + + Y+++   L +EG+  K 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  ++   ++  +A  Y+A+I+  C R  +ERA +    M+ SGC PN+  + +L+  
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 483 FCQNEDFDRAAEVLLEMLEK 502
                    A E+L E+  K
Sbjct: 622 LASEGFVKEAQEMLTELCSK 641



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 148/320 (46%), Gaps = 7/320 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P++ +       L    R+  AL    EM R   +P     ++++ A C+ G    
Sbjct: 123 YTYFPVVRA-------LCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRS 175

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV V +++ + G    V   N +++  C++G +  A+     +   G +P+V+++N ++ 
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 235

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +      +  EM      PN+VT+NTLI+   + G  E    +  +M+ +G   
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 295

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  Y  +I G+CKEG  + A  ++  +    L PN   Y+ L+ G C  +  E   +L 
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M    C  +   F +L+  FCQN   DR  E+L +MLE+   PD I  + + +G    
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A+ L + M   G  P
Sbjct: 416 GLIDEAVMLLKSMTACGCKP 435



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 127/293 (43%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   V+ A C  G I  A+ V   M   G  P    Y+ ++   C  G    A+
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAV 177

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    +   G   +V   N ++   C +G + EA  +  ++ +    P+VV+YN ++ G 
Sbjct: 178 RVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGL 237

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L EEM+R     +I+T+N LI  LC+ G  ++   ++  + ++   P+ 
Sbjct: 238 CMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDI 297

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y+ +I G C   + E A ++   M   G +PN   +  L+   C  E ++   E+L E
Sbjct: 298 RMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAE 357

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           M +K    D +  + L       G  +  ++L  +M  RG +P        IN
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVIN 410



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 117/241 (48%), Gaps = 3/241 (1%)

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN +++G+C  G L  A   + L     + PN  T+  ++   C +G++ +A  +  EM 
Sbjct: 93  YNAMVAGYCRAGQLESA---RRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
               +P    Y+ ++    + G       + E++   G  +D+   N ++  +C +G   
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A +L++DL      P+  +Y+A++ G C+ K      +L + M+R  C PN   F  L+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           S  C+N  F+R  EVL +M+E    PD  + + +  G+   G  E+A ++  +M   GL 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 541 P 541
           P
Sbjct: 330 P 330



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 128/280 (45%), Gaps = 12/280 (4%)

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  +C+ G +E A  +     ++   P+  TY  ++   C +G ++ A+   + M +
Sbjct: 94  NAMVAGYCRAGQLESARRLAA---AVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G  P    ++ ++   C+ G    A R+  ++ A   + +V   N ++N     G+ + 
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  ++   G + D+++YNA++ GLC   +      L++++ + +  PN  T++ LI+
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C     ER  ++   M+  GC P+  ++  ++   C+    + A E+L  M    + P
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 330

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           + +  + L  GL  C  +       R  E   LL + FDK
Sbjct: 331 NVVCYNTLLKGL--CSAE-------RWEETEELLAEMFDK 361


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 176/350 (50%), Gaps = 16/350 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A      M   GF+P   + +K ++ L ++ +V+ A   ++EM+   ++P+VYT  
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYT 327

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK G+IE+A   F  M S+G   +V TY  L+  +     L  A    N M   
Sbjct: 328 ILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDA 387

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN----------------VSPNVVTY 371
           G  PN IT++ L+ G CK G++ +A  +++++  T+                ++PNVVTY
Sbjct: 388 GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTY 447

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+G  +         L + ML NG + + + Y+ALI G CK GK   A  +   + K
Sbjct: 448 GALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSK 507

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              +P   TY++LI      +  + A ++   M+ S C PN   +  ++   C+  +  +
Sbjct: 508 CGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQK 567

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A ++L  M EK  +P+ +  + L  GL   GK +L+++LF +M  +G  P
Sbjct: 568 ALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP 617



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 176/410 (42%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + + +  A     +M D G  P   + N F+ S+   E +    
Sbjct: 173 CNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPD 232

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
              +A   Y+EM  +    N           C +G  + A ++ K M   GF+P  +TY+
Sbjct: 233 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYS 292

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C    +  A      M+  G+ P+V T+  LI  FCK G + +A   F EM++ 
Sbjct: 293 KVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSI 352

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             S NVVTY  L++ Y +       + ++  M+  G   + +TY+AL+ GLCK G+ +KA
Sbjct: 353 GCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKA 412

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                  +S+ PN  TY ALI G C       A +L  +M+ 
Sbjct: 413 CEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLS 472

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL----------------------------- 497
           +GC PN  I++ L+  FC+    D A EV L                             
Sbjct: 473 NGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 532

Query: 498 ------EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 +M+E    P+ +  + +  GL   G+ + A+KL   ME +G  P
Sbjct: 533 AMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSP 582



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 168/345 (48%), Gaps = 7/345 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +       +L D++L +   C+ + +++D L   +    K  NA + F +M 
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSN--GCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMS 506

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+LP + +    + ++    R+D+A+    +M  +  +PNV T   ++   C++G  +
Sbjct: 507 KCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQ 566

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+++   ME  G  P+V TY  LI G    G + L+++    M   G  PN +T+  LI
Sbjct: 567 KALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLI 626

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              C  G L EA+ + SEMK T     +  Y +++ G+ +   + +G  L EE+  +G  
Sbjct: 627 NHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLG--LLEELESHGTV 684

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST---YSALITGQCVRKNSERA 457
                Y  LI    K G+ ++A  L K++ + S   N ++   Y++LI   C+    E+A
Sbjct: 685 PIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKA 744

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           F+LY  + R G  P   +F  L+    +   ++ A ++   + ++
Sbjct: 745 FELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDE 789



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 145/320 (45%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  ++        A   F +MR  G    + +    L + L ++++  A   +  M 
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMI 385

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEV----------------FKNMESMGFIPSVT 299
                PN  T + ++   CK G I++A EV                F+   +    P+V 
Sbjct: 386 DAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVV 445

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  LI G C    +  A +  + M  NG +PN I ++ LI GFCK GK+  A  +F  M
Sbjct: 446 TYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRM 505

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P V TY +LI+   +    ++   +  +M+ +    +++TY A+I GLC+ G+ 
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGEC 565

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +KA  L+  +++    PN  TY+ALI G       + + QL+  M   GC PN   + +L
Sbjct: 566 QKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVL 625

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           ++  C     D A  +L EM
Sbjct: 626 INHCCAAGLLDEAHSLLSEM 645



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 154/321 (47%), Gaps = 7/321 (2%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +  L  + +V  A      M  N   PN    + ++  FCK+G I+ A EV
Sbjct: 442 PNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEV 501

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G++P+V TY +LI        L LAMK  + M ++   PNV+T+  +I G C+
Sbjct: 502 FLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCR 561

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  +A ++ S M+    SPNVVTY  LI+G G+ G  ++   L+ +M   G   + +T
Sbjct: 562 IGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVT 621

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C  G   +A  L+ ++ +         Y +++ G    K    +  L + + 
Sbjct: 622 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQG--FSKKFIASLGLLEELE 679

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH--CGK 523
             G  P   ++ +L+  F +    + A E+  EM+E   + + I   ++Y+ L    C  
Sbjct: 680 SHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLN-ITSKDMYTSLIQALCLA 738

Query: 524 DEL--AMKLFRKMEIRGLLPK 542
            +L  A +L+ ++  +G++P+
Sbjct: 739 SQLEKAFELYSEITRKGVVPE 759



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 139/344 (40%), Gaps = 49/344 (14%)

Query: 202 TYAHRKKFRNATDTFC-----QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           T A R   R A  +       +++D+G+ P   + N  +  L  + ++D+     KEM  
Sbjct: 9   TAALRSSLRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE 68

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           +    + +T+     A CK G   R  +    +E   F         +ISG     L   
Sbjct: 69  SGFCMDKFTVGCFAQALCKEG---RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDE 125

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+ F + M  N   PNV+T+ TL+ GF KK +L    RI + M     +PN   +N+L++
Sbjct: 126 AISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVH 185

Query: 377 GY--------------------------------GQVGNSE---------MGASLYEEML 395
            Y                                G +   E         +   +YEEML
Sbjct: 186 SYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEML 245

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +   ++ +        LC  GK   A  ++K +     VP+ STYS +IT  C     E
Sbjct: 246 ASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVE 305

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +AF L++ M   G  P+ + + +L+ +FC+    ++A     EM
Sbjct: 306 KAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 349


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 178/380 (46%), Gaps = 70/380 (18%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L SL+ S+     L   ++M    I+PN  T N++++ FC+LG+I  A  V   +  
Sbjct: 72  NKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILK 131

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK--- 348
           MG+ P + T NT I G C KG +  A+ F + +   G   + +++ TLI G CK G+   
Sbjct: 132 MGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRA 191

Query: 349 --------------------------------LHEANRIFSEMKATNVSPNVVTYNTLIN 376
                                           +++A  ++SEM A  +SP+VVTY+ LI 
Sbjct: 192 ALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIR 251

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-----AYLVKDLD- 430
           G+  VG  +    L+ +M+   IK D+ T+N L+ G CKEG+ KKA       +++D+  
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311

Query: 431 -----------------------------KNSLVPNASTYSALITGQCVRKNSERAFQLY 461
                                        K  + PN  TY +L+ G C+ K   +A +++
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            +M + G   N H + ++++ FC+ +  D+A ++ +EM  K + PD +  + L  GL   
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A +L  +M  RG  P
Sbjct: 432 GKISYAFQLVNEMHDRGQPP 451



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 152/306 (49%), Gaps = 12/306 (3%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  +   + V+ A   Y EM   RISP+V T + ++  F  +G ++ A+++F  M  
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMIL 271

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P V T+N L+ G C +G L  A    ++M    I+PNV TFNTL+ GFCK  K+ E
Sbjct: 272 ENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKE 331

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F+ M    + PNVVTY +L++GY  V        ++  M + G+  ++ +YN +I 
Sbjct: 332 GKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMIN 391

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK  K  KA  L  ++    ++P+  TY++LI G C       AFQL   M   G  P
Sbjct: 392 GFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPP 451

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  +++             +L ++ ++ + P+    + L  GL   GK E A K+F
Sbjct: 452 NIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499

Query: 532 RKMEIR 537
             + ++
Sbjct: 500 EDLLVK 505



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/316 (27%), Positives = 158/316 (50%), Gaps = 12/316 (3%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++   + ++++ +    +  K   +A D + +M      P + + +  +       ++  
Sbjct: 202 KLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKD 261

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  + +M    I P+VYT N+++  FCK G +++A  V   M      P+V+T+NTL+ 
Sbjct: 262 AIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVD 321

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +        +M K GI+PNV+T+ +L+ G+C   ++++A +IF+ M    V+ 
Sbjct: 322 GFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTA 381

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV +YN +ING+ ++   +    L+ EM    I  D++TYN+LI GLCK GK   A  LV
Sbjct: 382 NVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLV 441

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN  TY++++              L   +   G +PN H   +L+   CQ+
Sbjct: 442 NEMHDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQS 489

Query: 487 EDFDRAAEVLLEMLEK 502
              + A +V  ++L K
Sbjct: 490 GKLEAARKVFEDLLVK 505



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 143/307 (46%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +S+   S  VD A+  +  +     +   +  N ++ +  K       + + + ME  G 
Sbjct: 40  ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+  T+N LI+  C  GL+  A      + K G +P++IT NT I GFC KG++H+A  
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALN 159

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
              ++ A     + V+Y TLING  +VG +     L   +    ++++ + YN +I G+ 
Sbjct: 160 FHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMS 219

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K+     A  L  ++    + P+  TYSALI G  +    + A  L+  MI    +P+ +
Sbjct: 220 KDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVY 279

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            F +L+  FC+     +A  VL  M+ + + P+    + L  G     K +    +F  M
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 535 EIRGLLP 541
             +G+ P
Sbjct: 340 MKQGIKP 346



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 138/279 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +    +  N    N V+    K   +  A +++  M +    P V TY+ LI 
Sbjct: 192 ALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIR 251

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G L  A+   N M    I+P+V TFN L+ GFCK+G+L +A  +   M   ++ P
Sbjct: 252 GFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKP 311

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV T+NTL++G+ +    + G +++  M++ GIK +++TY +L+ G C   +  KA  + 
Sbjct: 312 NVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIF 371

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  +  N  +Y+ +I G C  K  ++A +L+  M      P+   +  L+   C++
Sbjct: 372 NTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKS 431

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
                A +++ EM ++   P+ I  + + + L    KD+
Sbjct: 432 GKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQ 470


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 165/330 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M   G  P I + NK +  L     V  +   + ++ +  + PN++T N+ + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C+ G I+ A  + +++ S G  P V +YNTLI G C    L  A  + + M  +G++P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N  T+NT+I GFCK G +  A++I  +       P+  TY++LING    G+     +++
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            E +  G K  I+ YN L+ GL K+G   +A  L+KD+ ++   P+  TY+ ++ G C  
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  +    I  GC P+   F  L+  +C+  + D+A E+L  ML   + PD I  
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITY 499

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +GL    K +  +  F+ M  +G  P
Sbjct: 500 NTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 19/434 (4%)

Query: 110 KHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL 167
           KHV  +++ Q D + +L+ F  V+T      TLET+  ++  L  + KF++ E +L  + 
Sbjct: 8   KHVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR 67

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
                ++ SK+ +              V+  + + Y  + K + A + F +M  Y   P 
Sbjct: 68  K----NVDSKMLEG-------------VYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPS 110

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           ++S N  ++ L++      A   Y  M+   I P+VYT  + M +FC  G    A+ +  
Sbjct: 111 VQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLN 170

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           NM   G   +  +Y  +ISG   +     A    + M K GI P+++TFN LI   CKKG
Sbjct: 171 NMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKG 230

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            + E+ ++FS++    V PN+ T+N  I G  + G  +  A L E ++  G+  D+++YN
Sbjct: 231 NVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYN 290

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G CK  K  +A   +  +  + + PN  TY+ +I G C     + A ++ +  +  
Sbjct: 291 TLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK 350

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P++  +  L++  C + D +RA  V  E +EK      I+ + L  GL   G    A
Sbjct: 351 GFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQA 410

Query: 528 MKLFRKMEIRGLLP 541
           ++L + M   G  P
Sbjct: 411 LQLMKDMMEHGCSP 424



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 166/314 (52%), Gaps = 2/314 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + S N  +       ++  A  +  +M  + + PN +T N +++ FCK G+++ A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIF 341
            ++ ++    GFIP   TY++LI+G CN G ++ AM  F   MEK G + ++I +NTL+ 
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK-GFKHSIILYNTLVK 399

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G  K+G + +A ++  +M     SP++ TYN ++NG  ++G       +  + +  G   
Sbjct: 400 GLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIP 459

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI T+N LI G CK+    KA  ++  +  + + P+  TY+ L+ G C  +  +     +
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K+M+  GC PN   + +L+ +FC++     A E+  EM  + + PD + L  L  GL   
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579

Query: 522 GKDELAMKLFRKME 535
           G+ + A +LF  +E
Sbjct: 580 GELDKAYELFVTIE 593



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 170/364 (46%), Gaps = 2/364 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD +L    +C    L F+ L      +   + +   F ++   G  P + + N F+  
Sbjct: 203 LFDEML-KQGIC-PDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L     +D A    + +    ++P+V + N ++  FCK   +  A      M + G  P+
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             TYNT+I+G C  G++  A K        G  P+  T+++LI G C  G ++ A  +F 
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           E        +++ YNTL+ G  + G       L ++M+ +G   DI TYN ++ GLCK G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               A  ++ D      +P+  T++ LI G C ++N ++A ++  +M+  G  P+   + 
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYN 500

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++  C+    D   +    MLEK   P+ I  + L        K   AM+LF++M+ R
Sbjct: 501 TLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTR 560

Query: 538 GLLP 541
           GL P
Sbjct: 561 GLTP 564



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 150/296 (50%), Gaps = 1/296 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +  + GF   I   N  +  L     V  AL   K+M  +  SP+++T N+V++
Sbjct: 375 AMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVN 434

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G +  A  +  +  + G IP + T+NTLI G+C +  +  A++  + M  +GI P
Sbjct: 435 GLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITP 494

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +VIT+NTL+ G CK  KL      F  M     +PN++TYN LI  + +         L+
Sbjct: 495 DVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELF 554

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCV 450
           +EM   G+  DI+T   LI GLC  G+  KA  L   ++K      + + ++ +I   C 
Sbjct: 555 KEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCX 614

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           + N   A +L+  M  S C P+ + + +++ ++C+  + D A   LLE + K + P
Sbjct: 615 KLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP 670



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 180/382 (47%), Gaps = 5/382 (1%)

Query: 176 SKLFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           SKL ++  Y ++M +S    +   ++ +   +      +NA          GF+P   + 
Sbjct: 300 SKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTY 359

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  ++ L +   ++ A+  + E        ++   N ++    K G++ +A+++ K+M  
Sbjct: 360 SSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME 419

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P + TYN +++G C  G LS A    N     G  P++ TFNTLI G+CK+  + +
Sbjct: 420 HGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDK 479

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  I   M +  ++P+V+TYNTL+NG  +    +     ++ ML  G   +I+TYN LI 
Sbjct: 480 AIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIE 539

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCR 470
             CK+ K  +A  L K++    L P+  T   LI G C     ++A++L+ ++ +     
Sbjct: 540 SFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFS 599

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +  IF ++++ FC   +   A ++  +M     APD+     +       G  +LA   
Sbjct: 600 YSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTF 659

Query: 531 FRKMEIRGLLPKGFDKLRTINC 552
             +   +GL+P      + +NC
Sbjct: 660 LLENISKGLVPSFTTCGKVLNC 681



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 164/352 (46%), Gaps = 6/352 (1%)

Query: 211 NATDTFCQMR-DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN---RISPNVYTL 266
           NA   F Q++ + GF   +E+    +  L    + +       EMR+N   ++   VY  
Sbjct: 22  NALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYI- 80

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
             +M  + + G ++ AV VF+ M+     PSV +YN +++     G  S A K    M+ 
Sbjct: 81  -GIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI P+V T    +  FC  G+   A R+ + M       N V+Y  +I+G+ +      
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L++EML+ GI  DILT+N LI  LCK+G  +++  L   + K  + PN  T++  I 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C +   + A +L +S++  G  P+   +  L+  FC++     A   L +M+   + P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           +    + + +G    G  + A K+ R    +G +P  F     IN    +G+
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGD 371



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 42/326 (12%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S ++++ L K  + +     A      M ++G  P I + N  ++ L     +  A G  
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN- 310
            +       P+++T N ++  +CK   +++A+E+   M S G  P V TYNTL++G C  
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           + L ++   FK ++EK G  PN+IT+N LI  FCK  K+ EA  +F EMK   ++P++VT
Sbjct: 510 RKLDNVVDTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568

Query: 371 ------------------------------------YNTLINGYGQVGNSEMGASLYEEM 394
                                               +N +IN +    N  M   L+ +M
Sbjct: 569 LCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
             +    D  TY  +I   CK G    A  +L++++ K  LVP+ +T   ++   CV   
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISK-GLVPSFTTCGKVLNCLCVTHR 687

Query: 454 SERAFQLYKSMIRSGCRPNK--HIFE 477
              A  +   M+++G  P +   IFE
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFE 713



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 1/249 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F+ L   Y  ++    A +    M  +G  P + + N  L+ L  + ++D  +
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +K M     +PN+ T N+++ +FCK   +  A+E+FK M++ G  P + T  TLI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 309 CNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C+ G L  A +    +EK      +   FN +I  FC K  +  A ++F +M  ++ +P+
Sbjct: 577 CSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPD 636

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             TY  +I+ Y + GN ++  +   E +  G+     T   ++  LC   +  +A  ++ 
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIIN 696

Query: 428 DLDKNSLVP 436
            + +N +VP
Sbjct: 697 LMVQNGIVP 705



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 103/268 (38%), Gaps = 63/268 (23%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ +H I   ++T N       ++L G+  +   D     F ++L   + C  + + +++
Sbjct: 486 TMLSHGITPDVITYN-------TLLNGLCKARKLDNVVDTFKAMLE--KGCTPNIITYNI 536

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLP-IIESC-------------------------- 231
           L +++   +K   A + F +M+  G  P I+  C                          
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 232 ---------NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
                    N  +++      V +A   + +M  +  +P+ YT  +++ ++CK G I+ A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
                   S G +PS TT   +++  C    LS A+   NLM +NGI P           
Sbjct: 657 HTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVP----------- 705

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVT 370
                   E N IF   K    +P +V 
Sbjct: 706 -------EEVNSIFEADKKEVAAPKIVV 726


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 172/368 (46%), Gaps = 22/368 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + K +  A     +M   G  P     N F+ S+   E++    
Sbjct: 342 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 401

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D+A   Y EM       N   +       C +G  ++A ++ K M   GF+P  +TY+
Sbjct: 402 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 461

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C+   +  A      M+  G+ P+V T+  LI  FCK G + +A  +F EM++ 
Sbjct: 462 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 521

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP VVTY  LI+ Y +         ++  M+  G + + +TY AL+ GLCK G   KA
Sbjct: 522 GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKA 581

Query: 423 AYLVKDL----------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +   L                D+++L PN  TY AL+ G C     + A +L  +M+ 
Sbjct: 582 FEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLS 641

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN  +++ L+  FC+    D A EV L+M +    P     + L   +   G+ +L
Sbjct: 642 SGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDL 701

Query: 527 AMKLFRKM 534
           AMK+  +M
Sbjct: 702 AMKVLSQM 709



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 168/333 (50%), Gaps = 16/333 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A     +M   GF+P   + +K ++ L  + +V+ A   ++EM+   ++P+VYT  
Sbjct: 437 KFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYT 496

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK G+IE+A  +F+ M S+G  P+V TY  LI  +     +  A    + M   
Sbjct: 497 ILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDA 556

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN----------------VSPNVVTY 371
           G +PN +T+  L+ G CK G + +A  +++++  T+                ++PNVVTY
Sbjct: 557 GCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTY 616

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L++G  +    +    L + ML +G + + + Y+ALI G CK GK   A  +   + K
Sbjct: 617 GALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTK 676

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              +P+  TY++LI         + A ++   M++  C PN   +  ++   C+  + ++
Sbjct: 677 CGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEK 736

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           A ++L  M EK  +P+ +  + L  GL    +D
Sbjct: 737 ALKLLSLMEEKGCSPNVVTYTALIDGLGQSWQD 769



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 147/324 (45%), Gaps = 16/324 (4%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
           F   L    + D A    KEM R    P+  T + V+   C    +E+A  +F+ M+ +G
Sbjct: 428 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 487

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P V TY  LI   C  GL+  A      M   G  P V+T+  LI  + K  ++ +AN
Sbjct: 488 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 547

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML----------------RN 397
            IF  M      PN VTY  L++G  + GN      +Y +++                R+
Sbjct: 548 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 607

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  +++TY AL+ GLCK  K   A  L+  +  +   PN   Y ALI G C     + A
Sbjct: 608 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 667

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++  M + G  P+ H +  L+    ++   D A +VL +ML+    P+ +  + +  G
Sbjct: 668 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 727

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ E A+KL   ME +G  P
Sbjct: 728 LCRIGESEKALKLLSLMEEKGCSP 751



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 113/479 (23%), Positives = 186/479 (38%), Gaps = 62/479 (12%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           LT   V  VL  V+    L   FF W +     S T   +  +   L  + + + +E +L
Sbjct: 103 LTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYDALADALGFDGRARDAERLL 162

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
           R I + D   L   L                  ++L +       +  A +   +++D+G
Sbjct: 163 REIGEEDREVLGRLL------------------NVLVRRCCRGGMWNEALEELGRLKDFG 204

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG------ 277
           + P   + N  +  L  + +VD+     KEM  +    + +T+    HA CK G      
Sbjct: 205 YRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADAL 264

Query: 278 -IIER-------------------------AVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +IER                         A+     M     IP+V TY TL+SG   K
Sbjct: 265 DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKK 324

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             L    +  N+M   G  PN   FN+L+  +C +     A ++ + M      P  V Y
Sbjct: 325 KQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVY 384

Query: 372 NTLINGYGQVGNSE---------MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           N  I   G +   E         +   +Y EML     ++ +        LC  GK  KA
Sbjct: 385 NIFI---GSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K++ +   VP+ STYS +IT  C     E+AF L++ M   G  P+ + + +L+ +
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDS 501

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           FC+    ++A  +  EM     +P  +  + L        +   A  +F +M   G  P
Sbjct: 502 FCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 560



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 127/268 (47%), Gaps = 16/268 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  ++        A   F +MR  G  P + +    + + L +++V  A   +  M 
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM----------------ESMGFIPSVT 299
                PN  T   ++   CK G I +A EV+  +                +     P+V 
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 614

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  L+ G C    +  A +  + M  +G +PN I ++ LI GFCK GK+  A  +F +M
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P+V TY +LI+   + G  ++   +  +ML++    +++TY A+I GLC+ G++
Sbjct: 675 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 734

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITG 447
           +KA  L+  +++    PN  TY+ALI G
Sbjct: 735 EKALKLLSLMEEKGCSPNVVTYTALIDG 762



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 139/313 (44%), Gaps = 12/313 (3%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK---LGIIERAVEVFK 287
           C   +S L+++   D A+ F   MR N   PNV T   ++  F K   LG  +R + +  
Sbjct: 279 CTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINM-- 336

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M + G  P+ + +N+L+  +CN+   + A K  N M   G  P  + +N  I   C + 
Sbjct: 337 -MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQE 395

Query: 348 KLHE------ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           KL        A +I+ EM A N   N V           VG  +    L +EM+R G   
Sbjct: 396 KLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVP 455

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY+ +I  LC   K +KA  L +++    + P+  TY+ LI   C     E+A  L+
Sbjct: 456 DTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLF 515

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M   GC P    +  L+  + + +   +A ++   M++    P+ +    L  GL   
Sbjct: 516 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 575

Query: 522 GKDELAMKLFRKM 534
           G    A +++ K+
Sbjct: 576 GNISKAFEVYAKL 588



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 120/248 (48%), Gaps = 10/248 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S T+ T++ ++H   K ++   +  I   ++D+     P+ +    L    +C +  +  
Sbjct: 524 SPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC--RPNDVTYGALVD-GLCKAGNI-- 578

Query: 197 DLLFKTYAHRKKFRNATDTF----CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              F+ YA      ++ D+     C+ R +   P + +    +  L  + +VD A     
Sbjct: 579 SKAFEVYAKLIGTSDSADSDFYFPCEDR-HTLAPNVVTYGALVDGLCKAHKVDHAHELLD 637

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            M  +   PN    + ++  FCK G I+ A EVF  M   G++PSV TY +LI      G
Sbjct: 638 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 697

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L LAMK  + M K+   PNV+T+  +I G C+ G+  +A ++ S M+    SPNVVTY 
Sbjct: 698 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 757

Query: 373 TLINGYGQ 380
            LI+G GQ
Sbjct: 758 ALIDGLGQ 765



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 16/241 (6%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L   Y   K+   A D F +M D G  P   +    +  L  +  +  A 
Sbjct: 523 CSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAF 582

Query: 249 GFYKEM----------------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             Y ++                 R+ ++PNV T   ++   CK   ++ A E+   M S 
Sbjct: 583 EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSS 642

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P+   Y+ LI G C  G +  A +    M K G  P+V T+ +LI    K G+L  A
Sbjct: 643 GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLA 702

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++ S+M   + +PNVVTY  +I+G  ++G SE    L   M   G   +++TY ALI G
Sbjct: 703 MKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDG 762

Query: 413 L 413
           L
Sbjct: 763 L 763



 Score = 91.7 bits (226), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/349 (21%), Positives = 136/349 (38%), Gaps = 60/349 (17%)

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           LN+++   C+ G+   A+E    ++  G+ PS  TYN L+    + G + L  + +  M 
Sbjct: 177 LNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMS 236

Query: 326 KNGIQPNVITFNTLIFGFCKKGK--------------------------------LHEAN 353
           ++G   +  T        CK+G+                                  EA 
Sbjct: 237 ESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAM 296

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
                M+  +  PNVVTY TL++G+ +         +   M+  G   +   +N+L+   
Sbjct: 297 SFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSY 356

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN------SERAFQLYKSMIRS 467
           C E     A  L+  +      P    Y+  I   C ++        + A ++Y  M+ +
Sbjct: 357 CNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAA 416

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
            C  NK          C    FD+A +++ EM+ K   PD+   S++ + L H  K E A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476

Query: 528 MKLFRKMEIRGLLPKG----------------------FDKLRTINCAP 554
             LF++M++ G+ P                        F+++R++ C+P
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSP 525


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 180/354 (50%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++   + ++++ +  +    K    A D + +M   G  P + + N  +S      ++  
Sbjct: 206 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   + +M    I+PNVYT N+++  FCK   ++ A  V   M   G  P V TYN+L+ 
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            +C    ++ A    N + + G+ PN+ +++ +I GFCK  K+ EA  +F EM   N+ P
Sbjct: 326 RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP 385

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYN+LI+G  ++G       L +EM   G+  D +TYN+++  LCK  +  KA  L+
Sbjct: 386 DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALL 445

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + P+  TY+ L+ G C     E A  +++ ++  G   + +I+  ++  FC +
Sbjct: 446 TKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSH 505

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             FD + ++L +M E    P+++    +   L    +++ A KL R+M  RGL 
Sbjct: 506 GLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 155/279 (55%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PNV TL  ++   C  G I +A++    + ++GF  +  +Y TLI+G C  G  S A++ 
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              ++   +QPNV+ +NT+I   CK   ++EA  ++SEM +  +SP+VVTYN LI+G+  
Sbjct: 200 LRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCI 259

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           VG  +    L+ +M+   I  ++ T+N L+ G CKE + K+A  ++  + K  + P+  T
Sbjct: 260 VGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFT 319

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y++L+   C+ K   +A  ++ ++ + G  PN H + +++  FC+ +  D A  +  EM 
Sbjct: 320 YNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMH 379

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              + PD +  + L  GL   GK   A+KL  +M  RG+
Sbjct: 380 CNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 418



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 150/294 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +    + PNV   N ++ + CK+ ++  A +++  M S G  P V TYN LIS
Sbjct: 196 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALIS 255

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G +  A    N M    I PNV TFN L+ GFCK+ +L EA  + + M    + P
Sbjct: 256 GFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKP 315

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V TYN+L++ Y  V        ++  + + G+  +I +Y+ +I G CK  K  +A  L 
Sbjct: 316 DVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLF 375

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++  N+++P+  TY++LI G C       A +L   M   G   +K  +  ++   C+N
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              D+A  +L +M ++ + PD    + L  GL   G+ E A  +F  + ++G +
Sbjct: 436 HQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYI 489



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 163/318 (51%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + S+   + V+ A   Y EM    ISP+V T N ++  FC +G ++ A ++
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDL 269

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P+V T+N L+ G C +  L  A     +M K GI+P+V T+N+L+  +C 
Sbjct: 270 FNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCL 329

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++++A  IF+ +    V+PN+ +Y+ +I+G+ ++   +   +L++EM  N I  D++T
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN+LI GLCK GK   A  LV ++    +  +  TY++++   C     ++A  L   M 
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G +P+   +  L+   C+N   + A  V  ++L K    D  I + +  G    G  +
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509

Query: 526 LAMKLFRKMEIRGLLPKG 543
            ++ L  KME  G +P  
Sbjct: 510 ESLDLLSKMEENGCIPNA 527



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 160/316 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I    K L SL+ S      +  +++M  N I+ ++  L+++++ F +LG    +  V
Sbjct: 70  PSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSV 129

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              +  MG+ P+V T  TLI G C KG +  A++F + +   G   N +++ TLI G CK
Sbjct: 130 LAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCK 189

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+   A ++   +    V PNVV YNT+I+   +V        LY EM+  GI  D++T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YNALI G C  GK K A  L   +   ++ PN  T++ L+ G C  +  + A  +   M+
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G +P+   +  LM  +C  ++ ++A  +   + ++ + P+    S +  G     K +
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369

Query: 526 LAMKLFRKMEIRGLLP 541
            AM LF++M    ++P
Sbjct: 370 EAMNLFKEMHCNNIIP 385


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 178/410 (43%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL------LDSE 242
           C  SP +F+ L   Y        A     +M   G +P     N  + S+      L+ +
Sbjct: 327 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFD 386

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +D+A   Y EM    +  N   ++      C  G  E+A  V + M   GFIP  +TY+
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 446

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +++  CN   + LA      M++ G+  +V T+  ++  FCK G + +A + F+EM+  
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 506

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PNVVTY  LI+ Y +         L+E ML  G   +I+TY+ALI G CK G+ +KA
Sbjct: 507 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 566

Query: 423 AYL----------------VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             +                 K  D NS  PN  TY AL+ G C     E A +L  +M  
Sbjct: 567 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 626

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
            GC PN+ +++ L+   C+    D A E                                
Sbjct: 627 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 686

Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              VL +MLE   AP+ +I +E+  GL   GK + A KL + ME +G  P
Sbjct: 687 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 736



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++  ++        A   F +MR+ G  P + +    + + L +++V  A   ++ M 
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP----------------SVT 299
                PN+ T + ++   CK G +E+A ++F+ M     +P                +V 
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 599

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  L+ G C    +  A K  + M   G +PN I ++ LI G CK GKL EA  + +EM
Sbjct: 600 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                   + TY++LI+ Y +V   ++ + +  +ML N    +++ Y  +I GLCK GKT
Sbjct: 660 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  L++ +++    PN  TY+A+I G  +    E   +L + M   G  PN   + +L
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           +   C+N   D A  +L EM
Sbjct: 780 IDHCCKNGALDVAHNLLEEM 799



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/459 (22%), Positives = 190/459 (41%), Gaps = 62/459 (13%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           + FF W         T   ++ ++ ++ ++   K  E  L+ I D D      ++F   L
Sbjct: 108 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGQFL 162

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        ++L + +     F  A +   +++D+ F P   + N  + + L ++R
Sbjct: 163 -------------NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADR 209

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   ++EM    +  + +TL    ++ CK+G    A+ +   +E+  F+P    Y  
Sbjct: 210 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTK 266

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LISG C   L   AM F N M      PNV+T++TL+ G   K +L    R+ + M    
Sbjct: 267 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 326

Query: 364 VSPNVVTYNTLINGYGQVGNS--------------------------------------- 384
             P+   +N+L++ Y   G+                                        
Sbjct: 327 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFD 386

Query: 385 --EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             ++    Y EML  G+ ++ +  ++    LC  GK +KA  +++++     +P+ STYS
Sbjct: 387 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 446

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            ++   C     E AF L++ M R G   + + + +++ +FC+    ++A +   EM E 
Sbjct: 447 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 506

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              P+ +  + L        K   A +LF  M   G LP
Sbjct: 507 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 545



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 7/348 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G   S   +   KL D++  S   C+ + +V+D L        K   A +   +M 
Sbjct: 603 ALLDGFCKSHRVEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 660

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++GF   + + +  +      +R D+A     +M  N  +PNV     ++   CK+G  +
Sbjct: 661 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 720

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + ME  G  P+V TY  +I G    G +   ++    M   G+ PN +T+  LI
Sbjct: 721 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 780

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G L  A+ +  EMK T+   +   Y  +I G+ +     +G  L +E+ ++   
Sbjct: 781 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTA 838

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAF 458
             +  Y  LI  L K  + + A  L++++   S  LV  +STY++LI   C+    E AF
Sbjct: 839 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 898

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           QL+  M + G  P    F  L+    +N     A  +LL+ +   + P
Sbjct: 899 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL-LLLDFISHMVCP 945



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 4/346 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           +F+     K   +    F Q  D    P + +    L     S RV+ A      M    
Sbjct: 569 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 628

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN    + ++   CK+G ++ A EV   M   GF  ++ TY++LI  +       LA 
Sbjct: 629 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 688

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M +N   PNV+ +  +I G CK GK  EA ++   M+     PNVVTY  +I+G+
Sbjct: 689 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 748

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G +G  E    L E M   G+  + +TY  LI   CK G    A  L++++ +     + 
Sbjct: 749 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 808

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           + Y  +I G    K    +  L   + +    P   ++ +L+    + +  + A  +L E
Sbjct: 809 AGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 866

Query: 499 M--LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +      +   S   + L   L    K E A +LF +M  +G++P+
Sbjct: 867 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 912


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P I   N  +    ++  ++ AL  ++ M  NR SPNV T   ++H  CK G +ERA
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +F  M   G  P+V TY  LI G CN+G L  A +  +LME NG+ PN  TF+ LI  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+ K+ EA      +    V  N V Y +LI+G  + G  +    L ++M+  G   D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             +Y++LI GLC++ K  +A  +++D+ +  +  +  TY+ +I        SE   +++ 
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI +G  P+   + + + ++C+    + A  ++++M+++ + P+ +  + L  G  + G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A   F  M  +G  P
Sbjct: 507 LVSQAFSTFEVMVGKGWKP 525



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 156/339 (46%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y       +A   F  M   G L    +    L  LL +  V  A+  +  MR +  +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +    ++H  C+ G  E A  + +   S GF P++  YN LI G+CN G +  A+K   
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+ N   PNV T+  LI G CK GK+  A  +FS M    + PNVVTY  LI G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + +    L   M  NG+  +  T++ LI  LCK  K ++A   +  L K  +  N   Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +LI G C     + A +L + MI  G  P+ H +  L+   C+ +   +A  +L +M+EK
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +    +  + +   L      E   K+F KM   G+ P
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 140/283 (49%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ Y     +  +C+ G++  A  VF  M   G + +  TY  L+ G    G++  AM
Sbjct: 103 LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAM 162

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M  +   P+   + T++ G C+ G+  EA  +  E  +    PN+V YN LI+GY
Sbjct: 163 AVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGY 222

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G  E    ++E M  N    ++ TY  LI GLCK GK ++A  L   + +  L PN 
Sbjct: 223 CNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ALI GQC   + + AF+L   M  +G  PN   F +L+   C+ E  + A   L  
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +++K +  + ++ + L  GL   GK + A +L +KM   G +P
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%)

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +L   R C  +   +  L          R A   F  MR     P        +  L ++
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R + A    +E   N   PN+   N ++  +C  G +E A++VF+ M+     P+V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             LI G C  G +  AM   + M + G++PNV+T+  LI G C +G L  A R+   M+ 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + PN  T++ LI+   +    E        +++ G+KV+ + Y +LI GLCK GK   
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ +     VP+A +YS+LI G C +K   +A  + + M+  G + +   + +++ 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    +   ++  +M+   + PD +  +         G+ E A  +  +M  RG+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 3/263 (1%)

Query: 285 VFKNMESMGF-IPS--VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +F +MES+   +P+  + TY TLI+ +C  G +  A +    +   G+ P+   + + + 
Sbjct: 56  MFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVL 115

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+C+ G L  A R+F  M          TY  L++G    G      +++  M  +    
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D   Y  ++ GLC+ G+T++A  L+++   N   PN   Y+ALI G C     E A +++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M  + C PN   +  L+   C++   +RA  +   M+E  + P+ +  + L  G  + 
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G  + A +L   ME  GL+P  +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDW 318



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 99/261 (37%), Gaps = 41/261 (15%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +   D   +L   ++    + D+    +  L      +KK   AT     M 
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHS--YSSLIDGLCRQKKLSQATLMLEDMM 414

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G      +    +  L+     +     + +M    I+P++ T  + + ++C+ G +E
Sbjct: 415 EKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRME 474

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV------- 333
            A  +   M   G  P++ TYNTLI G+ N GL+S A     +M   G +PN        
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534

Query: 334 -------------------------------ITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                          I +  LI+G  +KG + E + + S MK  
Sbjct: 535 RLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 594

Query: 363 NVSPNVVTYNTLINGYGQVGN 383
              P+  T N +I G   V N
Sbjct: 595 GYQPS-NTINAMITGEITVTN 614


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 190/377 (50%), Gaps = 5/377 (1%)

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
           + S+++G       +L  +LFD ++    + D   ++F +L    +       A + + +
Sbjct: 328 TRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDV--VIFSVLINGCSKVGDMEKAYELYTR 385

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P +   N  L    +   ++ A G + E   + I+ NV T N+++    +LG 
Sbjct: 386 MKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLGELGK 444

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFN 337
           +  A  +++ M S G  PS+ +YN LI GHC KG +  A    K+++E+ G++PN +T+ 
Sbjct: 445 VNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILER-GLKPNAVTYT 503

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI GF KKG    A  +F +M A N++P   T+NT+ING G+ G            ++ 
Sbjct: 504 LLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQ 563

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G     +TYN++I G  KEG    A    +++ ++ + P+  TY++LI G C       A
Sbjct: 564 GFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLA 623

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +++  M   G + +   +  L+  FC+  D + A++   E+L+  + P++++ + + SG
Sbjct: 624 LEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISG 683

Query: 518 LHHCGKDELAMKLFRKM 534
             H    E A+ L ++M
Sbjct: 684 FIHLNNMEAALNLHQEM 700



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 3/381 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+L G  + +  +    LFD    +     ++ + +++L K      K   A + + +M 
Sbjct: 400 SLLEGFHEQNLLEHAYGLFDE---AVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMV 456

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + S N  +        +D A    K +    + PN  T  +++  F K G  E
Sbjct: 457 SKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSE 516

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA  VF+ M +    P+  T+NT+I+G    G +S      N   K G     IT+N++I
Sbjct: 517 RAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSII 576

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GF K+G +  A   + EM  + +SP+V+TY +LI+G  +     +   ++ +M   G+K
Sbjct: 577 DGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMK 636

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D++ Y+ALI G CK    + A+    +L    L PN   Y+++I+G     N E A  L
Sbjct: 637 LDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNL 696

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ MI++    +  ++  ++    +      A ++  EML K + PD ++ + L +GL +
Sbjct: 697 HQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSN 756

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+ E A K+ ++M+   + P
Sbjct: 757 NGQLENASKILKEMDGNNITP 777



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 225/532 (42%), Gaps = 119/532 (22%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFD--LPS-KLF 179
           +L+FF  V+  +    T++  S+++HIL+ N K  SS   L+ +L++  F    PS K+F
Sbjct: 77  ALKFFHQVERKRGFVKTVDFISLLIHILSSNSKTCSS---LQFLLNNYVFGDATPSAKVF 133

Query: 180 DSIL------YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
              L      Y +   +S   VF+ L K++    K  +A + F  M ++  +P +   N 
Sbjct: 134 VECLLECSGRYGF---ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNN 190

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER------------ 281
            L++++    V  A   Y EM    I  + YTL++VM A  K G  E             
Sbjct: 191 LLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRG 250

Query: 282 -----------------------AVEVFKNMESMGFIPSVTTYN---------------- 302
                                  A E+ K M   G++PS  TY                 
Sbjct: 251 LEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEAL 310

Query: 303 -------------------TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
                              +L+ G+C  G ++LA++  + + + G+ P+V+ F+ LI G 
Sbjct: 311 RLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGC 370

Query: 344 CKKGKLHEANRIFSEMKATNVSP----------------------------------NVV 369
            K G + +A  +++ MK   + P                                  NVV
Sbjct: 371 SKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVV 430

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN L+   G++G      +L+E+M+  GI   +++YN LILG CK+G   KA  ++K +
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  L PNA TY+ LI G   + +SERAF +++ M+ +   P  H F  +++   +    
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + L   +++     SI  + +  G    G  + A+  +R+M   G+ P
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISP 602



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 156/326 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + + LL   +  +     A   F QM      P   + N  ++ L  + RV       
Sbjct: 498 NAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKL 557

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
               +        T N ++  F K G ++ A+  ++ M   G  P V TY +LI G C  
Sbjct: 558 NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKS 617

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             + LA++  + M+  G++ +V+ ++ LI GFCK   +  A++ F+E+    ++PN V Y
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVY 677

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N++I+G+  + N E   +L++EM++N +  D+  Y ++I GL KEGK   A  L  ++  
Sbjct: 678 NSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLS 737

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             +VP+   Y+ LI G       E A ++ K M  +   P+  ++ +L++   +  +   
Sbjct: 738 KDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQE 797

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSG 517
           A  +  EML+K + PD      L +G
Sbjct: 798 AFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 152/302 (50%), Gaps = 3/302 (0%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           DSER   A   +++M    I+P  +T N V++   K G +    +   N    GF+ +  
Sbjct: 514 DSER---AFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSI 570

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYN++I G   +G +  A+     M ++GI P+VIT+ +LI G CK  K+  A  + S+M
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDM 630

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           K   +  +VV Y+ LI+G+ ++ + E  +  + E+L  G+  + + YN++I G       
Sbjct: 631 KYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNM 690

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A  L +++ KN +  +   Y+++I G         A  LY  M+     P+  ++ +L
Sbjct: 691 EAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVL 750

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           ++    N   + A+++L EM    + P  ++ + L +G    G  + A +L  +M  +GL
Sbjct: 751 INGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGL 810

Query: 540 LP 541
           +P
Sbjct: 811 VP 812



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 130/258 (50%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+ + ++ +   +       +A   + +M + G  P + +    +  L  S ++ +AL  
Sbjct: 567 STSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEM 626

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + +M+   +  +V   + ++  FCK+  +E A + F  +  +G  P+   YN++ISG  +
Sbjct: 627 HSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIH 686

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              +  A+     M KN +  ++  + ++I G  K+GKL  A  ++SEM + ++ P++V 
Sbjct: 687 LNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVM 746

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LING    G  E  + + +EM  N I   +L YN LI G  +EG  ++A  L  ++ 
Sbjct: 747 YTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEML 806

Query: 431 KNSLVPNASTYSALITGQ 448
              LVP+ +TY  L+ G+
Sbjct: 807 DKGLVPDDTTYDILVNGK 824



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 108/228 (47%), Gaps = 2/228 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  S+   L  ++   + Y     D   + +  L   +       +A+  F ++ 
Sbjct: 609 SLIDGLCKSNKIGLALEMHSDMKYKGMKLDV--VAYSALIDGFCKMHDMESASKFFTELL 666

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P     N  +S  +    ++ AL  ++EM +N++  ++     ++    K G + 
Sbjct: 667 DIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLS 726

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A++++  M S   +P +  Y  LI+G  N G L  A K    M+ N I P+V+ +N LI
Sbjct: 727 LALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILI 786

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
            G  ++G L EA R+  EM    + P+  TY+ L+NG  +V ++  G+
Sbjct: 787 AGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTLGGS 834


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 169/319 (52%), Gaps = 6/319 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII------ 279
           P I    K  +SL+        +    +M    I  ++  LN++++ FC LG +      
Sbjct: 6   PTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLNDKV 65

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +  +    ++ + GF  +  +Y TLI G C  G    AM+    ++   +QPNV+ ++T+
Sbjct: 66  KETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTI 125

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I+  CK   + +A  ++S+M    +SP+V+TYNTL+ G   VG  +    L+ +ML   I
Sbjct: 126 IYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 185

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K DI T+N L+ GLCKEG+ KKA  ++  + K S+ P+  TY++L+ G  + K   +A  
Sbjct: 186 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 245

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           ++ +M R G  P+ H + ++++  C+ +  D A  +L EM  K MAP+++  S L  GLH
Sbjct: 246 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 305

Query: 520 HCGKDELAMKLFRKMEIRG 538
             G+   A  L  +M  RG
Sbjct: 306 KSGRIFDAWDLVNEMHNRG 324



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 185/415 (44%), Gaps = 45/415 (10%)

Query: 188 MCDSSPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGF------LPIIESCNKFLSSLL 239
           M + +P +F+   +F +      F        QM   G       L I+ +C   L  + 
Sbjct: 1   MNNPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVC 60

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +++V   L F+ ++       N  +   ++   CK G    A++V +N++ +   P+V 
Sbjct: 61  LNDKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVV 120

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF------------------ 341
            Y+T+I   C   L+  A    + M    I P+VIT+NTL++                  
Sbjct: 121 MYSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQM 180

Query: 342 -----------------GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
                            G CK+G++ +A  + + M   +V P+V+TYN+L++GY  V   
Sbjct: 181 LLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQE 240

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                ++  M R G+  D+ +Y+ +I GLCK     +A  L+K++   S+ PN  TYS+L
Sbjct: 241 NKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSL 300

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G         A+ L   M   G   +   +  L+   C+N   D+A  +L ++ ++ +
Sbjct: 301 IDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGI 360

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL-LPKGFDK-LRTINCAPENG 557
            PD    + L  GL   G+ + A ++++ + I+G  L   FDK L  ++   +NG
Sbjct: 361 QPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNG 415



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 155/358 (43%), Gaps = 63/358 (17%)

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           +T A  +  RN      Q       P +   +  + SL   + V  A   Y +M   RIS
Sbjct: 99  ETRAAMQVLRNIDGLLVQ-------PNVVMYSTIIYSLCKDKLVIDAFDLYSQMLLKRIS 151

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+V T N +M+    +G ++ AV +F  M      P + T+N L+ G C +G +  A   
Sbjct: 152 PDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNV 211

Query: 321 KNLMEKNGIQPNVITFNTL-----------------------------------IFGFCK 345
             +M K  + P+VIT+N+L                                   I G CK
Sbjct: 212 LAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCK 271

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              + EA  +  EM + +++PN VTY++LI+G  + G       L  EM   G   D++T
Sbjct: 272 TKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVIT 331

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR---KNSERAFQ--- 459
           YN+L+  LCK  +  KA  L+  +    + P+  TY+ L+ G C     K+++  +Q   
Sbjct: 332 YNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILL 391

Query: 460 ---------------LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
                          L   M  +GC PN   FE+L+    +N+  D+A E+L EM+ +
Sbjct: 392 IKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIAR 449


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 171/356 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +      + +  +A D    M+  G LP   + N  +        +  A 
Sbjct: 239 CSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAA 298

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M +N + P+V+T NM+++  C  G IE A ++   ME++  +P V +YNTLI+G 
Sbjct: 299 NVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGC 358

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +S A K    M + G++PN +T N ++  +CK+GK+ +A+   ++M+ +  SP+ 
Sbjct: 359 LEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDC 418

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLINGY + GN        +EM R  +K+D +T N ++  LC+E K ++A  L+  
Sbjct: 419 VTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             K     +  +Y  LI G     N +RA +L+  M      P+   +  ++   CQ   
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            ++A   L E+LE  + PD    + +  G    G  E A +   KM      P  F
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVF 594



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 182/362 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L     +  +   A     +M +   LP + S N  ++  L+  ++  A    +EM 
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN  T N+++  +CK G ++ A      ME  GF P   TYNTLI+G+C  G + 
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M +  ++ + +T NT++   C++ KL EA ++ S  +      + V+Y TLI
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY + GN +    L++EM    I    +TYN +I GLC+ GKT++A   + +L ++ L+
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ ++ G C   + E+AFQ +  M+ +  +P+     +L+   C     ++A ++
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKL 615

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
               + K  A D++  + L + L   G+ + A  L  +ME + L P  +     I    +
Sbjct: 616 FNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTD 675

Query: 556 NG 557
           +G
Sbjct: 676 SG 677



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/353 (25%), Positives = 164/353 (46%), Gaps = 2/353 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G L+        KL + +  S +    + +  +++ K Y    K  +A++T  
Sbjct: 350 SYNTLINGCLEWSKISEAFKLLEEM--SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P   + N  ++    +  +  A     EM R  +  +  TLN ++   C+  
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A ++  +    G+     +Y TLI G+   G +  A+K  + M++  I P+ +T+N
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G C+ GK  +A    +E+  + + P+  TYNT+++GY + G+ E     + +M+ N
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             K D+ T N L+ GLC EG  +KA  L           +  TY+ LIT  C     + A
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           F L   M      P+ + +  +++    +     A E + +MLEK   P  ++
Sbjct: 648 FNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 125/319 (39%), Gaps = 58/319 (18%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  + + +T    KK   A       R  G+     S    +        VD AL  + E
Sbjct: 454 VTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDE 513

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   I P+  T N ++   C+ G  E+A+     +   G +P  TTYNT++ G+C +G 
Sbjct: 514 MKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGD 573

Query: 314 LSLAMKFKNLMEKNGIQPNV-----------------------------------ITFNT 338
           +  A +F N M +N  +P+V                                   +T+NT
Sbjct: 574 VEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNT 633

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI   CK+G+L +A  + SEM+   + P+  TYN +I      G          +ML  G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693

Query: 399 ------IKVDI-----------------LTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 +++D                  + Y+  I  LC EGK K A  +  +  +  + 
Sbjct: 694 XLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGIT 753

Query: 436 PNASTYSALITGQCVRKNS 454
            + STY  L+ G   R+ S
Sbjct: 754 VDKSTYINLMDGLIKRRKS 772


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 148/281 (52%), Gaps = 6/281 (2%)

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           YT  +++ A C  G ++ A+++ + ME   G  P+ + YN  +   C  G +  AM+   
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+    +P+V+TFNTLI G CK G+L EA ++  EM+ +  + N+VTYNTLING    G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS-LVPNASTY 441
            S     + + M       D  TYNA+I G CK G+  +A   ++++ + +   P+  TY
Sbjct: 139 RSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 442 SALITGQCVRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           S LI G C   N  +A +L + MI R  C  +   F  L+  +C+ +D DRA E+L  ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E   APD +  S +  GL  CG  +    L  KM  RG  P
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 247 ALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A+   +EM +   ++P     N  +HA CK G +  A+EV KNM+     P V T+NTLI
Sbjct: 37  AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLI 96

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G C  G L  A +  + ME++G   N++T+NTLI G    G+  EA  +   M+    +
Sbjct: 97  AGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTT 153

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEM-LRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           P+  TYN +I+G+ + G  +      EEM  R G   D  TY+ LI GLCK    +KA  
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213

Query: 425 LVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L++++  +     +   ++ L+ G C  ++ +RA +L  SM+  GC P+   +  ++   
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+  D D+   +L +M+ +   PD +  + L +GL   GK   A +L ++M   G  P  
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333

Query: 544 ------FDKLRTIN 551
                 FD L  I+
Sbjct: 334 VTYSLVFDGLCKID 347



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +L + +    + + A D   +M    G  P     N F+ +L  S +V  A+   K M+ 
Sbjct: 23  VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD 82

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               P+V T N ++   CK G ++ A +V   ME  GF  ++ TYNTLI+G  + G    
Sbjct: 83  GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVVTYNTLI 375
           A+    +M+     P+  T+N +I GFCK G++  A     EMK     SP+  TY+ LI
Sbjct: 143 AVL---VMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199

Query: 376 NGYGQVGNSEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           NG  +  N      L +EM+ R      ++ +N L+ G CK     +A  L+  + ++  
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS +I G C   + ++ F L + M+  GC+P+   + +L++  C+      A  
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  MLE    P+++  S ++ GL    K ++A  L   +  +G
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 5/325 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +P +++          K   A +    M+D    P + + N  ++ L  + R+D A    
Sbjct: 53  TPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVL 112

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM R+  + N+ T N +++     G   R+ E    M+ M   P   TYN +I G C  
Sbjct: 113 DEMERSGFAANLVTYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKS 169

Query: 312 GLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVV 369
           G +  A  F + + ++ G  P+  T++ LI G CK   L +A+ +  EM    +   +VV
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVV 229

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            +NTL++GY +  + +    L   ML +G   D++TY+ +I GLC+ G   K   L++ +
Sbjct: 230 AFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKM 289

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 P+  TY+ L+TG C       A +L K M+  GC PN   + ++    C+ +  
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349

Query: 490 DRAAEVLLEMLEKCMAPDSIILSEL 514
           D A ++L  + +K    D +    L
Sbjct: 350 DMANDLLTSIRDKGRVTDVVAFETL 374



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 6/307 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F+ L        +   A     +M   GF   + + N  ++ L  + R   A+
Sbjct: 85  CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAV 144

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
              + M     +P+  T N ++H FCK G I+RA    + M +  G  P   TY+ LI+G
Sbjct: 145 LVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILING 201

Query: 308 HCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C    L  A +  + ++ +     +V+ FNTL+ G+CK   L  A  + S M     +P
Sbjct: 202 LCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAP 261

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTY+T+I+G  + G+ + G +L E+M+  G K D++TY  L+ GLCK GK  +A  LV
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K + ++   PNA TYS +  G C     + A  L  S+   G   +   FE L+ +  + 
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV-KK 380

Query: 487 EDFDRAA 493
              DRAA
Sbjct: 381 RLLDRAA 387



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 116/239 (48%), Gaps = 2/239 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           P  ++ N  +     S  +D A GF +EM+ R   SP+ +T +++++  CK   + +A E
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213

Query: 285 VFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           + + M        SV  +NTL+ G+C    L  A +  + M ++G  P+V+T++T+I G 
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ G + +   +  +M +    P+VVTY  L+ G  + G       L + ML +G   + 
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +TY+ +  GLCK  K   A  L+  +     V +   +  L+     R     AFQ +K
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRLLDRAAFQKWK 392


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 148/281 (52%), Gaps = 6/281 (2%)

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           YT  +++ A C  G ++ A+++ + ME   G  P+ + YN  +   C  G +  AM+   
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVK 78

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+    +P+V+TFNTLI G CK G+L EA ++  EM+ +  + N+VTYNTLING    G
Sbjct: 79  NMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAG 138

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS-LVPNASTY 441
            S     + + M       D  TYNA+I G CK G+  +A   ++++ + +   P+  TY
Sbjct: 139 RSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 442 SALITGQCVRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           S LI G C   N  +A +L + MI R  C  +   F  L+  +C+ +D DRA E+L  ML
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E   APD +  S +  GL  CG  +    L  KM  RG  P
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 159/314 (50%), Gaps = 12/314 (3%)

Query: 247 ALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A+   +EM +   ++P     N  +HA CK G +  A+EV KNM+     P V T+NTLI
Sbjct: 37  AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLI 96

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G C  G L  A +  + ME++G   N++T+NTLI G    G+  EA  +   M+    +
Sbjct: 97  AGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV---MQGMTTT 153

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEM-LRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           P+  TYN +I+G+ + G  +      EEM  R G   D  TY+ LI GLCK    +KA  
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213

Query: 425 LVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L++++  +     +   ++ L+ G C  ++ +RA +L  SM+  GC P+   +  ++   
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+  D D+   +L +M+ +   PD +  + L +GL   GK   A +L ++M   G  P  
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333

Query: 544 ------FDKLRTIN 551
                 FD L  I+
Sbjct: 334 VTYSLVFDGLCKID 347



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +L + +    + + A D   +M    G  P     N F+ +L  S +V  A+   K M+ 
Sbjct: 23  VLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD 82

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               P+V T N ++   CK G ++ A +V   ME  GF  ++ TYNTLI+G  + G    
Sbjct: 83  GACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGE 142

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVVTYNTLI 375
           A+    +M+     P+  T+N +I GFCK G++  A     EMK     SP+  TY+ LI
Sbjct: 143 AVL---VMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILI 199

Query: 376 NGYGQVGNSEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           NG  +  N      L +EM+ R      ++ +N L+ G CK     +A  L+  + ++  
Sbjct: 200 NGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGC 259

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYS +I G C   + ++ F L + M+  GC+P+   + +L++  C+      A  
Sbjct: 260 APDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACR 319

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  MLE    P+++  S ++ GL    K ++A  L   +  +G
Sbjct: 320 LVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 151/325 (46%), Gaps = 5/325 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +P +++          K   A +    M+D    P + + N  ++ L  + R+D A    
Sbjct: 53  TPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVL 112

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM R+  + N+ T N +++     G   R+ E    M+ M   P   TYN +I G C  
Sbjct: 113 DEMERSGFAANLVTYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKS 169

Query: 312 GLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVV 369
           G +  A  F + + ++ G  P+  T++ LI G CK   L +A+ +  EM    +   +VV
Sbjct: 170 GEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVV 229

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            +NTL++GY +  + +    L   ML +G   D++TY+ +I GLC+ G   K   L++ +
Sbjct: 230 AFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKM 289

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 P+  TY+ L+TG C       A +L K M+  GC PN   + ++    C+ +  
Sbjct: 290 VSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKL 349

Query: 490 DRAAEVLLEMLEKCMAPDSIILSEL 514
           D A ++L  + +K    D +    L
Sbjct: 350 DMANDLLTSIRDKGRITDVVAFEAL 374



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 149/307 (48%), Gaps = 6/307 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F+ L        +   A     +M   GF   + + N  ++ L  + R   A+
Sbjct: 85  CKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAV 144

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
              + M     +P+  T N ++H FCK G I+RA    + M +  G  P   TY+ LI+G
Sbjct: 145 LVMQGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILING 201

Query: 308 HCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C    L  A +  + ++ +     +V+ FNTL+ G+CK   L  A  + S M     +P
Sbjct: 202 LCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAP 261

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTY+T+I+G  + G+ + G +L E+M+  G K D++TY  L+ GLCK GK  +A  LV
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K + ++   PNA TYS +  G C     + A  L  S+   G   +   FE L+ +  + 
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV-KK 380

Query: 487 EDFDRAA 493
              DRAA
Sbjct: 381 RLLDRAA 387



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           P  ++ N  +     S  +D A GF +EM+ R   SP+ +T +++++  CK   + +A E
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADE 213

Query: 285 VFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           + + M        SV  +NTL+ G+C    L  A +  + M ++G  P+V+T++T+I G 
Sbjct: 214 LLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGL 273

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ G + +   +  +M +    P+VVTY  L+ G  + G       L + ML +G   + 
Sbjct: 274 CRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNA 333

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +TY+ +  GLCK  K   A  L+  +     + +   + AL+     R     AFQ +K
Sbjct: 334 VTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRLLDRAAFQKWK 392


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 167/318 (52%)

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D    P + + N  +  L    +V  A  + + M      P+ +T N ++  +CK  +++
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+ K+    GF+P   TY +LI+G C +G +  A++  N  +   ++P+++ +N+L+
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++G +  A ++ +EM      P++ TYN +ING  ++GN    A +  + +  G  
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+ T+N +I G CK  K   A  LV+ +    + P+A TY++++ G C    ++   + 
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ MI  GCRPN   + +L+  FC+    + A+ V++ M +  + PD+I  + L  G   
Sbjct: 417 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCR 476

Query: 521 CGKDELAMKLFRKMEIRG 538
            G  + A  LF+K++ +G
Sbjct: 477 NGDLDGAYLLFQKLDEKG 494



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 198/425 (46%), Gaps = 21/425 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSY----RMCDSSPLVF 196
           T++ ++  L K+ K + +   LR +++     +P    +++I+  Y     + +++ L+ 
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGC--IPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 197 DLLFKTYAHRK--------------KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           D +FK +   +                  A + F + +     P +   N  +  L    
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +  AL    EM  +   P+++T N+V++  CK+G I  A  V  +    G++P V T+N
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T+I G+C +  L  A++    M   GI P+ IT+N+++ G CK GK  E N  F EM   
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN +TYN LI  + ++   E  + +   M ++G+  D +++N LI G C+ G    A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L + LD+      A T++ LI     + N + A +++  MI  G +P+ + + +L+  
Sbjct: 484 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDG 543

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+  + DRA   L EM+ K   P       + + L    +   A+ +   M   G++P+
Sbjct: 544 SCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPE 603

Query: 543 GFDKL 547
             D +
Sbjct: 604 VVDTI 608



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 164/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L +      K + A     +M + G +P   + N  +      + +  A    K+
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                  P+  T   +++  C  G +ERA+E+F   ++    P +  YN+L+ G C +GL
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  N M ++G  P++ T+N +I G CK G + +A  + ++       P+V T+NT
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +    +    L E M   GI  D +TYN+++ GLCK GK K+     +++    
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PNA TY+ LI   C     E A  +   M + G  P+   F  L+  FC+N D D A 
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY 484

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  ++ EK  +  +   + L          ++A K+F +M  +G  P
Sbjct: 485 LLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 150/330 (45%), Gaps = 36/330 (10%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGII------------------------------ 279
            + EM R  + P+V T N V+HA C+ G I                              
Sbjct: 102 LFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLC 161

Query: 280 -----ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                E AV + ++M++    P V TYNTL+ G C    +  A ++   M   G  P+  
Sbjct: 162 EGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDF 220

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+NT+I G+CK+  L EA  +  +       P+ VTY +LING    G+ E    L+ E 
Sbjct: 221 TYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEA 280

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
               +K D++ YN+L+ GLC++G    A  ++ ++ ++   P+  TY+ +I G C   N 
Sbjct: 281 QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNI 340

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A  +    I  G  P+   F  ++  +C+    D A +++  M    +APD+I  + +
Sbjct: 341 SDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSV 400

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +GL   GK +   + F +M ++G  P   
Sbjct: 401 LNGLCKAGKAKEVNETFEEMILKGCRPNAI 430



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 1/281 (0%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P     N +M A       ++A +V+  M S G  P   T+   I   C  G   +A++ 
Sbjct: 8   PAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRL 67

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              + + G     + + T++ G    G  ++A  +F EM   +V P+V T+N +++   Q
Sbjct: 68  LRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQ 127

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G+     +L  ++L+ G+ V+  T N  I GLC+ G+ ++A  LV+ +D   + P+  T
Sbjct: 128 KGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDA-YIAPDVVT 186

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G C     + A Q  + M+  GC P+   +  ++  +C+ +    A E+L + +
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            K   PD +    L +GL   G  E A++LF + + + L P
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKP 287



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 151/320 (47%), Gaps = 1/320 (0%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P   + N  + +L+++   D A   Y  M    ++P+  T  + + +FC  G    
Sbjct: 4   FGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHV 63

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ + +++   G       Y T++ G    G    A    + M +  + P+V TFN ++ 
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLH 123

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C+KG + E+  + +++    +S N  T N  I G  + G  E   +L E M    I  
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAYIAP 182

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TYN L+ GLCK+ K ++AA  ++ +     +P+  TY+ +I G C R   + A +L 
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K  I  G  P++  +  L++  C   D +RA E+  E   K + PD ++ + L  GL   
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G    A+++  +M   G  P
Sbjct: 303 GLILHALQVMNEMVEDGCHP 322


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 179/400 (44%), Gaps = 38/400 (9%)

Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLS 236
           D  L S  +  ++P       L   YA       ATD   ++R+ YG LP +  CN+ L 
Sbjct: 118 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLK 177

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L++  R D A   Y EM       + Y+  +++   C  G +E  +++ +     G IP
Sbjct: 178 LLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIP 237

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            V  YN LI G+C +G +   +     ME  G  P ++T+ +LI    KKG L +   +F
Sbjct: 238 HVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLF 297

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM+   +SPNV  YN++I+   +  ++     + ++M  +G   DI+T+N LI GLC E
Sbjct: 298 LEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 357

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------- 468
           G  +KA + +++  +  L PN  +Y+ LI G C+R     A  L   M+  G        
Sbjct: 358 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTF 417

Query: 469 ---------------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
                                        P+ +I+ +L+S  C+      A  +L EMLE
Sbjct: 418 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 477

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           K + PD  + + L  G         A K+F  ME +G+ P
Sbjct: 478 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRP 517



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 153/324 (47%), Gaps = 4/324 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V D L K ++  +    A     QM   G  P I + N  ++ L     V  A  F +E 
Sbjct: 315 VIDALCKCWSATQ----AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREA 370

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R  ++PN  +   ++H FC  G +  A ++   M   G  P V T+  LI G    G +
Sbjct: 371 IRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKV 430

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S A+  +  M +  + P+V  +N LI G CKK  L  A  I  EM   NV P+   Y TL
Sbjct: 431 SEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATL 490

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ +  N      ++E M   G++ DI++ NA+I G C+ G   +A   + ++ K   
Sbjct: 491 IDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGC 550

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P+  TY+ +I+G   + N   A +    MI+  C+PN   +  L++ +C+  D D A  
Sbjct: 551 IPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEG 610

Query: 495 VLLEMLEKCMAPDSIILSELYSGL 518
           +   M  + ++P+ +  + L   L
Sbjct: 611 LFANMQAEALSPNVVTYTILIGSL 634



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 168/374 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +++L   Y  R           +M   GFLP + +    ++ L     ++   
Sbjct: 235 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIG 294

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EMR+  +SPNV   N V+ A CK     +A+ + K M + G  P + T+NTLI+G 
Sbjct: 295 SLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGL 354

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C++G +  A  F     +  + PN +++  LI GFC +G+L  A+ +  EM     +P+V
Sbjct: 355 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDV 414

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+  LI+G    G       + E+M    +  D+  YN LI GLCK+     A  ++++
Sbjct: 415 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEE 474

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + + ++ P+   Y+ LI G    +N   A ++++ M   G RP+      ++  +CQ   
Sbjct: 475 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGM 534

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
              A   +  M +    PD    + + SG    G    A++    M  R   P       
Sbjct: 535 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 594

Query: 549 TINCAPENGEKESG 562
            IN   + G+ +S 
Sbjct: 595 LINGYCKTGDTDSA 608



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 136/286 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + L +  L   +  R +   A+D   +M   G  P + +    +  L+ + +V  
Sbjct: 373 RELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSE 432

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   ++M   ++ P+V   N+++   CK  ++  A  + + M      P    Y TLI 
Sbjct: 433 ALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLID 492

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G      L  A K    ME  G++P++++ N +I G+C+ G + EA    S M+     P
Sbjct: 493 GFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 552

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TY T+I+GY + GN         +M++   K +++TY++LI G CK G T  A  L 
Sbjct: 553 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 612

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            ++   +L PN  TY+ LI     +    RA   +++M+ + C PN
Sbjct: 613 ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 658



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 141/334 (42%), Gaps = 2/334 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           CD   + F+ L     H    R A     +       P   S    +        +  A 
Sbjct: 340 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAAS 399

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM     +P+V T   ++H     G +  A+ V + M      P V  YN LISG 
Sbjct: 400 DLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 459

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C K +L  A    + ++EKN +QP+   + TLI GF +   L +A +IF  M+   V P+
Sbjct: 460 CKKHMLPAAKNILEEMLEKN-VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPD 518

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +V+ N +I GY Q G           M + G   D  TY  +I G  K+G    A   + 
Sbjct: 519 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 578

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+ K    PN  TYS+LI G C   +++ A  L+ +M      PN   + +L+ +  + +
Sbjct: 579 DMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKD 638

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
              RA      ML    +P+ + L  L +GL  C
Sbjct: 639 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 672



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 15/266 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +   + SE +  A   ++ M    + P++ + N ++  +C+ G++  A+    NM  +G
Sbjct: 490 LIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVG 549

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            IP   TY T+ISG+  +G L+ A+++   M K   +PNV+T+++LI G+CK G    A 
Sbjct: 550 CIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAE 609

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F+ M+A  +SPNVVTY  LI    +          +E ML N    + +T + L+ GL
Sbjct: 610 GLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 669

Query: 414 ------------CKEGKTK-KAAYLV--KDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                       C   +   K A LV  K L  +   P  S Y+A+I   C       A 
Sbjct: 670 TSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREAL 729

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFC 484
                M + G  PN   F  L+  FC
Sbjct: 730 DFKNRMAKKGYVPNPITFLSLLYGFC 755



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 15/177 (8%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + +  L   Y       +A   F  M+     P + +    + SL   ++V  
Sbjct: 583 RKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 642

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAF--CKLGII-------------ERAVEVFKNMES 291
           A  +++ M  N  SPN  TL+ +++    C   +I             +  + VFK +  
Sbjct: 643 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 702

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
               P  + YN +I   C   +L  A+ FKN M K G  PN ITF +L++GFC  GK
Sbjct: 703 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 759



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 59/275 (21%), Positives = 103/275 (37%), Gaps = 54/275 (19%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G + S++     K+F+     ++      +  + + K Y        A      MR
Sbjct: 489 TLIDGFIRSENLGDARKIFE--FMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMR 546

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   +    +S       ++ AL +  +M + +  PNV T + +++ +CK G  +
Sbjct: 547 KVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTD 606

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISG--------------------HCN---------- 310
            A  +F NM++    P+V TY  LI                      HC+          
Sbjct: 607 SAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLV 666

Query: 311 KGLLS---------------------LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            GL S                     L + FK L+   G  P    +N +IF  C+   L
Sbjct: 667 NGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNML 725

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            EA    + M      PN +T+ +L+ G+  VG S
Sbjct: 726 REALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKS 760


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 178/356 (50%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  KF +A   FC+M     +P I    + L+ +    + DI +  Y +M    IS ++Y
Sbjct: 581 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 640

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           +  +++H FC+   +  A+ +   M  +GF PS+ T  +L++G C       A+   + M
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +  G  PNV+ +NT+I G CK   L+ A  +F  M+   +  + VTYNTLI+G    G  
Sbjct: 701 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
              A L  +M++  I  +++ + ALI    KEG   +A  L K++ + S+VPN  TY++L
Sbjct: 761 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+      A  ++  M+  GC P+   +  L++ FC+++  +   ++  EM  + +
Sbjct: 821 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             D+   + L  G    GK  +A K+F +M   G+ P        ++C   NG+ E
Sbjct: 881 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 936



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 178/360 (49%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + H  +F +A   F +M     LP I    + L++  +  R +  + F ++M    IS +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           +Y+  +++H FC+   +  A+ V   M  +G+ PS+ T+ +L+ G C    +  A     
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
           LM K+G +PNV+ +NTLI G CK G+L+ A  + +EM+   +  +VVTYNTL+ G    G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                A +  +M++  I  D++T+ ALI    K+G   +A  L K++ ++S+ PN  TY+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ++I G C+      A + +  M   GC PN   +  L+S FC+    D   ++   M  +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
               D    + L  G    GK  +A+ +F  M  R + P        ++    NGE ES 
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 4/354 (1%)

Query: 161  SILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
            S+L G    + F     L DS+  + +     + ++++ +       +   NA + F  M
Sbjct: 679  SLLNGFCQGNRFQEAVSLVDSMDGFGFV---PNVVIYNTVINGLCKNRDLNNALEVFYCM 735

Query: 220  RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
               G      + N  +S L +S R   A    ++M + +I PNV     ++  F K G +
Sbjct: 736  EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 795

Query: 280  ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
              A  ++K M     +P+V TYN+LI+G C  G L  A    +LM   G  P+V+T+NTL
Sbjct: 796  LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855

Query: 340  IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
            I GFCK  ++ +  ++F EM    +  +  TYNTLI+GY Q G   +   ++  M+  G+
Sbjct: 856  ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915

Query: 400  KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              DI+TYN L+  LC  GK +KA  +V+DL K+ +  +  TY+ +I G C     + A+ 
Sbjct: 916  SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 975

Query: 460  LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            L++S+ R G +P+   +  ++S  C+      A ++   M E    P   I  E
Sbjct: 976  LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 1029



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 181/386 (46%), Gaps = 11/386 (2%)

Query: 154 RKFKSSESILR-GILDSDSFDLPSKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKK 208
           R F      LR G L S  F+    LF      + M  S PL     F  L    A+ ++
Sbjct: 33  RAFSDYREKLRTGFLHSIRFEDAFALF------FEMVHSQPLPSIVDFTRLLTATANLRR 86

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           +        +M  YG    + S    +       R+  AL    +M +    P++ T   
Sbjct: 87  YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++H FC +  I  A  +   M   G+ P+V  YNTLI G C  G L++A++  N MEK G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           +  +V+T+NTL+ G C  G+  +A R+  +M   +++P+VVT+  LI+ + + GN +   
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            LY+EM+++ +  + +TYN++I GLC  G+   A      +      PN  TY+ LI+G 
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C  +  +   +L++ M   G   +   +  L+  +CQ      A ++   M+ + + PD 
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386

Query: 509 IILSELYSGLHHCGKDELAMKLFRKM 534
           I    L  GL   G+ E A+  F  M
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V++ L        +   A +   +M   G    + + N  L+ L  S R   A    ++
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I+P+V T   ++  F K G ++ A E++K M      P+  TYN++I+G C  G 
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K  +LM   G  PNV+T+NTLI GFCK   + E  ++F  M     + ++ TYNT
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY QVG   +   ++  M+   +  DI+T+  L+ GLC  G+ + A     D+ ++ 
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
                  Y+ +I G C     E+A++L+  +   G +P+   + +++   C+N     A 
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476

Query: 494 EVLLEMLEK 502
           E++  M E+
Sbjct: 477 ELIRRMKEE 485



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 170/403 (42%), Gaps = 40/403 (9%)

Query: 179  FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
            FD ++Y Y   ++  +  DL     L   +    +   A     +M   GF P I +   
Sbjct: 620  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 679

Query: 234  FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
             L+      R   A+     M      PNV   N V++  CK   +  A+EVF  ME  G
Sbjct: 680  LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739

Query: 294  FIPSVTTYNTLISGHCNKG--------------------------LLSLAMKFKNLME-- 325
                  TYNTLISG  N G                          L+   +K  NL+E  
Sbjct: 740  IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 326  -------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                   +  + PNV T+N+LI GFC  G L +A  +F  M +    P+VVTYNTLI G+
Sbjct: 800  NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859

Query: 379  GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
             +    E G  L+ EM   G+  D  TYN LI G C+ GK   A  +   +    + P+ 
Sbjct: 860  CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919

Query: 439  STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             TY+ L+   C     E+A  + + + +S    +   + +++   C+ +    A  +   
Sbjct: 920  VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979

Query: 499  MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  K + PD+I    + SGL   G    A KL R+M+  G +P
Sbjct: 980  LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 1022



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 149/307 (48%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           K  +  L S R + A   + EM  ++  P++     ++ A   L   E  +   + ME  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G    + ++  LI   C    LS A+     M K G +P+++TF +L+ GFC   ++ +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +   M  +   PNVV YNTLI+G  + G   +   L  EM + G+  D++TYN L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G+   AA +++D+ K S+ P+  T++ALI     + N + A +LYK MI+S   PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  +++  C +     A +    M  K   P+ +  + L SG       +  MKLF+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 533 KMEIRGL 539
           +M   G 
Sbjct: 341 RMSCEGF 347



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 161/351 (45%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L   +    +  +A      M   G+ P +   N  +  L  +  ++IAL 
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM +  +  +V T N ++   C  G    A  + ++M      P V T+  LI    
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A +    M ++ + PN +T+N++I G C  G+L++A + F  M +    PNVV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI+G+ +    + G  L++ M   G   DI TYN LI G C+ GK + A  +   +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               + P+  T+  L+ G CV    E A   +  M  S        + +++   C+ +  
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           ++A E+   +  + + PD+   + +  GL   G    A +L R+M+  G++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +  + ++ L     +  ++ +A      M      P + +    +   +    +D A   
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           YKEM ++ + PN  T N +++  C  G +  A + F  M S G  P+V TYNTLISG C 
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             ++   MK    M   G   ++ T+NTLI G+C+ GKL  A  IF  M +  V+P+++T
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +  L++G    G  E     +++M  +   + I+ YN +I GLCK  K +KA  L   L 
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPN 472
              + P+A TY+ +I G C       A +L + M   G  C+ N
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 14/272 (5%)

Query: 178 LFDSILYSYRMCDSSPLVFDL--------------LFKTYAHRKKFRNATDTFCQMRDYG 223
           L   + YS R  D++ ++ D+              L   +  +     A + + +M    
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P   + N  ++ L    R+  A   +  M      PNV T N ++  FCK  +++  +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F+ M   GF   + TYNTLI G+C  G L +A+     M    + P++IT   L+ G 
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C  G++  A   F +M+ +     +V YN +I+G  +    E    L+  +   G+K D 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            TY  +ILGLCK G  ++A  L++ + +  ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 95/204 (46%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            C    + ++ L   +   K+  +    FC+M   G +    + N  +     + ++++A 
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +  M    +SP++ T N+++   C  G IE+A+ + ++++       + TYN +I G 
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 309  CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
            C    L  A      + + G++P+ I + T+I G C+KG   EA+++   MK     P+ 
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 369  VTYNTLINGYGQVGNSEMGASLYE 392
              Y+  +  +    ++E+  + +E
Sbjct: 1025 RIYDETLRDHYTSLSAELIKAAHE 1048



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%)

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF    +  +A  +F EM  +   P++V +  L+     +   E      ++M   GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ ++  LI   C+  +   A  ++  + K    P+  T+ +L+ G C+      AF L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++SG  PN  ++  L+   C+N + + A E+L EM +K +  D +  + L +GL + 
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+   A ++ R M  R + P
Sbjct: 225 GRWSDAARMLRDMMKRSINP 244



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 2/204 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G+          K FD  L + + C  + + ++ L   +   +        F +M 
Sbjct: 286 SIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF   I + N  +       ++ +AL  +  M   R++P++ T  +++H  C  G IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+  F +M        +  YN +I G C    +  A +    +   G++P+  T+  +I
Sbjct: 404 SALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463

Query: 341 FGFCKKGKLHEANRIFSEMKATNV 364
            G CK G   EA+ +   MK   +
Sbjct: 464 LGLCKNGPRREADELIRRMKEEGI 487


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 189/407 (46%), Gaps = 25/407 (6%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS-------------------ESI 162
           L+L  F  +  H P + T  T++ V+  L +      +                    S+
Sbjct: 135 LALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSL 194

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           + G   ++  D+   LFD +    R      + +  L +      +   A + F +M   
Sbjct: 195 IVGYCRTNQVDVARDLFDKM--PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ- 251

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
              P +      +  L ++ER +  L   + M+     P+      V+   C+    + A
Sbjct: 252 ---PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEA 308

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            E+ + M   G  P V T   +I+ +C +G +S A++   LM+  G +PNV T+N L+ G
Sbjct: 309 EEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQG 368

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC +GK+H+A  + ++M+A  V+P+ VTYN LI G    G+ E    L   M  +G+  D
Sbjct: 369 FCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIAD 428

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             TYNALI  LCK+G+T +A  L   L+   + PNA T+++LI G C    ++ A++  +
Sbjct: 429 QYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLE 488

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            M+ +GC P+ + +   +   C+ +        + EML+K + P ++
Sbjct: 489 KMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 535



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 163/338 (48%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +K + A +   +M + G  P + +C   +++     R+  AL   + M+     PNV+T 
Sbjct: 303 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 362

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  FC  G + +A+ +   M + G  P   TYN LI G C  G +  A +   LME 
Sbjct: 363 NALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 422

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +G+  +  T+N LI   CK G+  +A  +F  ++   + PN VT+N+LING  + G +++
Sbjct: 423 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADI 482

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                E+M+  G   D  TY++ I  LCK   +++    + ++ +  + P+   Y+ +I 
Sbjct: 483 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 542

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                +N     + +  M+ SGC P+   +   M  +C     + A  VL+EM +  +  
Sbjct: 543 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 602

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           D++  + L  G    G+ + A+ + ++M     +P  F
Sbjct: 603 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 640



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 163/349 (46%), Gaps = 4/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ + ++   R     A      M   G+ P   + N  +     + +VD+A   + +M 
Sbjct: 156 YNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 215

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +V +   ++   C+ G I+ AVE+F  M+     P +  Y  L+ G CN     
Sbjct: 216 LRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGE 271

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +     M++ G +P+   +  ++   C++ K  EA  +  EM    ++P VVT   +I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N Y + G       + E M   G K ++ TYNAL+ G C EGK  KA  L+  +    + 
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A TY+ LI GQC+  + E AF+L + M   G   +++ +  L++  C++   D+A  +
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 451

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              +  + + P+++  + L +GL   GK ++A K   KM   G  P  +
Sbjct: 452 FDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTY 500



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFD 180
           +PS+     ++ V+    + RK K +E +L+ + +              +++    ++ D
Sbjct: 286 RPST---RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 342

Query: 181 SI----LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++    L   R C  +   ++ L + + +  K   A     +MR  G  P   + N  + 
Sbjct: 343 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 402

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  ++ A    + M  + +  + YT N +++A CK G  ++A  +F ++E+ G  P
Sbjct: 403 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 462

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+N+LI+G C  G   +A KF   M   G  P+  T+++ I   CK     E     
Sbjct: 463 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 522

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM   +V P+ V Y  +I+   +  N  + A  + EM+ +G   D++TY   +   C E
Sbjct: 523 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 582

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+  +A  ++ ++ KN +  +   Y+ L+ G      ++ A  + K M      PN+  +
Sbjct: 583 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 642

Query: 477 EMLM 480
            +L+
Sbjct: 643 FILL 646



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 56/379 (14%)

Query: 213 TDTFCQMRD----YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           TD  C + D     G  P   + N  ++ L  S + DIA  F ++M     +P+ YT + 
Sbjct: 445 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 504

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
            +   CK+   +  +     M      PS   Y  +I     +    L  +    M  +G
Sbjct: 505 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 564

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             P+V+T+ T +  +C +G+L+EA  +  EM    V+ + + YNTL++G+  +G ++   
Sbjct: 565 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 624

Query: 389 SLYEEM---------------LRNGIKV----DIL------------------------- 404
           S+ ++M               LR+ +++    D+L                         
Sbjct: 625 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 684

Query: 405 --------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                   TY++++ G  ++G+T++A  LV  + ++S+  N   Y+AL+T  C  K    
Sbjct: 685 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 744

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A+ L  SMI+ G  P    ++ L+S        D+A E+ +    K  +PD I+   +  
Sbjct: 745 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 804

Query: 517 GLHHCGKDELAMKLFRKME 535
           GL   G  +++ ++   +E
Sbjct: 805 GLIKKGHSDISREMIIMLE 823



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/328 (18%), Positives = 135/328 (41%), Gaps = 38/328 (11%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS++    ++IV+H L K R                ++ L ++ +  ++ S   C+   
Sbjct: 531 KPSTVN---YTIVIHKLLKER----------------NYGLVARTWGEMVSSG--CNPDV 569

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +    + Y    +   A +   +M   G      + N  +       + D A+   K+
Sbjct: 570 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 629

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIE-----------RAVEV------FKNMESMGFIP 296
           M      PN +T  +++    ++ ++E           +A+E+      F  M+   F+P
Sbjct: 630 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 689

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  TY++++ G    G    A    +LM+++ I  N   +  L+  FCK  +  +A  + 
Sbjct: 690 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 749

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M      P +++Y  L++G    G ++    ++          D + +  +I GL K+
Sbjct: 750 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 809

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           G +  +  ++  L++ +  P+  TY+ L
Sbjct: 810 GHSDISREMIIMLERMNCRPSHQTYAML 837


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 178/387 (45%), Gaps = 42/387 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFY--- 251
           F ++F+ Y        A D F +M D +     ++S N  L+ +++       L FY   
Sbjct: 115 FIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174

Query: 252 --KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-------------------- 289
               M  N ISPN  + N+V+ A CKLG ++RA+EVF+ M                    
Sbjct: 175 VNSNMNMN-ISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 290 ---------------ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                          +S G  PS   YN LI G C KG LS   K  + M   G  PN +
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+NTLI G C KGKL +A  +   M ++   PN VTY TLING  +   +  GA L   M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G +++   Y+ LI GL KEGK ++A  L K + +    PN   YSA+I G C     
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKP 413

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A ++   MI SGC PN + +  LM  F +    + A +V  EM E   + +    S L
Sbjct: 414 NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVL 473

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             GL   G+ + AM ++ KM   G+ P
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKP 500



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 195/411 (47%), Gaps = 3/411 (0%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           F  + + H P       H +V     K R  KS  S+L  I++   +    + +D ++ S
Sbjct: 119 FRAYGKAHLPEKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEGLYHRGLEFYDYVVNS 177

Query: 186 YRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
               + SP  L F+L+ K          A + F  M +   LP   +    +  L   ER
Sbjct: 178 NMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEER 237

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A+    EM+    SP+    N+++   CK G + R  ++  NM   G  P+  TYNT
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNT 297

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C KG L  A+     M  +   PN +T+ TLI G  K+ +  +  R+   M+   
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERG 357

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              N   Y+ LI+G  + G +E   +L+++M   G + +I+ Y+A+I GLC+EGK  +A 
Sbjct: 358 YRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAK 417

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++  +  +  +PN  TYS+L+ G      SE A Q+++ M  +GC  N+  + +L+   
Sbjct: 418 EILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGL 477

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           C       A  V  +ML   + PD++  S +  GL   G  + A+KL+ +M
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM 528



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 176/390 (45%), Gaps = 14/390 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   +  D    L D +      C  SP+++++L      +      T     M 
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEM--QSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF 284

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + N  +  L    ++D A+   + M  ++  PN  T   +++   K     
Sbjct: 285 LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAM 344

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
               +  +ME  G+  +   Y+ LISG   +G    AM     M + G +PN++ ++ +I
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI 404

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GK +EA  I + M ++   PNV TY++L+ G+ + G SE    ++ EM   G  
Sbjct: 405 DGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCS 464

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +   Y+ LI GLC  G+ K+A  +   +    + P+   YS++I G C   + + A +L
Sbjct: 465 RNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKL 524

Query: 461 YKSMI---RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI----ILSE 513
           Y  M+       +P+   + +L+   C  +D  RA ++L  ML++   PD I     L+ 
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNT 584

Query: 514 LYSGLHHCGK-----DELAMKLFRKMEIRG 538
           L      C +     +EL  +L ++  + G
Sbjct: 585 LSEKSDSCEEGRSFLEELVARLLKRQRVSG 614



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 24/279 (8%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++ +L        K   A   + +M + G  P I   +  +  L    + + A      M
Sbjct: 364 IYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGM 423

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             +   PNVYT + +M  F K G+ E A++V++ M+  G   +   Y+ LI G C  G +
Sbjct: 424 ISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRV 483

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM---KATNVSPNVVTY 371
             AM   + M   GI+P+ + ++++I G C  G +  A +++ EM   +     P+VVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL------CKEGKT------ 419
           N L++G     +      L   ML  G   D++T N  +  L      C+EG++      
Sbjct: 544 NILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELV 603

Query: 420 ---------KKAAYLVKDLDKNSLVPNASTYSALITGQC 449
                      A  +V+ +    L P  ST++ ++   C
Sbjct: 604 ARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEIC 642


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P I   N  +    ++  ++ AL  ++ M  NR SPNV T   ++H  CK G +ERA
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +F  M   G  P+V TY  LI G CN+G L  A +  +LME NG+ PN  TF+ LI  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+ K+ EA      +    V  N V Y +LI+G  + G  +    L ++M+  G   D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             +Y++LI GLC++ K  +A  +++D+ +  +  +  TY+ +I        SE   +++ 
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI +G  P+   + + + ++C+    + A  ++++M+++ + P+ +  + L  G  + G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A   F  M  +G  P
Sbjct: 507 LVSQAFSTFEVMVGKGWKP 525



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 156/339 (46%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y       +A   F  M   G L    +    L  LL +  V  A+  +  MR +  +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPD 176

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +    ++H  C+ G  E A  + +   S GF P++  YN LI G+CN G +  A+K   
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+ N   PNV T+  LI G CK GK+  A  +FS M    + PNVVTY  LI G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + +    L   M  NG+  +  T++ LI  LCK  K ++A   +  L K  +  N   Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +LI G C     + A +L + MI  G  P+ H +  L+   C+ +   +A  +L +M+EK
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +    +  + +   L      E   K+F KM   G+ P
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 140/285 (49%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ Y     +  +C+ G++  A  VF  M   G + +  TY  L+ G    G++  AM
Sbjct: 103 LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAM 162

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M  +   P+   + T++ G C+ G+  EA  +  E  +    PN+V YN LI+GY
Sbjct: 163 TVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGY 222

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G  E    ++E M  N    ++ TY  LI GLCK GK ++A  L   + +  L PN 
Sbjct: 223 CNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ALI GQC   + + AF+L   M  +G  PN   F +L+   C+ E  + A   L  
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           +++K +  + ++ + L  GL   GK + A +L +KM   G +P  
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%)

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +L   R C  +   +  L          R A   F  MR     P        +  L ++
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R + A    +E   N   PN+   N ++  +C  G +E A++VF+ M+     P+V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             LI G C  G +  AM   + M + G++PNV+T+  LI G C +G L  A R+   M+ 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + PN  T++ LI+   +    E        +++ G+KV+ + Y +LI GLCK GK   
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ +     VP+A +YS+LI G C +K   +A  + + M+  G + +   + +++ 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    +   ++  +M+   + PD +  +         G+ E A  +  +M  RG+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 3/263 (1%)

Query: 285 VFKNMESMGF-IPS--VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +F +MES+   +P+  + TY TLI+ +C  G +  A +    +   G+ P+   + + + 
Sbjct: 56  MFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVL 115

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+C+ G L  A R+F  M          TY  L++G    G      +++  M  +    
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAP 175

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D   Y  ++ GLC+ G+T++A  L+++   N   PN   Y+ALI G C     E A +++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M  + C PN   +  L+   C++   +RA  +   M+E  + P+ +  + L  G  + 
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G  + A +L   ME  GL+P  +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDW 318


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 178/358 (49%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  KF +A   FC+M     +P I    + L+ +    + DI +  Y +M    IS ++Y
Sbjct: 56  HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           +  +++H FC+   +  A+ +   M  +GF PS+ T  +L++G C       A+   + M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +  G  PNV+ +NT+I G CK   L+ A  +F  M+   +  + VTYNTLI+G    G  
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
              A L  +M++  I  +++ + ALI    KEG   +A  L K++ + S+VPN  TY++L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+      A  ++  M+  GC P+   +  L++ FC+++  +   ++  EM  + +
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             D+   + L  G    GK  +A K+F +M   G+ P        ++C   NG+ E  
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 4/354 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           S+L G    + F     L DS+  + +     + ++++ +       +   NA + F  M
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFV---PNVVIYNTVINGLCKNRDLNNALEVFYCM 210

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G      + N  +S L +S R   A    ++M + +I PNV     ++  F K G +
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A  ++K M     +P+V TYN+LI+G C  G L  A    +LM   G  P+V+T+NTL
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFCK  ++ +  ++F EM    +  +  TYNTLI+GY Q G   +   ++  M+  G+
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             DI+TYN L+  LC  GK +KA  +V+DL K+ +  +  TY+ +I G C     + A+ 
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           L++S+ R G +P+   +  ++S  C+      A ++   M E    P   I  E
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 170/403 (42%), Gaps = 40/403 (9%)

Query: 179 FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
           FD ++Y Y   ++  +  DL     L   +    +   A     +M   GF P I +   
Sbjct: 95  FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L+      R   A+     M      PNV   N V++  CK   +  A+EVF  ME  G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214

Query: 294 FIPSVTTYNTLISGHCNKG--------------------------LLSLAMKFKNLME-- 325
                 TYNTLISG  N G                          L+   +K  NL+E  
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 326 -------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                  +  + PNV T+N+LI GFC  G L +A  +F  M +    P+VVTYNTLI G+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    E G  L+ EM   G+  D  TYN LI G C+ GK   A  +   +    + P+ 
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ L+   C     E+A  + + + +S    +   + +++   C+ +    A  +   
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  K + PD+I    + SGL   G    A KL R+M+  G +P
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 95/204 (46%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L   +   K+  +    FC+M   G +    + N  +     + ++++A 
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M    +SP++ T N+++   C  G IE+A+ + ++++       + TYN +I G 
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A      + + G++P+ I + T+I G C+KG   EA+++   MK     P+ 
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499

Query: 369 VTYNTLINGYGQVGNSEMGASLYE 392
             Y+  +  +    ++E+  + +E
Sbjct: 500 RIYDETLRDHYTSLSAELIKAAHE 523


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 178/369 (48%), Gaps = 3/369 (0%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +KL DS+  S +   +S   ++ L      R   +       +M + G +P + + N  +
Sbjct: 300 AKLVDSMRLSKK---ASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAII 356

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
             LL SE+V+ A   + EMR   + P++ T N +++ +CK G ++ A+ +  ++   G  
Sbjct: 357 HGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLA 416

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V TYNTLI G+C  G L  A + K  M + G  P+V T+  L+ G  K   L  A   
Sbjct: 417 PTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREF 476

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F EM +  + P+   YNT I     +G++     L E M+  GI  D +TYN +I GLCK
Sbjct: 477 FDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCK 536

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G  K A  L   +  + L P+  TY+ LI   C R     A +L   M+  G +P+   
Sbjct: 537 TGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVT 596

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           + +L+ T C+  +   A     +ML+  + P+ I  + L   L   G+  LA   F +M 
Sbjct: 597 YTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEML 656

Query: 536 IRGLLPKGF 544
            RGL P  +
Sbjct: 657 ERGLAPNKY 665



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 159/327 (48%), Gaps = 13/327 (3%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P +  CN  L  L D+ R D     Y+EM +  I P + T N ++ +F K G  + 
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 282 AVEVFKNMESM--GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           A  + K ME+   G + +  TYN +IS    +G L  A K  + M  +  + +  T+N L
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPL 320

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I    ++G + +   +  EM+   + P +VTYN +I+G  +    E     + EM   G+
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D++TYN+++ G CK G  K+A +L+ DL +  L P   TY+ LI G C     E A +
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI-----ILSEL 514
           L + M+  GC P+   + +LM+   +  +   A E   EML K + PD       I +EL
Sbjct: 441 LKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAEL 500

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G  H      A +L   M ++G+ P
Sbjct: 501 ILGDTH-----KAFQLREVMMLKGIYP 522



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/290 (29%), Positives = 135/290 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++ L   Y        A     +M + G  P + +    ++       + +A  F+ E
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDE 479

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+ +  N  + A   LG   +A ++ + M   G  P   TYN +I G C  G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A   K  M  +G+QP+ IT+  LI   C++G L EA ++ + M +  + P+VVTY  
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + GN       + +ML  GI+ + +TYN LI  LC+ G+T  A +   ++ +  
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L PN  TY+ LI G C   N   A +LY  M ++G  P+      L   F
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 35/337 (10%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +MR  G LP + + N  L+    +  +  AL    ++RR  ++P V T N ++  +C+
Sbjct: 372 FAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 431

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGH----------------CNKGL------ 313
           LG +E A  + + M   G  P V TY  L++G                  +KGL      
Sbjct: 432 LGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFA 491

Query: 314 -------------LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
                           A + + +M   GI P+ +T+N +I G CK G L +A  +  +M 
Sbjct: 492 YNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMV 551

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           +  + P+ +TY  LI+ + + G       L   M+ +G++  ++TY  LI   C+ G   
Sbjct: 552 SDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLY 611

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A    + +    + PN  TY+ LI   C    +  A+  +  M+  G  PNK+ + +L+
Sbjct: 612 SAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLI 671

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              C+  ++  A  +  EM +  + PD    + L+ G
Sbjct: 672 DGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 708



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 95/203 (46%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P   + N  +  L  +  +  A     +M  + + P+  T   ++HA C+ G++  A
Sbjct: 519 GIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEA 578

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++   M S G  PSV TY  LI   C +G L  A  +   M   GI+PN IT+N LI  
Sbjct: 579 RKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHA 638

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+ G+   A   F EM    ++PN  TY  LI+G  + GN      LY EM +NGI  D
Sbjct: 639 LCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPD 698

Query: 403 ILTYNALILGLCKEGKTKKAAYL 425
             T+NAL  G  K        YL
Sbjct: 699 YCTHNALFKGFDKGHMYHAIEYL 721



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 3/188 (1%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F  +    V+P+V   N ++         +   ++Y EML+  I+  I+TYN L+    K
Sbjct: 196 FRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLK 255

Query: 416 EGKTKKAAYLVKDLDKN--SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           EG+  +A+ L+K+++      + N  TY+ +I+      + E A +L  SM R   + + 
Sbjct: 256 EGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASS 314

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L++   +     +   + +EM  + + P  +  + +  GL    + E A   F +
Sbjct: 315 FTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAE 374

Query: 534 MEIRGLLP 541
           M   GLLP
Sbjct: 375 MRAMGLLP 382


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 187/374 (50%), Gaps = 4/374 (1%)

Query: 188 MCDSSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           M +++PL     F  LF      K ++       QM   G    + S    ++       
Sbjct: 82  MVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCH 141

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD       ++ +  + PNV T + +++ FC  G I RA+E+F  M + G+ P+V +Y+ 
Sbjct: 142 VDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSI 201

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I G C  G  +  +K    M+  G +P+V+ +NT++   CK   ++EA  IF +MK T 
Sbjct: 202 IIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTG 261

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P VVTY +LI+G   +G  +    L  EM    I  D++ ++ LI  +CKEG+  +A 
Sbjct: 262 ILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEAR 321

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++K + +  + P+ +TY+ L+ G C+R     A ++++ MI  G  P+   F +L++ +
Sbjct: 322 VILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGY 381

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+ +  D A ++  EM  + + PD++  + L SGL    +   A +LF+ M   G  P  
Sbjct: 382 CKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNL 441

Query: 544 FDKLRTINCAPENG 557
                 ++C  + G
Sbjct: 442 VTYSILLDCLSKQG 455



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 170/364 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    K   A + F  M   G+ P + S +  +  L    +    +   + 
Sbjct: 162 ITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEH 221

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+     P+V   N ++   CK  ++  AV +F  M+  G +P+V TY +LI G  N G 
Sbjct: 222 MKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGR 281

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A    N M+   I P+++ F+ LI   CK+G++ EA  I   M    V P+V TYNT
Sbjct: 282 WKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNT 341

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+NGY           ++E M+  G   D+ +++ L+ G CK  +  +A  L  ++    
Sbjct: 342 LMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRG 401

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  +Y+ LI+G C  +    A +L+K M  +G  PN   + +L+    +    D+A 
Sbjct: 402 LIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAM 461

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            +   M    + PD +  + +  G+   GK + A +LF ++ ++GL P  +    TI+  
Sbjct: 462 GLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGV 521

Query: 554 PENG 557
            + G
Sbjct: 522 CKGG 525



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 157/318 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   ++++ +       +    A   FC+M+  G LP + +    +  L +  R   A 
Sbjct: 227 CEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAF 286

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G   EM+   I P++   ++++   CK G +  A  + K M  MG  P V TYNTL++G+
Sbjct: 287 GLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGY 346

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A K   +M   G  P+V +F+ L+ G+CK  ++ EA ++F EM    + P+ 
Sbjct: 347 CLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDT 406

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YNTLI+G  Q         L+++M  NG   +++TY+ L+  L K+G   +A  L + 
Sbjct: 407 VSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ + L P+  TY+ +I G C     + A +L+  +   G +PN  +    +   C+   
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526

Query: 489 FDRAAEVLLEMLEKCMAP 506
            D A +   +M +   +P
Sbjct: 527 LDEAHKAFRQMEKDDCSP 544


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 163/319 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P I   N  +    ++  ++ AL  ++ M  NR SPNV T   ++H  CK G +ERA
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERA 266

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +F  M   G  P+V TY  LI G CN+G L  A +  +LME NG+ PN  TF+ LI  
Sbjct: 267 MVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDA 326

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+ K+ EA      +    V  N V Y +LI+G  + G  +    L ++M+  G   D
Sbjct: 327 LCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPD 386

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             +Y++LI GLC++ K  +A  +++D+ +  +  +  TY+ +I        SE   +++ 
Sbjct: 387 AHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFD 446

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI +G  P+   + + + ++C+    + A  ++++M+++ + P+ +  + L  G  + G
Sbjct: 447 KMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLG 506

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A   F  M  +G  P
Sbjct: 507 LVSQAFSTFEVMVGKGWKP 525



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 156/339 (46%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y       +A   F  M   G L    +    L  LL +  V  A+  +  MR +  +P+
Sbjct: 117 YCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPD 176

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +    ++H  C+ G  E A  + +   S GF P++  YN LI G+CN G +  A+K   
Sbjct: 177 THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFE 236

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M+ N   PNV T+  LI G CK GK+  A  +FS M    + PNVVTY  LI G    G
Sbjct: 237 GMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEG 296

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + +    L   M  NG+  +  T++ LI  LCK  K ++A   +  L K  +  N   Y+
Sbjct: 297 HLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYT 356

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +LI G C     + A +L + MI  G  P+ H +  L+   C+ +   +A  +L +M+EK
Sbjct: 357 SLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEK 416

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +    +  + +   L      E   K+F KM   G+ P
Sbjct: 417 GIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINP 455



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 140/285 (49%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+ Y     +  +C+ G++  A  VF  M   G + +  TY  L+ G    G++  AM
Sbjct: 103 LAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAM 162

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M  +   P+   + T++ G C+ G+  EA  +  E  +    PN+V YN LI+GY
Sbjct: 163 AVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGY 222

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G  E    ++E M  N    ++ TY  LI GLCK GK ++A  L   + +  L PN 
Sbjct: 223 CNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNV 282

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ALI GQC   + + AF+L   M  +G  PN   F +L+   C+ E  + A   L  
Sbjct: 283 VTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGS 342

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           +++K +  + ++ + L  GL   GK + A +L +KM   G +P  
Sbjct: 343 LVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDA 387



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/360 (26%), Positives = 164/360 (45%)

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +L   R C  +   +  L          R A   F  MR     P        +  L ++
Sbjct: 131 VLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEA 190

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R + A    +E   N   PN+   N ++  +C  G +E A++VF+ M+     P+V TY
Sbjct: 191 GRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTY 250

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             LI G C  G +  AM   + M + G++PNV+T+  LI G C +G L  A R+   M+ 
Sbjct: 251 TELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMET 310

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + PN  T++ LI+   +    E        +++ G+KV+ + Y +LI GLCK GK   
Sbjct: 311 NGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDA 370

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ +     VP+A +YS+LI G C +K   +A  + + M+  G + +   + +++ 
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIID 430

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    +   ++  +M+   + PD +  +         G+ E A  +  +M  RG+ P
Sbjct: 431 ELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFP 490



 Score =  118 bits (295), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 162/405 (40%), Gaps = 82/405 (20%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G +P   + +  + +L   E+V+ A  F   + +  +  N      ++   CK G 
Sbjct: 308 METNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK 367

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKN---------- 327
           I+ A E+ + M S GF+P   +Y++LI G C +  LS A +  +++MEK           
Sbjct: 368 IDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTI 427

Query: 328 ------------------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
                                   GI P+++T+   +  +C++G++ +A  +  +M    
Sbjct: 428 IIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRG 487

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK----------------------V 401
           V PN+VTYNTLI GY  +G      S +E M+  G K                      V
Sbjct: 488 VFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSV 547

Query: 402 DIL-------------------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           DI                           Y+  I  LC+  + ++A +    +   +L P
Sbjct: 548 DIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTP 607

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   Y+++I   C  K    A  L  SM +SG  P+   + +++S+ C+  +F  A EV 
Sbjct: 608 SEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVF 667

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++L K    D I+   L  GL   G       L   M+  G  P
Sbjct: 668 GDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 712



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 3/263 (1%)

Query: 285 VFKNMESMGF-IPS--VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           +F +MES+   +P+  + TY TLI+ +C  G +  A +    +   G+ P+   + + + 
Sbjct: 56  MFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVL 115

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+C+ G L  A R+F  M          TY  L++G    G      +++  M  +    
Sbjct: 116 GYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP 175

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D   Y  ++ GLC+ G+T++A  L+++   N   PN   Y+ALI G C     E A +++
Sbjct: 176 DTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVF 235

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M  + C PN   +  L+   C++   +RA  +   M+E  + P+ +  + L  G  + 
Sbjct: 236 EGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNE 295

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G  + A +L   ME  GL+P  +
Sbjct: 296 GHLQCAFRLLHLMETNGLVPNDW 318



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 5/157 (3%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I SC  F+  L   +R++ A  F+  M+   ++P+      ++   C+L I+  A+ +  
Sbjct: 576 IYSC--FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKK 346
           +M   G++P + +Y  +IS  C  G    A + F +L+ K     + I +  LI+G  +K
Sbjct: 634 SMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKES-NYDEIVWKILIYGLLQK 692

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           G + E + + S MK     P+  T N +I G   V N
Sbjct: 693 GSVAEFSSLLSVMKEHGYQPS-NTINAMITGEITVTN 728


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/475 (28%), Positives = 213/475 (44%), Gaps = 31/475 (6%)

Query: 69  RTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLEF 126
           R LPE +       +  +S L   +W K  +L + +      HV  L  +  D   +L F
Sbjct: 50  RNLPEDESDPTSVPHRLFSILSKPNWHKCPSLKSMVPAISPSHVSSLFSLDLDPKTALNF 109

Query: 127 FTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
             W+  +     ++ +++ +L +L  N           G++           F   L   
Sbjct: 110 SHWISQNPRYKHSVYSYASLLTLLINNGYV--------GVV-----------FKIRLLMI 150

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + CDS   V D LF     RK   N  ++F    +  +  II   N  L+SL     VD 
Sbjct: 151 KSCDS---VADTLFVLDLCRK--MNKDESF----ELKYKLIIGCYNTLLNSLARFGLVDE 201

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               Y EM  +++ PN+YT N +++ +CK+G +E A +    +   G  P   TY +LI 
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIM 261

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +  L  A K    M   G + N + +  LI G C + ++ EA  +F +MK  +  P
Sbjct: 262 GYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYP 321

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            V TY  LI             +L +EM   GIK +I TY  LI  LC + K +KA  L+
Sbjct: 322 TVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELL 381

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L+PN  TY+ALI G C R   E A  + + M     RPN   +  L+  +C+ 
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK- 440

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  +A  VL +MLE+ + PD +  + L  G    G  + A +L   M  RGL+P
Sbjct: 441 RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVP 495



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 168/346 (48%), Gaps = 1/346 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  +   + K   A +   QM + G +P + + N  ++       ++ AL   + M 
Sbjct: 361 YTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELME 420

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN  T N ++  +CK  +  +A+ V   M     +P V TYN+LI G C  G   
Sbjct: 421 SRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  +LM   G+ P+  T+ ++I   CK  ++ EA  +F  ++  +V PNVV Y  LI
Sbjct: 480 SAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALI 539

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY + G       + E+ML      + LT+NALI GLC +GK K+A  L + + K  L 
Sbjct: 540 DGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQ 599

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P  ST + LI       + + A++ ++ M+ SG +P+ H +   + T+C+      A ++
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDM 659

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +M E  ++PD    S L  G    G+   A  + ++M   G  P
Sbjct: 660 VAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEP 705



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 178/382 (46%), Gaps = 24/382 (6%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L K Y  R     A     +M +   LP + + N  +     S   D A      M 
Sbjct: 431 YNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ +T   ++ + CK   +E A ++F ++E    IP+V  Y  LI G+C  G ++
Sbjct: 490 DRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVN 549

Query: 316 LA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A +  + ++ KN + PN +TFN LI G C  GKL EA  +  +M   ++ P V T   L
Sbjct: 550 EAHLMLEKMLSKNCL-PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   + G+ +     +++ML +G K D  TY   I   C+EG+ + A  +V  + +N +
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV 668

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE------- 487
            P+  TYS+LI G      +  AF + K M  +GC P++H F  L+    + +       
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGG 728

Query: 488 -----------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
                      +FD   E+L +M+E  + P++    +L  G+   G   +A K+F  M+ 
Sbjct: 729 EPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQ 788

Query: 537 R-GLLPKG--FDKLRTINCAPE 555
           + G+ P    F+ L +  C  E
Sbjct: 789 KEGISPSELVFNALLSCCCKLE 810



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 172/414 (41%), Gaps = 80/414 (19%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L         F +A      M D G +P   +    + SL  S+RV+ A   +  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +  + PNV     ++  +CK G +  A  + + M S   +P+  T+N LI G C  G 
Sbjct: 523 LEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGK 582

Query: 314 LSLAMKFKNLMEK-----------------------------------NGIQPNVITFNT 338
           L  A   +  M K                                   +G +P+  T+ T
Sbjct: 583 LKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTT 642

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            I  +C++G+L +A  + ++MK   VSP++ TY++LI GYG +G +     + + M   G
Sbjct: 643 FIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTG 702

Query: 399 IKVDILTYNALILGLC--KEGKTKKA----------------AYLVKDLDKNSLVPNAST 440
            +    T+ +LI  L   K GK K                    L++ + ++ + PNA +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKS 762

Query: 441 YSALITGQCVRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           Y  L+ G C   N   A +++  M  + G  P++ +F  L+S  C+ E  + AA+V+ +M
Sbjct: 763 YEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDM 822

Query: 500 --------LEKCMAPDSIILSELY------------SGLHHCG--KDELAMKLF 531
                   LE C     I++  LY              L  CG   DELA K+ 
Sbjct: 823 ICVGHLPQLESC----KILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKII 872



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 139/310 (44%), Gaps = 22/310 (7%)

Query: 158 SSESIL-RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           S+++IL   +L    FD   + F  +L S    D+    +    +TY    + ++A D  
Sbjct: 603 STDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH--TYTTFIQTYCREGRLQDAEDMV 660

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT-LNMVMHAF-C 274
            +M++ G  P + + +  +    D  R + A    K M      P+ +T L+++ H    
Sbjct: 661 AKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEM 720

Query: 275 KLGIIERA----------------VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           K G ++                  VE+ + M   G  P+  +Y  L+ G C  G L +A 
Sbjct: 721 KYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAE 780

Query: 319 K-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           K F ++ +K GI P+ + FN L+   CK  K +EA ++  +M      P + +   LI  
Sbjct: 781 KVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICR 840

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G  E G S+++ +L+ G   D L +  +I G+ K+G  +    L   ++KN    +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFS 900

Query: 438 ASTYSALITG 447
           + TYS LI G
Sbjct: 901 SQTYSLLIEG 910


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 199/418 (47%), Gaps = 35/418 (8%)

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSY 186
             H P  LT   ++ ++H L+K  + + +  +L+ ++ +    D+  L + +  S+    
Sbjct: 143 DAHPPDFLT---YTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTL-TVVVQSLCLGD 198

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R+ D+  LV ++L     HR    NA                 + +  +  L   ER+D 
Sbjct: 199 RVDDARELVEEML-----HRGMAANAI----------------TYSALVDGLCKCERLDE 237

Query: 247 ALGFY-KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A+     E+ R   +P++ T + V+   CK G +  AV++F   E M   P+  TYN+LI
Sbjct: 238 AVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSCAPTAITYNSLI 294

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C  G +  A++    M  +   P+VIT+ TL+  FCK G+L +A  +F +M A  +S
Sbjct: 295 GGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLS 354

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VVT+ +L++G    G  E    L EE+ R G    I TYN ++ G CK  + +KA  L
Sbjct: 355 PDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEEL 414

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTF 483
           V D      VPN  TY+ L+ G C    +++A Q    +   G  C  +  ++ +++   
Sbjct: 415 VADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDAL 474

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C++   D A +   EM+++   P +   + +   L    + + A +L  +M   G  P
Sbjct: 475 CRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTP 532



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/369 (23%), Positives = 174/369 (47%), Gaps = 22/369 (5%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           H+  +    T+S ++  L K  +   + ++L G +    F  P    D + YS       
Sbjct: 212 HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGF-TP----DIVTYS------- 259

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
             V D L K      + R+A D F +M      P   + N  +     +  +D A+    
Sbjct: 260 -TVIDGLCKA----GRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLG 311

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           +M  +  +P+V T   +M AFCK+G ++ A E+F+ M +    P V T+ +L+ G C +G
Sbjct: 312 KMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEG 371

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A++    + + G  P + T+N ++ G+CK  ++ +A  + ++ ++    PN VTYN
Sbjct: 372 RMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYN 431

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNG--IKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
            L+ G  + G ++      +++   G      +  Y  ++  LC++G+T  A    +++ 
Sbjct: 432 ILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMI 491

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +   VP A+T++ ++   C     ++A +L + MI+ G  P     + ++S +C+     
Sbjct: 492 QRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQ 551

Query: 491 RAAEVLLEM 499
           +A E+  E+
Sbjct: 552 KADELASEL 560



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 152/320 (47%), Gaps = 9/320 (2%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L  +  +D A+G   +M+   ++P     N+V+   C+ G +  A+ V++ M    
Sbjct: 86  LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-A 144

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY  L+ G    G L  A++    M      P+  T   ++   C   ++ +A 
Sbjct: 145 HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGN-SEMGASLYEEMLRNGIKVDILTYNALILG 412
            +  EM    ++ N +TY+ L++G  +     E  A L  E+ R G   DI+TY+ +I G
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G+ + A  + +++   S  P A TY++LI G C   + + A +L   M+   C P+
Sbjct: 265 LCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  LMS FC+    D A E+  +M+   ++PD +  + L  GL   G+ E A++L  
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 533 KMEIRGLLPKGFDKLRTINC 552
           ++  RG  P     + T NC
Sbjct: 382 EITRRGCPP----TIYTYNC 397



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 37/282 (13%)

Query: 289 MESMGFIPSVTTYNTLISG-HCNKGLLSLAMKFKNLMEKNGIQPNVITFNT--------- 338
           M   G+    +T+  ++ G H +  L  L     + +   G+ P+ +  NT         
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 339 -------------------------LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                                    LI   CK   L EA  +  +MK+  ++P  + +N 
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNV 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I G  + G       +Y +M  +    D LTY  L+ GL K G+ + A  +++++    
Sbjct: 121 VIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSAR 179

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            VP+ +T + ++   C+    + A +L + M+  G   N   +  L+   C+ E  D A 
Sbjct: 180 HVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAV 239

Query: 494 EVLL-EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +LL E+  +   PD +  S +  GL   G+   A+ +F +M
Sbjct: 240 ALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 281



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/202 (20%), Positives = 89/202 (44%), Gaps = 4/202 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      +   +L + I  + R C  +   ++ +   Y    + R A +     R
Sbjct: 362 SLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFR 419

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR--ISPNVYTLNMVMHAFCKLGI 278
             GF+P   + N  ++    + R D AL +  ++         +V    +++ A C+ G 
Sbjct: 420 SRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGR 479

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            + AV+ ++ M   G++P+  T+ T++   C       A +    M K G  P   T + 
Sbjct: 480 TDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDA 539

Query: 339 LIFGFCKKGKLHEANRIFSEMK 360
           ++  +C+ G + +A+ + SE++
Sbjct: 540 VVSAYCRAGMIQKADELASELR 561


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 149/291 (51%), Gaps = 2/291 (0%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNK 311
           E+ R   SPN  T N V+  FC  G ++  +E+ + M E  G  P   TY T+ISG C  
Sbjct: 137 ELLRQMPSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKV 196

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G +  A K F  ++ +  ++PN + +N LI G+C +G L  A R   EM    VS  V T
Sbjct: 197 GKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVAT 256

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN  ++     G +    +L EEM   G+  D  TYN LI G CKEGK KKA  + + + 
Sbjct: 257 YNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV 316

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              +     TY++LI    ++   +   +L+   +R G RP+  ++  L+++ C   D D
Sbjct: 317 GKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMD 376

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA E++ EM +K + PD +  + L  GL   G+ + A  L  +M  RG+ P
Sbjct: 377 RAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQP 427



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 37/347 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV   +   +EMR R  I+P+ YT   V+  +CK+G +E A +VF  M 
Sbjct: 151 NTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEML 210

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFK---------------NL----------- 323
           + G + P+   YN LI G+C++G L +A++++               NL           
Sbjct: 211 TEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRA 270

Query: 324 ---------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
                    M + G+ P+  T+N LI G+CK+GK  +A ++F  M    +   VVTY +L
Sbjct: 271 AEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSL 330

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+     G  +    L+ + +R GI+ D+  YNALI   C  G   +A  ++ +++K  +
Sbjct: 331 IHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRI 390

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY+ L+ G C+    + A  L + M + G +P+   +  L+S +    D   A +
Sbjct: 391 TPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVK 450

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           V  EM+ K   P  +  + +  GL   G+   A  L ++M   G+ P
Sbjct: 451 VRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 155/313 (49%), Gaps = 1/313 (0%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           +K+FD +L   ++ + + ++++ L   Y  +     A     +M D G    + + N F+
Sbjct: 203 TKVFDEMLTEGKV-EPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFV 261

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            +L    R   A    +EM    ++P+ +T N++++ +CK G  ++A+++F+ M   G  
Sbjct: 262 HTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIR 321

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
            +V TY +LI     KG++    +  N   + GI+P++  +N LI   C  G +  A  I
Sbjct: 322 ATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEI 381

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EM+   ++P+ VTYNTL+ G   +G  +    L EEM + GI+ D+++YN LI G   
Sbjct: 382 MGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSM 441

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           +G  K A  +  ++      P   TY+A+I G C+      A  L K M+ +G  P+   
Sbjct: 442 KGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501

Query: 476 FEMLMSTFCQNED 488
           +  L+      ++
Sbjct: 502 YISLIEGLTTEDE 514



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 1/312 (0%)

Query: 208 KFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K  +AT  F +M   G + P     N  +    D   +++AL +  EM    +S  V T 
Sbjct: 198 KVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATY 257

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+ +H     G    A  + + M   G  P   TYN LI+G+C +G    AMK   +M  
Sbjct: 258 NLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVG 317

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI+  V+T+ +LI     KG + E +R+F++     + P++  YN LIN +   G+ + 
Sbjct: 318 KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDR 377

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              +  EM +  I  D +TYN L+ GLC  G+  +A  L++++ K  + P+  +Y+ LI+
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G  ++ + + A ++   M+  G  P    +  ++   C N     A +++ EM+   + P
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497

Query: 507 DSIILSELYSGL 518
           D      L  GL
Sbjct: 498 DDSTYISLIEGL 509



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 115/235 (48%), Gaps = 6/235 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   Y    K + A   F  M   G    + +    + +L     V      + +  
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  I P+++  N ++++ C  G ++RA E+   ME     P   TYNTL+ G C  G L 
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M K GIQP+++++NTLI G+  KG + +A ++  EM     +P ++TYN +I
Sbjct: 412 EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471

Query: 376 NGY---GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            G    GQ G++E    L +EM+ NGI  D  TY +LI GL  E +   A   VK
Sbjct: 472 KGLCLNGQGGDAE---DLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGDDVK 523



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 6/152 (3%)

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ ++ R  + +   T+N ++  LC  GK  +A  L++ +      PNA TY+ +I G C
Sbjct: 103 LFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFC 158

Query: 450 VRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML-EKCMAPD 507
            R   +   ++ + M  R G  P+K+ +  ++S +C+    + A +V  EML E  + P+
Sbjct: 159 ARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPN 218

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +++ + L  G    G  E+A++   +M  RG+
Sbjct: 219 AVMYNALIGGYCDQGNLEVALRYRGEMVDRGV 250


>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
 gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 160/294 (54%), Gaps = 2/294 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL     M    ISP+++T N +++ FC+ G +  AV++F++++ +   P+  TY +LI 
Sbjct: 260 ALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDIKDV--TPNHVTYTSLID 317

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    L  A++ K +M + G+ P VIT+N+++   C+ G+L +AN + +EM    + P
Sbjct: 318 GYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEP 377

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y ++G+      + ++M+  G+K+D  TY ALI G CK  +  KA  L+
Sbjct: 378 DNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELL 437

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +      P+  TYS L+   C ++N E   +L   ++R G   +  ++  L+  FC+ 
Sbjct: 438 FGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKI 497

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           E  D A  VL  M +K +  DS++ + L  G    GK  +   +  +M  + L+
Sbjct: 498 EKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEMYKKRLM 551



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 118/520 (22%), Positives = 220/520 (42%), Gaps = 93/520 (17%)

Query: 89  LIHSDWK-----KLTALSTHL--TPFRVKHVLLKV---QKDYVLSLEFFTWVQTHKPS-S 137
           +I   WK     K  +   HL  T   V+ VLL +    +   LS   F W+++  P+  
Sbjct: 22  VIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSLYDQSPCLSWALFKWIESSVPNYK 81

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
            +L++   +L+ILTK++ FK++ + L  I   D     S L  S++  +   D +  V  
Sbjct: 82  HSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLSTQSVL-SSLVKIHDDPDVNSHVLS 140

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L   Y + K    A   F                                   + MR N
Sbjct: 141 WLVIVYGNSKMTHEAIQVF-----------------------------------EHMRVN 165

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
              P+++   +++++  K  + +   +++K M  +G + ++  YN L+   C  G +  A
Sbjct: 166 GFRPHLHACTVLLNSLAKDRLTDTVWKIYKKMVKLGVVANIHVYNVLLHACCKSGDVEKA 225

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            K  + ME   + P++ T+NTLI  +CKKG  +EA  +   M+   +SP++ TYN+LI G
Sbjct: 226 EKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYG 285

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG------------------------- 412
           + + G       L+ ++    +  + +TY +LI G                         
Sbjct: 286 FCREGRMREAVQLFRDI--KDVTPNHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPT 343

Query: 413 ----------LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
                     LC+ G+ + A  L+ ++ +  + P+  T + LI   C   +   A ++  
Sbjct: 344 VITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKD 403

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+ +G + ++  ++ L+  FC+ ++ D+A E+L  M++   +P     S L        
Sbjct: 404 KMVGAGLKLDQFTYKALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQ 463

Query: 523 KDELAMKLFRKMEIRGL---------LPKGFDKLRTINCA 553
            +E  +KL  ++  RGL         L + F K+  I+CA
Sbjct: 464 NEEAVIKLPDELVRRGLCVDVSVYRALIRRFCKIEKIDCA 503



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 128/301 (42%), Gaps = 37/301 (12%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N + L+ ++  +    +   A++VF++M   GF P +     L++      L     K  
Sbjct: 135 NSHVLSWLVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDTVWKIY 194

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M K G+  N+  +N L+   CK G + +A ++ SEM+   V P++ TYNTLI+ Y + 
Sbjct: 195 KKMVKLGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKK 254

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G      S+ + M   GI  DI TYN+LI G C+EG+ ++A  L +  D   + PN  TY
Sbjct: 255 GMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFR--DIKDVTPNHVTY 312

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++LI G                                   +C+  D D A  +   M E
Sbjct: 313 TSLIDG-----------------------------------YCRVNDLDEALRLKEVMSE 337

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           K + P  I  + +   L   G+   A  L  +M  R + P        IN   + G+  S
Sbjct: 338 KGLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRS 397

Query: 562 G 562
            
Sbjct: 398 A 398



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 93/202 (46%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           + R+A     +M +    P   +CN  +++      +  AL    +M    +  + +T  
Sbjct: 359 RLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYK 418

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++H FCK   I++A E+   M   GF PS  TY+ L+  +C +      +K  + + + 
Sbjct: 419 ALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRR 478

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G+  +V  +  LI  FCK  K+  A R+   MK   +  + V Y +L  GY +VG   + 
Sbjct: 479 GLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVT 538

Query: 388 ASLYEEMLRNGIKVDILTYNAL 409
           + + +EM +  + + +  Y + 
Sbjct: 539 SDILDEMYKKRLMITLKIYRSF 560


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 18/402 (4%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           H+  S ++ T+SI+L    K   ++ +  +L  +                    + C+  
Sbjct: 190 HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM------------------RAKGCEPD 231

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            + +++L     +      A +    +  +G  P   +    L SL  SER       + 
Sbjct: 232 IVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFA 291

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM  N+ +P+  T N ++ + C+ G+++RA++V  +M   G IP + TY++++ G C+ G
Sbjct: 292 EMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVG 351

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A++  + ++  G +P+ I + T++ G C   +   A  + +EM  ++  P+ VT+N
Sbjct: 352 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T+I    Q G  +    + E+M  NG   DI+TYN++I GLC E     A  L+ +L   
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSY 471

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+  T++ L+ G C     E A QL  +M+ S C P+   F  ++++ CQ     +A
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            E L  M E    P+    + +   L   GK + A+KL   M
Sbjct: 532 IETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGM 573



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/364 (24%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           +FD +L+  R C  S + + +L         +R A     +MR  G  P I + N  +++
Sbjct: 184 VFDDMLH--RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           + +   VD AL    ++  +   P+  T   V+ + C     +   E+F  M S    P 
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             T+NT+++  C +GL+  A+K  + M ++G  P+++T+++++ G C  G++ +A  + S
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            +K+    P+ + Y T++ G   +   E    L  EM+ +    D +T+N +I  LC++G
Sbjct: 362 RLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKG 421

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A  +V+ + +N   P+  TY+++I G C  +  + A +L  ++   GC+P+   F 
Sbjct: 422 LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFN 481

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+   C  + ++ A ++++ M+     PD+   + + + L   G    A++  + M   
Sbjct: 482 TLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAEN 541

Query: 538 GLLP 541
           G +P
Sbjct: 542 GCIP 545



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 166/339 (48%), Gaps = 4/339 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L+G+   + ++   +L   ++ S   C    + F+ +  +   +     A     QM 
Sbjct: 377 TVLKGLCSIEQWEHAEELMAEMVCSD--CPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +  L +   +D A+     ++     P++ T N ++   C +   E
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++  NM      P  TT+NT+I+  C KGLL  A++   +M +NG  PN  T+N ++
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               K GK  EA ++ S M  TN +P+++TYNT+I+   + G  E    L   M+ NG+ 
Sbjct: 555 DALLKAGKTQEALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLS 612

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D +TY +L  G+C+E  T +A  ++  L    L P+A+ Y+ ++ G C    ++ A   
Sbjct: 613 PDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDC 672

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           +  M+ SGC P++  + +L+         D A ++L+ +
Sbjct: 673 FAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 155/312 (49%), Gaps = 4/312 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + +L    RV  AL  + +M     SP+V T ++++ A CK     +A+ +   M +
Sbjct: 166 NPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRA 225

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P + TYN LI+  CN+G +  A+   + +  +G +P+ +T+  ++   C   +  E
Sbjct: 226 KGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKE 285

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F+EM +   +P+ VT+NT++    Q G  +    + + M  +G   DI+TY++++ 
Sbjct: 286 VEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILD 345

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+   A  L+  L      P+   Y+ ++ G C  +  E A +L   M+ S C P
Sbjct: 346 GLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP 405

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL--HHCGKDELAMK 529
           ++  F  ++++ CQ    DRA +V+ +M E    PD +  + +  GL    C  D  AM+
Sbjct: 406 DEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDD--AME 463

Query: 530 LFRKMEIRGLLP 541
           L   ++  G  P
Sbjct: 464 LLSNLQSYGCKP 475



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 163/334 (48%), Gaps = 2/334 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A +   +++ YG  P   +    L  L   E+ + A     EM  +   P+  T N
Sbjct: 352 RVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFN 411

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            V+ + C+ G+++RA++V + M   G  P + TYN++I G CN+  +  AM+  + ++  
Sbjct: 412 TVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSY 471

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G +P+++TFNTL+ G C   +  +A ++   M  ++  P+  T+NT+I    Q G     
Sbjct: 472 GCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
               + M  NG   +  TYN ++  L K GKT++A  L+  +   +  P+  TY+ +I+ 
Sbjct: 532 IETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT--PDLITYNTVISN 589

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                  E A  L + M+ +G  P+   +  L    C+ +  DRA  +L  + +  ++PD
Sbjct: 590 ITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPD 649

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   +++  G     + ++A+  F  M   G +P
Sbjct: 650 ATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMP 683



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 154/358 (43%), Gaps = 54/358 (15%)

Query: 225 LPIIESCNKFLSSLL------DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           LP++  CN  +  L       D+ERV   LG          S  V T N +++ +C+ G 
Sbjct: 96  LPVV-PCNILIKRLCSGGRVADAERVFATLG---------ASATVVTYNTMVNGYCRAGR 145

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           IE A  +   M    F P   T+N LI   C +G +  A+   + M   G  P+V+T++ 
Sbjct: 146 IEDARRLISGMP---FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSI 202

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG----------- 387
           L+   CK     +A  +  EM+A    P++VTYN LIN     G+ +             
Sbjct: 203 LLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHG 262

Query: 388 ------------------------ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
                                     L+ EM  N    D +T+N ++  LC++G   +A 
Sbjct: 263 CKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAI 322

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +V  + ++  +P+  TYS+++ G C     + A +L   +   GC+P+   +  ++   
Sbjct: 323 KVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGL 382

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C  E ++ A E++ EM+     PD +  + + + L   G  + A+K+  +M   G  P
Sbjct: 383 CSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNP 440


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 210/457 (45%), Gaps = 26/457 (5%)

Query: 105 TPFRVKHVL--LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           TP +   V+  L+ + D VL+  +F  +   K    T  T+ I++  L +       + +
Sbjct: 42  TPIKESDVVMRLRTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYL 101

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRM------------------CDSSPLVFDLLFKTYA 204
           L+  +  +       LF +++ +YR                   C  +  +++ L     
Sbjct: 102 LQQ-MKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAML 160

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
              +F+     +  M+  G  P + + N  L +L  + RVD A     EM      P+V 
Sbjct: 161 SENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVV 220

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           +   V+ +  KLG +E A E+     S+ F P+V+ YN LI+G C +  +         M
Sbjct: 221 SYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQM 275

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + GI PNVIT++T+I      G +  A  ++++M     SPNV T+ +L+ GY   G  
Sbjct: 276 VEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRV 335

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
               +++  M   G + +++ YN LI GLC  GK  +A  +   +++N   PN STY AL
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGAL 395

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G     +   A +++  M+ +GC PN  ++  +++  C++  F +A  ++ +M     
Sbjct: 396 IDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNC 455

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P+++  +    GL   G+ E A+ LF +ME  G  P
Sbjct: 456 PPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 184/380 (48%), Gaps = 7/380 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ +  ++  D   KL   +  S + C+   + +  +  + +   K   A +   +   
Sbjct: 190 LLKALCKNNRVDGACKLL--VEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIR--- 244

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             F P +   N  ++      +V        +M    I PNV T + V+ +   +G +E 
Sbjct: 245 --FQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVEL 302

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ V+  M   G  P+V T+ +L+ G+  +G +  A+   N M + G +PNV+ +NTLI 
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIH 362

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  GK+ EA  + S+M+    SPNV TY  LI+G+ + G+    + ++ +M+ NG   
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y +++  LC+     +A  L++ +  ++  PN  T++  I G C     E A  L+
Sbjct: 423 NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLF 482

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M + GC PN   +  ++    +      A E++ EM EK M  + +  + ++ G  + 
Sbjct: 483 CQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNV 542

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK E A+KL  KM + G+ P
Sbjct: 543 GKFEEALKLLGKMLVGGVKP 562



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 163/344 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V++ L   +    K +       QM + G  P + + +  +SSL     V++AL  + +M
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKM 310

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                SPNVYT   +M  +   G +  A+ ++  M   GF P+V  YNTLI G C+ G +
Sbjct: 311 FVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKM 370

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+   + ME+NG  PNV T+  LI GF K G L  A+ I+++M      PNVV Y ++
Sbjct: 371 GEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSM 430

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +N   +        SL E+M  +    + +T+N  I GLC  G+ + A  L   +++   
Sbjct: 431 VNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGC 490

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY+ ++ G       + A +L   M   G   N   +  +   FC    F+ A +
Sbjct: 491 SPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALK 550

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +L +ML   + PD+I  + L       GK + A++L  K+   G
Sbjct: 551 LLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGG 594



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 1/335 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  +   F  L K Y  R +   A + + +M + GF P + + N  +  L    ++  
Sbjct: 313 RGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE 372

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+    +M RN  SPNV T   ++  F K G +  A E++  M + G IP+V  Y ++++
Sbjct: 373 AVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVN 432

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C   + S A      M  +   PN +TFNT I G C  G++  A  +F +M+    SP
Sbjct: 433 VLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSP 492

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+ TYN +++G  +    +    L  EM   G++++++TYN +  G C  GK ++A  L+
Sbjct: 493 NIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLL 552

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQ 485
             +    + P+A TY+ L    C++   + A QL   +   G   P    +  L+   C 
Sbjct: 553 GKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICN 612

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
               + A   L +ML + +  ++   + L  GL +
Sbjct: 613 QIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFN 647


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 163/316 (51%), Gaps = 3/316 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I + N  +++   + R+  A  F ++M+   I+P+V T N+++   CK G +E A+E+
Sbjct: 167 PDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEI 226

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M+  G +P V TYN++I   C  G +  A +    M      P+++TFNTL+ GFCK
Sbjct: 227 LDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCK 283

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G L  A  +  EM   N+ P+V+TY  L+NG  +VG  ++   L EE++R G   D++ 
Sbjct: 284 AGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIA 343

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y +L+ GLCK G+ ++A  LVK++           YS+L++G C   N  +A ++   M+
Sbjct: 344 YTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
                P    + +++    ++    +A  ++ +++ +   PD +  + L  GL    +  
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 526 LAMKLFRKMEIRGLLP 541
            A  L  +M  RG  P
Sbjct: 464 EACDLADEMASRGCFP 479



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 159/318 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  L     +  +  AL   +EM R  I P+V T  ++++  C++G ++ A  +
Sbjct: 269 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 328

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            + +   G+IP V  Y +L+ G C  G +  A K    M   G +  V+ +++L+ G+C+
Sbjct: 329 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G +H+A  I +EM + N+ P + TYN ++ G  + G+     SL  +++  G   D++T
Sbjct: 389 AGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 448

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI GLCK  + ++A  L  ++      PN  T  +++ G C     + A+ L   M 
Sbjct: 449 YNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS 508

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           R    PN  ++  L+   C+++  D A  VL  M  + +A D     +L   + H G+  
Sbjct: 509 RKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVA 568

Query: 526 LAMKLFRKMEIRGLLPKG 543
            AM ++ +M  RG LP G
Sbjct: 569 EAMAMYDEMVARGFLPDG 586



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 197/426 (46%), Gaps = 25/426 (5%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKN-RKFKSSESILRGILDSDSFDLPSKLFD 180
           L+++FF W          + +++ +L IL K+   F++                  K++ 
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTG-----------------KVYK 51

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            +L+S   C  + + F +L +      +   A +    + ++   P +   N  +  L  
Sbjct: 52  DLLHS--GCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFK 109

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF--IPSV 298
               D A+  ++ M  +R+ P + T N V+   CK G +E+A E+ + M   G    P +
Sbjct: 110 DGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDI 169

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYNTLI+       +  A  F+  M+  GI P+V+T N L+ G CK G + EA  I   
Sbjct: 170 VTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDG 229

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           MK     P+V+TYN++I+     G     A + + M       D++T+N L+ G CK G 
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGM 286

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  +++++ + +++P+  TY+ L+ G C     + AF L + ++R G  P+   +  
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+   C++ + + A +++ EM  +      ++ S L SG    G    A ++  +M    
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406

Query: 539 LLPKGF 544
           ++P  F
Sbjct: 407 MVPPLF 412



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 170/360 (47%), Gaps = 41/360 (11%)

Query: 241 SERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           S R D+A+ F+     ++    +V++ N ++    K G   R  +V+K++   G  P++ 
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV 63

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T+  LI G+C  G    A++F   +++  + P+V  FN LI G  K G   +A ++F  M
Sbjct: 64  TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN---------------------- 397
           +++ V P +VTYNT+I+G  + GN E    L EEM+R                       
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 398 ---------------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                          GI  D+LT N L+ G+CK+G  ++A  ++  +     VP+  TY+
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ++I   CV      A ++ K+M    C P+   F  L+  FC+     RA EVL EM  +
Sbjct: 244 SIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + PD I  + L +GL   G+ ++A  L  ++  +G +P        ++   ++GE E  
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEA 360



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 120/268 (44%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G++P + +    +  L  S  ++ A    KEM        V   + ++  +C+ G + +A
Sbjct: 336 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKA 395

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            E+   M S+  +P + TYN ++ G    G +S A+   + +   G  P+V+T+NTLI G
Sbjct: 396 REILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDG 455

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK  ++ EA  +  EM +    PN VT  +++ G  +VG  +   SL  EM R     +
Sbjct: 456 LCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPN 515

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ Y +LI GLCK  +   A  ++  +    +  +   Y  LI           A  +Y 
Sbjct: 516 VVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYD 575

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            M+  G  P+    + L      N  F+
Sbjct: 576 EMVARGFLPDGSTSKTLEEAAMSNSVFE 603



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/238 (22%), Positives = 98/238 (41%), Gaps = 2/238 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  S   +   KL   +  S R C +  +++  L   Y        A +   +M 
Sbjct: 346 SLVDGLCKSGEIEEAHKLVKEM--SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
               +P + + N  L  L+    +  A+    ++      P+V T N ++   CK   + 
Sbjct: 404 SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVR 463

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++   M S G  P+  T  +++ G C  G +  A      M +    PNV+ + +LI
Sbjct: 464 EACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            G CK  ++ +A  +   M+   V+ +   Y  LI      G      ++Y+EM+  G
Sbjct: 524 DGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARG 581


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 214/480 (44%), Gaps = 54/480 (11%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           K+L  L   L P  V  V++  QKD  L+  FFTW       S T+ T+++++  L   +
Sbjct: 138 KQLERLKFKLNPGLVCDVVVN-QKDLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQ 196

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           +  +   IL  +   +   +   L  S+L                 +T+        A +
Sbjct: 197 ETDAVVQILTAMW-KEGHRISMHLLTSLL-----------------RTFGSTNNVSGALE 238

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
            F QM+ +G  P     N  L  L+       A+  + ++ + RI P+  T  + +H+F 
Sbjct: 239 IFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFN 298

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           + G ++ A E  + M   G  P V T+  LI      G +  A KF N M+     PNV+
Sbjct: 299 RSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVV 358

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ TL+ G  K G+L EA  +F EMK  N SP+ + YNTLI+G G+ G ++M   L++EM
Sbjct: 359 TYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEM 418

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G+  ++ TYN +I  L K G+  +A  L  DL +   VP+  TY+ LI         
Sbjct: 419 KDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQM 478

Query: 455 ERAFQLYKSMIRSG--CRPNKH-----------------------------IFEMLMSTF 483
           ++   + K M+  G  C  ++                               +  LMS F
Sbjct: 479 DKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAF 538

Query: 484 CQNEDFDRAAEVLLEMLEK--CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             N   D A + LLE+++K  C+ P  +  + L  GL   G+ + A+ L R+ME +G  P
Sbjct: 539 IHNGHVDEAVK-LLEVMKKHECI-PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEP 596



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 174/353 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L        +   A     +M   G  P + + +  ++S    ++ + +L
Sbjct: 559 CIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESL 618

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM R     +V T ++V++  CK   +++A++VF  M+  G  P +  Y TL+S  
Sbjct: 619 SLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL 678

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  A++  N ++++ + P+   +N ++ G  K  ++ EA ++   MK  N+ P++
Sbjct: 679 VKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDL 738

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY +L++G G+ G  E   +++ +M   G + D++ Y +L+  L K GK   A  + + 
Sbjct: 739 FTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRA 798

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K   VP+  TYS+LI         E A+  +++ I  GC PN  ++  L+ +F +   
Sbjct: 799 MAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            DRA E+  EM  +   P+ +  + L SGL   G+  +A KL  +ME  G +P
Sbjct: 859 VDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVP 911



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 181/402 (45%), Gaps = 37/402 (9%)

Query: 178  LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
            LFD ++    + D S   + L+            A D F +M++ G  P++ +    LSS
Sbjct: 620  LFDEMVRKGCVADVS--TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSS 677

Query: 238  LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF---------CKL------------ 276
            L+  E++D AL  + E++ + + P+ +  N++++           CKL            
Sbjct: 678  LVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737

Query: 277  --------------GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
                          G +E A  +F  M   G  P V  Y +L+      G LS A+    
Sbjct: 738  LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797

Query: 323  LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
             M K    P+V+T+++LI    K+G++ EA   F    +   +PNV  Y++LI+ +G+ G
Sbjct: 798  AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKG 857

Query: 383  NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              +    L+EEM R     +I+TYN L+ GL K G+   A  L+++++K   VP+  TY+
Sbjct: 858  MVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYN 917

Query: 443  ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             LI G       + A   +K M   G  P+   F  L+ +  + +    A E+   M E+
Sbjct: 918  ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977

Query: 503  CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               P  +  + L   L   GK   A  +F +M+++G +P G 
Sbjct: 978  GYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGI 1019



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/414 (25%), Positives = 194/414 (46%), Gaps = 33/414 (7%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++  ++ S + D   K F+  + + R C  + + +  L    A   +   A + F +M++
Sbjct: 328 LIDALVKSGNIDEACKFFNG-MKNLR-CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P   + N  +  L  +   D+A G +KEM+   + PN+ T N+++    K G    
Sbjct: 386 NNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPE 445

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNG------------ 328
           A ++F +++  G +P V TYNTLI      G +   +   K ++EK G            
Sbjct: 446 AWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505

Query: 329 ---IQ--------PNV-------ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              I+        P++       IT+NTL+  F   G + EA ++   MK     P VVT
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT 565

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TL++G G+ G  +   SL  EM + G +  ++TY++L+    K  + +++  L  ++ 
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +   V + STYS +I   C   + ++A  ++  M   G  P    ++ L+S+  ++E  D
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            A ++  E+ E  + PD+ + + + +GL    + + A KL   M+ + +LP  F
Sbjct: 686 FALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLF 739



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 171/353 (48%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ S + +  L  ++  R +   +   F +M   G +  + + +  ++ L  S+ VD AL
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M+   + P +     ++ +  K   I+ A+++F  ++    +P    YN +++G 
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                +  A K  + M+   I P++ T+ +L+ G  K G+L EA  +F++M      P+V
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y +L++  G+ G       ++  M +     D++TY++LI  L KEG+ ++A Y  ++
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
                  PN   YS+LI     +   +RA +L++ M R  C PN   +  L+S   +   
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A ++L EM +    PD +  + L  G+   G  + A   F++M+ +G++P
Sbjct: 894 LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 171/384 (44%), Gaps = 31/384 (8%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L        +   A   F +M+D G +P + + N  +S L  + R   A 
Sbjct: 388 CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM------------------- 289
             + +++     P+V+T N ++    K G +++ + + K M                   
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEG 507

Query: 290 -----------ESMGFIP-SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
                       S+GF      TYNTL+S   + G +  A+K   +M+K+   P V+T+ 
Sbjct: 508 TIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYT 567

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ G  K G+L EA  +  EM+     P+VVTY++L+  + +    E   SL++EM+R 
Sbjct: 568 TLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+ TY+ +I  LCK     +A  +   + +  + P    Y  L++     +  + A
Sbjct: 628 GCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFA 687

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            Q++  +  S   P+  ++ ++++   ++   D A +++  M  + + PD    + L  G
Sbjct: 688 LQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDG 747

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ E A  +F KM   G  P
Sbjct: 748 LGKSGRLEEAFNMFTKMTEEGHEP 771



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 126/252 (50%)

Query: 208  KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
            K  +A   F  M     +P + + +  + SL    RV+ A  F++       +PNV   +
Sbjct: 788  KLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYS 847

Query: 268  MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             ++ +F K G+++RA+E+F+ M+     P++ TYN L+SG    G L++A K    MEK 
Sbjct: 848  SLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKV 907

Query: 328  GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            G  P+++T+N LI G  K G + EA   F  MK   + P+V+T+ +LI   G+V      
Sbjct: 908  GCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEA 967

Query: 388  ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
              L++ M   G    ++TYN LI  L + GK  +AA +  ++     +P+  T   +   
Sbjct: 968  CELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRI 1027

Query: 448  QCVRKNSERAFQ 459
              VR+    A +
Sbjct: 1028 LSVREQQFHALE 1039



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 133/277 (48%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N +M AF   G ++ AV++ + M+    IP+V TY TL+ G    G L  A+     M
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           EK G +P+V+T+++L+  F K+ +  E+  +F EM       +V TY+ +IN   +  + 
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDV 649

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    ++  M   G++  +  Y  L+  L K+ K   A  +  +L ++SLVP+   Y+ +
Sbjct: 650 DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIM 709

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G       + A +L  SM      P+   +  L+    ++   + A  +  +M E+  
Sbjct: 710 VNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGH 769

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            PD +  + L   L   GK   A+ +FR M  +  +P
Sbjct: 770 EPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVP 806



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 93/186 (50%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            C  +  V+  L  ++  +     A + F +M+     P I + N  LS L  + R+++A 
Sbjct: 839  CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAE 898

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +EM +    P++ T N+++    K+G+++ A   FK M+  G +P V T+ +LI   
Sbjct: 899  KLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESL 958

Query: 309  CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                 L  A +  + ME+ G  P+V+T+N LI    + GK+HEA  IF EMK     P+ 
Sbjct: 959  GKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDG 1018

Query: 369  VTYNTL 374
            +T   +
Sbjct: 1019 ITIGIM 1024



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 118/259 (45%), Gaps = 4/259 (1%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+  +V TY  +I            ++    M K G + ++    +L+  F     +  A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             IF++MK+   +P+   YN ++    + G       ++ ++ +  I+ D  T+   +  
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             + G+   AA  ++++ K+ + P   T++ LI       N + A + +  M    C PN
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L++   +    + A EV +EM E   +PD+I  + L  GL   G+ ++A  LF+
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416

Query: 533 KMEIRGLLPKGFDKLRTIN 551
           +M+ RGL+P     LRT N
Sbjct: 417 EMKDRGLVP----NLRTYN 431



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/304 (20%), Positives = 130/304 (42%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +++  S  V T  +++         +  V++   M   G   S+    +L+    +   +
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S A++  N M+  G  P+   +N ++    K G  H A  +F ++    + P+  T+   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + + G  +  A   +EM+++GI   + T+  LI  L K G   +A      +     
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY+ L+ G       E A +++  M  + C P+   +  L+    +  + D A  
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           +  EM ++ + P+    + + S L   G+   A +LF  ++ +G +P  F     I+   
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 555 ENGE 558
           + G+
Sbjct: 474 KGGQ 477


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 181/354 (51%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           ++   + ++++++       K   +A D + QM      P + + N  +S      +++ 
Sbjct: 195 KLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY 254

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  + +M++  I+PNVYT N+++  FCK G +  A  V   M      P V TYN+L+ 
Sbjct: 255 AIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMD 314

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+   ++ A    + M   G+  NV  + T++ GFCK   + EA  +F EM+   + P
Sbjct: 315 GYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIP 374

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NVVTY++LI+G  ++G       L +EM   G   +I+TY++++  LCK     KA  L+
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALL 434

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +L    + P+  TY+ LI G C     E A  +++ ++  G   + + + +++  FC  
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             FD+A  +L +M +    P++     +   L    +++ A KL R+M +RGLL
Sbjct: 495 GFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + F+ L K    +     A     ++   GF     S    ++ L    R+  AL   
Sbjct: 130 TAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLL 189

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K +    + PN    NM++   CK  ++  A +++  M +    P V TYN LISG    
Sbjct: 190 KRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAV 249

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             L+ A+   N M+K  I PNV TFN L+ GFCK+GK+++A  + + M   ++ P+VVTY
Sbjct: 250 SKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTY 309

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+L++GY  +        +++ M   G+  ++  Y  ++ G CK     +A  L +++  
Sbjct: 310 NSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRC 369

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             ++PN  TYS+LI G C       A +L   M   G  PN   +  ++   C+N   D+
Sbjct: 370 RKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDK 429

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           A  +L  + ++ + PD    + L  GL   G+ E A  +F  + ++G
Sbjct: 430 AIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 165/312 (52%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + ++  ++ V+ A   Y +M   RI P+V+T N ++  F  +  +  A+++F  M+ 
Sbjct: 205 NMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKK 264

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P+V T+N L+ G C +G ++ A     +M K+ I+P+V+T+N+L+ G+C   K+++
Sbjct: 265 ENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNK 324

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  IF  M +  V  NV  Y T++NG+ ++   +   +L+EEM    I  +++TY++LI 
Sbjct: 325 AKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLID 384

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK G+   A  LV ++      PN  TYS+++   C   + ++A  L  ++   G RP
Sbjct: 385 GLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRP 444

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           + + + +L+   CQ+   + A  V  ++L K    D    + +  G    G  + A+ L 
Sbjct: 445 DMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALL 504

Query: 532 RKMEIRGLLPKG 543
            KME  G +P  
Sbjct: 505 SKMEDNGCIPNA 516



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 35/345 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK LSSL+ ++    AL  +++M  N I  + +T N++++ F +LG+   +  +F  +  
Sbjct: 65  NKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILK 124

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG----------------------- 328
            G+ P+  T+NTLI G C KG +  A+ F + +   G                       
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 184

Query: 329 ------------IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                       +QPN + +N +I   CK   +++A  ++S+M A  + P+V TYN LI+
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALIS 244

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  V        L+ +M +  I  ++ T+N L+ G CKEGK   A  ++  + K+ + P
Sbjct: 245 GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++L+ G C      +A  ++ SM   G   N  I+  +++ FC+ +  D A  + 
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLF 364

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            EM  + + P+ +  S L  GL   G+   A+KL  +M  RG  P
Sbjct: 365 EEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 9/303 (2%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P  +  N ++ +  K      A+ + + ME  G      T+N LI+     GL SL+  
Sbjct: 58  TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               + K G  P  ITFNTLI G C KG +H+A     ++ A     + V+Y TLING  
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +VG       L + +    ++ + + YN +I  +CK      A  L   +    + P+  
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVF 237

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ALI+G         A  L+  M +    PN + F +L+  FC+    + A  VL  M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTI 550
           ++  + PD +  + L  G     K   A  +F  M   G++           GF K++ +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357

Query: 551 NCA 553
           + A
Sbjct: 358 DEA 360



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 35/214 (16%)

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI------------------- 403
           N +P    +N +++   +  +     SL+++M  NGI+ D                    
Sbjct: 56  NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115

Query: 404 ----------------LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
                           +T+N LI GLC +G   +A +    +       +  +Y  LI G
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C       A QL K +     +PN  ++ M++   C+ +  + A ++  +M+ K + PD
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + L SG     K   A+ LF KM+   + P
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINP 269


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 3/348 (0%)

Query: 193 PLVFDLLFKTYAHRKKFRN---ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           P +     +T++ ++   N     D FC+M     LP I   +K LS +  S+  D+ + 
Sbjct: 31  PFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVIS 90

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +  M    I  ++Y+ N+V++  C+      A+ V   M   G+ P V T ++LI+G C
Sbjct: 91  LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A+   + ME+ G +P+V+ +NT+I G CK G +++A  +F  M+   V  + V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN+L+ G    G     A L  +M+   I  +++T+ A+I    KEGK  +A  L +++
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +  + P+  TY++LI G C+    + A Q+   M+  GC P+   +  L++ FC+++  
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           D   ++  EM ++ +  D+I  + +  G    G+ + A ++F +M+ R
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 36/391 (9%)

Query: 187 RMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           +M  S PL     F  +    A  K +      F  M   G    + S N  ++ L    
Sbjct: 59  KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R  IAL    +M +    P+V T++ +++ FC+   +  A+++   ME MGF P V  YN
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T+I G C  GL++ A++  + ME++G++ + +T+N+L+ G C  G+  +A R+  +M   
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           ++ PNV+T+  +I+ + + G       LYEEM R  +  D+ TYN+LI GLC  G+  +A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------------- 468
             ++  +     +P+  TY+ LI G C  K  +   +L++ M + G              
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358

Query: 469 ------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                              RPN   + +L+   C N   ++A  +   M +  +  D   
Sbjct: 359 YFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +  G+   G  E A  LFR +  +GL P
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 202/458 (44%), Gaps = 55/458 (12%)

Query: 129 WVQTH--KPSSLTLETHSIVLHILTKNRKFKSS---ESILRGILDSDSFDLPSKLFDSI- 182
           W +T   K SS+ LE    +   + ++R   S      +L  I  S ++DL   LF  + 
Sbjct: 37  WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96

Query: 183 -------LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
                  LYSY          +++        +F  A     +M  +G+ P + + +  +
Sbjct: 97  VCGIGHDLYSY----------NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           +      RV  A+    +M      P+V   N ++   CK+G++  AVE+F  ME  G  
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
               TYN+L++G C  G  S A +    M    I PNVITF  +I  F K+GK  EA ++
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           + EM    V P+V TYN+LING    G  +    + + M+  G   D++TYN LI G CK
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326

Query: 416 EGKTKKAAYLVKDLDKNSLV--------------------------------PNASTYSA 443
             +  +   L +++ +  LV                                PN  TYS 
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI 386

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           L+ G C+    E+A  L+++M +S    +   + +++   C+  + + A ++   +  K 
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + PD +  + + SG     + + +  L+RKM+  GLLP
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 101/214 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ F+ ++    K         +F  M+   +  ++ +YN +IN   +     +  S+
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + D++T ++LI G C+  +   A  LV  +++    P+   Y+ +I G C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                 A +L+  M R G R +   +  L++  C +  +  AA ++ +M+ + + P+ I 
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + +       GK   AMKL+ +M  R + P  F
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 206/416 (49%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T+S V+H L K R    +E+ LR +++     LP    +++++Y
Sbjct: 246 FKEMVQRGIPPDLV--TYSSVVHALCKARAMGKAEAFLRQMVNKGV--LPDNWTYNNLIY 301

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
                             Y+   +++ A   F +MR +  LP + + N  + SL    ++
Sbjct: 302 G-----------------YSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++  ++++ +   G +    ++F  M   G  P + T++ L
Sbjct: 345 KEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+   Y+ LI G+   G+      L  E++ NG+++DI+ ++++I  LCK G+   A  
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N    P+A  YS L+ G C+    E+A +++ +M+ +G  PN  ++  L++ +
Sbjct: 525 IF-DLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML+K + P +I+ + +  GL   G+   A   F +M   G+
Sbjct: 584 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGI 639



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 162/345 (46%), Gaps = 2/345 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      + +L K+   + K   A D    M + G +  P + +    +        V+ 
Sbjct: 182 CVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNK 241

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T + V+HA CK   + +A    + M + G +P   TYN LI 
Sbjct: 242 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIY 301

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M ++ I P+V+T N L+   CK GK+ EA  +F  M     +P
Sbjct: 302 GYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNP 361

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +Y  ++NGY   G       L++ ML +GI  DI T++ LI      G   KA  + 
Sbjct: 362 DVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIF 421

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY+ +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 422 NEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTH 481

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
               +A E++LE++   M  D +  S + + L   G+   A  +F
Sbjct: 482 GSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIF 526



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 168/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   YA +    + TD F  M   G  P I + +  + +  +   +D A+  + EMR
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+V T   V+ A C++G ++ A+E F  M   G  P    Y+ LI G C  G L 
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    +  NG++ +++ F+++I   CK G++ +A  IF         P+ V Y+ L+
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLM 545

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ +++ Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 546 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 605

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   Y+ +I G  V   +  A   +  M  SG   NK  + +++  F +N  FD A  +
Sbjct: 606 PSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFL 665

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  D I L+ + +G+    + E A  LF  +   GL+P
Sbjct: 666 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 711



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 176/400 (44%), Gaps = 16/400 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++SI+L  L    K   ++ +LR + +  +   P    D + Y+         V D  FK
Sbjct: 188 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSP----DVVAYT--------TVIDCFFK 235

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                     A D F +M   G  P + + +  + +L  +  +  A  F ++M    + P
Sbjct: 236 ----EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLP 291

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + +T N +++ +   G  + AV VFK M     +P V T N L+   C  G +  A    
Sbjct: 292 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVF 351

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G  P+V ++  ++ G+  KG L +   +F  M    ++P++ T++ LI  Y   
Sbjct: 352 DTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANC 411

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +    ++ EM  +G+K D++TY  +I  LC+ GK   A      +    + P+   Y
Sbjct: 412 GMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 471

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             LI G C   +  +A +L   ++ +G R +   F  +++  C+      A  +    + 
Sbjct: 472 HCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN 531

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               PD+++ S L  G    GK E A+++F  M   G+ P
Sbjct: 532 VGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEP 571



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 169/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      + +  +++ C +       + R ++A
Sbjct: 87  CGSGPALAVALFNRAASRAQGPRVLSPT-----SHTYAILMDCCTR-------AHRPELA 134

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  ++   N ++  FC+    + A+++       +G +P V +Y+ L+ 
Sbjct: 135 LAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLK 194

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             C++G    A     +M + G    P+V+ + T+I  F K+G +++A  +F EM    +
Sbjct: 195 SLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGI 254

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTY+++++   +        +   +M+  G+  D  TYN LI G    G+ K+A  
Sbjct: 255 PPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 314

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ ++S++P+  T + L+   C     + A  ++ +M   G  P+   ++++++ + 
Sbjct: 315 VFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYA 374

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +APD    S L     +CG  + AM +F +M   G+ P
Sbjct: 375 TKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ ++I  N L+ GFC+  +  EA + 
Sbjct: 113 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 172

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +Y+ L+      G S     L   M   G     D++ Y  +I  
Sbjct: 173 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDC 232

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TYS+++   C  +   +A    + M+  G  P+
Sbjct: 233 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPD 292

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM    + PD + L+ L   L   GK + A  +F 
Sbjct: 293 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFD 352

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 353 TMAMKGQNPDVF 364



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 2/178 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+ +L   Y    K   A   F  M   G  P +      ++      R+D  L  ++E
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKG 312
           M +  I P+    N+++      G    A   F  M   G   +  TYN ++ G   N+ 
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRC 658

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                  FK L   N ++ ++IT NT+I G  +  ++ EA  +F+ +  + + P VVT
Sbjct: 659 FDEAIFLFKELRAMN-VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 182/382 (47%), Gaps = 18/382 (4%)

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
           N +F  + S+    LD   F+L        L S+  C+        L    A  + +  A
Sbjct: 52  NSQFTEAVSLFHSALD---FNL--------LPSWATCN-------FLVDALARSRNYGLA 93

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              + +M     LP   S +  +    D+++  +  G    + +   + NV+ +N+V+  
Sbjct: 94  FSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKG 153

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            C+ G +  A+ + + M      P + +YNTLI+G C    L  A+     ME  G  PN
Sbjct: 154 LCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPN 213

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
            +T  TL+ G CK G++ EA  +   MK      +VV Y TLI+G+   GN + G  L++
Sbjct: 214 SVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD 273

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EML  GI  +++TY+ L+ GLC+ G+ K+A  ++  + ++ + P+  TY+ LI G C   
Sbjct: 274 EMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDG 333

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            +  A  L   M+  G  P+   + +L+S  C+      A ++L  M+EK    D +  +
Sbjct: 334 RATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYN 393

Query: 513 ELYSGLHHCGKDELAMKLFRKM 534
            L  GL   GK + A+KLF  M
Sbjct: 394 TLMKGLCDKGKVDEALKLFNSM 415



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 2/309 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L  +  V  A+G  +EM R  +SP++ + N +++  CK   ++ AV +   ME+
Sbjct: 148 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 207

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  T  TL+ G C  G +  AM+    M+K G   +V+ + TLI GFC  G L  
Sbjct: 208 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 267

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F EM    +S NVVTY+ L++G  ++G  +   ++   M  +GI  D++TY  LI 
Sbjct: 268 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 327

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK+G+   A  L+  + +    P+  TY+ L++G C       AF++ + MI  G + 
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 387

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEML--EKCMAPDSIILSELYSGLHHCGKDELAMK 529
           +   +  LM   C     D A ++   M   E C+ P+    + L  GL   G+   A+K
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 447

Query: 530 LFRKMEIRG 538
           + RKM  +G
Sbjct: 448 IHRKMVKKG 456



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L       KK + A     +M   G  P   +C   +  L    R+D A+   + M+
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 241

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +     +V     ++  FC  G ++R  E+F  M   G   +V TY+ L+ G C  G   
Sbjct: 242 KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 301

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N M ++GI P+V+T+  LI G CK G+   A  + + M      P+ VTYN L+
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 361

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL--DKNS 433
           +G  + G       +   M+  G K D++TYN L+ GLC +GK  +A  L   +  ++N 
Sbjct: 362 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 421

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  T++ LI G C      +A ++++ M++ G   N   + ML+    +      A 
Sbjct: 422 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 481

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           E+  ++L+    P+S   S L  G        +A  LF +M   GL P  FD
Sbjct: 482 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 4/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G  ++ + D   +LFD +L   +   ++ + +  L        +++ A      M 
Sbjct: 254 TLISGFCNNGNLDRGKELFDEMLG--KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++G  P + +    +  L    R   A+     M      P+  T N+++   CK G++ 
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 371

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM--EKNGIQPNVITFNT 338
            A ++ + M   G    V TYNTL+ G C+KG +  A+K  N M   +N ++PNV TFN 
Sbjct: 372 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 431

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G+L +A +I  +M       N+VTYN L+ G  + G  +    L++++L  G
Sbjct: 432 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              +  TY+ LI G CK      A  L  ++  + L P    Y+ L+   C   + E+A 
Sbjct: 492 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 551

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L++ M  + C P+   F  ++    +  DF    E+ ++M+E  + PD++  S L + L
Sbjct: 552 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 611

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ + A     +M   G  P
Sbjct: 612 SKLGELDEAKSALERMVASGFTP 634



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 154/320 (48%), Gaps = 9/320 (2%)

Query: 248 LGFYKE-------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           LG +KE       M  + I P+V T   ++   CK G    A+++   M   G  PS  T
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM- 359
           YN L+SG C +GL+  A K   +M + G + +V+T+NTL+ G C KGK+ EA ++F+ M 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 360 -KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
                + PNV T+N LI G  + G       ++ +M++ G   +++TYN L+ G  K GK
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 476

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A  L K +     VPN+ TYS LI G C  +    A  L+  M   G  P    +  
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 536

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           LM++ C+    ++A  +  EM      PD I  + +  G    G  +   +L  KM   G
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596

Query: 539 LLPKGFDKLRTINCAPENGE 558
           L P        IN   + GE
Sbjct: 597 LRPDALTFSTLINRLSKLGE 616



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 2/329 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDIALGFY 251
           + ++ L K    + K   A   F  M D      P + + N  +  L    R+  A+  +
Sbjct: 390 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 449

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           ++M +     N+ T NM++    K G I+ A+E++K +  +GF+P+  TY+ LI G C  
Sbjct: 450 RKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKM 509

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
            +L++A      M  +G+ P +  +NTL+   CK+G L +A  +F EM   N  P+++++
Sbjct: 510 RMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISF 569

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT+I+G  + G+ +    L  +M+  G++ D LT++ LI  L K G+  +A   ++ +  
Sbjct: 570 NTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVA 629

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +   P+A  Y +L+ G   + ++     L   M   G   ++ I   +++  C +     
Sbjct: 630 SGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVD 689

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHH 520
             E+L    +      SI  +EL   LH 
Sbjct: 690 VMELLPTFFQGTSEGASISCNELLMQLHQ 718



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 127/281 (45%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+  T N ++ A  +      A  V++ M  +  +PS  + + LI    +     L    
Sbjct: 72  PSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGV 131

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
             L+ K G   NV   N ++ G C+ G + EA  +  EM   +VSP++V+YNTLING  +
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
               +    L  EM   G   + +T   L+ GLCK+G+  +A  L++ + K     +   
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVL 251

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y  LI+G C   N +R  +L+  M+  G   N   +  L+   C+   +  A  VL  M 
Sbjct: 252 YGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 311

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E  + PD +  + L  GL   G+   AM L   M  +G  P
Sbjct: 312 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 167/376 (44%), Gaps = 8/376 (2%)

Query: 82  VNIAYSHLIHSDWKKLTALSTHLTP-FRVKHVL----LKVQKDYVLS-LEFFTWVQTHKP 135
           +N    H IH D    T L   L    R  H +    L V+K    S + +   +     
Sbjct: 307 LNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCK 366

Query: 136 SSLTLETHSIVLHILTKNRKFK--SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
             L ++   I+  ++ K +K    +  ++++G+ D    D   KLF+S+  +    + + 
Sbjct: 367 EGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNV 426

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             F++L        +   A     +M   G    + + N  L   L + ++  A+  +K+
Sbjct: 427 FTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQ 486

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +      PN +T ++++  FCK+ ++  A  +F  M + G  P++  YNTL++  C +G 
Sbjct: 487 VLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGS 546

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A      M     +P++I+FNT+I G  K G       +  +M    + P+ +T++T
Sbjct: 547 LEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFST 606

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   ++G  +   S  E M+ +G   D L Y++L+ GL  +G T +   L+  +    
Sbjct: 607 LINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKG 666

Query: 434 LVPNASTYSALITGQC 449
            V +    S ++T  C
Sbjct: 667 TVLDRKIVSTILTCLC 682



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 77/201 (38%), Gaps = 37/201 (18%)

Query: 343 FCKK--GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            C+K   +  EA  +F      N+ P+  T N L++   +  N  +  S+Y  M      
Sbjct: 47  LCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRM----TH 102

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           VD+L                               P+  + SALI      +  +  F +
Sbjct: 103 VDVL-------------------------------PSFGSLSALIECFADAQKPQLGFGV 131

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              +++ G   N  I  +++   C+N     A  ++ EM  K ++PD +  + L +GL  
Sbjct: 132 VGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCK 191

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
             K + A+ L  +ME  G  P
Sbjct: 192 AKKLKEAVGLLLEMEAAGCFP 212


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 162/312 (51%), Gaps = 2/312 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  ++      RV  AL   +EMR R  I+PN YT   V+  +CK+G ++ AV+VF  M 
Sbjct: 189 NTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEML 248

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           + G + P    YN LI G+C++G L  A+ +++ M + G+   V T+N L+      G+ 
Sbjct: 249 TKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRG 308

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM    ++ +V TYN LING+ + GN +    ++E M R G++  ++TY +L
Sbjct: 309 TEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSL 368

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  L K+G+ ++   L  +  +  + P+   Y+ALI       N +RAF++   M +   
Sbjct: 369 IYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRI 428

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  LM   C     D A +++ EM ++ + PD +  + L SG    G  + A++
Sbjct: 429 APDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALR 488

Query: 530 LFRKMEIRGLLP 541
           +  +M  +G  P
Sbjct: 489 IRNEMMNKGFNP 500



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 151/297 (50%), Gaps = 2/297 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    D  ++D AL +   M    ++  V T N+++HA    G    A E+ + M  
Sbjct: 261 NALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG 320

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G    V TYN LI+GHC +G +  A++    M + G++  V+T+ +LI+   KKG++ E
Sbjct: 321 KGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE 380

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
            +++F E     + P++V YN LIN +   GN +    +  EM +  I  D +TYN L+ 
Sbjct: 381 TDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMR 440

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+  +A  L+ ++ K  + P+  TY+ LI+G  ++ + + A ++   M+  G  P
Sbjct: 441 GLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 500

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
               +  L+   C+N   D A  ++ EM+E  + PD      L  GL    +DE A+
Sbjct: 501 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL--TTEDERAI 555



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 1/328 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D   K+FD +L    +     ++++ L   Y  + K   A     +M 
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEV-KPEAVMYNALIGGYCDQGKLDTALLYRDRMV 284

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + N  + +L    R   A    +EM    ++ +V+T N++++  CK G ++
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVK 344

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+NM   G   +V TY +LI     KG +    K  +   + GI+P+++ +N LI
Sbjct: 345 KALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALI 404

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                 G +  A  I  EM+   ++P+ VTYNTL+ G   +G  +    L +EM + GI+
Sbjct: 405 NSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQ 464

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++TYN LI G   +G  K A  +  ++      P   TY+ALI G C     + A  +
Sbjct: 465 PDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENM 524

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNED 488
            K M+ +G  P+   +  L+      ++
Sbjct: 525 VKEMVENGITPDDSTYISLIEGLTTEDE 552



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 151/332 (45%), Gaps = 76/332 (22%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +F +M  +      TT+N ++   C+ G  + A++    M +    PN +T+NT+I 
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 193

Query: 342 GFCKKGKLHEANRIFSEMKA-TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-I 399
           GFC +G++  A  I  EM+    ++PN  TY T+I+G+ +VG  +    +++EML  G +
Sbjct: 194 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253

Query: 400 KVDILTYNALILGLCKEGKTKKA----------------------------------AY- 424
           K + + YNALI G C +GK   A                                  AY 
Sbjct: 254 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 313

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-------------------- 464
           LV+++    L  +  TY+ LI G C   N ++A +++++M                    
Sbjct: 314 LVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 373

Query: 465 ---------------IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                          +R G RP+  ++  L+++   + + DRA E++ EM +K +APD +
Sbjct: 374 KKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV 433

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + L  GL   G+ + A KL  +M  RG+ P
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKRGIQP 465


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 203/450 (45%), Gaps = 24/450 (5%)

Query: 90  IHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           +  D+    +L TH     V H L K  K  + +++ F    T+   ++ + T++ ++  
Sbjct: 120 MEEDYGVAPSLKTH---NLVLHGLCKSGK-VLAAMDHFETTTTNG-CTIDIHTYTAIVDW 174

Query: 150 LTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF 209
           L KN+K + + +++  I                  +   C  +   ++ L        + 
Sbjct: 175 LAKNKKIQDAVALMEKI------------------TANGCTPTIATYNALLNGLCKMGRL 216

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
             A D   ++ D G  P + +    +  L   +R   A   +KEM    +  +      +
Sbjct: 217 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTAL 276

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +    + G I +A  V+K M S G +P V T +T+I G C  G +  A++    ME  G+
Sbjct: 277 IRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGL 336

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            PN + ++ LI G CK  K+  A  + ++MK    +P+ +TYN LI+G  + G+ E   +
Sbjct: 337 APNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARA 396

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            ++EML  G K D+ TYN L+ G CK G T  A  +  D+  +   PN  TY  LI+G C
Sbjct: 397 FFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLC 456

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R+   +A   ++ M   GC P+  ++  L+   C++   +    +L + +E+    +S 
Sbjct: 457 KRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGC-MLFDEMERSGVANSQ 515

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + L   L    + + A+ LF  +   G+
Sbjct: 516 TRTRLIFHLCKANRVDEAVSLFNAIRKEGM 545



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 165/344 (47%), Gaps = 1/344 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN- 257
           L   +A  K+ R A +         FLP +E+ N  ++    +   + A    +EM  + 
Sbjct: 65  LLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDY 124

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            ++P++ T N+V+H  CK G +  A++ F+   + G    + TY  ++        +  A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +     +  NG  P + T+N L+ G CK G+L EA  +  ++     +P+VVTY +LI+G
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
            G+   S     L++EM   G+ +D + Y ALI GL + GK  +A+ + K +     VP+
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             T S +I G C       A +++KSM   G  PN+ ++  L+   C+    D A E+L 
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +M +    PD+I  + L  GL   G  E A   F +M   G  P
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKP 408



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 175/364 (48%), Gaps = 11/364 (3%)

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           K  A    F   T   C +  + +  I++        L  ++++  A+   +++  N  +
Sbjct: 145 KVLAAMDHFETTTTNGCTIDIHTYTAIVDW-------LAKNKKIQDAVALMEKITANGCT 197

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P + T N +++  CK+G +E A+++ + +   G  P V TY +LI G   +     A K 
Sbjct: 198 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 257

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M   G+  + + +  LI G  + GK+ +A+ ++  M +    P+VVT +T+I+G  +
Sbjct: 258 FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 317

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G       +++ M   G+  + + Y+ALI GLCK  K   A  ++  + K    P+  T
Sbjct: 318 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 377

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ LI G C   + E A   +  M+ +GC+P+ + + +L+S FC+  + D A  V  +M 
Sbjct: 378 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMS 437

Query: 501 EKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
               +P+ +    L SGL  C + +L  A   F+ M+ RG  P  F     ++   ++G+
Sbjct: 438 SSHCSPNVVTYGTLISGL--CKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGK 495

Query: 559 KESG 562
            E G
Sbjct: 496 LEGG 499


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 210/466 (45%), Gaps = 53/466 (11%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           E H+++L    +  K  S  S++     S+  D     F  +   +        ++++L 
Sbjct: 60  ELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLL 119

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           ++    ++    +  +  M   G  P   + N  + +L DS  VD A   + EM      
Sbjct: 120 ESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN +T  +++  +CK G+ ++ +E+  +MES G +P+   YNT++S  C +G    + K 
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKL 239

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----SPNVVTYNTLIN 376
              M + G+ P+++TFN+ I   CK+GK+ +A+RIFS+M+         PN +TYN ++ 
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299

Query: 377 GYGQVGNSEMGASLYE-----------------------------------EMLRNGIKV 401
           G+ +VG  E   +L+E                                   +M+  GI  
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGP 359

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            I +YN L+ GLCK G    A  +V  + +N + P+A TY  L+ G C     + A  L 
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLL 419

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+R+ C PN +   +L+ +         A E+L +M EK    D++  + +  GL  C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL--C 477

Query: 522 GKDEL--AMKLFRKMEIRGLLPKG----------FDKLRTINCAPE 555
           G  EL  A+++ + M + G    G           D L   NC P+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 190/435 (43%), Gaps = 55/435 (12%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           ++L++++I L  L ++ KF  +E++L+ ++D        K     +YSY          +
Sbjct: 324 VSLQSYNIWLQGLVRHGKFIEAETVLKQMID--------KGIGPSIYSY----------N 365

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L           +A      M+  G  P   +    L       +VD A    +EM RN
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
              PN YT N+++H+   +G I  A E+ + M   G+     T N ++ G C  G L  A
Sbjct: 426 NCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485

Query: 318 MKFKNLME-----------------------KNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           ++    M                        +N   P++IT++TL+ G CK G+  EA  
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKT 545

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F+EM    + P+ + YN  I+ + + G       + ++M + G    + TYN+LILGL 
Sbjct: 546 LFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
            + +  +   L+ ++ +  + PN  TY+  I   C     E A  L   M++    PN  
Sbjct: 606 IKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVF 665

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHCGKDELAMKLF 531
            F+ L+  FC+  DFD A EV    +  C   +   S++ +EL +          A +L 
Sbjct: 666 SFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA----------AGQLL 715

Query: 532 RKME-IRGLLPKGFD 545
           +  E +  +L +GF+
Sbjct: 716 KATELLEAVLDRGFE 730



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 191/443 (43%), Gaps = 72/443 (16%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA----------------- 204
           ++R + DS   D   +LFD +    + C  +   F +L + Y                  
Sbjct: 153 LIRALCDSSCVDAARELFDEM--PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMES 210

Query: 205 -----HRKKFRNATDTFC-------------QMRDYGFLPIIESCNKFLSSL------LD 240
                ++  +     +FC             +MR+ G +P I + N  +S+L      LD
Sbjct: 211 FGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270

Query: 241 SERV--DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           + R+  D+ L  Y  + R    PN  T N+++  FCK+G++E A  +F+++     + S+
Sbjct: 271 ASRIFSDMELDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSL 326

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            +YN  + G    G    A      M   GI P++ ++N L+ G CK G L +A  I   
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           MK   VSP+ VTY  L++GY  VG  +   SL +EM+RN    +  T N L+  L   G+
Sbjct: 387 MKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGR 446

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK---------------- 462
             +A  L++ +++     +  T + ++ G C     ++A ++ K                
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506

Query: 463 -------SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
                  S+I + C P+   +  L++  C+   F  A  +  EM+ + + PDS+  +   
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFI 566

Query: 516 SGLHHCGKDELAMKLFRKMEIRG 538
                 GK   A ++ + ME +G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKG 589


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 167/324 (51%), Gaps = 1/324 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           +R  G  P + +    +++   +++++ A+   +EMR     PN+ T N+++ A CKL +
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSM 107

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A +V K M   GF P+V T+N+L+ G C +G +  A K   +M   G++PNV+T++ 
Sbjct: 108 VGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSA 167

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK  K  EA  +  EMKA+ V+P+  TY+ LI+G  +    E    +   M  +G
Sbjct: 168 LIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSG 227

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D++ Y+++I   CK GK  +A   ++++ K    P+  TY+ +I G C       A 
Sbjct: 228 CTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQ 287

Query: 459 QLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +   M  SG   P+   +  +++  C+++    A ++L  M +    PD +  + +  G
Sbjct: 288 VILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDG 347

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L  CG+ E A  L + M+  G  P
Sbjct: 348 LCKCGRLEEAEYLLQGMKRAGCAP 371



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 176/383 (45%), Gaps = 36/383 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           CD + + +  L   +A  KK   A     +MR+ G  P + + N  + +L     V  A 
Sbjct: 53  CDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQ 112

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE---------------------------- 280
              K+M     +PNV T N ++  FCK G ++                            
Sbjct: 113 DVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGL 172

Query: 281 -------RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
                   A EV + M++ G  P   TY+ LI G C    +  A +    M  +G  P+V
Sbjct: 173 CKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDV 232

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + ++++I  FCK GKL EA +   EM+    SP+VVTYNT+I+G  ++G       + ++
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292

Query: 394 MLRNG-IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           M  +G +  D++TY+ +I GLCK     +A  L+  + K    P+  TY+ +I G C   
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A  L + M R+GC PN   +  L+S  C+    D A  V+ EM      P+ +  +
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412

Query: 513 ELYSGLHHCGKDELAMKLFRKME 535
            + +GL   G+ + A +L ++M+
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMK 435



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 159/296 (53%), Gaps = 4/296 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   +EM+    +P+ +T   ++ A    G ++ A++   ++ SMG  P+V TY  LI+
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIA 65

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
                  L  AMK    M + G  PN++T+N L+   CK   +  A  +  +M     +P
Sbjct: 66  AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 125

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV+T+N+L++G+ + GN +    L   M+  G++ +++TY+ALI GLCK  K  +A  ++
Sbjct: 126 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 185

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++  + + P+A TYSALI G C     E A Q+ + M  SGC P+  ++  ++  FC++
Sbjct: 186 EEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 245

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG-LLP 541
                A + L EM ++  +PD +  + +  GL   GK   A  +  +M+  G +LP
Sbjct: 246 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLP 301



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 153/326 (46%), Gaps = 21/326 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S ++  L K++KF  ++ +L      +         D+  YS             L  
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVL------EEMKASGVTPDAFTYSA------------LIH 205

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K   A     +M   G  P +   +  + +   S ++  A    +EMR+ R SP
Sbjct: 206 GLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSP 265

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKF 320
           +V T N V+   CKLG I  A  +   M+  G  +P V TY+T+I+G C   +L  A K 
Sbjct: 266 DVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKL 325

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + M K G  P+V+T+ T+I G CK G+L EA  +   MK    +PNVVTY TLI+G  +
Sbjct: 326 LDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCK 385

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL--DKNSLVPNA 438
               +    + EEM   G   +++TYN ++ GLC  G+ K+A  LV+ +   +    P+A
Sbjct: 386 ARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDA 445

Query: 439 STYSALITGQCVRKNSERAFQLYKSM 464
           +TY  ++         + A QL + M
Sbjct: 446 ATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 3/201 (1%)

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C  G LH A  +  EMK+   +P+  T+  +I      G+ +        M   G   ++
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TY ALI    +  K ++A  L++++ +    PN  TY+ L+   C       A  + K 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           MI  G  PN   F  L+  FC+  + D A ++L  M+ K M P+ +  S L  GL    K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 524 DELAMKLFRKMEIRGLLPKGF 544
              A ++  +M+  G+ P  F
Sbjct: 178 FLEAKEVLEEMKASGVTPDAF 198


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 185/382 (48%), Gaps = 36/382 (9%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           L+ K   + +++++A   F +M D G LP + + N  +     + ++  AL  +  M++ 
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P++ T N ++  +CK G ++ AV+++  M   GF P+V TY TL+ G+  K     A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490

Query: 318 MKFKNLMEKNGIQ-----------------------------------PNVITFNTLIFG 342
               + M++NG+                                    P ++T+N++I G
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           F K G +  A  ++ +M+   + PN++TY + I+GY + G S+M   +  ++ R G++ D
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPD 610

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+ YNALI G C+EG    A  L+  L K+ L PN   Y++LITG       +   + Y+
Sbjct: 611 IVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYE 670

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           SMI+ G   +   +  L+  F ++ +   A E+  EM+ K   PD+   + L  GL   G
Sbjct: 671 SMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSG 730

Query: 523 KDELAMKLFRKMEIRGLLPKGF 544
             + A KL  +M    + P  F
Sbjct: 731 DIDGAKKLLEEMRRLDVRPNVF 752



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 159/323 (49%), Gaps = 10/323 (3%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS-----ERVDIALGFYKE 253
           L + Y  +K F NA     +M+  G      SCN +  ++L +     +RV    G  K 
Sbjct: 477 LMRGYIAKKDFDNAYALLDEMKQNGV-----SCNDYTYNVLINGICMVDRVCEVDGMLKS 531

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                  P + T N +++ F K G++  A  V++ M   G  P++ TY + I G+C  G 
Sbjct: 532 FMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGC 591

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             +A+K  N + + G+QP+++ +N LI GFC++G +  A ++   +    ++PN V YN+
Sbjct: 592 SDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNS 651

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI GY  +   +  +  YE M++ GI  D  TY  LI G  K+G    A  L  ++    
Sbjct: 652 LITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKG 711

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +P+A T++AL  G C   + + A +L + M R   RPN  I+ ML++ + ++     A 
Sbjct: 712 YIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAF 771

Query: 494 EVLLEMLEKCMAPDSIILSELYS 516
            +  EML   + PD      L S
Sbjct: 772 RLHDEMLNMGIQPDDTTYDILVS 794



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 208/444 (46%), Gaps = 27/444 (6%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL-- 174
           QK Y L  +     Q   PS+  L   S+VL  L  +R++K +  +   + DS   D+  
Sbjct: 349 QKAYELCRQMTG--QGLLPSTFEL---SLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFT 403

Query: 175 ----------PSKLFDSILYSYRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
                       KL +++    RM       S   ++ L   Y  +     A   + +M 
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMP 463

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P + +    +   +  +  D A     EM++N +S N YT N++++  C   +++
Sbjct: 464 MEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC---MVD 520

Query: 281 RAVEV---FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           R  EV    K+  S GFIP++ TYN++I+G    G++  A      M + G+ PN+IT+ 
Sbjct: 521 RVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYT 580

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           + I G+C+ G    A ++ ++++   + P++V YN LING+ Q GN      L   +L++
Sbjct: 581 SFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKD 640

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  + + YN+LI G       K+ +   + + K  +V + STY+ LI G     N   A
Sbjct: 641 GLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFA 700

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +LY  M+  G  P+   F  L    C++ D D A ++L EM    + P+  I + L +G
Sbjct: 701 LELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLING 760

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
                K + A +L  +M   G+ P
Sbjct: 761 YLRDCKLQEAFRLHDEMLNMGIQP 784



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 157/357 (43%), Gaps = 37/357 (10%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           DLL +T A     ++A   F +MR  G+       +  +S+ L     + A+  + EM  
Sbjct: 162 DLLIRT-ARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPG 220

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P+     + + A CKLG   RA+ + + M+ +GF     TY T++      G +  
Sbjct: 221 AEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEE 280

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A++  + M   G + +VI   TL+ G+C + ++  A  +F E     + P  V Y  LI 
Sbjct: 281 ALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIR 340

Query: 377 GYGQVGNSEM-----------------------------------GASLYEEMLRNGIKV 401
           G  QVG ++                                       L+EEM  +G+  
Sbjct: 341 GCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLP- 399

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ TYN LI   C+  K ++A  L   + K  + P+ +TY++L+ G C +   + A +LY
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             M   G +PN   +  LM  +   +DFD A  +L EM +  ++ +    + L +G+
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 119/265 (44%), Gaps = 14/265 (5%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLI----SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           A + + +M + G +P + +   L+     G   K  L+L M+    M   G + +   F+
Sbjct: 141 ATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFME----MRGRGYRVDAWMFD 196

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+    K+G   +A R+F EM    + P+   Y   I    ++G+      +  EM   
Sbjct: 197 ALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEV 256

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYL---VKDLDKNSLVPNASTYSALITGQCVRKNS 454
           G      TY  ++  L K G+ ++A  +   ++D  K   V  A+T   L+ G C+R+  
Sbjct: 257 GFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATT---LMRGYCLRQEV 313

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A  L+K  ++ G  P K ++ +L+    Q     +A E+  +M  + + P +  LS +
Sbjct: 314 GNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLV 373

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGL 539
             GL +  + + A+ LF +M   GL
Sbjct: 374 LKGLLNDRRWKDAVCLFEEMADSGL 398



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/222 (21%), Positives = 93/222 (41%)

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G+ P++ +   L+    +     +A  +F EM+      +   ++ L++   + G 
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            E    L++EM    I  D   Y   I  LCK G   +A  +++++ +        TY  
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           ++         E A ++   M  +G + +  +   LM  +C  ++   A  +  E L+  
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           + P  ++   L  G    G  + A +L R+M  +GLLP  F+
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFE 369



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/147 (23%), Positives = 63/147 (42%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V++ L   Y +    +  +  +  M   G +    +    +        V  AL  Y E
Sbjct: 647 VVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSE 706

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+ +T   + H  C+ G I+ A ++ + M  +   P+V  YN LI+G+     
Sbjct: 707 MMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCK 766

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLI 340
           L  A +  + M   GIQP+  T++ L+
Sbjct: 767 LQEAFRLHDEMLNMGIQPDDTTYDILV 793


>gi|297844892|ref|XP_002890327.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336169|gb|EFH66586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 903

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 236/479 (49%), Gaps = 16/479 (3%)

Query: 89  LIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLH 148
           L+   ++ L  LS   +   +  +L +++ +    +E F      +      + +  ++H
Sbjct: 53  LVLGRYEALHDLSLDFSDELLNSILRRLRLNPEACVEIFNLASKQQKFRPDYKAYCKMVH 112

Query: 149 ILTKNRKFKSSESILRGI--LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           IL++ R +  ++S L  +  L+   F     ++  ++  ++    SP VFD++ K YA +
Sbjct: 113 ILSRARNYGQTKSYLCELVALNHSGF----VVWGELVRVFKEFSFSPTVFDMILKVYAEK 168

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
              +NA   F  M  YG +P + SCN  LS+L+      +AL  Y +M    +SP+V+T 
Sbjct: 169 GMVKNALHVFDNMGKYGRIPSLLSCNSLLSNLVKKGENFVALHVYDQMISFEVSPDVFTC 228

Query: 267 NMVMHAFCKLGIIERAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           ++V++A+C+ G +++A+   K M+ S+G   +V T N+LI+G+   G +    +   LM 
Sbjct: 229 SIVVNAYCRCGKVDKAMAFAKEMDNSLGLELNVVTCNSLINGYAMIGDVEGMTRVLRLMS 288

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           + G+  NV+TF +LI  +CKKG + EA ++F  +    + P+   +  LI+GY + G   
Sbjct: 289 ERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNGRIC 348

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               +++ M+  G++ +    N+LI G CK G+  +A  ++  ++  SL P+  TY+ L+
Sbjct: 349 DAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLV 408

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C   + + A +L   M +    P    + +L+  + +   F     +   ML++ + 
Sbjct: 409 DGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVT 468

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
            + I  S L   L   G  + AMKL+  +  RGLL           G  K+  +N A E
Sbjct: 469 ANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 154/340 (45%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L S R    + + F  L K+Y  +     A   F  + +   +P        +     + 
Sbjct: 286 LMSERGVSRNVVTFTSLIKSYCKKGLMEEAEQVFELVTEKKLVPDQHMHGVLIDGYCRNG 345

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+  A+  +  M    +  N    N +++ +CK G +  A ++   M      P   TYN
Sbjct: 346 RICDAVRVHDYMIEMGVRTNTTICNSLINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYN 405

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TL+ G+C  G +  A+K    M +  + P V+T+N L+ G+ + G  H+   ++  M   
Sbjct: 406 TLVDGYCRAGHVDEALKLCGRMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V+ N ++ +TL+    ++G+ +    L+E +L  G+  D +T N +I GLCK  K  +A
Sbjct: 466 GVTANEISCSTLLEALFKLGDFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             ++ +++     P+  TY AL  G     N + AF +   M + G  P   ++  L+S 
Sbjct: 526 KEILDNVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISG 585

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
             + +  ++ A++++E+  + + P       L +G  + G
Sbjct: 586 AFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 134/303 (44%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y    +   A     +M D+   P   + N  +     +  VD AL     M +  
Sbjct: 372 LINGYCKSGQLVEAEQILTRMNDWSLKPDHHTYNTLVDGYCRAGHVDEALKLCGRMCQKE 431

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P V T N+++  + ++G     + ++K M   G   +  + +TL+      G    AM
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLGDFDEAM 491

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K    +   G+  + IT N +I G CK  K++EA  I   +      P+V TY  L +GY
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQALSHGY 551

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
             VGN +   ++ + M + GI   I  YN LI G  K     K A LV +L    L P  
Sbjct: 552 YNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTV 611

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           +TY ALITG C     ++A+     MI  G   N +I   + ++  + + FD A  +L +
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQK 671

Query: 499 MLE 501
           +++
Sbjct: 672 IVD 674



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 168/401 (41%), Gaps = 43/401 (10%)

Query: 187 RMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           RMC      + + +++L K Y+    F +    +  M   G      SC+  L +L    
Sbjct: 426 RMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVTANEISCSTLLEALFKLG 485

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
             D A+  ++ +    +  +  TLN+++   CK+  +  A E+  N+      P V TY 
Sbjct: 486 DFDEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPDVQTYQ 545

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            L  G+ N G L  A   K+ MEK GI P +  +NTLI G  K   L++   +  E++A 
Sbjct: 546 ALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRAR 605

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            ++P V TY  LI G+  +G  +   +   EM+  GI +++   + +   L +  K  +A
Sbjct: 606 GLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEA 665

Query: 423 AYLVK---DLD-----------------------------------KNSLVPNASTYSAL 444
             L++   D D                                   K  LVPN   Y+  
Sbjct: 666 CLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENSTPKKLLVPNNIVYNVA 725

Query: 445 ITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           I G C       A +L+  ++ S    P+++ + +L+     + D ++A  +  EM  K 
Sbjct: 726 IAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKG 785

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + P+ +  + L  GL   G  + A +L RK+  +G  P   
Sbjct: 786 IIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAI 826



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 138/318 (43%), Gaps = 51/318 (16%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P IE  N  +S     + ++       E+R   ++P V T   ++  +C +G+
Sbjct: 567 MEKKGIFPTIEMYNTLISGAFKYKHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626

Query: 279 IERAVEVFKNM--------------------------ESMGFIPSVTTYNTLISGH---- 308
           I++A      M                          E+   +  +  ++ L+ G+    
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLK 686

Query: 309 ---------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
                    C K    +A   +N   K  + PN I +N  I G CK GKL +A ++FS++
Sbjct: 687 EFLEPSATTCLK-TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDL 745

Query: 360 KATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
            +++   P+  TY  LI+G    G+     +L +EM   GI  +I+TYNALI GLCK G 
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIDGDINKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGN 805

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  L++ L +    PNA TY+ LI G     +   A +L + MI  G         +
Sbjct: 806 VDRAQRLLRKLPQKGTTPNAITYNTLIDGLIKSGDVAEAMRLKEKMIEKG---------L 856

Query: 479 LMSTFCQNEDFDRAAEVL 496
           +  ++ Q  D D+  EVL
Sbjct: 857 VRGSYKQG-DVDKPKEVL 873



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 83/390 (21%), Positives = 151/390 (38%), Gaps = 41/390 (10%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L  +     FD   KL++++L    + D+  +  +++       +K   A +   
Sbjct: 473 SCSTLLEALFKLGDFDEAMKLWENVLARGLLTDT--ITLNVMISGLCKMEKVNEAKEILD 530

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +  +   P +++         +   +  A      M +  I P +   N ++    K  
Sbjct: 531 NVNIFRCKPDVQTYQALSHGYYNVGNLKEAFAVKDFMEKKGIFPTIEMYNTLISGAFKYK 590

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +  ++   + + G  P+V TY  LI+G CN G++  A      M + GI  NV   +
Sbjct: 591 HLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICS 650

Query: 338 TLIFGFCKKGKLHEANRI-------------------FSEMKATN--------------- 363
            +     +  K  EA  +                   F E  AT                
Sbjct: 651 KIANSLFRLDKFDEACLLLQKIVDFDLLLPGYQSLKEFLEPSATTCLKTQKIAESVENST 710

Query: 364 ----VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-DILTYNALILGLCKEGK 418
               + PN + YN  I G  + G       L+ ++L +   + D  TY  LI G   +G 
Sbjct: 711 PKKLLVPNNIVYNVAIAGLCKAGKLTDAQKLFSDLLSSDRFIPDEYTYTILIHGCAIDGD 770

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA  L  ++    ++PN  TY+ALI G C   N +RA +L + + + G  PN   +  
Sbjct: 771 INKAFNLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLRKLPQKGTTPNAITYNT 830

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           L+    ++ D   A  +  +M+EK +   S
Sbjct: 831 LIDGLIKSGDVAEAMRLKEKMIEKGLVRGS 860


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 163/332 (49%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A      + D    P +   N  +  L   + V+ A  FY EM    I P+V T + +
Sbjct: 254 RCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTL 313

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  FC  G +  A  +   M      P V TY  LI   C +G L  A     +M K G+
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +PNV+T++TL+ G+C  G++H A +IF  M  T V+P+V +YN +ING  +  + +   +
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMN 433

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L  EML   +  + +TYN+LI GLCK G+   A  L+K+L       +  TY++L+ G C
Sbjct: 434 LLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLC 493

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +N ++A  L+  M   G +PNK+ +  L+   C+      A ++   +L K    D  
Sbjct: 494 KNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVY 553

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + +  GL   G  + A+ +  KME  G +P
Sbjct: 554 TYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP 585



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 169/348 (48%), Gaps = 35/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I    K L SL+  +    A+   K+M    I P++ TL+++++ FC LG +  +  V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 286 FKNMESMGFIPSV-----------------------------------TTYNTLISGHCN 310
              +  +G+ P+                                     +Y TL++G C 
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G    A+K   ++E    +P+V+ +NT+I G CK   ++EA   ++EM +  + P+V+T
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+TLI G+   G      SL  EM    I  D+ TY  LI  LCKEGK K+A  L+  + 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  + PN  TYS L+ G C+      A Q++ +M+++   P+   + ++++  C+ +  D
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A  +L EML K + P+++  + L  GL   G+   A+ L +++  RG
Sbjct: 430 EAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRG 477



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 170/347 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +       K    A D + +M   G  P + + +  +     + ++  A     E
Sbjct: 273 VMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNE 332

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+P+VYT  +++ A CK G ++ A  +   M   G  P+V TY+TL+ G+C  G 
Sbjct: 333 MTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGE 392

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M +  + P+V ++N +I G CK   + EA  +  EM   NV PN VTYN+
Sbjct: 393 VHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNS 452

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L +E+   G   D++TY +L+ GLCK     KA  L   + +  
Sbjct: 453 LIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ALI G C     + A +L++ ++  GC  + + + +++   C+    D A 
Sbjct: 513 IQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEAL 572

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +  +M +    PD++    +   L    +++ A KL  +M  +GLL
Sbjct: 573 AMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 35/380 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +   +L   + H  +   +     ++   G+ P        +  L     V  +L F+ +
Sbjct: 168 VTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDK 227

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       N  +   +++  CK+G    A+++ + +E     P V  YNT+I G C   L
Sbjct: 228 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKL 287

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGF------------------------------ 343
           ++ A  F   M   GI P+VIT++TLI GF                              
Sbjct: 288 VNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTI 347

Query: 344 -----CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                CK+GKL EA  +   M    V PNVVTY+TL++GY  VG       ++  M++  
Sbjct: 348 LIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE 407

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   + +YN +I GLCK     +A  L++++   ++VPN  TY++LI G C       A 
Sbjct: 408 VNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSAL 467

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L K +   G   +   +  L+   C+N++ D+A  + ++M E+ + P+    + L  GL
Sbjct: 468 DLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 527

Query: 519 HHCGKDELAMKLFRKMEIRG 538
               + + A KLF+ + ++G
Sbjct: 528 CKGARLKNAQKLFQHILVKG 547



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 132/288 (45%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R +P++     ++ +  K+     A+ + K ME  G  P + T + LI+
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C+ G ++ +      + K G QPN I   TL+ G C KG++ ++     ++ A     
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V+Y TL+NG  ++G +     L   +     + D++ YN +I GLCK+    +A    
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +++   + P+  TYS LI G C+      AF L   M      P+ + + +L+   C+ 
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKE 355

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
                A  +L  M ++ + P+ +  S L  G    G+   A ++F  M
Sbjct: 356 GKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAM 403



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 130/294 (44%), Gaps = 18/294 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++  L K  K K ++++L G++  +                     + + +  L  
Sbjct: 344 TYTILIDALCKEGKLKEAKNLL-GVMTKEGVK-----------------PNVVTYSTLMD 385

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    +  NA   F  M      P + S N  ++ L   + VD A+   +EM    + P
Sbjct: 386 GYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVP 445

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  T N ++   CK G I  A+++ K +   G    V TY +L+ G C    L  A+   
Sbjct: 446 NTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALF 505

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M++ GIQPN  T+  LI G CK  +L  A ++F  +       +V TYN +I G  + 
Sbjct: 506 MKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKE 565

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           G  +   ++  +M  NG   D +T+  +I  L ++ +  KA  L+ ++    L+
Sbjct: 566 GMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 619



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 117/264 (44%)

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++  AV  F  M  M   PS+  +  ++           A+     ME  GI+P+++T +
Sbjct: 112 VVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLS 171

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI  FC  G++  +  +  ++      PN +   TL+ G    G  +     +++++  
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G +++ ++Y  L+ GLCK G+T+ A  L++ ++  S  P+   Y+ +I G C  K    A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           +  Y  M   G  P+   +  L+  FC       A  +L EM  K + PD    + L   
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   GK + A  L   M   G+ P
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKP 375


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T+S V+H L K R    +E+ LR +++     LP    +++++Y
Sbjct: 244 FKEMVQRGIPPDLV--TYSSVVHALCKARAMDKAEAFLRQMVNKGV--LPDNWTYNNLIY 299

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR    LP + + N  + SL    ++
Sbjct: 300 GY-----------------SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKI 342

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++  ++++ +   G +    ++F  M   G  P + T+N L
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVL 402

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+   Y+ LI G+   G+      L  E++ NG+++DI+ + ++I  LCK G+   A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P+A  Y+ L+ G C+    E+A +++ +M+ +G  PN   +  L++ +
Sbjct: 523 IF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML+K + P +I+ + +  GL   G+   A   F +M   G+
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 165/355 (46%), Gaps = 2/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      +++L K+  ++ K   A D    M + G +  P + + N  +        V+ 
Sbjct: 180 CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK 239

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T + V+HA CK   +++A    + M + G +P   TYN LI 
Sbjct: 240 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIY 299

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M +  I P+V+  NTL+   CK GK+ EA  +F  M     +P
Sbjct: 300 GYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +Y  ++NGY   G       L++ ML +GI  DI T+N LI      G   KA  + 
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIF 419

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +A E++ E++   M  D +    + + L   G+   A  +F      GL P
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 168/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   YA +    + TD F  M   G  P I + N  + +  +   +D A+  + EMR
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+V T   V+ A C++G ++ A+E F  M   G +P    Y+ LI G C  G L 
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + +  NG++ +++ F ++I   CK G++ +A  IF       + P+ V YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ +++ Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   Y+ +I G      +  A   +  M  SG   NK  + +++    +N  FD A  +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  D I L+ + +G+    + E A  LF  +   GL+P
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 171/399 (42%), Gaps = 73/399 (18%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+  + +M 
Sbjct: 399 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMI 458

Query: 256 RNRISPNVYTLNMVMHAFC-----------------------------------KLGIIE 280
              + P+ Y  + ++  FC                                   KLG + 
Sbjct: 459 DQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVM 518

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F    ++G  P    YN L+ G+C  G +  A++  + M   GI+PNV+ + TL+
Sbjct: 519 DAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLV 578

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI- 399
            G+CK G++ E   +F EM    + P+ + YN +I+G  + G +      + EM  +GI 
Sbjct: 579 NGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIA 638

Query: 400 ----------------------------------KVDILTYNALILGLCKEGKTKKAAYL 425
                                             K+DI+T N +I G+ +  + ++A  L
Sbjct: 639 MNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDL 698

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + ++ LVP A TYS +IT        E A  ++ SM  +GC P+  +   ++    +
Sbjct: 699 FASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLK 758

Query: 486 NEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHC 521
             +  RA   L ++ E+  + +   +++L +L+S    C
Sbjct: 759 KNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTC 797



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 168/357 (47%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      Y +  +++ C +       + R ++A
Sbjct: 85  CGSGPALAVALFNRAASRAQGPRVLSPT-----SYTYAILMDCCTR-------AHRPELA 132

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  +    + ++  FC+    + A+++       +G +P V +YN L+ 
Sbjct: 133 LAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLK 192

Query: 307 GHCNKGLLSLAMKFKNLMEKNGI--QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             CN+G    A     +M + G    P+V+ +NT+I GF K+G +++A  +F EM    +
Sbjct: 193 SLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTY+++++   +    +   +   +M+  G+  D  TYN LI G    G+ K+A  
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ + S++P+    + L+   C     + A  ++ +M   G  P+   + ++++ + 
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +APD    + L     +CG  + AM +F +M   G+ P
Sbjct: 373 TKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ + I  + L+ GFC+  +  EA + 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +YN L+      G S     L   M   G     D++ YN +I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TYS+++   C  +  ++A    + M+  G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM  + + PD + L+ L   L   GK + A  +F 
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 351 TMAMKGQNPDVF 362



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 3/241 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+++L   Y    K   A   F  M   G  P +      ++      R+D  L  ++E
Sbjct: 537 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 596

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG-HCNKG 312
           M +  I P+    N+++    + G    A   F  M   G   +  TY+ ++ G   N+ 
Sbjct: 597 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRC 656

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
                  FK L   N ++ ++IT NT+I G  +  ++ EA  +F+ +  + + P  VTY+
Sbjct: 657 FDEAIFLFKELRAMN-VKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYS 715

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDK 431
            +I    + G  E    ++  M   G + D    N ++  L K+ +  +A AYL K  ++
Sbjct: 716 IMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDER 775

Query: 432 N 432
           N
Sbjct: 776 N 776



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 85/192 (44%), Gaps = 10/192 (5%)

Query: 194 LVFDLLF---KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ D LF   +T   + KF   T++   M    +  +       L  L  +   D A+  
Sbjct: 611 IIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV-------LRGLFKNRCFDEAIFL 663

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +KE+R   +  ++ TLN ++    +   +E A ++F ++   G +P   TY+ +I+    
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +GL+  A    + M+  G +P+    N ++    KK ++  A    S++   N S   +T
Sbjct: 724 EGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLT 783

Query: 371 YNTLINGYGQVG 382
              L++ +   G
Sbjct: 784 AMLLVDLFSSKG 795


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/408 (25%), Positives = 185/408 (45%), Gaps = 19/408 (4%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
           T    ++ + T++ ++  L KN+K + + +++  I                  +   C  
Sbjct: 26  TTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI------------------TANGCTP 67

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +   ++ L        +   A D   ++ D G  P + +    +  L   +R   A   +
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           KEM    ++ +      ++    + G I +A  V+K M S G +P V T +T+I G C  
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A++    ME  G+ PN + ++ LI G CK  K+  A  + ++MK    +P+ +TY
Sbjct: 188 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 247

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI+G  + G+     + ++EML  G K D+ TYN LI G CK G T  A  +  D+  
Sbjct: 248 NILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSS 307

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +   PN  TY  LI+G C R+   +A   Y+ M   GC P+  ++  L+   C++   + 
Sbjct: 308 SRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEG 367

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              +L + +E+    +S   + L   L    + + A+ LF  +   G+
Sbjct: 368 GC-MLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM 414



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 140/283 (49%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +E   N  + +++T   ++    K   I+ AV + + + + G  P++ TYN L++G C  
Sbjct: 23  QETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 82

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A+     +  NG  P+V+T+ +LI G  KK +  EA ++F EM +  ++ + V Y
Sbjct: 83  GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI G  Q G     +S+Y+ M   G   D++T + +I GLCK G+   A  + K ++ 
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L PN   YSALI G C  +  + A ++   M ++ C P+   + +L+   C++ D   
Sbjct: 203 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAA 262

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           A     EMLE    PD    + L SG    G  + A  +F  M
Sbjct: 263 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 163/327 (49%), Gaps = 4/327 (1%)

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L  ++++  A+   +++  N  +P + T N +++  CK+G +E A+++ + +   G  P 
Sbjct: 44  LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPD 103

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V TY +LI G   K     A K    M   G+  + + +  LI G  + GK+ +A+ ++ 
Sbjct: 104 VVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYK 163

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M +    P+VVT +T+I+G  + G       +++ M   G+  + + Y+ALI GLCK  
Sbjct: 164 TMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 223

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K   A  ++  + K    P+  TY+ LI G C   +   A   +  M+ +GC+P+ + + 
Sbjct: 224 KMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYN 283

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKME 535
           +L+S FC+  + D A  V  +M     +P+ +    L SGL  C + +L  A   ++ M+
Sbjct: 284 ILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGL--CKRRQLTKASLYYQHMK 341

Query: 536 IRGLLPKGFDKLRTINCAPENGEKESG 562
            RG  P  F     ++   ++G+ E G
Sbjct: 342 ERGCPPDSFVYSSLVDGLCKSGKLEGG 368



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 135/277 (48%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T +++++   K G++ +A  + +   + G    + TY T++        +  A+     +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
             NG  P + T+N L+ G CK G+L EA  +  ++     +P+VVTY +LI+G G+   S
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                L++EM   G+ +D + Y ALI GL + GK  +A+ + K +     VP+  T S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C       A +++KSM   G  PN+ ++  L+   C+    D A E+L +M +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            PD+I  + L  GL   G    A   F +M   G  P
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKP 277



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 114/267 (42%), Gaps = 35/267 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +       ++F S+    R    + +V+  L       +K   A +   QM+
Sbjct: 179 TMIDGLCKAGRIGAAVRIFKSM--EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 236

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P   + N  +  L  S  V  A  F+ EM      P+VYT N+++  FCK G  +
Sbjct: 237 KAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTD 296

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  VF +M S    P+V TY TLISG C +  L+ A  +   M++ G  P+   +++L+
Sbjct: 297 AACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLV 356

Query: 341 FGFCKKGKLHEANRIFSEMKATNVS---------------------------------PN 367
            G CK GKL     +F EM+ + V+                                 P+
Sbjct: 357 DGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPH 416

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEM 394
              YN++I+   + G    G ++Y+EM
Sbjct: 417 PYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 185/399 (46%), Gaps = 5/399 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      +  ++L + +  S +   +S   ++ L      R   +   D   +M +
Sbjct: 247 VITGLTRKGDLEEAAELVEGMRLSKK---ASSFTYNPLITGLLARGCVKKVYDLQLEMEN 303

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + N  +  LL S  V+ A   + EMR   + P+V T N +++ +CK G ++ 
Sbjct: 304 EGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKE 363

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +F ++   G  P+V TYN  I G+C  G L  A   K  M + G  PNV T+  L+ 
Sbjct: 364 ALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMK 423

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G      L  A   F EM +  + P+   YNT I     +G+      L E ++  GI  
Sbjct: 424 GSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISS 483

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D +TYN LI GLCK G  K A  L   +  N L P+  TY+ LI   C R     A +++
Sbjct: 484 DTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIF 543

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            +MI  G  P+   F +++  +C+  +   A     +MLE+ + P+ I  + L   L   
Sbjct: 544 NNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRM 603

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTI--NCAPENGE 558
           G+ +LA   F +M  RGL+   +     I  NC   N E
Sbjct: 604 GRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWE 642



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 168/339 (49%), Gaps = 9/339 (2%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +MR  G LP + + N  L+    +  +  AL  + ++RR  ++P V T N+ +  +C+
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           LG +E A  + + M   G +P+V TY  L+ G  N   L++A +F + M   G+QP+   
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT I      G +  A  +   +    +S + VTYN LI+G  + GN +    L  +M+
Sbjct: 453 YNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMV 512

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            NG++ D +TY  LI   C+ G  ++A  +  ++  + L+P+A T++ +I   C R N  
Sbjct: 513 SNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLY 572

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A+  ++ M+  G  PN+  + +L+   C+      A+    EMLE+ +  +    + L 
Sbjct: 573 SAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLI 632

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP---------KGFD 545
            G    G  E AM+ + +M   G+ P         KGFD
Sbjct: 633 DGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGFD 671



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 187/423 (44%), Gaps = 84/423 (19%)

Query: 203 YAHRKKFRNAT----DTFC-----QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           Y+   K R+AT     T C     +M  +G  P ++ CN  L +L D+ R D     ++E
Sbjct: 135 YSKECKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEE 194

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM--GFIPSVTTYNTLISGHCNK 311
           M +  I P++ T N ++ +F K G  ++   + K ME+   G +P+  TYN +I+G   K
Sbjct: 195 MLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 254

Query: 312 GLLSLAM-------------------------------KFKNL---MEKNGIQPNVITFN 337
           G L  A                                K  +L   ME  GI P V+T+N
Sbjct: 255 GDLEEAAELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYN 314

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            +I G  + G +  A   F+EM+A  + P+V+TYN+L+NGY + GN +    L+ ++ R 
Sbjct: 315 AMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRA 374

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG---------- 447
           G+   +LTYN  I G C+ G  ++A  L +++ +   +PN  TY+ L+ G          
Sbjct: 375 GLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMA 434

Query: 448 --------------QCVRKNSE-----------RAFQLYKSMIRSGCRPNKHIFEMLMST 482
                          C   N+            RA +L + ++  G   +   + +L+  
Sbjct: 435 REFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHG 494

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLL 540
            C+  +   A E+ ++M+   + PD I  + L     HC +  L  A K+F  M   GLL
Sbjct: 495 LCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHA--HCERGLLREARKIFNNMISDGLL 552

Query: 541 PKG 543
           P  
Sbjct: 553 PSA 555



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 120/236 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F +M   G  P   + N  + + L    +  AL   + +    IS +  T N+++H
Sbjct: 434 AREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIH 493

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G ++ A E+   M S G  P   TY  LI  HC +GLL  A K  N M  +G+ P
Sbjct: 494 GLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLP 553

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + +TF  +I  +C++G L+ A   F +M    V PN +TYN LI+   ++G +++ +  +
Sbjct: 554 SAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHF 613

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            EML  G+  +  TY  LI G CK G  + A     ++ +N + P+  T+ AL+ G
Sbjct: 614 HEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKG 669


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 176/382 (46%), Gaps = 34/382 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V++ +  +     K   A   F  M + G  P   +    +       ++D+A  ++ +
Sbjct: 366 FVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNK 425

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    IS  VY+ N +++  CK G ++ A  +FK M   G  P+V TY +LISG+C  GL
Sbjct: 426 MIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGL 485

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A K  + M   GI PN +TF  LI G C+  K+ EA+++F EM    + PN VTYN 
Sbjct: 486 VPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNV 545

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ + GN+     L +EM++ G+  D  TY  LI GLC  G+  +A   + DL    
Sbjct: 546 LIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKH 605

Query: 434 LVPNASTYSALITGQC----------------------------------VRKNSERAFQ 459
              +   Y+AL+ G C                                  + +N    F+
Sbjct: 606 QRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE 665

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M   G +P+  I+ +L+  F ++ +  +A E    M+ +   P+S+  + L +GL 
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLF 725

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
             G    A  LF++M +   +P
Sbjct: 726 KAGYVNEAKLLFKRMLVGEAIP 747



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 231/520 (44%), Gaps = 77/520 (14%)

Query: 98  TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFK 157
           +++S ++ P  V+ VL++   D  L+L FF ++  H+    +  +  I++H L +N  F 
Sbjct: 61  SSISGNIEPHHVEKVLIRTLDDSRLALRFFNFLGLHRNFHHSTASFCILIHSLLQNNLFW 120

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCD-SSPLVFDLLFKTYAHRK--------- 207
            + S+L+ +L       P ++F++   SY+    SS   FD+L + Y   K         
Sbjct: 121 PASSLLQTLLLRGLN--PHQIFENFFESYKKYKFSSSSGFDMLIQHYVQNKRVMDGVLVV 178

Query: 208 --------------------------KFRNATDTF----------------------CQM 219
                                     KFR   + F                      C++
Sbjct: 179 NLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCEL 238

Query: 220 RDY-------------GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +D+             G    I + N F++ L  S+RV  A+   + +    +  ++ T 
Sbjct: 239 KDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTY 298

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
             ++   C++   E  +E+   M  +G++PS    + LI G    G +  A +  N + K
Sbjct: 299 CTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGK 358

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G+ PN+  +N++I   CK GKL EA  +FS M    ++PN VTY  LI+G+G+    ++
Sbjct: 359 LGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDV 418

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
               + +M+  GI   + +YN++I   CK GK K A  L K++    L P  +TY++LI+
Sbjct: 419 AFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLIS 478

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C      +AF+LY  M   G  PN   F  L+   CQ      A+++  EM+E  + P
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538

Query: 507 DSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGF 544
           + +  + L  G  HC  G    A +L  +M  +GL P  +
Sbjct: 539 NEVTYNVLIEG--HCREGNTTRAFELLDEMIKKGLSPDTY 576



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 166/333 (49%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++F    +   +M + G++P   + +  +  L+    ++ A     ++ +  + PN++  
Sbjct: 309 QEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++++ CK G +E A  +F  M   G  P+  TY  LI G   +  L +A  + N M +
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI   V ++N++I   CK GK+  A  +F EM    + P V TY +LI+GY + G    
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              LY EM   GI  + +T+ ALI GLC+  K  +A+ L  ++ +  ++PN  TY+ LI 
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C   N+ RAF+L   MI+ G  P+ + +  L++  C       A E + ++  K    
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRL 608

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           D +  + L  G    G+ + A+   ++M  RGL
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 161/320 (50%), Gaps = 3/320 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P +   N  ++SL  + +++ A   +  M    ++PN  T  +++  F +   ++ A
Sbjct: 360 GVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVA 419

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTLIF 341
              F  M   G   +V +YN++I+  C  G + +A + FK +++K G++P V T+ +LI 
Sbjct: 420 FYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK-GLKPTVATYTSLIS 478

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+CK G + +A +++ EM    ++PN VT+  LI G  Q+      + L++EM+   I  
Sbjct: 479 GYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILP 538

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +TYN LI G C+EG T +A  L+ ++ K  L P+  TY  LI G C       A +  
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             +     R ++  +  L+  FC+      A     EM+ + +  D +  + L SG  + 
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALN- 657

Query: 522 GKDELAMKLFRKMEIRGLLP 541
             D +  +L R+M  +G+ P
Sbjct: 658 QNDRILFELLREMHGKGMQP 677



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 167/382 (43%), Gaps = 41/382 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   +     SKLFD ++    +   + + +++L + +        A +   +M 
Sbjct: 510 ALICGLCQINKMAEASKLFDEMVELKIL--PNEVTYNVLIEGHCREGNTTRAFELLDEMI 567

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM--RRNRISPNVYTLNMVMHAFCKLGI 278
             G  P   +    ++ L  + RV  A  F  ++  +  R+    YT   ++  FCK G 
Sbjct: 568 KKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYT--ALLQGFCKEGR 625

Query: 279 IERAV----------------------------------EVFKNMESMGFIPSVTTYNTL 304
           I+ A+                                  E+ + M   G  P    Y  L
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTIL 685

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G    G L  A +F  +M   G  PN +T+  L+ G  K G ++EA  +F  M     
Sbjct: 686 IDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEA 745

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN +TY   ++   + GN E    L+  ML+ G   + +TYN LI G C+ GK ++AA 
Sbjct: 746 IPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAK 804

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L+  +    +VP+  TYS  I   C R N + A  +++ M++ G +P++ +F  L+   C
Sbjct: 805 LLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACC 864

Query: 485 QNEDFDRAAEVLLEMLEKCMAP 506
            N + DRA ++  +M+ + + P
Sbjct: 865 LNGELDRALQLRNDMMLRGLKP 886



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 3/235 (1%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +EM    + P+     +++  F K G +++A E +  M   G++P+  TY  L++G    
Sbjct: 668 REMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727

Query: 312 GLLSLA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G ++ A + FK ++    I PN IT+   +    K+G +  A ++ + M   + + N VT
Sbjct: 728 GYVNEAKLLFKRMLVGEAI-PNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFA-NTVT 785

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LI GY Q+G  +  A L + M+  G+  D +TY+  I   CK G    A  + + + 
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  L P+   ++ LI   C+    +RA QL   M+  G +P +  +  LM    Q
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQ 900



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 1/213 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +   + S  +  A  F+  M      PN  T   +++   K G +  A  +FK M    
Sbjct: 685 LIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE 744

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            IP+  TY   +     +G +  A++  N M + G   N +T+N LI G+C+ GK  EA 
Sbjct: 745 AIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAA 803

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++   M    + P+ +TY+T I  Y + GN +    ++E ML+ G+K D + +N LI   
Sbjct: 804 KLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHAC 863

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           C  G+  +A  L  D+    L P  STY +L+ 
Sbjct: 864 CLNGELDRALQLRNDMMLRGLKPTQSTYHSLMV 896



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/315 (21%), Positives = 143/315 (45%), Gaps = 13/315 (4%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F++  ++ + S +    +M++  + +   +   V V   M   G +P V T + L++   
Sbjct: 143 FFESYKKYKFSSSS-GFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNA-- 199

Query: 310 NKGLLSLAMKFKNLME------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
               L+   KF+ ++E        G++P+   +  ++   C+    ++A  I ++ +   
Sbjct: 200 ----LARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNG 255

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            S ++VTYN  ING  +         +   +   G+K D++TY  L+LGLC+  + +   
Sbjct: 256 CSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGM 315

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ ++ +   VP+ +  S LI G     + E AF+L   + + G  PN  ++  ++++ 
Sbjct: 316 EMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSL 375

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+    + A  +   M E+ + P+ +  + L  G     K ++A   F KM   G+    
Sbjct: 376 CKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATV 435

Query: 544 FDKLRTINCAPENGE 558
           +     INC  + G+
Sbjct: 436 YSYNSMINCQCKFGK 450



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 105/225 (46%), Gaps = 1/225 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   +      + A + +  M   G++P   +    ++ L  +  V+ A   +K 
Sbjct: 680 VIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKR 739

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T    +    K G +E A+++   M    F  +VT YN LI G+C  G 
Sbjct: 740 MLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSFANTVT-YNILIRGYCQIGK 798

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A K  ++M   G+ P+ IT++T I+ +CK+G +  A  ++  M    + P+ V +N 
Sbjct: 799 FQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNF 858

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           LI+     G  +    L  +M+  G+K    TY++L++ L +  +
Sbjct: 859 LIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 102/229 (44%)

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F+ LI  + +  ++ +   + + M+   + P V T + L+N   ++        L++ ++
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+K D   Y  ++  LC+     KA  ++   + N    +  TY+  I G C  K   
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++ +S+   G + +   +  L+   C+ ++F+   E++ EM+E    P    +S L 
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
            GL   G  E A +L  K+   G++P  F     IN   + G+ E   L
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAEL 386



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 58/115 (50%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ + +++L + Y    KF+ A      M   G +P   + + F+        VD A+  
Sbjct: 781 ANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDM 840

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           ++ M +  + P+    N ++HA C  G ++RA+++  +M   G  P+ +TY++L+
Sbjct: 841 WECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 24/416 (5%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILY 184
           F   VQ   P  L   T+S V+H L K R    +E+ LR +++     LP    +++++Y
Sbjct: 244 FKEMVQRGIPPDLV--TYSSVVHALCKARAMDKAEAFLRQMVNKGV--LPDNWTYNNLIY 299

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            Y                 +   +++ A   F +MR    LP + + N  + SL    ++
Sbjct: 300 GY-----------------SSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKI 342

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +  M     +P+V++  ++++ +   G +    ++F  M   G  P + T+N L
Sbjct: 343 KEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVL 402

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  + N G+L  AM   N M  +G++P+V+T+ T+I   C+ GK+ +A   F++M    V
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+   Y+ LI G+   G+      L  E++ NG+++DI+ + ++I  LCK G+   A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 425 LVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +  DL  N  L P+A  Y+ L+ G C+    E+A +++ +M+ +G  PN   +  L++ +
Sbjct: 523 IF-DLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           C+    D    +  EML+K + P +I+ + +  GL   G+   A   F +M   G+
Sbjct: 582 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 169/346 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   YA +    + TD F  M   G  P+I + N  + +  +   +D A+  + EMR
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + P+V T   V+ A C++G ++ A+E F  M   G +P    Y+ LI G C  G L 
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + +  NG++ +++ F ++I   CK G++ +A  IF       + P+ V YN L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  VG  E    +++ M+  GI+ +++ Y  L+ G CK G+  +   L +++ +  + 
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   Y+ +I G      +  A   +  M  SG   NK  + +++    +N  FD A  +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             E+    +  D I L+ + +G+    + E A  LF  +   GL+P
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 164/355 (46%), Gaps = 2/355 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKFLSSLLDSERVDI 246
           C      +++L K+  ++ K   A D    M + G +  P + + N  +        V+ 
Sbjct: 180 CVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNK 239

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KEM +  I P++ T + V+HA CK   +++A    + M + G +P   TYN LI 
Sbjct: 240 ACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIY 299

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+ + G    A++    M +  I P+V+  NTL+   CK GK+ EA  +F  M     +P
Sbjct: 300 GYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNP 359

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V +Y  ++NGY   G       L++ ML +GI   I T+N LI      G   KA  + 
Sbjct: 360 DVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIF 419

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++  + + P+  TY  +I   C     + A + +  MI  G  P+K+ +  L+  FC +
Sbjct: 420 NEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTH 479

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +A E++ E++   M  D +    + + L   G+   A  +F      GL P
Sbjct: 480 GSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHP 534



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 159/354 (44%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           +C    + ++ +   +        A D F +M   G  P + + +  + +L  +  +D A
Sbjct: 216 VCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKA 275

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
             F ++M    + P+ +T N +++ +   G  + AV VFK M     +P V   NTL+  
Sbjct: 276 EAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGS 335

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  A    + M   G  P+V ++  ++ G+  KG L +   +F  M    ++P 
Sbjct: 336 LCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPV 395

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           + T+N LI  Y   G  +    ++ EM  +G+K  ++TY  +I  LC+ GK   A     
Sbjct: 396 ICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFN 455

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +    +VP+   Y  LI G C   +  +A +L   ++ +G R +   F  +++  C+  
Sbjct: 456 QMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLG 515

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A  +    +   + PD+++ + L  G    GK E A+++F  M   G+ P
Sbjct: 516 RVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/405 (23%), Positives = 175/405 (43%), Gaps = 75/405 (18%)

Query: 192 SPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +P++  F++L K YA+      A   F +MRD+G  P + +    +++L    ++D A+ 
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFC----------------------------------- 274
            + +M    + P+ Y  + ++  FC                                   
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           KLG +  A  +F    ++G  P    YN L+ G+C  G +  A++  + M   GI+PNV+
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVV 572

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            + TL+ G+CK G++ E   +F EM    + P+ + YN +I+G  + G +      + EM
Sbjct: 573 GYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM 632

Query: 395 LRNGI-----------------------------------KVDILTYNALILGLCKEGKT 419
             +GI                                   K+DI+T N +I G+ +  + 
Sbjct: 633 TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRV 692

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           ++A  L   + ++ LVP A TYS +IT        E A  ++ SM  +GC P+  +   +
Sbjct: 693 EEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHV 752

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHC 521
           +    +  +  RA   L ++ E+  + +   +++L +L+S    C
Sbjct: 753 VRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTC 797



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 167/357 (46%), Gaps = 16/357 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C S P +   LF   A R +  R  + T      Y +  +++ C +       + R ++A
Sbjct: 85  CGSGPALAVALFNRAASRAQGPRVLSPT-----SYTYAILMDCCTR-------AHRPELA 132

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLIS 306
           L F+ ++ R  +  +    + ++  FC+    + A+++       +G +P V +YN L+ 
Sbjct: 133 LAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLK 192

Query: 307 GHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             CN+G    A     +M + G    P+V+ +NT+I GF K+G +++A  +F EM    +
Sbjct: 193 SLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGI 252

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P++VTY+++++   +    +   +   +M+  G+  D  TYN LI G    G+ K+A  
Sbjct: 253 PPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVR 312

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + K++ + S++P+    + L+   C     + A  ++ +M   G  P+   + ++++ + 
Sbjct: 313 VFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYA 372

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                    ++   ML   +AP     + L     +CG  + AM +F +M   G+ P
Sbjct: 373 TKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 429



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 3/252 (1%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NR 354
           P+  TY  L+          LA+ F   + + G++ + I  + L+ GFC+  +  EA + 
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILG 412
           +          P+V +YN L+      G S     L   M   G     D++ YN +I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             KEG   KA  L K++ +  + P+  TYS+++   C  +  ++A    + M+  G  P+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  +     +  A  V  EM  + + PD + L+ L   L   GK + A  +F 
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350

Query: 533 KMEIRGLLPKGF 544
            M ++G  P  F
Sbjct: 351 TMAMKGQNPDVF 362


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 161/324 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++  +G  P I S N  L  L  ++R D       EM R    PNV T N ++   C+ G
Sbjct: 203 KLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNG 262

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           + E+  E    M   G  P +  Y T+I G C  G   +A    + M   G++PNV+ +N
Sbjct: 263 LFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 322

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T++ G C   +  EA  + +EM   +   + VT+N L++ + Q G  +    L E+ML +
Sbjct: 323 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 382

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D++TY  +I G CKEG   +A  L+K++      PN  +Y+ ++ G C  +    A
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   MI+ GC PN   F  L++  C+    ++A E+L +ML    +PD I  S +  G
Sbjct: 443 QELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 502

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   GK E A++L   M  +G+ P
Sbjct: 503 LGKAGKTEEALELLNVMINKGITP 526



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 160/323 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D   +M  YG  P +   N  L  L  +ER + A     EM +     +  T N+++ 
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            FC+ G+++R +E+ + M   G IP V TY T+I+G C +GL+  A+     M   G +P
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N I++  ++ G C+  +  +A  + S M      PN VT+NTLIN   + G  E    L 
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELL 481

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           ++ML NG   D+++Y+ +I GL K GKT++A  L+  +    + PN   YS++ +     
Sbjct: 482 KQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
             +++  Q++ S+  +  R +  ++  ++S+ C+  + DRA +    M+     P+    
Sbjct: 542 GRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTY 601

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
           + L  GL   G    A  L  ++
Sbjct: 602 TILIRGLASEGLVREAQDLLSEL 624



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/384 (23%), Positives = 163/384 (42%), Gaps = 2/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L+G+  +  +D   +L   ++     C  +   F+ L         F    +   
Sbjct: 215 SYNAVLKGLCMAKRWDDVEELMVEMVRVG--CPPNVATFNTLIAYLCRNGLFEQVHEALS 272

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM ++G  P +      +  +      ++A      M    + PNV   N V+   C   
Sbjct: 273 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE 332

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             E A ++   M          T+N L+   C  GL+   ++    M ++G  P+VIT+ 
Sbjct: 333 RWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYT 392

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GFCK+G + EA  +   M A    PN ++Y  ++ G  +         L   M++ 
Sbjct: 393 TVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQ 452

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   + +T+N LI  +CK+G  ++A  L+K +  N   P+  +YS +I G      +E A
Sbjct: 453 GCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEA 512

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   MI  G  PN  I+  + S   +    D+  ++   + +  +  D+ + + + S 
Sbjct: 513 LELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISS 572

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L    + + A+  F  M   G +P
Sbjct: 573 LCKRWETDRAIDFFAYMVSNGCMP 596



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/318 (22%), Positives = 128/318 (40%), Gaps = 35/318 (11%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT   ++ + C  G+I  A+ V   M   G   +    + ++   C  G    A+
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +   ++   G   +    N ++   C++G + E   +  ++ +    P++V+YN ++ G 
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALIL--------------------------- 411
                 +    L  EM+R G   ++ T+N LI                            
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 412 --------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
                   G+CK+G  + A  ++  +    L PN   Y+ ++ G C  +  E A  L   
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M +  C  +   F +L+  FCQN   DR  E+L +MLE    PD I  + + +G    G 
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 524 DELAMKLFRKMEIRGLLP 541
            + A+ L + M   G  P
Sbjct: 404 VDEAVMLLKNMSACGCKP 421



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 6/276 (2%)

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           L+ ++ + C  G   R  +  + +++ G    V  YN +I+G+C  G ++ A +    + 
Sbjct: 47  LSALIRSLCAAG---RTADAARALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
              + PN  T+  ++   C +G + +A  +  EM     +      + ++    + G   
Sbjct: 104 ---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                 + +   G  +D    N ++  +C++G   +   L++ L      P+  +Y+A++
Sbjct: 161 SAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVL 220

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C+ K  +   +L   M+R GC PN   F  L++  C+N  F++  E L +M E    
Sbjct: 221 KGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCT 280

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           PD  + + +  G+   G  E+A  +  +M   GL P
Sbjct: 281 PDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKP 316



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/206 (21%), Positives = 89/206 (43%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + ++ K     +++ +A +    M   G LP   + N  ++ +     V+ A+
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              K+M  N  SP++ + + V+    K G  E A+E+   M + G  P+   Y+++ S  
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G     ++  + ++   ++ +   +N +I   CK+ +   A   F+ M +    PN 
Sbjct: 539 SREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNE 598

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEM 394
            TY  LI G    G       L  E+
Sbjct: 599 STYTILIRGLASEGLVREAQDLLSEL 624


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 196/409 (47%), Gaps = 17/409 (4%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           F +   + R +  +   DL  ++F+ +       +S  L F  L  ++A + K   AT  
Sbjct: 103 FWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGF--LVSSFAEKGKLHCATAL 160

Query: 216 FCQMRDYGFLPIIESC----NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
             Q  +      +E C    N  L++L+  +RV+ A+  ++E  R +   +  T N+++ 
Sbjct: 161 LLQSYE------VEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIR 214

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQ 330
             C +G  E+AVE+   M   G +P + TYNTLI G C    L  A + F ++   +G  
Sbjct: 215 GLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCS 274

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+V+T+ ++I G+CK GK+ EA+ +  +M    + P  VT+N L++GY + G       +
Sbjct: 275 PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEI 334

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M+  G   D++T+ +LI G C+ G+  +   L ++++   + PNA TYS LI   C 
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCK 394

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                +A +L   +      P   ++  ++  FC+    + A  ++ EM +K   PD I 
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKIT 454

Query: 511 LSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + L  G  HC K  +  A+ +F KM   G  P        ++C  + G
Sbjct: 455 FTILIIG--HCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501


>gi|357167657|ref|XP_003581270.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Brachypodium distachyon]
          Length = 560

 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 167/326 (51%), Gaps = 7/326 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKE-MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           NK ++S +   RV  A+  ++  ++    SP+V++ N+ +   C++G +++A+E+ + M 
Sbjct: 196 NKLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMA 255

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI-QPNVITFNTLIFGFCKKGKL 349
             G  P   T N L+ G C    +S   +    ++++G+  PNV+T+ ++I G+CK G++
Sbjct: 256 EFGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRM 315

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  ++++M     +PN VTYN LINGYG+ GN     ++Y++M+      D++T++ L
Sbjct: 316 EDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTL 375

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSG 468
           I G C+ G+   A     ++ +  + PNA T+S +I   C +  S  A +  K + +R+ 
Sbjct: 376 IDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAEALRFLKELNMRTD 435

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDEL 526
             P   I   ++   C+    D A  +L+EM  K   PD    + L  G  HC  G+   
Sbjct: 436 IAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILIIG--HCMKGRISE 493

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINC 552
           A+  F KM   G  P        I C
Sbjct: 494 AITFFNKMVDTGCSPDSITVNSFIGC 519



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 148/302 (49%), Gaps = 2/302 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
            + P + S N  +  +     V  AL   + M     SP+  T N+++   C++  + R 
Sbjct: 223 AYSPDVWSFNVAIKGVCQVGDVQKALELVERMAEFGCSPDTVTNNILVGGLCRVKEVSRG 282

Query: 283 VEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            EV + ++  G  +P+V TY ++ISG+C  G +  AM   N M   G  PN +T+N LI 
Sbjct: 283 REVLRRLQRDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLIN 342

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G+ K G +  A  ++ +M      P+VVT++TLI+GY + G  +     + EM +  I+ 
Sbjct: 343 GYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQP 402

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLD-KNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +  T++ +IL  CK+ ++ +A   +K+L+ +  + P A   + +I   C     + A  +
Sbjct: 403 NAHTFSIIILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLI 462

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M   GCRP+K+ + +L+   C       A     +M++   +PDSI ++     L  
Sbjct: 463 LMEMEGKGCRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLK 522

Query: 521 CG 522
            G
Sbjct: 523 AG 524



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 111/227 (48%), Gaps = 1/227 (0%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           RD   +P + +    +S    S R++ A+  Y +M     +PN  T N++++ + K G +
Sbjct: 291 RDGVCMPNVVTYTSVISGYCKSGRMEDAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNM 350

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             AV V++ M      P V T++TLI G+C  G L  AM+    M +  IQPN  TF+ +
Sbjct: 351 GSAVAVYQQMILRRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSII 410

Query: 340 IFGFCKKGKLHEANRIFSEMKA-TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           I  FCK+ +  EA R   E+   T+++P     N +I+   + G  +    +  EM   G
Sbjct: 411 ILSFCKQNRSAEALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKG 470

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            + D  TY  LI+G C +G+  +A      +      P++ T ++ I
Sbjct: 471 CRPDKYTYTILIIGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFI 517



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/328 (23%), Positives = 135/328 (41%), Gaps = 47/328 (14%)

Query: 258 RISPN-VYTLNMVMHAFCKLGIIERAVEVFKNMES--MGFIPSVTTYNTLISGHCNKGLL 314
           R++P+ V     + HA C        +++F  + S  +   PS  +Y  +IS  C     
Sbjct: 82  RLAPSPVAAAAALRHAPCA----SSTLQLFSALHSSQLAIPPSAHSYRYVISMLCQSSRH 137

Query: 315 SLAMK-FKNLMEKNGIQPNVITFNTLIFGFCK-KGKLHEANRIFSEMKATNVSPNVVTYN 372
           + A+K F  + +++G  PN   F + + G C   G L  A  + S+            YN
Sbjct: 138 TDALKLFDQMTDQSGHFPNA-RFLSFLAGSCANAGFLDAAAALLSKAPQFGCCVEAYAYN 196

Query: 373 TLIN------------------------------------GYGQVGNSEMGASLYEEMLR 396
            L+N                                    G  QVG+ +    L E M  
Sbjct: 197 KLMNSFIGCGRVQDAVALFEGWIQGGAYSPDVWSFNVAIKGVCQVGDVQKALELVERMAE 256

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL-VPNASTYSALITGQCVRKNSE 455
            G   D +T N L+ GLC+  +  +   +++ L ++ + +PN  TY+++I+G C     E
Sbjct: 257 FGCSPDTVTNNILVGGLCRVKEVSRGREVLRRLQRDGVCMPNVVTYTSVISGYCKSGRME 316

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  +Y  MI  G  PN   + +L++ + +  +   A  V  +M+ +   PD +  S L 
Sbjct: 317 DAMAVYNDMIGCGTTPNAVTYNVLINGYGKAGNMGSAVAVYQQMILRRCPPDVVTFSTLI 376

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            G   CG+ + AM+ + +M    + P  
Sbjct: 377 DGYCRCGQLDDAMRTWTEMSQYQIQPNA 404



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 75/171 (43%), Gaps = 1/171 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + F  L   Y    +  +A  T+ +M  Y   P   + +  + S     R   
Sbjct: 363 RRCPPDVVTFSTLIDGYCRCGQLDDAMRTWTEMSQYQIQPNAHTFSIIILSFCKQNRSAE 422

Query: 247 ALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           AL F KE+  R  I+P  +  N V+   CK G ++ A  +   ME  G  P   TY  LI
Sbjct: 423 ALRFLKELNMRTDIAPRAFICNPVIDVLCKGGKVDEANLILMEMEGKGCRPDKYTYTILI 482

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            GHC KG +S A+ F N M   G  P+ IT N+ I    K G   E +RI 
Sbjct: 483 IGHCMKGRISEAITFFNKMVDTGCSPDSITVNSFIGCLLKAGMPSEVDRIM 533


>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 209/459 (45%), Gaps = 40/459 (8%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L   S  ++P  V  VL K+    V++L FF W +  K    + E ++ ++  L K ++F
Sbjct: 102 LNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQF 161

Query: 157 KSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           K   +++     +G+L  ++F L S+                         YA  +K + 
Sbjct: 162 KMIWNLVNDMRSKGLLTQETFALISR------------------------RYARARKVKE 197

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +TF +M  +G  P++   N+ L +L  S  V+ A   + +M+  +  P++ +  +++ 
Sbjct: 198 AVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLE 257

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            + +   + R  EV++ M+  GF P   TY  LI+ HC       A++  + ME N   P
Sbjct: 258 GWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMP 317

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
               + TLI G   + +L EA + F   KA+  +P   TYN ++  Y Q    +    + 
Sbjct: 318 TPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIV 377

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCV 450
           +EM + G+     TY+ ++  L K  +TK+A  + + +       P+ STY  ++   C 
Sbjct: 378 DEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCN 437

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +  + A +++  M   G  P  H+F  L+++ C     D A +   EML+  + P + +
Sbjct: 438 EERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAM 497

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT 549
            S L   L   GK ++ + L +K+          DK+RT
Sbjct: 498 FSNLKQTLLDEGKQDMVLILAQKL----------DKIRT 526


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 166/339 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +    +  R +   A     +M   G+ P I + +  L+    S+R+  A+    +M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+ +T   ++H          AV +   M   G  P + TY T+++G C +G + 
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+   N ME   I+ NV+ FNT+I   CK   +  A  +F+EM+   + PNVVTYN+LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N     G     + L   ML   I  +++T+NALI    KEGK  +A  L +++ + S+ 
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI G C+    + A Q++K M+   C PN   +  L++ FC+ +  +   E+
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             EM ++ +  +++  + +  G    G  + A  +F++M
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 164/337 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+  +A     QM + G+ P   +    +  L    +   A+    +M +  
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++ T   V++  CK G I+ A+ +   ME+     +V  +NT+I   C    + +A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ME  GI+PNV+T+N+LI   C  G+  +A+R+ S M    ++PNVVT+N LI+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       L+EEM++  I  D +TYN LI G C   +  +A  + K +     +PN 
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M + G   N   +  ++  F Q  D D A  V  +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           M+   +  D +  S L  GL   GK + A+ +F+ ++
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 194/416 (46%), Gaps = 19/416 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSSPLV 195
           L T+SI ++   +  +   + ++L  ++    + D   L S L +   +S R+ D+  LV
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS-LLNGYCHSKRISDAVALV 176

Query: 196 FDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
             ++          F T  H      K   A     QM   G  P + +    ++ L   
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
             +D+AL    +M   RI  NV   N ++ + CK   +E AV++F  ME+ G  P+V TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N+LI+  CN G  S A +  + M +  I PNV+TFN LI  F K+GKL EA ++  EM  
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            ++ P+ +TYN LING+      +    +++ M+      +I TYN LI G CK  + + 
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
              L +++ +  LV N  TY+ +I G     + + A  ++K M+ +    +   + +L+ 
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
             C     D A  +   + +  M  +  I + +  G+   GK   A  LF  + I+
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 5/391 (1%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKF 209
           R F S+    R IL +   D+  K+ D++     M  S P    + F+ L    A   KF
Sbjct: 41  RSFASASGDYREILRNRLSDII-KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
                   QM+  G    + + + F++      ++ +AL    +M +    P++ TL+ +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           ++ +C    I  AV +   M  MG+ P   T+ TLI G       S A+   + M + G 
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QP+++T+ T++ G CK+G +  A  + ++M+A  +  NVV +NT+I+   +  + E+   
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ EM   GI+ +++TYN+LI  LC  G+   A+ L+ ++ +  + PN  T++ALI    
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                  A +L++ MI+    P+   + +L++ FC +   D A ++   M+ K   P+  
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             + L +G   C + E  ++LFR+M  RGL+
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLV 430



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 34/391 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      DL   L +  + + R+  ++ ++F+ +  +    +    A D F +M 
Sbjct: 228 TVVNGLCKRGDIDLALNLLNK-MEAARI-KANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + N  ++ L +  R   A      M   +I+PNV T N ++ AF K G + 
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + M      P   TYN LI+G C    L  A +    M      PN+ T+NTLI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK  ++ +   +F EM    +  N VTY T+I G+ Q G+ +    ++++M+ N + 
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKN---------------------------- 432
            DI+TY+ L+ GLC  GK   A  + K L K+                            
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525

Query: 433 ----SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
               S+ P+  TY+ +I+G C ++  + A  L++ M   G  PN   +  L+    ++ D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
              +AE++ EM       D+  +S + + LH
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNMLH 616



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 151/304 (49%)

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L D  +VD A+  + +M ++R  P++   N ++ A  K+   E  + + + M+++G    
Sbjct: 58  LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TY+  I+  C +  LSLA+     M K G +P+++T ++L+ G+C   ++ +A  +  
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +M      P+  T+ TLI+G      +    +L ++M++ G + D++TY  ++ GLCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
               A  L+  ++   +  N   ++ +I   C  ++ E A  L+  M   G RPN   + 
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++  C    +  A+ +L  MLEK + P+ +  + L       GK   A KL  +M  R
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357

Query: 538 GLLP 541
            + P
Sbjct: 358 SIDP 361



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 4/227 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +   K+  +  + F +M   G +    +    +     +   D A   +K+M 
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            NR+  ++ T ++++H  C  G ++ A+ +FK ++      ++  YNT+I G C  G + 
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    +L     I+P+V+T+NT+I G C K  L EA+ +F +MK     PN  TYNTLI
Sbjct: 521 EAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
               +  +    A L +EM  +G   D  T  +L+  +  +G+  K+
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 107/227 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ FN L+    K  K      +  +M+   +S ++ TY+  IN + +     +  ++
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + DI+T ++L+ G C   +   A  LV  + +    P+  T++ LI G  +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M++ GC+P+   +  +++  C+  D D A  +L +M    +  + +I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + +   L      E+A+ LF +ME +G+ P        INC    G
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 14/154 (9%)

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y E+LRN +  DI+             K   A  L  D+ K+   P+   ++ L++    
Sbjct: 50  YREILRNRLS-DII-------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK 95

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               E    L + M   G   + + + + ++ FC+      A  VL +M++    PD + 
Sbjct: 96  MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           LS L +G  H  +   A+ L  +M   G  P  F
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 192/384 (50%), Gaps = 2/384 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+     F    +LFD ++   R C      +  +        +   A   F +M 
Sbjct: 50  TLINGLGKVGKFAQAVELFDDMVA--RGCQPDDYTYTTIINGLCKIGETALAAGLFKKME 107

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G    + + +  + SL    RV+ AL  +  M+   ISP ++T   ++   C     +
Sbjct: 108 EAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWK 167

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +   M S+  +P+V T+N L+   C +G +  A      M + G++P+V+T+N+L+
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLM 227

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           +G+    ++ EA ++F  M      P+V +Y+ LINGY +    +    L+ EM+  G  
Sbjct: 228 YGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + ++YN LI GLC+ G+ ++A  L K++  N  +PN  TY+ L+ G C +    +AF+L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +++M  +  +PN  ++ +L++  C++ +   A E+  E+    + P+  I + + +GL  
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK 407

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF 544
            G  + A++ FR ME  G  P  F
Sbjct: 408 EGLLDEALEAFRNMEDDGCPPDEF 431



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 167/319 (52%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P   + N  ++     +RVD+      +  +  + P + T   +++   K+G   +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           VE+F +M + G  P   TY T+I+G C  G  +LA      ME+ G Q NV+T++TLI  
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK  +++EA  IFS MKA ++SP + TY +LI G       +  ++L  EM    I  +
Sbjct: 125 LCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPN 184

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+N L+   CKEGK   A  ++K + +  + P+  TY++L+ G  +      A +L+ 
Sbjct: 185 VVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFD 244

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI  GC+P+   + +L++ +C+ +  D A ++  EM+ +   P+++  + L  GL   G
Sbjct: 245 VMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLG 304

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +   A  LF+ M   G LP
Sbjct: 305 RLREAQDLFKNMHTNGNLP 323



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 175/380 (46%), Gaps = 2/380 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+       L + LF  +      C  + + +  L  +    ++   A D F  M+
Sbjct: 85  TIINGLCKIGETALAAGLFKKM--EEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMK 142

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P I +    +  L +  R   A     EM    I PNV T N+++  FCK G + 
Sbjct: 143 AKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVL 202

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  V K M  MG  P V TYN+L+ G+     +  A K  ++M   G +P+V +++ LI
Sbjct: 203 AAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILI 262

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+CK  ++ EA ++F+EM     +PN V+YNTLI+G  Q+G       L++ M  NG  
Sbjct: 263 NGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNL 322

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ TY  L+ G CK+G   KA  L + +    L PN   Y+ L+   C   N + A +L
Sbjct: 323 PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAREL 382

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G +PN  I+  +++  C+    D A E    M +    PD    + +  G   
Sbjct: 383 FSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQ 442

Query: 521 CGKDELAMKLFRKMEIRGLL 540
              +  A+ L  +M  RG +
Sbjct: 443 HKDESRAVHLIGEMRDRGFI 462



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 13/341 (3%)

Query: 214 DTFCQMR--DYGF-----------LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           + FCQ++  D GF            P I +    ++ L    +   A+  + +M      
Sbjct: 18  NCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQ 77

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+ YT   +++  CK+G    A  +FK ME  G   +V TY+TLI   C    ++ A+  
Sbjct: 78  PDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDI 137

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + M+   I P + T+ +LI G C   +  EA+ + +EM + N+ PNVVT+N L++ + +
Sbjct: 138 FSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCK 197

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G       + + M   G++ D++TYN+L+ G     +  +A  L   +      P+  +
Sbjct: 198 EGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFS 257

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C  K  + A QL+  MI  G  PN   +  L+   CQ      A ++   M 
Sbjct: 258 YSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMH 317

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                P+    + L  G    G    A +LFR M+   L P
Sbjct: 318 TNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/263 (31%), Positives = 123/263 (46%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ME  G  P+  T N LI+  C    + L         K G+QP ++TF TLI G  K GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             +A  +F +M A    P+  TY T+ING  ++G + + A L+++M   G +++++TY+ 
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI  LCK  +  +A  +   +    + P   TY++LI G C     + A  L   M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             PN   F +L+ TFC+      A  VL  M E  + PD +  + L  G     +   A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 529 KLFRKMEIRGLLPKGFDKLRTIN 551
           KLF  M  +G  P  F     IN
Sbjct: 241 KLFDVMITKGCKPDVFSYSILIN 263



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 141/299 (47%), Gaps = 18/299 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T ++++    K  K  ++E +L+ + +    +     ++S++Y Y M            +
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTEM-GVEPDVVTYNSLMYGYSMWT----------E 235

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
               RK F       C+       P + S +  ++    ++R+D A   + EM     +P
Sbjct: 236 VVEARKLFDVMITKGCK-------PDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTP 288

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  + N ++H  C+LG +  A ++FKNM + G +P++ TY  L+ G C +G L  A +  
Sbjct: 289 NNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLF 348

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+   ++PN++ +N L+   CK G L +A  +FSE+    + PNV  Y T+ING  + 
Sbjct: 349 RAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKE 408

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           G  +     +  M  +G   D  +YN +I G  +     +A +L+ ++     + +A T
Sbjct: 409 GLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%)

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           +G  PN     +L++ FCQ +  D    VL + ++  + P  +  + L +GL   GK   
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           A++LF  M  RG  P  +     IN   + GE
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGE 95


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 178/360 (49%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + H  +F +A   F +M     LP I    + L++  +  R +  + F ++M    IS +
Sbjct: 46  FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           +Y+  +++H FC+   +  A+ V   M  +G+ PS+ T+ +L+ G C    +  A     
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
           LM K+G +PNV+ +NTLI G CK G+L+ A  + +EM+   +  +VVTYNTL+ G    G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                A +  +M++  I  D++T+ ALI    K+G   +A  L K++ ++S+ PN  TY+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           ++I G C+      A + +  M   GC PN   +  L+S FC+    D   ++   M  +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
               D    + L  G    GK  +A+ +F  M  R + P        ++    NGE ES 
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 181/386 (46%), Gaps = 11/386 (2%)

Query: 154 RKFKSSESILR-GILDSDSFDLPSKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKK 208
           R F      LR G L S  F+    LF      + M  S PL     F  L    A+ ++
Sbjct: 33  RAFSDYREKLRTGFLHSIRFEDAFALF------FEMVHSQPLPSIVDFTRLLTATANLRR 86

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           +        +M  YG    + S    +       R+  AL    +M +    P++ T   
Sbjct: 87  YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++H FC +  I  A  +   M   G+ P+V  YNTLI G C  G L++A++  N MEK G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           +  +V+T+NTL+ G C  G+  +A R+  +M   +++P+VVT+  LI+ + + GN +   
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            LY+EM+++ +  + +TYN++I GLC  G+   A      +      PN  TY+ LI+G 
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C  +  +   +L++ M   G   +   +  L+  +CQ      A ++   M+ + + PD 
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386

Query: 509 IILSELYSGLHHCGKDELAMKLFRKM 534
           I    L  GL   G+ E A+  F  M
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDM 412



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 153/309 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V++ L        +   A +   +M   G    + + N  L+ L  S R   A    ++
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I+P+V T   ++  F K G ++ A E++K M      P+  TYN++I+G C  G 
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K  +LM   G  PNV+T+NTLI GFCK   + E  ++F  M     + ++ TYNT
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY QVG   +   ++  M+   +  DI+T+  L+ GLC  G+ + A     D+ ++ 
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
                  Y+ +I G C     E+A++L+  +   G +P+   + +++   C+N     A 
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476

Query: 494 EVLLEMLEK 502
           E++  M E+
Sbjct: 477 ELIRRMKEE 485



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 149/307 (48%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           K  +  L S R + A   + EM  ++  P++     ++ A   L   E  +   + ME  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G    + ++  LI   C    LS A+     M K G +P+++TF +L+ GFC   ++ +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +   M  +   PNVV YNTLI+G  + G   +   L  EM + G+  D++TYN L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G+   AA +++D+ K S+ P+  T++ALI     + N + A +LYK MI+S   PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  +++  C +     A +    M  K   P+ +  + L SG       +  MKLF+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 533 KMEIRGL 539
           +M   G 
Sbjct: 341 RMSCEGF 347



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 161/351 (45%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L   +    +  +A      M   G+ P +   N  +  L  +  ++IAL 
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM +  +  +V T N ++   C  G    A  + ++M      P V T+  LI    
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A +    M ++ + PN +T+N++I G C  G+L++A + F  M +    PNVV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLI+G+ +    + G  L++ M   G   DI TYN LI G C+ GK + A  +   +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               + P+  T+  L+ G CV    E A   +  M  S        + +++   C+ +  
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           ++A E+   +  + + PD+   + +  GL   G    A +L R+M+  G++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +  + ++ L     +  ++ +A      M      P + +    +   +    +D A   
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           YKEM ++ + PN  T N +++  C  G +  A + F  M S G  P+V TYNTLISG C 
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
             ++   MK    M   G   ++ T+NTLI G+C+ GKL  A  IF  M +  V+P+++T
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +  L++G    G  E     +++M  +   + I+ YN +I GLCK  K +KA  L   L 
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPN 472
              + P+A TY+ +I G C       A +L + M   G  C+ N
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 14/272 (5%)

Query: 178 LFDSILYSYRMCDSSPLVFDL--------------LFKTYAHRKKFRNATDTFCQMRDYG 223
           L   + YS R  D++ ++ D+              L   +  +     A + + +M    
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
             P   + N  ++ L    R+  A   +  M      PNV T N ++  FCK  +++  +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++F+ M   GF   + TYNTLI G+C  G L +A+     M    + P++IT   L+ G 
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C  G++  A   F +M+ +     +V YN +I+G  +    E    L+  +   G+K D 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            TY  +ILGLCK G  ++A  L++ + +  ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 94/200 (47%)

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF    +  +A  +F EM  +   P++V +  L+     +   E      ++M   GI  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ ++  LI   C+  +   A  ++  + K    P+  T+ +L+ G C+      AF L 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M++SG  PN  ++  L+   C+N + + A E+L EM +K +  D +  + L +GL + 
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+   A ++ R M  R + P
Sbjct: 225 GRWSDAARMLRDMMKRSINP 244



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 4/205 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G+          K FD  L + + C  + + ++ L   +   +        F +M 
Sbjct: 286 SIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF   I + N  +       ++ +AL  +  M   R++P++ T  +++H  C  G IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403

Query: 281 RAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            A+  F +M ES  +I  +  YN +I G C    +  A +    +   G++P+  T+  +
Sbjct: 404 SALVKFDDMRESEKYI-GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462

Query: 340 IFGFCKKGKLHEANRIFSEMKATNV 364
           I G CK G   EA+ +   MK   +
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGI 487


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+     +R+  A+    +M 
Sbjct: 48  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+  T   ++H          AV +   M   G  P++ TY  +++G C +G + 
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA    N ME   I+ +V+ FNT+I   CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L  +M+   I  +++T+NALI    KEGK  +A  L  D+ K S+ 
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++LI G C+    ++A Q+++ M+   C P+   +  L+  FC+++  +   E+
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  + +  D++  + L  GL H G  + A K+F++M   G+ P
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+  +A     QM + G+ P   +    +  L    +   A+     M +  
Sbjct: 86  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN+ T  +V++  CK G I+ A  +   ME+      V  +NT+I   C    +  A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ME  GI+PNV+T+++LI   C  G+  +A+++ S+M    ++PN+VT+N LI+ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       L+++M++  I  DI TYN+LI G C   +  KA  + + +      P+ 
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M   G   +   +  L+     + D D A +V  +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           M+   + PD +  S L  GL + GK E A+++F  M+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 181/380 (47%), Gaps = 14/380 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +  R+ D+  LV  ++          F T  H      K   A     +M  
Sbjct: 84  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L     +D+A     +M   +I  +V   N ++ + CK   ++ 
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +FK ME+ G  P+V TY++LIS  C+ G  S A +  + M +  I PN++TFN LI 
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GK  EA ++  +M   ++ P++ TYN+LING+      +    ++E M+      
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ TYN LI G CK  + +    L +++    LV +  TY+ LI G     + + A +++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+  G  P+   + +L+   C N   ++A EV   M +  +  D  I + +  G+   
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +    LF  + ++G+ P
Sbjct: 444 GKVDDGWDLFCSLSLKGVKP 463



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 170/342 (49%), Gaps = 13/342 (3%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP I   NK LS++   ++ D+ +   ++M+R  IS N+YT N++++ FC+   I  A+ 
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +   M  +G+ PS+ T ++L++G+C+   +S A+   + M + G +P+ ITF TLI G  
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
              K  EA  +   M      PN+VTY  ++NG  + G+ ++  +L  +M    I+ D++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            +N +I  LCK      A  L K+++   + PN  TYS+LI+  C       A QL   M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I     PN   F  L+  F +   F  A ++  +M+++ + PD    + L +G   C  D
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF--CMHD 304

Query: 525 EL--AMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
            L  A ++F  M  +   P         KGF K + +    E
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 163/345 (47%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++F+ +  +    +   +A + F +M   G  P + + +  +S L    R   A  
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PN+ T N ++ AF K G    A ++  +M      P + TYN+LI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +    M      P++ T+NTLI GFCK  ++ +   +F EM    +  + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI G    G+ +    ++++M+ +G+  DI+TY+ L+ GLC  GK +KA  +   +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ +  +   Y+ +I G C     +  + L+ S+   G +PN   +  ++S  C     
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             A  +L +M E    PDS   + L       G    + +L R+M
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/291 (25%), Positives = 147/291 (50%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M ++R  P+++  N ++ A  K+   +  + + + M+ +G   ++ TYN LI+  C +  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +SLA+     M K G +P+++T ++L+ G+C   ++ +A  +  +M      P+ +T+ T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G      +    +L + M++ G + +++TY  ++ GLCK G    A  L+  ++   
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +   ++ +I   C  ++ + A  L+K M   G RPN   +  L+S  C    +  A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           ++L +M+EK + P+ +  + L       GK   A KL   M  R + P  F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D ++   R  D     ++ L   +    +   A   F  M      P +++ N  + 
Sbjct: 276 KLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               S+RV+     ++EM    +  +  T   ++      G  + A +VFK M S G  P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G CN G L  A++  + M+K+ I+ ++  + T+I G CK GK+ +   +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNVVTYNT+I+G       +   +L ++M  +G   D  TYN LI    ++
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G    +A L++++     V +AST
Sbjct: 514 GDKAASAELIREMRSCRFVGDAST 537



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 107/227 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++  FN L+    K  K      +  +M+   +S N+ TYN LIN + +     +  +L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G +  I+T ++L+ G C   +   A  LV  + +    P+  T++ LI G  +
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M++ GC+PN   + ++++  C+  D D A  +L +M    +  D +I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            + +   L      + A+ LF++ME +G+ P        I+C    G
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   S   +  ++LF  +  S+R      + +  L +   H     NA   F QM 
Sbjct: 330 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + +  L  L ++ +++ AL  +  M+++ I  ++Y    ++   CK G ++
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++F ++   G  P+V TYNT+ISG C+K LL  A      M+++G  P+  T+NTLI
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++     +  T   + N
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 36/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PI E  NK LSSL+       A+ F K+M   +I P+++T N++++ FC LG +  A  V
Sbjct: 63  PIFEF-NKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSV 121

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG----------------- 328
              +  +GF P   T  TLI G C  G +  A+ F + +   G                 
Sbjct: 122 LAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCK 181

Query: 329 ------------------IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                             +QPNV+ +NT+I   CK   +  A+ + SEM    + P+VVT
Sbjct: 182 TGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVT 241

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI G   VG  +    L+ +ML   IK D+ T+N L+ GLCKEG+ KKA  ++  + 
Sbjct: 242 YTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMI 301

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  +  N  TY++L+ G  + K   +A  ++ +M R G  P+   + ++++  C+ +  D
Sbjct: 302 KQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVD 361

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A  +  EM  K MAP+++  + L  GL   G+   A  L  +M  RG
Sbjct: 362 EAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRG 409



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 174/345 (50%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    K   +A+D   +M      P + +    +   L   R+  A+G + +
Sbjct: 205 VMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQ 264

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+VYT N+++   CK G +++A  V   M   G   ++ TYN+L+ G+     
Sbjct: 265 MLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQ 324

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            + A    N M + G+ P+V +++ +I G CK   + EA  +F EM + +++PN VTYN+
Sbjct: 325 ENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNS 384

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L  EM   G   D++TY++L+  LCK  +  KA  L+  +    
Sbjct: 385 LIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQG 444

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ L+ G C     + A  +Y+ ++  G   +  ++ ++++  C+   FD A 
Sbjct: 445 IQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEAL 504

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            ++ +M +    PD++    L   L    K++ A+KL R+M ++G
Sbjct: 505 SLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 149/309 (48%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S    ++ L  +     AL   +++    + PNV   N ++ + CK  ++  A ++   M
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                 P V TY TLI G    G L  A+   N M    I+P+V TFN L+ G CK+G++
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEM 290

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  + + M    V  N+VTYN+L++GY  V        ++  M R G+  D+ +Y+ +
Sbjct: 291 KKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIM 350

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I GLCK     +A  L K++   S+ PN  TY++LI G         A+ L   M   G 
Sbjct: 351 INGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQ 410

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
             +   +  L+   C+N   D+A  ++ ++ ++ + P+    + L  GL   G+ + A  
Sbjct: 411 PADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQA 470

Query: 530 LFRKMEIRG 538
           +++ + I+G
Sbjct: 471 VYQDLLIKG 479



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 168/363 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   + H      A     ++   GF P   +    +  L  + +V  AL F+ ++ 
Sbjct: 102 FNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVI 161

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  +   +++  CK G    A++V + ++ +   P+V  YNT+I   C   L+ 
Sbjct: 162 AKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M    I P+V+T+ TLI+G    G+L EA  +F++M   N+ P+V T+N L+
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +   ++   M++ G+  +I+TYN+L+ G     +  KA ++   + +  + 
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  +YS +I G C  K  + A  L+K M      PN   +  L+    +      A ++
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
           + EM  +    D I  S L   L    + + A+ L  K++ +G+ P  +     ++   +
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 556 NGE 558
           NG 
Sbjct: 462 NGR 464



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 159/337 (47%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + SL   + V  A     EM   RI P+V T   +++    +G ++ AV +
Sbjct: 202 PNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGL 261

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M      P V T+N L+ G C +G +  A     +M K G+  N++T+N+L+ G+  
Sbjct: 262 FNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFL 321

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             + ++A  +F+ M    V+P+V +Y+ +ING  +    +   +L++EM    +  + +T
Sbjct: 322 VKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVT 381

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN+LI GL K G+   A  LV ++       +  TYS+L+   C     ++A  L   + 
Sbjct: 382 YNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIK 441

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G +PN + + +L+   C+N     A  V  ++L K    D  + + + +GL   G  +
Sbjct: 442 DQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFD 501

Query: 526 LAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            A+ L  KME  G +P        +    EN + +  
Sbjct: 502 EALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKA 538



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 146/309 (47%), Gaps = 5/309 (1%)

Query: 235 LSSLLDSERVDIALGFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           L S +D+  VD A+  +  +   RN + P ++  N ++ +  KL     A+   K ME  
Sbjct: 37  LPSFIDN--VDDAVSSFNHILHMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELK 93

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
              P + T+N LI+  C+ G L+ A      + K G  P+ +T  TLI G C  GK+ EA
Sbjct: 94  QIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREA 153

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                ++ A     + V+Y TLING  + G +     +  ++    ++ +++ YN +I  
Sbjct: 154 LHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDS 213

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK+     A+ L  ++    + P+  TY+ LI G  +    + A  L+  M+    +P+
Sbjct: 214 LCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPD 273

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            + F +L+   C+  +  +A  VL  M+++ +  + +  + L  G     ++  A  +F 
Sbjct: 274 VYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFN 333

Query: 533 KMEIRGLLP 541
            M  RG+ P
Sbjct: 334 TMARRGVTP 342


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 3/384 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L   ++S   D    +FD +       DSS   F L+        K + A      M  
Sbjct: 211 VLEIAIESGLIDYAENVFDEMSVRGVCPDSSS--FKLMVIGCFRDGKIQEADRWLSGMIQ 268

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GF+P   +C   LS+L ++  V+ A+ ++++M      PN+     ++   CK G I++
Sbjct: 269 RGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQ 328

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLI 340
           A E+ + M   G+ P+V T+  LI G C +G    A + F  L+  +  +PNV T+ ++I
Sbjct: 329 AFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMI 388

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+CK+ KL+ A  +FS MK   + PNV TY TLING+ + GN +    L   M   G +
Sbjct: 389 GGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFR 448

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +I TYNA+I  LCK+ +  +A  L+       L  +  TY+ LI  QC + + ++A   
Sbjct: 449 PNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAF 508

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M ++G   +  +  +L++ FC+ +    +  +   ++   + P     + + SG   
Sbjct: 509 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCK 568

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF 544
            G  +LA+K F  M+  G +P  F
Sbjct: 569 EGDFDLALKYFHNMKRHGCVPDSF 592



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 164/348 (47%), Gaps = 5/348 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V   + + ++   +   A      M++ G  P   + N  L   ++S  +D A   + EM
Sbjct: 172 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEM 231

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+  +  +++    + G I+ A      M   GFIP   T   ++S  C  GL+
Sbjct: 232 SVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLV 291

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A+ +   M   G +PN+I F +LI G CKKG + +A  +  EM      PNV T+  L
Sbjct: 292 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351

Query: 375 INGYGQVGNSEMGASLYEEMLRNGI-KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R+ I K ++ TY ++I G CKE K  +A  L   + +  
Sbjct: 352 IDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 411

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN +TY+ LI G C   N +RA++L   M   G RPN + +  ++ + C+      A 
Sbjct: 412 LFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY 471

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
           E+L +     +  D +  + L      C + ++  A+  F +M   G 
Sbjct: 472 ELLNKAFSCGLEADGVTYTILIQ--EQCKQSDIKQALAFFCRMNKTGF 517



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 153/330 (46%), Gaps = 7/330 (2%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M D GF P + +    +  L     +  A    +EM RN   PNVYT   ++   CK
Sbjct: 298 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCK 357

Query: 276 LGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
            G  E+A  +F K + S  + P+V TY ++I G+C +  L+ A    + M++ G+ PNV 
Sbjct: 358 RGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ TLI G CK G    A  + + M      PN+ TYN +I+   +   +     L  + 
Sbjct: 418 TYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKA 477

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR--- 451
              G++ D +TY  LI   CK+   K+A      ++K     +    + LI   C +   
Sbjct: 478 FSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 537

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           K SER FQL  S+   G  P K  +  ++S +C+  DFD A +    M      PDS   
Sbjct: 538 KESERLFQLVVSL---GLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTY 594

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             L SGL      + A KL+  M  RGL P
Sbjct: 595 GSLISGLCKKSMVDEACKLYEAMIDRGLSP 624



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 142/278 (51%), Gaps = 2/278 (0%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F K +R +   PNV+T   ++  +CK   + RA  +F  M+  G  P+V TY TLI+GHC
Sbjct: 368 FLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 427

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G    A +  NLM+  G +PN+ T+N +I   CKK +  EA  + ++  +  +  + V
Sbjct: 428 KAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGV 487

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY  LI    +  + +   + +  M + G + D+   N LI   C++ K K++  L + +
Sbjct: 488 TYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 547

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               LVP   TY+++I+G C   + + A + + +M R GC P+   +  L+S  C+    
Sbjct: 548 VSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 607

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           D A ++   M+++ ++P  +    L     +C +++ A
Sbjct: 608 DEACKLYEAMIDRGLSPPEVTRVTL--AYEYCKRNDSA 643



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 151/302 (50%), Gaps = 1/302 (0%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R++ A+G   +M+   +SP+  T+N V+    + G+I+ A  VF  M   G  P  +++ 
Sbjct: 185 RLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFK 244

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++ G    G +  A ++ + M + G  P+  T   ++   C+ G ++ A   F +M   
Sbjct: 245 LMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDL 304

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              PN++ + +LI+G  + G+ +    + EEM+RNG K ++ T+ ALI GLCK G T+KA
Sbjct: 305 GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA 364

Query: 423 AYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             L   L ++ +  PN  TY+++I G C      RA  L+  M   G  PN + +  L++
Sbjct: 365 FRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLIN 424

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  +FDRA E++  M ++   P+    + +   L    +   A +L  K    GL  
Sbjct: 425 GHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEA 484

Query: 542 KG 543
            G
Sbjct: 485 DG 486



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/278 (26%), Positives = 141/278 (50%), Gaps = 1/278 (0%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
            +  ++  F ++G +  AV +  +M++ G  PS  T N ++      GL+  A    + M
Sbjct: 172 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEM 231

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G+ P+  +F  ++ G  + GK+ EA+R  S M      P+  T   +++   + G  
Sbjct: 232 SVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLV 291

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                 + +M+  G K +++ + +LI GLCK+G  K+A  +++++ +N   PN  T++AL
Sbjct: 292 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 351

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGC-RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           I G C R  +E+AF+L+  ++RS   +PN H +  ++  +C+ +  +RA  +   M E+ 
Sbjct: 352 IDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 411

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + P+    + L +G    G  + A +L   M+  G  P
Sbjct: 412 LFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 143/337 (42%), Gaps = 4/337 (1%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y    K   A   F +M++ G  P + +    ++    +   D A      M      PN
Sbjct: 391 YCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPN 450

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           +YT N V+ + CK      A E+     S G      TY  LI   C +  +  A+ F  
Sbjct: 451 IYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFC 510

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M K G + ++   N LI  FC++ K+ E+ R+F  + +  + P   TY ++I+GY + G
Sbjct: 511 RMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEG 570

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           + ++    +  M R+G   D  TY +LI GLCK+    +A  L + +    L P   T  
Sbjct: 571 DFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRV 630

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L    C R +S  A  + + + +   +        L+   C  +    AA    ++LEK
Sbjct: 631 TLAYEYCKRNDSASAMIVLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK 687

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + D + L+   +     GK+ L   L  ++  RG+
Sbjct: 688 DSSADRVTLAAFTTACSESGKNNLVADLTERIS-RGV 723



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 1/279 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           + P + +    +      ++++ A   +  M+   + PNV T   +++  CK G  +RA 
Sbjct: 377 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAY 436

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           E+   M+  GF P++ TYN +I   C K     A +  N     G++ + +T+  LI   
Sbjct: 437 ELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 496

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+  + +A   F  M  T    ++   N LI  + +    +    L++ ++  G+    
Sbjct: 497 CKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTK 556

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            TY ++I G CKEG    A     ++ ++  VP++ TY +LI+G C +   + A +LY++
Sbjct: 557 ETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEA 616

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           MI  G  P +     L   +C+  D   +A ++LE L+K
Sbjct: 617 MIDRGLSPPEVTRVTLAYEYCKRND-SASAMIVLEPLDK 654



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 103/213 (48%)

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           +L+    +Q        ++  F + G+L+EA  +  +M+   +SP+ +T N ++    + 
Sbjct: 159 SLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIES 218

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G  +   ++++EM   G+  D  ++  +++G  ++GK ++A   +  + +   +P+ +T 
Sbjct: 219 GLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATC 278

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +++  C      RA   ++ MI  G +PN   F  L+   C+     +A E+L EM+ 
Sbjct: 279 TLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 338

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               P+    + L  GL   G  E A +LF K+
Sbjct: 339 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 371


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 171/354 (48%), Gaps = 1/354 (0%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           +C    + +  L   +   + F+ A     +M   G +P     N  +  L D+ RVD A
Sbjct: 28  LCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSA 87

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  Y++M+R+  +P+V T  +++ A CK   I  A  + ++M   G  P+V TYNTLI+G
Sbjct: 88  LVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLING 146

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  A+   N M +N   P+V T+N LI G+CK+ +  +  ++  EM      PN
Sbjct: 147 FCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPN 206

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            +TYNTL++   + G      +L + MLR   K    T+N +I   CK G+   A  L +
Sbjct: 207 FITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQ 266

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +     +P+  TY+ +I+G C     + A QL + M  +GC P+   +  ++S  C+  
Sbjct: 267 LMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKAS 326

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D A EV   +       D +  S L  GL    + + A KL R+ME  G  P
Sbjct: 327 QVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAP 380



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 157/311 (50%), Gaps = 1/311 (0%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           CN  LS+ +  ++   A   +K       SP+  T + +++ FCK    ++A  +   ME
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G +P    YNT+I G C+ G +  A+     M+++   P+VIT+  L+   CK  ++ 
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARIS 119

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A+ I  +M     +PNVVTYNTLING+ ++GN +    L+ +ML N    D+ TYN LI
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G CK+ + +  A L++++ K    PN  TY+ L+           AF L + M+R  C+
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   F +++  FC+    D A E+   M ++   PD    + + SG     + + A +L
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 531 FRKMEIRGLLP 541
             +M   G  P
Sbjct: 300 LERMTEAGCPP 310



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 1/214 (0%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+ IT++TLI GFCK     +A R+  EM+   + P+   YNT+I G    G  +     
Sbjct: 31  PDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVH 90

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           Y +M R+     ++TY  L+  LCK  +   A+ +++D+ +    PN  TY+ LI G C 
Sbjct: 91  YRDMQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCK 149

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             N + A  L+  M+ + C P+   + +L+  +C+ E     A++L EM++    P+ I 
Sbjct: 150 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 209

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + L   L   GK   A  L + M  R   P  F
Sbjct: 210 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 216/473 (45%), Gaps = 10/473 (2%)

Query: 76  GQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-----HVLLKVQKDYVLSLEFFTWV 130
            +D  FV+ A   ++        ALS+ L   R+K      +L+    D  L L FF ++
Sbjct: 36  AEDKQFVD-AVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFL 94

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
             H+    +  +  I++H L K   F  + S+L+          PS +F+ +   Y  C 
Sbjct: 95  GLHRGFDHSTASFCILIHALVKANLFWPASSLLQ--TLLLRALKPSDVFNVLFSCYEKCK 152

Query: 191 -SSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            SS   FDLL + Y   ++  +    F  M      LP + + +  L  L+      +A+
Sbjct: 153 LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAM 212

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M    I P+VY    V+ + C+L  + RA E+  +ME+ G   ++  YN LI G 
Sbjct: 213 ELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C K  +  A+  K  +    ++P+V+T+ TL++G CK  +      +  EM     SP+ 
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
              ++L+ G  + G  E   +L + ++  G+  ++  YNALI  LCK  K  +A  L   
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  L PN  TYS LI   C R   + A      M+ +G + + + +  L++  C+  D
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A   + EM+ K + P  +  + L  G    GK   A++L+ +M  +G+ P
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 199/407 (48%), Gaps = 7/407 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+     F++  ++ D +L   R   S   V  L+ +    R K   A +   ++ 
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEML-CLRFSPSEAAVSSLV-EGLRKRGKIEEALNLVKRVV 359

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D+G  P +   N  + SL    +   A   +  M +  + PN  T ++++  FC+ G ++
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+     M   G   SV  YN+LI+GHC  G +S A  F   M    ++P V+T+ +L+
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G+C KGK+++A R++ EM    ++P++ T+ TL++G  + G       L+ EM    +K
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            + +TYN +I G C+EG   KA   +K++ +  +VP+  +Y  LI G C+   +  A   
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG-LH 519
              + +  C  N+  +  L+  FC+    + A  V  EM+++ +  D +    L  G L 
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659

Query: 520 HCGKD-ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE-KESGGL 564
           H  KD +L   L ++M  RGL P        I+   + G+ KE+ G+
Sbjct: 660 H--KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 167/358 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V++ L  +    +KF  A   F +M   G  P   + +  +       ++D AL F  E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +  +VY  N +++  CK G I  A      M +    P+V TY +L+ G+C+KG 
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A++  + M   GI P++ TF TL+ G  + G + +A ++F+EM   NV PN VTYN 
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY + G+        +EM   GI  D  +Y  LI GLC  G+  +A   V  L K +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              N   Y+ L+ G C     E A  + + M++ G   +   + +L+    +++D     
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +L EM ++ + PD +I + +       G  + A  ++  M   G +P        IN
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 2/390 (0%)

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
           + ++  ++L G++    F L  +LF+ ++      D    ++  + ++    K    A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV--YIYTGVIRSLCELKDLSRAKE 248

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
               M   G    I   N  +  L   ++V  A+G  K++    + P+V T   +++  C
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K+   E  +E+   M  + F PS    ++L+ G   +G +  A+     +   G+ PN+ 
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +N LI   CK  K HEA  +F  M    + PN VTY+ LI+ + + G  +   S   EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +  G+K+ +  YN+LI G CK G    A   + ++    L P   TY++L+ G C +   
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            +A +LY  M   G  P+ + F  L+S   +      A ++  EM E  + P+ +  + +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             G    G    A +  ++M  +G++P  +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 158/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   +  R K   A     +M D G    +   N  ++       +  A GF  E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   ++ P V T   +M  +C  G I +A+ ++  M   G  PS+ T+ TL+SG    GL
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  N M +  ++PN +T+N +I G+C++G + +A     EM    + P+  +Y  
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G    G +       + + +   +++ + Y  L+ G C+EGK ++A  + +++ +  
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +   Y  LI G    K+ +  F L K M   G +P+  I+  ++    +  DF  A 
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            +   M+ +   P+ +  + + +GL   G    A  L  KM+
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 47/384 (12%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  + K   A   + +M   G  P I +    LS L  +  +  A+  + EM    
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN  T N+++  +C+ G + +A E  K M   G +P   +Y  LI G C  G  S A 
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING- 377
            F + + K   + N I +  L+ GFC++GKL EA  +  EM    V  ++V Y  LI+G 
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657

Query: 378 ---------YG-------------------------QVGNSEMGASLYEEMLRNGIKVDI 403
                    +G                         + G+ +    +++ M+  G   + 
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA----LITGQCVRKNSERAFQ 459
           +TY A+I GLCK G   +A  L   +   S VPN  TY      L  G+    + ++A +
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV---DMQKAVE 774

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+ ++++ G   N   + ML+  FC+    + A+E++  M+   ++PD I  + + + L 
Sbjct: 775 LHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL- 832

Query: 520 HCGKDEL--AMKLFRKMEIRGLLP 541
            C ++++  A++L+  M  +G+ P
Sbjct: 833 -CRRNDVKKAIELWNSMTEKGIRP 855



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 39/352 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++ + Y        A +   +M + G +P   S    +  L  + +   A  F   
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEV---------------------------- 285
           + +     N      ++H FC+ G +E A+ V                            
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 286 -------FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                   K M   G  P    Y ++I      G    A    +LM   G  PN +T+  
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN--GYGQVGNSEMGASLYEEMLR 396
           +I G CK G ++EA  + S+M+  +  PN VTY   ++    G+V + +    L+  +L+
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV-DMQKAVELHNAILK 781

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  +  TYN LI G C++G+ ++A+ L+  +  + + P+  TY+ +I   C R + ++
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           A +L+ SM   G RP++  +  L+   C   +  +A E+  EML + + P++
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 4/196 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G +  M      PN  T   V++  CK G +  A  +   M+ +  +P+  TY   + 
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760

Query: 307 GHCNKGLLSL--AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
               KG + +  A++  N + K G+  N  T+N LI GFC++G++ EA+ + + M    V
Sbjct: 761 -ILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           SP+ +TY T+IN   +  + +    L+  M   GI+ D + YN LI G C  G+  KA  
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878

Query: 425 LVKDLDKNSLVPNAST 440
           L  ++ +  L+PN  T
Sbjct: 879 LRNEMLRQGLIPNNKT 894



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)

Query: 206 RKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDI--ALGFYKEMRRNRISPN 262
           +  F N  +  C +M+    +P   +   FL  L   E VD+  A+  +  + +  ++ N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE-VDMQKAVELHNAILKGLLA-N 786

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
             T NM++  FC+ G IE A E+   M   G  P   TY T+I+  C +  +  A++  N
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            M + GI+P+ + +NTLI G C  G++ +A  + +EM    + PN  T  T
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 3/211 (1%)

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVS--PNVVTYNTLINGYGQVGNSEMGASLYEE 393
           F+ LI  + +  ++ +   +F +M  T VS  P V T + L++G  +  +  +   L+ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVF-KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M+  GI+ D+  Y  +I  LC+     +A  ++  ++      N   Y+ LI G C ++ 
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  + K +     +P+   +  L+   C+ ++F+   E++ EML    +P    +S 
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L  GL   GK E A+ L +++   G+ P  F
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 165/350 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            +  L   +   +K   A     +M D G +P   +C   +++     R+  A+  ++ M
Sbjct: 267 AYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESM 326

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +     PNV+T N ++  FC +G + +A+ +   M   G  P V TYN LI G C  G +
Sbjct: 327 KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHI 386

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +   LME NG+  +  T+N LI   CK GK+ EA  +F  ++   + PN VT+NT+
Sbjct: 387 ESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTV 446

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING  + G  ++  +  E+M+  G   D  TY+  I  LCK   +++    + ++ +  +
Sbjct: 447 INGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDV 506

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+   Y+ +I      +N   A +++  M+  GC P+   +   +  +C       A  
Sbjct: 507 KPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAEN 566

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           V++EM +  +  D++  + L  G    GK + A+ + + M     +P  F
Sbjct: 567 VVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHF 616



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 191/439 (43%), Gaps = 25/439 (5%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE-------------------SI 162
           L L  F  +  H P + T  T++ ++  L +    + ++                   S+
Sbjct: 111 LMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSL 170

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           + G   +   D+   LFD +    R      + +  L + +    +   A + F ++   
Sbjct: 171 ILGYCRTQQLDVAQDLFDKM--PLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQ- 227

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
              P + +    +  L D+ R +  L   ++M+     P       ++  +C+    E A
Sbjct: 228 ---PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEA 284

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++   M   G +P   T   +++ +C +G +S A++    M+  G +PNV T+N ++ G
Sbjct: 285 EKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQG 344

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC  GK+++A  +  +M+   V P+VVTYN LI G    G+ E    L   M  NG+  D
Sbjct: 345 FCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAAD 404

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             TYN LI  LCK GK  +A  L   L+   + PN+ T++ +I G C     + A    +
Sbjct: 405 QYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLE 464

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+ +GC P+ + +   +   C+ +        + EML+K + P ++  + +   L    
Sbjct: 465 KMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKER 524

Query: 523 KDELAMKLFRKMEIRGLLP 541
              LA +++ +M   G  P
Sbjct: 525 NYGLATRIWGQMVSLGCSP 543



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 136/300 (45%), Gaps = 2/300 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++F+S+    + C+ +   ++ + + + +  K   A     QMR+ G  P + + N  + 
Sbjct: 321 RVFESM--KLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIR 378

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  ++ A    + M  N ++ + YT N+++ A CK G ++ A  +F  +E  G  P
Sbjct: 379 GQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP 438

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+NT+I+G C  G   +A  F   M   G  P+  T++  I   CK     E     
Sbjct: 439 NSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFI 498

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM   +V P+ V Y  +I+   +  N  +   ++ +M+  G   D++TY   +   C E
Sbjct: 499 DEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNE 558

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+  +A  +V ++ K  ++ +A  Y+ LI G      ++ A  + K M      PN   F
Sbjct: 559 GRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  105 bits (261), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/443 (21%), Positives = 160/443 (36%), Gaps = 88/443 (19%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           ++L   R C   P  + ++LL +         +A      M   G      + N  + +L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDAL 415

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             + +VD A   +  +    I PN  T N V++  CK G  + A    + M S G  P  
Sbjct: 416 CKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDT 475

Query: 299 TTYNTLISGHCN-----KGL------------------------------LSLAMKFKNL 323
            TY+  I   C      +GL                                LA +    
Sbjct: 476 YTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQ 535

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G  P+V+T+ T +  +C +G+LHEA  +  EMK   +  + + YNTLI+G+  +G 
Sbjct: 536 MVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGK 595

Query: 384 SEMGAS---------------------------------------------------LYE 392
           ++   +                                                   L+E
Sbjct: 596 TDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFE 655

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            M +N +      Y A++ G  +E +  +   LV  + ++ L  N   Y++L+   C  +
Sbjct: 656 LMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLR 715

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
               A+ L  SMI  G  PN   ++ L+S F      DRA E+   +  K    D I+  
Sbjct: 716 MYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWK 775

Query: 513 ELYSGLHHCGKDELAMKLFRKME 535
            +  GL   G  ++   +   +E
Sbjct: 776 IIIDGLIRQGHPDMCHDMISILE 798



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/310 (19%), Positives = 127/310 (40%), Gaps = 20/310 (6%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V D LFK     + +  AT  + QM   G  P + +    + +  +  R+  A     E
Sbjct: 515 IVIDRLFK----ERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVME 570

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY------------ 301
           M++  I  +    N ++     +G  + AV + K+M  +  +P+  T+            
Sbjct: 571 MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 302 --NTLISGHCNKGLLSLAMKFK--NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             +  +        + LA  F+   LM+KN +  +   +  ++ GF ++ +L E   + S
Sbjct: 631 AEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVS 690

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            MK  ++  N   Y +L+N + ++       +L   M+ +G   ++++Y  L+ G   EG
Sbjct: 691 HMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEG 750

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +  +A  + + L       +   +  +I G   + + +    +   + +  C+P+   + 
Sbjct: 751 QADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYA 810

Query: 478 MLMSTFCQNE 487
           ML       E
Sbjct: 811 MLTEELSTRE 820


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 192/435 (44%), Gaps = 73/435 (16%)

Query: 172 FDLPSKLF-DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           F  P + F +  + +Y+   S P  FD L          R       ++R YG  P  E+
Sbjct: 182 FPSPHRHFVEHYISTYKTFSSDPASFDFLLLCLPSAPLLR-------RLRQYGISPSPEA 234

Query: 231 CNKFLS---------------------------SLLDSERVDIALGFYKEMRRNRISPNV 263
           CN  LS                           +L D+ RV  A   + EM     +P+V
Sbjct: 235 CNAVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDV 291

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN--------------------- 302
            T  +++H  C LG +E AV++   M + G  P+ T Y                      
Sbjct: 292 VTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVED 351

Query: 303 --------------TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
                         T++SG CNKG L  A ++ + M++ G+  + +T+ T+I G C+  +
Sbjct: 352 MVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVE 411

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L EA ++  EM A  +  + VTY  LI+GY + G       ++  M++ G+  +++TY A
Sbjct: 412 LEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTA 471

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L  GLCK+G  + A  L+ ++    L  NA TY++LI G C     E+A +    M  + 
Sbjct: 472 LTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTAC 531

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +P+ + +  L+   C++ D DRA  +L EML+K + P  +  + L +G    G+ E   
Sbjct: 532 LKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 591

Query: 529 KLFRKMEIRGLLPKG 543
           KL   M  + + P  
Sbjct: 592 KLLDWMLEKNIHPNA 606



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++  +   + ++    +A   F +M+  G      +    ++ L  +  ++ A    +EM
Sbjct: 363 LYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM 422

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+  +  T  +++  +CK G +  A ++   M   G  P+V TY  L  G C +G +
Sbjct: 423 WARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDV 482

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  + M   G++ N  T+N+LI G CK G L +A R  ++M    + P+V TY TL
Sbjct: 483 QAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTL 542

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   + G+ +   SL +EML  GIK  I+TYN L+ G C  G+ +    L+  + + ++
Sbjct: 543 IDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNI 602

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PNA+TY++L+   C+  N +   ++YK M      PN++ + +L+   C+  +   A  
Sbjct: 603 HPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALY 662

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              EM++K     +   S L   L+   K   A +LF  M   GL
Sbjct: 663 FHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGL 707



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 129/264 (48%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +  M +  ++PNV T   +    CK G ++ A E+   M + G   +  TYN+LI+
Sbjct: 450 AFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  AM+    M+   ++P+V T+ TLI   CK G L  A+ +  EM    + P
Sbjct: 510 GLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKP 569

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +VTYN L+NG+   G  E G  L + ML   I  +  TYN+L+   C E   K    + 
Sbjct: 570 TIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIY 629

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K +    + PN +TY+ LI G C  +N + A   +  MI+ G R     +  L+    + 
Sbjct: 630 KGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKK 689

Query: 487 EDFDRAAEVLLEMLEKCMAPDSII 510
           + F  A E+  +M ++ +  +S +
Sbjct: 690 KKFVEARELFHDMRKEGLTAESDV 713



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 144/341 (42%), Gaps = 2/341 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   +   KL   +    R  D   + + +L   Y  R K   A      M 
Sbjct: 401 TMINGLCRAVELEEAEKLLQEMWA--RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMV 458

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +       L     V  A     EM    +  N  T N +++  CK G +E
Sbjct: 459 QRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLE 518

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+    +M++    P V TY TLI   C  G L  A      M   GI+P ++T+N L+
Sbjct: 519 QAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLM 578

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC  G++    ++   M   N+ PN  TYN+L+  Y    N +    +Y+ M    + 
Sbjct: 579 NGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVG 638

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +  TYN LI G CK    K+A Y   ++ +      A++YSALI     +K    A +L
Sbjct: 639 PNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEAREL 698

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +  M + G      +++  +      ++ +    +  E++E
Sbjct: 699 FHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVE 739



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 115/236 (48%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  +  ++ A+    +M    + P+VYT   ++ A CK G ++RA  + + M  
Sbjct: 505 NSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLD 564

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ TYN L++G C  G +    K  + M +  I PN  T+N+L+  +C +  +  
Sbjct: 565 KGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKS 624

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              I+  M++ +V PN  TYN LI G+ +  N +     ++EM++ G ++   +Y+ALI 
Sbjct: 625 TTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIR 684

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L K+ K  +A  L  D+ K  L   +  Y   I       N E    L   ++ +
Sbjct: 685 LLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEA 740



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D G  P I + N  ++    S RV+        M    I PN  T N +M  +C   
Sbjct: 561 EMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIEN 620

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++   E++K M S    P+  TYN LI GHC    +  A+ F + M + G +    +++
Sbjct: 621 NMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYS 680

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI    KK K  EA  +F +M+   ++     Y+  I+      N E   +L +E++  
Sbjct: 681 ALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEA 740

Query: 398 GI 399
            I
Sbjct: 741 SI 742


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 200/413 (48%), Gaps = 26/413 (6%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYR 187
             K +S TL+T+++V+  L+K  + + +  I   +L +    D+F     ++ +++    
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF-----VYTALIKG-- 156

Query: 188 MCDSS-PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           +C S  P     L+K    RK    A            +P + +    +  L  + R+  
Sbjct: 157 LCKSGKPEEAYALYKEANARKHHATA------------VPDVVTYTSLIDGLCKAGRILE 204

Query: 247 ALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A   + +    R   P+  T   ++   CKLG +E   E F  M + G+ P   TY  LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G     ++  A +    M ++G   + +T+N ++ G CK G++ EA   F  M+     
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 324

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
             VVTY+ L++G+   GN      L+  ML  G + ++++YN +I GLC+ GK  KA + 
Sbjct: 325 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 384

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            + L +  L P+  T++A + G C R ++     +L++SM+  G  PN H + +LM   C
Sbjct: 385 FEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGIC 444

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           +    + A E+  EM+ + +APD ++ + L   L   G+ + A+++FR++E R
Sbjct: 445 RAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/358 (27%), Positives = 158/358 (44%), Gaps = 5/358 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F ++       K+   A     +    G  P   + N F+  L  +ERVD A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              K+M   +  P   T   ++    K G ++ A+ V + M   G  P++ TY  +I G 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA----TNV 364
              G +  A +    M  NG +P+   +  LI G CK GK  EA  ++ E  A       
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLY-EEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            P+VVTY +LI+G  + G       ++ +E +  G   D +TY ++I GLCK G+ ++  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
               ++      P+A TY+ALI G    K   +A ++Y+ M++SG   +   + +++   
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+      A    L M E+      +  S L  G    G    A++LFR+M  RG  P
Sbjct: 303 CKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 159/358 (44%), Gaps = 5/358 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + +++        ++  +A     +M +   LP   +    +  LL + R+D A+
Sbjct: 38  CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAM 97

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M     SP + T  +V+    K G +E A  +F +M   G  P    Y  LI G 
Sbjct: 98  AVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGL 157

Query: 309 CNKGLLSLAM---KFKNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFS-EMKATN 363
           C  G    A    K  N  + +    P+V+T+ +LI G CK G++ EA ++F  E     
Sbjct: 158 CKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG 217

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+ VTY ++I+G  ++G  E G   + EM   G + D +TY ALI G  K     KA 
Sbjct: 218 FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAH 277

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + + + ++  V +  TY+ ++ G C       A+  + +M   GC      +  LM  F
Sbjct: 278 RVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGF 337

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C   +   A E+   ML++   P+ +  + +  GL   GK   A   F K+  R L P
Sbjct: 338 CSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCP 395



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/305 (23%), Positives = 141/305 (46%), Gaps = 41/305 (13%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +     + F +MR+ G+ P   +    +   + ++ +  A   Y++M ++    +  T N
Sbjct: 237 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 296

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++   CK G +  A   F  ME  G + +V TY+ L+ G C++G +S A++    M   
Sbjct: 297 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 356

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEAN---------------------------------- 353
           G +PN++++N +I G C+ GKL +A                                   
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416

Query: 354 --RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F  M +   SPN+ +Y+ L++G  + G  E+   ++ EM+  G+  D++ +N LI 
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIR 476

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG--QCVRKNSERAFQLYKSMIRSGC 469
            LC  G+  +A  + ++L++ S  P+A +Y +L+ G  +C R    R    +  +   GC
Sbjct: 477 WLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKL--QGC 533

Query: 470 RPNKH 474
            P  +
Sbjct: 534 APRHY 538



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 66/143 (46%)

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++ +  +I GLC+E +  +A  +++   +    P+  TY+  I G C  +  + AFQL 
Sbjct: 6   DMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLL 65

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M    C P    +  L+    +    D A  VL +M+EK  +P     + +  GL   
Sbjct: 66  KKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKA 125

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G+ E A ++F  M   G  P  F
Sbjct: 126 GRVEEARRIFVDMLGNGCRPDAF 148


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P   + N  +S L  +ER   A    +EM  +   P+++T   ++  FCK    + A+ 
Sbjct: 112 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 171

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-IQPNVITFNTLIFGF 343
           VF+ + + GF P V TY+ LI G C +G L  A+     M K+G   PN +T+N+LI GF
Sbjct: 172 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ GK+ EA  +   M  T  SP+VVTY TL+NG+ ++   +    L  +M R G+  D+
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +T+ +L+ GLC+E +   A +++ ++ + S  P   TY+ ++ G C     E A +    
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM-- 349

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +    C PN   F +++   C+      A E++ E   +   PD ++ + +  GL    K
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409

Query: 524 DELAMKLFRKM-EIRGLLP 541
            + A +++RKM E  G LP
Sbjct: 410 VDEACRVYRKMLEEPGCLP 428



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 2/286 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L   +R++ AL F  +M      P+VYT   V+HA C    +  A +  + M +  
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V TY  LI G C  G +  A+   + M K  + P  +T+N+LI G CK  +  EA 
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM  +   P++ TY TLI G+ +   S+    ++E+++  G + D++TY+ LI GL
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 414 CKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           CKEG+ K+A  L   + K+ S +PN  TY++LI+G C     + A  L + M  +G  P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              +  LM+ FC+    D A ++L +M  K + PD +  + L  GL
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 140/286 (48%), Gaps = 2/286 (0%)

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           N  S +  T   ++   CK+  +E+A+     M S GF P V TY  +I   C +  L  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A KF   M    + PNV+T+  LI G CK G++ EA  + S+M+   V P  VTYN+LI+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  +   +     L EEM+ +G   DI TY  LI G CK  K+  A  + + L      P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +  TYS LI G C     + A  L+  MI+SG C PN   +  L+S FC+    D A  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  M E   +PD +  + L +G     + + A  L  +M  +GL P
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 162/344 (47%), Gaps = 2/344 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C +  + +  L +     K+   A     +M   GF P + +    + +L    R+  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F +EM    ++PNV T  +++   CK G ++ AV +   M     +P+  TYN+LISG 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGL 125

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C     S A      M  +G  P++ T+ TLI GFCK  K  +A R+F ++ A    P+V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-DILTYNALILGLCKEGKTKKAAYLVK 427
           VTY+ LI+G  + G  +    L+  M+++G  + + +TYN+LI G C+ GK  +A  L++
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +    P+  TY+ L+ G C     + A+ L   M R G  P+   F  LM   C+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
               A  +L EM  K  +P     + +  G     + E A K  
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 159/328 (48%), Gaps = 10/328 (3%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M +    P + +    +  L    RVD A+    +MR+ +  P   T N ++   CK  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCK-- 127

Query: 278 IIERAVEVFKNMESM---GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
             ERA E +  +E M   G IP + TY TLI+G C       A++    +   G +P+V+
Sbjct: 128 -AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           T++ LI G CK+G+L EA  +F  M K+ +  PN VTYN+LI+G+ ++G  +   +L E 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G   D++TY  L+ G CK  +   A  L+  + +  L P+  T+++L+ G C    
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  +   M R  C P  + +  ++  +C+    + A + +LE ++    P+ +  + 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  GL    +   AM+L  +   R   P
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNP 392



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 180/359 (50%), Gaps = 17/359 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L       ++   A D   +M   G +P I +    ++    S++ D AL
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
             ++++      P+V T + ++   CK G ++ A+++F  M +S   +P+  TYN+LISG
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  AM     M + G  P+V+T+ TL+ GFCK  +L +A  + ++M    ++P+
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLV 426
           VVT+ +L++G  +         +  EM R      + TYN ++ G C+  + ++A  +++
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++D     PN  +++ +I G C    S  A +L +   R  C P+  ++  ++   C+ 
Sbjct: 351 EEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 487 EDFDRAAEVLLEMLEK--CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           +  D A  V  +MLE+  C+ P+SI  S L +GL + G  + A         RG + KG
Sbjct: 408 KKVDEACRVYRKMLEEPGCL-PNSITYSTLVTGLCNAGMLDRA---------RGYIEKG 456



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 130/282 (46%), Gaps = 9/282 (3%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   +    K   A +   +M + G  P + +    ++      R+D A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M R  ++P+V T   +M   C+   +  AV +   M      P+V TYNT++ G+
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A KF  ++E+    PNV++FN +I G CK  +  EA  +  E +    +P+V
Sbjct: 337 CRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTKKA-AYLV 426
           V Y T+I+G  +    +    +Y +ML   G   + +TY+ L+ GLC  G   +A  Y+ 
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE 454

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           K       VPN  TY+ LI         E A +L   M++ G
Sbjct: 455 K-----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 36/245 (14%)

Query: 191 SSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           SSP  + +  L   +    +  +A D   QM   G  P + +    +  L    R+  A+
Sbjct: 252 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAV 311

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EMRR   SP VYT N ++  +C+   +E A +    +E M   P+V ++N +I G 
Sbjct: 312 HILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGL 369

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM--------- 359
           C     S AM+      +    P+V+ + T+I G C++ K+ EA R++ +M         
Sbjct: 370 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPN 429

Query: 360 ---KATNVS--------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
               +T V+                    PN+ TYN LI+ + +    E    L ++M++
Sbjct: 430 SITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 397 NGIKV 401
            G  V
Sbjct: 490 RGFGV 494


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 189/386 (48%), Gaps = 37/386 (9%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A     ++R    LP   +CNK +  L++S    ++L F   +     +P+  + N V
Sbjct: 3   REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNG 328
           +   CKLG ++ A ++  +M   G  P V +YN+LI GHC  G + S ++  ++L   +G
Sbjct: 63  VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122

Query: 329 I------------------------------------QPNVITFNTLIFGFCKKGKLHEA 352
                                                 PNV+T++T I  FCK G+L  A
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            + F  MK   +SPNVVT+  LI+GY + G+ E+  SLY+EM R  + ++++TY ALI G
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK+G+ ++A  +   + ++ + PN+  Y+ +I G   R +S+ A +    M+  G R +
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +++S  C N     A E++ +M +  + PD +I + + +     G+ + A+ ++ 
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGE 558
           K+  RG  P        I+   +NG+
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQ 388



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 177/385 (45%), Gaps = 34/385 (8%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR-DYGFL--PIIESCNKFLSSLLDSERVD 245
           C+   + ++ L   +      R+A+     +R  +GF+  P I S N   +     + +D
Sbjct: 87  CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
               +   M +   SPNV T +  +  FCK G ++ A++ F +M+     P+V T+  LI
Sbjct: 147 EVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C  G L +A+     M +  +  NV+T+  LI GFCKKG++  A  ++S M    V 
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN + Y T+I+G+ Q G+S+       +ML  G+++DI  Y  +I GLC  GK K+A  +
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP-------------- 471
           V+D++K+ LVP+   ++ ++         + A  +Y  +I  G  P              
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385

Query: 472 ----------------NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
                           N  ++ +L+   C+  DF     +  ++ E  + PD  + +   
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLL 540
           +GL   G    A KL  +M   GLL
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLL 470



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 172/399 (43%), Gaps = 30/399 (7%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C  + + +     T+    + + A  +F  M+     P + +    +     +  +++
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  YKEMRR R+S NV T   ++  FCK G ++RA E++  M      P+   Y T+I 
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G   +G    AMKF   M   G++ ++  +  +I G C  GKL EA  I  +M+ +++ P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT--------------------- 405
           ++V + T++N Y + G  +   ++Y +++  G + D++                      
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396

Query: 406 ---------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                    Y  LI  LCKEG   +   L   + +  LVP+   Y++ I G C + N   
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           AF+L   M++ G   +   +  L+           A +V  EML   ++PDS +   L  
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
                G    A  L   M+ RGL+    D   +  C  E
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLVTAVSDADCSKQCGNE 555



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 39/300 (13%)

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++  A++    +     +P   T N  I    N     L++KF   +   G  P+  +FN
Sbjct: 1   MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +++   CK G++  A  I   M      P+V++YN+LI+G+ + G+    ASL  E LR 
Sbjct: 61  SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR-SASLVLESLRA 119

Query: 398 G----IKVDILTYNALILG----------------------------------LCKEGKT 419
                 K DI+++N+L  G                                   CK G+ 
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A      + +++L PN  T++ LI G C   + E A  LYK M R     N   +  L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  FC+  +  RA E+   M+E  + P+S++ + +  G    G  + AMK   KM  +G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 23/262 (8%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L +  + +++  L  N K K +  I+    D +  DL   +               ++F 
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVE---DMEKSDLVPDM---------------VIFT 342

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            +   Y    + + A + + ++ + GF P + + +  +  +  + ++  A+ ++   + N
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            +   +YT+  ++ A CK G       +F  +   G +P    Y + I+G C +G L  A
Sbjct: 403 DV---MYTV--LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            K K  M + G+  +++ + TLI+G   KG + EA ++F EM  + +SP+   ++ LI  
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517

Query: 378 YGQVGNSEMGASLYEEMLRNGI 399
           Y + GN    + L  +M R G+
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGL 539


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P   + N  +S L  +ER   A    +EM  +   P+++T   ++  FCK    + A+ 
Sbjct: 112 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 171

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-IQPNVITFNTLIFGF 343
           VF+ + + GF P V TY+ LI G C +G L  A+     M K+G   PN +T+N+LI GF
Sbjct: 172 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 231

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+ GK+ EA  +   M  T  SP+VVTY TL+NG+ ++   +    L  +M R G+  D+
Sbjct: 232 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDV 291

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +T+ +L+ GLC+E +   A +++ ++ + S  P   TY+ ++ G C     E A +    
Sbjct: 292 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM-- 349

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +    C PN   F +++   C+      A E++ E   +   PD ++ + +  GL    K
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKK 409

Query: 524 DELAMKLFRKM-EIRGLLP 541
            + A +++RKM E  G LP
Sbjct: 410 VDEACRVYRKMLEEPGCLP 428



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 2/286 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L   +R++ AL F  +M      P+VYT   V+HA C    +  A +  + M +  
Sbjct: 17  LIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN 76

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V TY  LI G C  G +  A+   + M K  + P  +T+N+LI G CK  +  EA 
Sbjct: 77  LTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAY 135

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM  +   P++ TY TLI G+ +   S+    ++E+++  G + D++TY+ LI GL
Sbjct: 136 DLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGL 195

Query: 414 CKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           CKEG+ K+A  L   + K+ S +PN  TY++LI+G C     + A  L + M  +G  P+
Sbjct: 196 CKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPD 255

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              +  LM+ FC+    D A ++L +M  K + PD +  + L  GL
Sbjct: 256 VVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGL 301



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 140/286 (48%), Gaps = 2/286 (0%)

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           N  S +  T   ++   CK+  +E+A+     M S GF P V TY  +I   C +  L  
Sbjct: 5   NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A KF   M    + PNV+T+  LI G CK G++ EA  + S+M+   V P  VTYN+LI+
Sbjct: 65  ARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLIS 123

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  +   +     L EEM+ +G   DI TY  LI G CK  K+  A  + + L      P
Sbjct: 124 GLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRP 183

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +  TYS LI G C     + A  L+  MI+SG C PN   +  L+S FC+    D A  +
Sbjct: 184 DVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNL 243

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  M E   +PD +  + L +G     + + A  L  +M  +GL P
Sbjct: 244 LERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTP 289



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 162/344 (47%), Gaps = 2/344 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C +  + +  L +     K+   A     +M   GF P + +    + +L    R+  A 
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F +EM    ++PNV T  +++   CK G ++ AV +   M     +P+  TYN+LISG 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C     S A      M  +G  P++ T+ TLI GFCK  K  +A R+F ++ A    P+V
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-DILTYNALILGLCKEGKTKKAAYLVK 427
           VTY+ LI+G  + G  +    L+  M+++G  + + +TYN+LI G C+ GK  +A  L++
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +    P+  TY+ L+ G C     + A+ L   M R G  P+   F  LM   C+  
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
               A  +L EM  K  +P     + +  G     + E A K  
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 159/328 (48%), Gaps = 10/328 (3%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M +    P + +    +  L    RVD A+    +MR+ +  P   T N ++   CK  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCK-- 127

Query: 278 IIERAVEVFKNMESM---GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
             ERA E +  +E M   G IP + TY TLI+G C       A++    +   G +P+V+
Sbjct: 128 -AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           T++ LI G CK+G+L EA  +F  M K+ +  PN VTYN+LI+G+ ++G  +   +L E 
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLER 246

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G   D++TY  L+ G CK  +   A  L+  + +  L P+  T+++L+ G C    
Sbjct: 247 MAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENR 306

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  +   M R  C P  + +  ++  +C+    + A + +LE ++    P+ +  + 
Sbjct: 307 LSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNI 364

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  GL    +   AM+L  +   R   P
Sbjct: 365 MIRGLCKVNRSSEAMELVEEARRRRCNP 392



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 180/359 (50%), Gaps = 17/359 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L       ++   A D   +M   G +P I +    ++    S++ D AL
Sbjct: 111 CVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 170

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
             ++++      P+V T + ++   CK G ++ A+++F  M +S   +P+  TYN+LISG
Sbjct: 171 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 230

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  AM     M + G  P+V+T+ TL+ GFCK  +L +A  + ++M    ++P+
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLV 426
           VVT+ +L++G  +         +  EM R      + TYN ++ G C+  + ++A  +++
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFML 350

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++D     PN  +++ +I G C    S  A +L +   R  C P+  ++  ++   C+ 
Sbjct: 351 EEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 487 EDFDRAAEVLLEMLEK--CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           +  D A  V  +MLE+  C+ P+SI  S L +GL + G  + A         RG + KG
Sbjct: 408 KKVDEACRVYRKMLEEPGCL-PNSITYSTLITGLCNAGMLDRA---------RGYIEKG 456



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 130/282 (46%), Gaps = 9/282 (3%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   +    K   A +   +M + G  P + +    ++      R+D A 
Sbjct: 217 CMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAY 276

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M R  ++P+V T   +M   C+   +  AV +   M      P+V TYNT++ G+
Sbjct: 277 DLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGY 336

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    L  A KF  ++E+    PNV++FN +I G CK  +  EA  +  E +    +P+V
Sbjct: 337 CRANQLEEARKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDV 394

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTKKA-AYLV 426
           V Y T+I+G  +    +    +Y +ML   G   + +TY+ LI GLC  G   +A  Y+ 
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE 454

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           K       VPN  TY+ LI         E A +L   M++ G
Sbjct: 455 K-----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 170/365 (46%), Gaps = 36/365 (9%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K F  A+D  C  RD    P +   N  L +LL    V   +  Y  MR+  + PNVYT 
Sbjct: 107 KTFYRASDLGC--RD----PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTY 160

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF------ 320
           N+++ A C+   ++ A ++   M   G  P   ++ T++SG C  G +  A  F      
Sbjct: 161 NLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVP 220

Query: 321 ------------------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
                                    N M + G+QPNV+T+ T++  FCK  +L  A  I 
Sbjct: 221 VQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAIL 280

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + M +   +PNV+T+  L+ G+ + G      S++  M+  G     ++YN LI GLC  
Sbjct: 281 ARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 340

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  K A      + +N+L+PNA+TYS L+ G     + + A  ++  M  SGC+PN  ++
Sbjct: 341 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 400

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             ++   C+   FD+A  ++ +ML     P+++  + L   L  CG+   A+ +F  M  
Sbjct: 401 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 460

Query: 537 RGLLP 541
            G  P
Sbjct: 461 NGCHP 465



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 169/383 (44%), Gaps = 7/383 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++R +  +D  D   K+ D +  S + C    +    +        +   A     +   
Sbjct: 163 LIRALCQNDRVDAARKMLDEM--SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-- 218

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
              +P+  S N  + +L    R+        EM +  + PNV T   ++ AFCK   +  
Sbjct: 219 ---VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRM 275

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M SMG  P+V T+  L+ G    G +  A+   + M   G  P+ I++N LI 
Sbjct: 276 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIR 335

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  G L  A   F+ MK   + PN  TY+TL++G+   G+ +    ++ EM  +G K 
Sbjct: 336 GLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKP 395

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y  +I  LCK+    +A  L+  +  ++  PN  T++ LI   C      RA  ++
Sbjct: 396 NVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVF 455

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M R+GC PN   +  L+    +  +   A  +++EML        +  + + + L   
Sbjct: 456 HGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQM 515

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
              + AM L  +M ++G+ P  F
Sbjct: 516 CMRKHAMLLLGRMMVQGIQPDAF 538



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 151/330 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + L F  L K +    K  +A   +  M D G+ P   S N  +  L     +  AL
Sbjct: 288 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 347

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+  M+RN + PN  T + ++  F   G ++ A+ ++  M+S G  P+V  Y  +I   
Sbjct: 348 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C K +   A    + M  +   PN +TFNTLI   C  G++  A  +F  M+     PN 
Sbjct: 408 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYN L++G  + GN +   ++  EML NG ++ ++TYN +I  LC+    K A  L+  
Sbjct: 468 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 527

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+A T++A+I   C       A  L   M    C  N   + +L+S  C    
Sbjct: 528 MMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 587

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
              A   LL+ML + + P+    + L   +
Sbjct: 588 LSNAMVYLLKMLYEGICPNEATWNVLVRAI 617



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 159/348 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +   ++ R A     +M   G  P + +    +    +  +V  AL  +  
Sbjct: 258 VTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW 317

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     +P+  + N+++   C +G ++ A++ F +M+    +P+ TTY+TL+ G  N G 
Sbjct: 318 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 377

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  AM   N M+ +G +PNV+ +  +I   CKK    +A  +  +M   N  PN VT+NT
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 437

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI      G      +++  M RNG   +  TYN L+ GL +EG  K A  +V ++  N 
Sbjct: 438 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 497

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              +  TY+ +I   C     + A  L   M+  G +P+   F  ++  +C+      AA
Sbjct: 498 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 557

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L +M       + +  + L S L + GK   AM    KM   G+ P
Sbjct: 558 CLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICP 605



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P + +    + +   +  + +A      M     +PNV T   ++  F + G
Sbjct: 247 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 306

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A+ ++  M   G+ PS  +YN LI G C  G L  A+ F N M++N + PN  T++
Sbjct: 307 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 366

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ GF   G L  A  I++EMK++   PNVV Y  +I+   +    +   SL ++ML +
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 426

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               + +T+N LI  LC  G+  +A  +   + +N   PN  TY+ L+ G     N + A
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F +   M+ +G   +   +  +++  CQ      A  +L  M+ + + PD+   + +   
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546

Query: 518 LHHCGKDELAMKLFRKM 534
               GK  +A  L  +M
Sbjct: 547 YCKEGKVSIAACLLGQM 563


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 174/378 (46%), Gaps = 37/378 (9%)

Query: 202 TYAHRKKFRNATDTF-CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           T+       +A   F C +R     P IE  NK L SL+ S+     L   K+M    I 
Sbjct: 61  TFHSNNDVDDAVSLFNCLLRQNPTPPAIEF-NKILGSLVKSKHYHTVLYLSKKMEFRGIK 119

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN+   N++++ FC+LG+I  A  VF  +  MG+ P+  T+ TLI G C KG +  A+ F
Sbjct: 120 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNF 179

Query: 321 KNLMEKNG-----------------------------------IQPNVITFNTLIFGFCK 345
            + +   G                                   +QPNV+ ++T+I G CK
Sbjct: 180 HDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCK 239

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              +++A  ++SEM +  +SPNVVTY+ LI+G+  VG  +    L+ +M+   IK D+ T
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N L+   CK GK   A  LV ++      PN  TYS+++   C     ++A  L   + 
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G RPN H + +L+   C +   + A  +  ++L K      +    ++ G    G  +
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A  L  KME  G +P  
Sbjct: 420 EASALLSKMEENGCIPDA 437



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 159/325 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F ++   G+ P   +    +  L    ++  AL F+ ++       N  +   ++ 
Sbjct: 141 AFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLID 200

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK+G    A+++ + ++     P+V  Y+T+I G C    ++ A    + M   GI P
Sbjct: 201 GLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISP 260

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+T++ LI GF   GKL +A  +F++M + N+ P+V T+N L++ + + G       L 
Sbjct: 261 NVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLV 320

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM   G   +I+TY++++  LCK  +  KA  L+  L    + PN  TY+ LI G C  
Sbjct: 321 DEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTS 380

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E A  +++ ++  G       + ++   FC+   FD A+ +L +M E    PD+   
Sbjct: 381 GKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTY 440

Query: 512 SELYSGLHHCGKDELAMKLFRKMEI 536
             +   L   G++++A KL R+ EI
Sbjct: 441 ELIKLSLFKKGENDMAEKLHRECEI 465



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 37/189 (19%), Positives = 76/189 (40%)

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N  F+ +  ++   N++ Y++    +    + +   SL+  +LR       + +N ++  
Sbjct: 37  NTHFNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGS 96

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           L K        YL K ++   + PN    + LI   C       AF ++  +++ G  PN
Sbjct: 97  LVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPN 156

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              F  L+   C      +A     +++      + I    L  GL   G+   A+ L R
Sbjct: 157 TITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLR 216

Query: 533 KMEIRGLLP 541
           +++ + + P
Sbjct: 217 RVDGKLVQP 225


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 177/344 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  ++   K   +A D + +M      P + + N  +       ++  A+G   E
Sbjct: 195 IMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNE 254

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N ++PNVYT N+++   CK G +++A  V   M   G  P+V TY +L+ G+     
Sbjct: 255 MSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKE 314

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    N +   G+ PNV +++ +I G CK   + EA ++F EM   N++PN VTY++
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L +E+   G   +I+TYN+L+ GLCK  +  KA  L+  +    
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+ STY+ L+ G C     + A ++Y+ ++  G   N  ++ ++++  C+   FD A 
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            +L +M +    PD++    L S L    K+  A+KL R+M  R
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 167/349 (47%), Gaps = 37/349 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PI E  NK LSSL+      IA+ F ++M    I P ++T N++++ F  L  +  A  +
Sbjct: 52  PIFE-FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              +  +G+ P   T NTL+ G C  G +  A+ F + + +     + +++ TLI G CK
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 346 KGKLH------------------------------------EANRIFSEMKATNVSPNVV 369
            G+                                      +A  ++SEM    + PNVV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+N+LI G+  VG  +    L  EM  N +  ++ T+N LI GLCKEG+ KKA  ++  +
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K  + PN  TY++L+ G  + K   +A  ++ ++   G  PN H + ++++  C+N+  
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           D A ++  EM  K M P+++  S L  GL   G+      L  ++  RG
Sbjct: 351 DEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRG 399



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 171/379 (45%), Gaps = 36/379 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   ++H  +   A     ++   G+ P   + N  L  L  + +V  AL F+  + 
Sbjct: 91  FNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVI 150

Query: 256 RNR------------------------------------ISPNVYTLNMVMHAFCKLGII 279
           R R                                    + P+V     ++ +FCK  ++
Sbjct: 151 RKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A +++  M      P+V T+N+LI G C  G L  A+   N M  N + PNV TFN L
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G CK+G++ +A  + S M    V PNVVTY +L++GY  V        ++  +   G+
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             ++ +Y+ +I GLCK     +A  L K++   ++ PN  TYS+LI G C        + 
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   +   G   N   +  L++  C+N   D+A  +L +M ++ + PD    + L  GL 
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 520 HCGKDELAMKLFRKMEIRG 538
             G+ + A ++++ +  +G
Sbjct: 451 KNGRLKDAQRIYQDLLCKG 469



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 5/300 (1%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D    F   +  N  +P ++  N ++ +  K+   + A+   + ME  G  P + T+N L
Sbjct: 35  DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+   +   L+ A      + K G QP+ +T NTL+ G C  GK+ EA      +     
Sbjct: 95  INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRF 154

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG---IKVDILTYNALILGLCKEGKTKK 421
             + V+Y TLING  + G +     L  ++   G   ++ D++ Y A+I   CK+     
Sbjct: 155 HLDQVSYGTLINGLCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L  ++    + PN  T+++LI G C+    + A  L   M  +   PN + F +L+ 
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  +  +A  VL  M+++ + P+ +  + L  G     +   A  +F  + +RG+ P
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 9/300 (3%)

Query: 249 GFYKE-----MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           GF+KE     M   RISPNV T N ++ A CK   +++A+EV   M   G +P   TYN+
Sbjct: 97  GFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 156

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++ G C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA +IF  M    
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++ TY TL+ GY   G       L + M+RNGI  +   ++ L+    K+ K ++A 
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 276

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + +  L PNA TY  +I   C     E A   ++ MI  G RP+  ++  L+ + 
Sbjct: 277 LVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSL 336

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           C  + +++A E+ LEML++ +   +I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS--HCKEGRVIESGKLFDLMVRIGVKP 394



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 133/261 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+ F K+MR + + P+V T N +M 
Sbjct: 135 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 194

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 195 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 254

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ L+  + K+ K+ EA  +FS+M+   ++PN VTY T+I+   + G  E     +
Sbjct: 255 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 314

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G++ D + YN+LI  LC   K +KA  L  ++    +  +   ++++I   C  
Sbjct: 315 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 374

Query: 452 KNSERAFQLYKSMIRSGCRPN 472
                + +L+  M+R G +P+
Sbjct: 375 GRVIESGKLFDLMVRIGVKPD 395



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 10/324 (3%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D    P + + N  +++L  ++ VD A+     M ++ + P+  T N ++H FC  G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A+   K M S G  P V TYN+L+   C  G  + A K  + M K G++P++ T+ 
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ G+  KG L E + +   M    + PN   ++ L+  Y +    E    ++ +M + 
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  + +TY  +I  LCK G+ + A    + +    L P++  Y++LI   C+    E+A
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+  M+  G   +   F  ++ + C+      + ++   M+   + PD I L      
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL------ 399

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G+++ A  LF      GL+P
Sbjct: 400 ----GRNDEAKDLFVAFSSNGLVP 419



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 140/299 (46%), Gaps = 45/299 (15%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFN 337
           E A  VF  +   G IP V +YN L++G C++     A++  ++M  +G    P+V++++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI---------------------- 375
           T+I GF K+G L        +M    +SPNVVTYN++I                      
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 376 -------------NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
                        +G+   G  +      ++M  +G++ D++TYN+L+  LCK G+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   + K  L P+ +TY  L+ G   +        L   M+R+G  PN ++F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + E  + A  V  +M ++ + P+++    +   L   G+ E AM  F +M   GL P
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 16/257 (6%)

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G    M RN I PN Y  ++++ A+ K   +E A+ VF  M   G  P+  TY T+I   
Sbjct: 242 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVL 301

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  AM +   M   G++P+ I +N+LI   C   K  +A  +F EM    +  + 
Sbjct: 302 CKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLST 361

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + +N++I+ + + G       L++ M+R G+K DI+T           G+  +A  L   
Sbjct: 362 IFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVA 411

Query: 429 LDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              N LVPN  TY  +   I GQ +    E   QL+ SM  +GC  +  +   ++    Q
Sbjct: 412 FSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLSMEDNGCTVDSGMLNFIVRELLQ 468

Query: 486 NEDFDRAAEVLLEMLEK 502
             +  RA   L  + EK
Sbjct: 469 RGEITRAGTYLSMIDEK 485



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 13/276 (4%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA ++K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+    N ++H+ C     E+A E+F  M   G   S   +N++I  HC +G +
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT           G+  EA  +F    +  + PN  TY  +
Sbjct: 378 IESGKLFDLMVRIGVKPDIITL----------GRNDEAKDLFVAFSSNGLVPNYWTYRLM 427

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
                  G  E    L+  M  NG  VD    N ++  L + G+  +A   +  +D+   
Sbjct: 428 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 487

Query: 435 VPNASTYSALITGQCVRKNSERAFQL---YKSMIRS 467
              AST S  I      K  E    L   YKS I S
Sbjct: 488 SLEASTASLFIDLLSGGKYQEYHIFLPEKYKSFIES 523


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  171 bits (433), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S +  ++       +D     Y EM   RISPNV T N ++ A CK   +++A+EV
Sbjct: 86  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEV 145

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   G +P   TYN+++ G C+ G    A+ F   M  +G++P+V+T+N+L+   CK
Sbjct: 146 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 205

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  EA +IF  M    + P + TY TL+ GY   G       L + M+RNGI  +   
Sbjct: 206 NGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 265

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           ++ L+    K+ K ++A  +   + +  L PNA TY A+I   C     E A   ++ MI
Sbjct: 266 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMI 325

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GK 523
             G  P   ++  L+   C    ++RA E++LEML++ +  ++I  + +     HC  G+
Sbjct: 326 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS--HCKEGR 383

Query: 524 DELAMKLFRKMEIRGLLP 541
              + KLF  M   G+ P
Sbjct: 384 VIESEKLFDLMVRIGVKP 401



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 164/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+ F K+MR + + P+V T N +M 
Sbjct: 142 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 201

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 202 YLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 261

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ L+  + K+ K+ EA  +FS+M+   ++PN VTY  +I    + G  E     +
Sbjct: 262 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 321

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+    + YN+LI GLC   K ++A  L+ ++    +  N   ++++I   C  
Sbjct: 322 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 381

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+  +C     D A ++L  M+   M PD +  
Sbjct: 382 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L +G     + + A+ LFR+ME  G+ P
Sbjct: 442 STLINGYCKISRMKDALVLFREMESSGVSP 471



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 171/344 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA ++K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 265 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 324

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +SP     N ++H  C     ERA E+   M   G   +   +N++I  HC +G +
Sbjct: 325 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 384

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT++TLI G+C  GK+ EA ++ + M +  + P+ VTY+TL
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTL 444

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   +    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + K+  
Sbjct: 445 INGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGR 504

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C  K ++ A ++++++     +     F +++    +    D A +
Sbjct: 505 QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 564

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           + +      + P+      +   +   G  E   +LF  ME  G
Sbjct: 565 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 608



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 151/301 (50%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
            E+V+ A+  + +MR+  ++PN  T   V+   CK G +E A+  F+ M   G  P    
Sbjct: 276 QEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIV 335

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN+LI G C       A +    M   GI  N I FN++I   CK+G++ E+ ++F  M 
Sbjct: 336 YNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV 395

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              V P+++TY+TLI+GY   G  +    L   M+  G+K D +TY+ LI G CK  + K
Sbjct: 396 RIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMK 455

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  L ++++ + + P+  TY+ ++ G    + +  A +LY  + +SG +     + +++
Sbjct: 456 DALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIIL 515

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+N+  D A  +   +    +  ++   + +   L   G+++ A  LF      GL+
Sbjct: 516 HGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 575

Query: 541 P 541
           P
Sbjct: 576 P 576



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 118/247 (47%)

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G    M RN I PN Y  ++++ A+ K   +E A+ VF  M   G  P+  TY  +I   
Sbjct: 249 GLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGIL 308

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  AM +   M   G+ P  I +N+LI G C   K   A  +  EM    +  N 
Sbjct: 309 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 368

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + +N++I+ + + G       L++ M+R G+K DI+TY+ LI G C  GK  +A  L+  
Sbjct: 369 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLAS 428

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+  TYS LI G C     + A  L++ M  SG  P+   + +++    Q   
Sbjct: 429 MVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRR 488

Query: 489 FDRAAEV 495
              A E+
Sbjct: 489 TAAAKEL 495



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 38/299 (12%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFN 337
           E A  VF  +   G IP V +YN L++G C++     A++  ++M  +G    P+V++++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GF K+G L +    ++EM    +SPNVVTYN++I    +    +    +   M+++
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  D +TYN+++ G C  G+ K+A   +K +  + + P+  TY++L+   C       A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 458 FQLYKS-----------------------------------MIRSGCRPNKHIFEMLMST 482
            +++ S                                   M+R+G  PN ++F +L+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + E  + A  V  +M ++ + P+++    +   L   G+ E AM  F +M   GL P
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 161/339 (47%), Gaps = 20/339 (5%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++LY  +M D   SP  +V++ L        K+  A +   +M D G  L  I  
Sbjct: 312 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-- 369

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + P++ T + ++  +C  G ++ A ++ 
Sbjct: 370 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 426

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TY+TLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 427 ASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    +K++  T+
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKS 463
           N +I  L K G+  +A  L      N LVPN  TY  +   I GQ +    E   QL+ S
Sbjct: 547 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLS 603

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           M  +GC  +  +   ++    Q  +  RA   L  + EK
Sbjct: 604 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 642



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 147/345 (42%), Gaps = 26/345 (7%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFK 201
           ++H L    K++ +E ++  +LD     L +  F+SI+ S+    R+ +S  L FDL+ +
Sbjct: 339 LIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKL-FDLMVR 396

Query: 202 T---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                           Y    K   AT     M   G  P   + +  ++      R+  
Sbjct: 397 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKD 456

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++EM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ 
Sbjct: 457 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILH 516

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C   L   A++ F+NL   + ++    TFN +I    K G+  EA  +F    +  + 
Sbjct: 517 GLCKNKLTDDALRMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLV 575

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TY  +       G  E    L+  M  NG  VD    N ++  L + G+  +A   
Sbjct: 576 PNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTY 635

Query: 426 VKDLDKNSLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRS 467
           +  +D+      AST S    L++G   ++      + YKS I S
Sbjct: 636 LSMIDEKHFSLEASTASLFIDLLSGGKYQEYHRFLPEKYKSFIES 680


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 185/371 (49%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++ L   +  +  F  A D   +M +    P + + N  +  L    +V      +
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M +++ +P++ + N +++ +C+ G I  A  +F  ++    +P+V TYNTLI G C  
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A++ K  M   G+ P++ T+  L+ G  K G +  A   F+EM +  + P+   Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT I G  ++ ++ +  S+ EEML  G   D++TYN  +  LC++G  ++A  L++++  
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           + L+P+  TY+++I G     +  +A +++  M+  G  P+   + +L+      +  D 
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A     +MLEK +  + I  + + +GL    + + A K F +ME +G+LP  F     IN
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643

Query: 552 CAPENGEKESG 562
            +   G  E  
Sbjct: 644 ESCNMGYWEEA 654



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 190/451 (42%), Gaps = 22/451 (4%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           ++L FF WV        +      +L IL  N    ++  ++  ++   SF++   + D 
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVV---SFEMHG-VVDV 156

Query: 182 ILYSYRMCDSSPLVFD---------------LLFKTYAHRKKFRNATDTFCQMRDYGFLP 226
           ++  +  C    LVFD                + +          A + +  M  +G  P
Sbjct: 157 LIAGHVXC---LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKP 213

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            + + N  L S     RVD AL    EM+     PN  T N++++   K G +E+A  + 
Sbjct: 214 TVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLI 273

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M + G   S  TYN LI+G C KGL   A      M      P + T+NTL++G CK 
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            ++      FS+M  +  +P++V++N+L+ GY + G       L++E+    +   ++TY
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N LI GLC  G    A  L K++    L P+  TY+ L+ G         A   +  M+ 
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G +P++  +   +    +  D   A  +  EML     PD I  +     L   G  E 
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           A  L   M   GL+P        IN   +NG
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 151/329 (45%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F  M    F P I S N  L     +  +  A   + E++   + P V T N ++H  C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++ A+ + K M   G  P + TY  L++G    G +S+A  F N M   G++P+   
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT I G  K      A  +  EM A    P+V+TYN  ++   Q GN E    L E M+
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G+  D +TY ++I G  K G  +KA  +  ++    + P+  TY+ LI     ++  +
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            AF  +  M+      N   +  +++  C     D A +   EM EK + P+    + L 
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +   + G  E A++L+R+M  R + P  F
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSF 671



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 16/379 (4%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD--------YGFLPIIE 229
           LF  +L+S R+    P V    F+    +  F+ +   FC + D        +    ++E
Sbjct: 87  LFIRVLHSMRI---RPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME 143

Query: 230 SCNKF----LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
               F    +  +L +  V   L F K M RN + P+V   N ++       ++ +A  V
Sbjct: 144 RVVSFEMHGVVDVLIAGHVXCLLVFDK-MIRNGLLPDVKNCNRILRVLRDENLLSKAKNV 202

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           +  ME  G  P+V TYNT++  +C +G +  A++  + M++ G  PN +T+N L+ G  K
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           KG+L +A  +  EM  + ++ +  TYN LING+ Q G       L EEM+       + T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ GLCK  +         D+ K+   P+  ++++L+ G C       AF L+  + 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
                P    +  L+   C     D A  +  EM ++ + PD    + L +G    G   
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 526 LAMKLFRKMEIRGLLPKGF 544
           +A   F +M  +GL P  F
Sbjct: 443 MARGFFNEMLSKGLKPDRF 461



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 2/325 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y        A   F +++    +P + + N  +  L     +D AL   KEM 
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT 417

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+++T  ++++   KLG +  A   F  M S G  P    YNT I G       S
Sbjct: 418 DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTS 477

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +A   +  M   G  P+VIT+N  +   C++G   EA  +   M +  + P+ VTY ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSL 434
           NG+ + G+      ++ EML  G+   ++TY  LI     +     A  Y  K L+K S+
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK-SV 596

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             N  TY+A+I G C+ +  + A++ +  M   G  PNK  + +L++  C    ++ A  
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 495 VLLEMLEKCMAPDSIILSELYSGLH 519
           +  EML++ + PDS   S     LH
Sbjct: 657 LYREMLDRKIQPDSFTHSVFLKNLH 681



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 6/216 (2%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +A    +EM      P+V T N+ +HA C+ G  E A ++ +NM S G IP   TY ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G    G L  A +  N M   G+ P+V+T+  LI     K  L  A   FS+M   +V 
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            NV+TYN +ING       +     ++EM   GI  +  +Y  LI   C  G  ++A  L
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            +++    + P++ T+S  +      KN  R +Q++
Sbjct: 658 YREMLDRKIQPDSFTHSVFL------KNLHRDYQVH 687



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 81/182 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++       +  F  A D    M   G +P   +    ++  + +  +  A   + E
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+V T  +++HA     +++ A   F  M       +V TYN +I+G C    
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A K+ + ME+ GI PN  ++  LI   C  G   EA R++ EM    + P+  T++ 
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675

Query: 374 LI 375
            +
Sbjct: 676 FL 677



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 97/227 (42%), Gaps = 20/227 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+++ +H L +   F+ +  +L  ++ SD   +P    D + Y+             +  
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMV-SDGL-IP----DHVTYTS------------IIN 538

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +      R A + F +M   G  P + +    + +    + +D+A  ++ +M    +  
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV T N +++  C    ++ A + F  ME  G +P+  +Y  LI+  CN G    A++  
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             M    IQP+  T +  +    +  ++H    + S ++  NV  N+
Sbjct: 659 REMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ--NVEDNI 703


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 9/300 (3%)

Query: 249 GFYKE-----MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           GF+KE     M   RISPNV T N ++ A CK   +++A+EV   M   G +P   TYN+
Sbjct: 97  GFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 156

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++ G C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA +IF  M    
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++ TY TL+ GY   G       L + M+RNGI  +   ++ L+    K+ K ++A 
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 276

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + +  L PNA TY  +I   C     E A   ++ MI  G RP+  ++  L+ + 
Sbjct: 277 LVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSL 336

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           C  + +++A E+ LEML++ +   +I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS--HCKEGRVIESGKLFDLMVRIGVKP 394



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 133/261 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+ F K+MR + + P+V T N +M 
Sbjct: 135 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 194

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 195 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 254

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ L+  + K+ K+ EA  +FS+M+   ++PN VTY T+I+   + G  E     +
Sbjct: 255 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 314

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G++ D + YN+LI  LC   K +KA  L  ++    +  +   ++++I   C  
Sbjct: 315 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 374

Query: 452 KNSERAFQLYKSMIRSGCRPN 472
                + +L+  M+R G +P+
Sbjct: 375 GRVIESGKLFDLMVRIGVKPD 395



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 143/295 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D    P + + N  +++L  ++ VD A+     M ++ + P+  T N ++H FC  G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A+   K M S G  P V TYN+L+   C  G  + A K  + M K G++P++ T+ 
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ G+  KG L E + +   M    + PN   ++ L+  Y +    E    ++ +M + 
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  + +TY  +I  LCK G+ + A    + +    L P++  Y++LI   C+    E+A
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            +L+  M+  G   +   F  ++ + C+      + ++   M+   + PD I L 
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 141/299 (47%), Gaps = 45/299 (15%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFN 337
           E A  VF  +   G IP V +YN L++G C++     A++  ++M  +G    P+V++++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GF K+G L        +M    +SPNVVTYN++I    +    +    +   M+++
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  D +TYN+++ G C  G+ K+A   +K +  + + P+  TY++L+   C       A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 458 FQLYKS-----------------------------------MIRSGCRPNKHIFEMLMST 482
            +++ S                                   M+R+G  PN ++F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + E  + A  V  +M ++ + P+++    +   L   G+ E AM  F +M   GL P
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 72/143 (50%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA ++K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+    N ++H+ C     E+A E+F  M   G   S   +N++I  HC +G +
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 315 SLAMKFKNLMEKNGIQPNVITFN 337
             + K  +LM + G++P++IT  
Sbjct: 378 IESGKLFDLMVRIGVKPDIITLG 400


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 216/463 (46%), Gaps = 58/463 (12%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS----DSFDLPS---------KL 178
             K +S TL+T+++V+  L+K  + + +  I   +L +    D+F   +         KL
Sbjct: 138 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKL 197

Query: 179 FDSILYSYRMCDSS--------PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
            ++++Y  +M ++          ++ +L+ +         +A   F ++ D   L    +
Sbjct: 198 DEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHF-T 256

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  +++L  +ER + A+ F K+M   R  P ++T   ++  F KLG ++ A+   K   
Sbjct: 257 FNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAV 316

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF------- 343
             GFIP   TY ++I G C  G +    +  + M   G +P+ +T+  LI GF       
Sbjct: 317 ERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIP 376

Query: 344 ----------------------------CKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
                                       CK G++ EA   F  M+       VVTY+ L+
Sbjct: 377 KAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALM 436

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+   GN      L+  ML  G + ++++YN +I GLC+ GK  KA +  + L +  L 
Sbjct: 437 DGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLC 496

Query: 436 PNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P+  T+++ + G C R ++     +L++SM+  G  PN H + +LM   C+    +   E
Sbjct: 497 PDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLE 556

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           +  EM+ + +APD ++ + L   L   G+ + A+++FR++E R
Sbjct: 557 IFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/305 (23%), Positives = 140/305 (45%), Gaps = 41/305 (13%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +     + F +MR+ G+ P   +    +   + ++ +  A   Y++M ++    +  T N
Sbjct: 339 RVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYN 398

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++   CK G +  A   F  ME  G + +V TY+ L+ G C++G +S A++    M   
Sbjct: 399 IILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR 458

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEAN---------------------------------- 353
           G +PN++++N +I G C+ GKL +A                                   
Sbjct: 459 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGD 518

Query: 354 --RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F  M +   SPN+ +Y+ L++G  + G  E+   ++ EM+  G+  D++ +N LI 
Sbjct: 519 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIR 578

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG--QCVRKNSERAFQLYKSMIRSGC 469
            LC  G+  +A  + ++L++ S  P+A +Y +L+    +C R    R    +  +   GC
Sbjct: 579 WLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHMKL--QGC 635

Query: 470 RPNKH 474
            P  +
Sbjct: 636 APRHY 640



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 158/378 (41%), Gaps = 10/378 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+  +   D    L D +      C    + F ++       K+   A     +  
Sbjct: 14  ALLNGLCKTGQLDRAMLLLDEM-----PCSPDMVAFTVVINGLCREKRLDEAFSVLERAV 68

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + N F+  L  +ERVD A    K+M   +  P   T   ++    K G ++
Sbjct: 69  RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 128

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ + + M   G  P++ TY  +I G    G +  A +    M  NG +P+   +  LI
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188

Query: 341 FGFCKKGKLHEA----NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            G  K GKL EA    N++     A  V P+VV +N +I      GN E   + ++E L 
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE-LD 247

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           + + +   T+N L+  LCK  +T++A   VK + +    P   TY++L+ G       + 
Sbjct: 248 DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDE 307

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A    K  +  G  P+   +  ++   C+    +   E   EM  +   PD++  + L  
Sbjct: 308 ALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALID 367

Query: 517 GLHHCGKDELAMKLFRKM 534
           G         A +++R+M
Sbjct: 368 GFMKAKMIPKAHRVYRQM 385



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 137/351 (39%), Gaps = 41/351 (11%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           C   L+ L  + ++D A+    EM     SP++    +V++  C+   ++ A  V +   
Sbjct: 12  CTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAV 68

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P   TYN  I G C    +  A +    M++    P  +T+  L+ G  K G+L 
Sbjct: 69  RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 128

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA  I  +M     SP + TY  +I+G  + G  E    ++ +ML NG + D   Y ALI
Sbjct: 129 EAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALI 188

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNAS------------------------------- 439
            GL K GK  +A   +  + +N                                      
Sbjct: 189 SGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDD 248

Query: 440 -------TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
                  T++ L+   C  + +E A    K M    C P    +  L+  F +    D A
Sbjct: 249 SLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
              L E +E+   PD++  + +  GL   G+ E   + F +M  RG  P  
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 359



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 103/192 (53%), Gaps = 2/192 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C ++ + +  L   +        A + F +M D G  P + S N  +  L  + ++  
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFC-KLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A  +++++ + R+ P+VYT N  +H  C +L  +   VE+F++M S G  P++ +Y+ L+
Sbjct: 483 AYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILM 542

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C  G L + ++  + M   G+ P+V+ FNTLI   C  G++ EA  +F E++  + +
Sbjct: 543 DGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-A 601

Query: 366 PNVVTYNTLING 377
           P+  +Y +L++ 
Sbjct: 602 PDAWSYWSLLDA 613


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 180/389 (46%), Gaps = 39/389 (10%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD---------- 240
           S PL+ D+    Y    +   A   F +M+  G  P + +CN  L++L+           
Sbjct: 123 SKPLL-DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLS 181

Query: 241 ----------------------------SERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
                                         R   A+    +MR     P+  T N ++  
Sbjct: 182 KAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDG 241

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            CK G +  A ++  +M++ G  P+ TT+N L+ G C  G L  A     LM +N + P+
Sbjct: 242 LCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPD 301

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             T+N +I GFCK+G++ EA R+  EM+   +SP+VVTYNTLING  + G+SE G  L E
Sbjct: 302 AWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIE 361

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM   G+K + +TYN ++    K+GK  +    V+ ++++  +P+  TY+ LI+  C   
Sbjct: 362 EMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVG 421

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             + AF+L   M R G + +      ++   C+    D A ++L     +    D +   
Sbjct: 422 KMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYG 481

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  G     K   A++L+ +M+ + ++P
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIP 510



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 178/381 (46%), Gaps = 35/381 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA-------- 247
           F++L        +F  A     +MRDYG  P   + N  L  L    R++ A        
Sbjct: 200 FNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMK 259

Query: 248 --------------------LGFYKE-------MRRNRISPNVYTLNMVMHAFCKLGIIE 280
                               LG+ KE       M +N + P+ +T N+++  FCK G I 
Sbjct: 260 NKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIA 319

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ + + ME++   P V TYNTLI+G    G      K    ME  G++PN +T+N ++
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMV 379

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             F KKGK+ E ++   +M+ +   P++VTYNTLI+ + +VG  +    L +EM R G+K
Sbjct: 380 KWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLK 439

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D +T N ++  LC+E K  +A  L+    +     +  +Y  LI G    + + +A +L
Sbjct: 440 MDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRL 499

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M      P+   +  +++  CQ    ++A + L E+LE  + PD I  + +  G   
Sbjct: 500 WDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQ 559

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G+ E A +   KM  +   P
Sbjct: 560 EGQVEKAFQFHNKMVEKNFKP 580



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 175/378 (46%), Gaps = 35/378 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++   +  + +   A     +M +    P + + N  ++   +    +      +EM 
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN  T N+++  F K G ++   +  + ME  G +P + TYNTLIS HC  G + 
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN---------------------- 353
            A +  + M + G++ + +T NT++   C++ KL EA+                      
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484

Query: 354 -------------RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                        R++ EMK   + P+++TYN++I G  Q+G +       +E+L +G+ 
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV 544

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D +TYN +I G C+EG+ +KA      + + +  P+  T + L+ G C     E+A +L
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           + + I  G   +   +  ++ + C+ + F  A ++L EM EK + PD    + +  GL  
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664

Query: 521 CGKDELAMKLFRKMEIRG 538
            G+ + A +   K+  +G
Sbjct: 665 AGRMKDAEEFISKIAEKG 682



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 148/309 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++ K +  + K      T  +M + G LP I + N  +S      ++D A     E
Sbjct: 373 VTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDE 432

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  +  +  TLN ++ A C+   ++ A ++  +    G+     +Y TLI G+     
Sbjct: 433 MGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEK 492

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S A++  + M++  I P++IT+N++I G C+ GK ++A     E+  + + P+ +TYNT
Sbjct: 493 ASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNT 552

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY Q G  E     + +M+    K D++T N L+ GLCKEG  +KA  L        
Sbjct: 553 IIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKG 612

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              +A +Y+ +I   C  K    AF L + M      P+ + +  ++           A 
Sbjct: 613 KDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAE 672

Query: 494 EVLLEMLEK 502
           E + ++ EK
Sbjct: 673 EFISKIAEK 681



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 3/226 (1%)

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS---EMGASLYEEMLR 396
           I  +   G+ H+A +IF+ MK   + P ++T NTL+N   +  +S    +  +++ + ++
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+K++  ++N LI G C E +  +A  ++  +      P+  TY+ ++ G C +     
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L   M   G  PN+  F +L+   C+      AA V+  M +  + PD+   + + S
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           G    G+   AM+L  +ME   L P        IN   E+G  E G
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEG 356



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/176 (22%), Positives = 77/176 (43%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ +        K   A D   ++ + G +P   + N  +       +V+ A  F+
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M      P+V T N ++   CK G++E+A+++F    S G      +YNT+I   C +
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                A      ME+  + P+  T+N ++ G    G++ +A    S++     S N
Sbjct: 631 KRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 42/198 (21%), Positives = 77/198 (38%), Gaps = 14/198 (7%)

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
            D +L S  + D   + ++ +   Y    +   A     +M +  F P + +CN  L  L
Sbjct: 535 LDELLESGLVPDE--ITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGL 592

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                ++ AL  +          +  + N ++ + CK      A ++ + ME     P  
Sbjct: 593 CKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDC 652

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TYN ++ G  + G +  A +F + + + G   N          F + GK  +A    SE
Sbjct: 653 YTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN---------QFLELGKRQDART--SE 701

Query: 359 MKATNVSPNVVTYNTLIN 376
           +      PN + Y+  IN
Sbjct: 702 I-PQEPHPNAIAYSNKIN 718


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 182/352 (51%), Gaps = 5/352 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K++        QM  +G  P + + N  ++S     R+  A    
Sbjct: 68  STVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVL 127

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++   C  G I  A+ +F  M   GF P+V TY TLI+G C  
Sbjct: 128 AKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKV 187

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  + A++    ME+   QP+V+ + ++I   CK  ++ EA  +FS+M    +SP++ TY
Sbjct: 188 GNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTY 247

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            +LI+    +   +   +L  +M+ + I  D++ ++ ++  LCKEGK  +A  +V  +  
Sbjct: 248 TSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMII 307

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY+AL+ G C++   + A +++ +M+ +G  PN   +  L++ +C+ +  D+
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           A  +  EM +K + P+++  + L   +H C  G+ + A+ LF +M   G +P
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTL---MHXCHVGRLQDAIALFHEMVAHGQIP 416



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 175/351 (49%), Gaps = 1/351 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    +V+  +  +    ++   A + F +M   G  P I +    + SL +        
Sbjct: 205 CQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVT 264

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  ++I P+V   + V+ A CK G I  A +V   M   G  P+V TYN L+ GH
Sbjct: 265 TLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGH 324

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  A+K  + M  NG  PNVI++NTLI G+CK  ++ +A  +F EM    + PN 
Sbjct: 325 CLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNT 384

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTL++    VG  +   +L+ EM+ +G   D+ TY  L+  LCK+    +A  L+K 
Sbjct: 385 VTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKT 443

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ +++ P+   Y+ +I G C     E A  ++ ++   G RPN   + ++++  C+   
Sbjct: 444 IEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGL 503

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            D A ++ +EM     +PD    + +  GL    +   A++L ++M  RG 
Sbjct: 504 LDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGF 554



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 162/318 (50%), Gaps = 1/318 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +      + SL    +V  A   + +M    ISP+++T   ++H+ C L   +    +
Sbjct: 207 PDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTL 266

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M +   +P V  ++T++   C +G ++ A    ++M   G++PNV+T+N L+ G C 
Sbjct: 267 LNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCL 326

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ EA ++F  M     +PNV++YNTLINGY ++   +    L+EEM +  +  + +T
Sbjct: 327 QSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L +  C  G+ + A  L  ++  +  +P+ +TY  L+   C + + + A  L K++ 
Sbjct: 387 YNTL-MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            S   P+  I+ +++   C+  + + A ++   +  K + P+    + + +GL   G  +
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A KLF +M+  G  P G
Sbjct: 506 EANKLFMEMDGNGCSPDG 523



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 145/308 (47%), Gaps = 1/308 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F  +        K   A D    M   G  P + + N  +        +D A+  +  
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDT 339

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N  +PNV + N +++ +CK+  +++A  +F+ M     IP+  TYNTL+   C+ G 
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGR 398

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   + M  +G  P++ T+  L+   CKK  L EA  +   ++ +N+ P++  Y  
Sbjct: 399 LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTI 458

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  + G  E    ++  +   G++ ++ TY  +I GLC+ G   +A  L  ++D N 
Sbjct: 459 VIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNG 518

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ +  G    K + RA QL + M+  G   +     +L+   C ++      
Sbjct: 519 CSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVK 578

Query: 494 EVLLEMLE 501
           ++L E ++
Sbjct: 579 QILSEFVQ 586



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 133/280 (47%), Gaps = 1/280 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + ++ L   +  + +   A   F  M   G+ P + S N  ++     +R+D 
Sbjct: 308 RGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDK 367

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++EM +  + PN  T N +MH  C +G ++ A+ +F  M + G IP + TY  L+ 
Sbjct: 368 ATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLD 426

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C K  L  AM     +E + + P++  +  +I G C+ G+L  A  IFS + +  + P
Sbjct: 427 YLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRP 486

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV TY  +ING  + G  +    L+ EM  NG   D  TYN +  GL +  +  +A  L+
Sbjct: 487 NVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLL 546

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           +++       + ST + L+   C  K  +   Q+    ++
Sbjct: 547 QEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 586



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 154/349 (44%), Gaps = 22/349 (6%)

Query: 76  GQDLDFVNIAYSHLIHS-----DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV 130
           GQ +      Y+ LIHS     +WK +T L   +       +  K+  D V+   F T V
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM-------INSKIMPDVVI---FSTVV 286

Query: 131 QTHKPSSLTLETHSIVLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
                     E H +V  ++ +  +    +  +++ G       D   K+FD+++++   
Sbjct: 287 DALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYA 346

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
              + + ++ L   Y   ++   AT  F +M     +P   + N  +       R+  A+
Sbjct: 347 --PNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXC-HVGRLQDAI 403

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM  +   P++ T  +++   CK   ++ A+ + K +E     P +  Y  +I G 
Sbjct: 404 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGM 463

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G L  A   F NL  K G++PNV T+  +I G C++G L EAN++F EM     SP+
Sbjct: 464 CRAGELEAARDIFSNLSSK-GLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 522

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             TYNT+  G  Q   +     L +EML  G   D+ T   L+  LC +
Sbjct: 523 GCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDD 571



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 97/232 (41%), Gaps = 11/232 (4%)

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +LSL   F +L   N      + FNTL           +A   F+ M   +  P+ V +N
Sbjct: 25  VLSLPPYFSSL-SHNRFHSKSLNFNTL----------DDALSSFNRMLHMHPPPSTVDFN 73

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L+    +        SL  +M   GI  D+ T N LI   C   +   A  ++  + K 
Sbjct: 74  RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKL 133

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P+ +T++ LI G CV      A  L+  MI  G +PN   +  L++  C+  + + A
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 193

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +L  M +    PD ++ + +   L    +   A  LF KM  +G+ P  F
Sbjct: 194 IRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 219/489 (44%), Gaps = 44/489 (8%)

Query: 83  NIAYSHLIHSDWKK---LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLT 139
           N+A S L   +W+K   L +L +H++P     V+   + D  + + FF WV  H      
Sbjct: 44  NVA-SLLKSPNWEKNSSLKSLVSHMSPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFD 102

Query: 140 LETHSIVLHILTKNRKFKSSESILRGIL---------------------DSDSFDLPSKL 178
               + +L ++  +  F+ +  ++  ++                     +   F L    
Sbjct: 103 PTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPC 162

Query: 179 FDSILYS-------------YRMCDSSPLVFDLL-FKTYAH---RKKFRNATDTF-CQMR 220
           + S+L S             YR  ++   V  ++ ++T  +   +  +  A + F C++ 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGII 279
             GFL         L        +  AL  +  M R    +PN  + ++++H  C++G +
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A  +   M   G  PS  TY  LI   C++GL+  A    + M   G +PNV T+  L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G C+ GK+ EAN +  +M    + P+V+TYN LINGY + G       L   M +   
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K ++ T+N L+ GLC+ GK  KA +L+K +  N L P+  +Y+ LI G C   +   A++
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L  SM      P+   F  +++ FC+    D A+  L  ML K ++ D +  + L  G+ 
Sbjct: 463 LLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVC 522

Query: 520 HCGKDELAM 528
           + GK   A+
Sbjct: 523 NVGKTRDAL 531



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 190/432 (43%), Gaps = 71/432 (16%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FD ++     C  + + + +L        +   A     QM + G  P   +    + 
Sbjct: 251 KVFD-LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +L D   +D A   + EM      PNV+T  +++   C+ G IE A  V + M   G  P
Sbjct: 310 ALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFP 369

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           SV TYN LI+G+C  G +  A +   +MEK   +PNV TFN L+ G C+ GK ++A  + 
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 357 SEMKATNVSPNVVTYNTLING-----------------------------------YGQV 381
             M    +SP++V+YN LI+G                                   + + 
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQ 489

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL------------ 429
           G +++ ++    MLR GI +D +T   LI G+C  GKT+ A ++++ L            
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSL 549

Query: 430 -----------------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
                                  +K  LVP+  TY+ L+ G     +   +F++ + M  
Sbjct: 550 NVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKL 609

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN + + ++++  CQ    + A ++L  M +  ++P+ +  + +  G  + GK + 
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 527 AMKLFRKMEIRG 538
           A++  R M  RG
Sbjct: 670 ALETVRAMVERG 681



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 162/391 (41%), Gaps = 37/391 (9%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++ + D    D    LFD ++   R C  +   + +L        K   A     +M  
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIA--RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  ++      RV  A      M +    PNV T N +M   C++G   +
Sbjct: 365 DGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV + K M   G  P + +YN LI G C +G +++A K    M    ++P+ +TF  +I 
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIIN 484

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE--------- 392
            FCK+GK   A+     M    +S + VT  TLI+G   VG +     + E         
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLT 544

Query: 393 ---------EMLRNGIKV-----------------DILTYNALILGLCKEGKTKKAAYLV 426
                    +ML  G K+                  ++TY  L+ GL + G    +  ++
Sbjct: 545 TPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRML 604

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +  +  +PN   Y+ +I G C     E A +L  +M  SG  PN   + +++  +  N
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
              DRA E +  M+E+    +  I S L  G
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLRG 695



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 135/294 (45%), Gaps = 41/294 (13%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + + + R+    ++LN+++    K   ++  + +   +  +G +PSV TY TL+ 
Sbjct: 530 ALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVD 589

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G +S + +   LM+ +G  PNV  +  +I G C+ G++ EA ++ S M+ + VSP
Sbjct: 590 GLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG-------------- 412
           N VTY  ++ GY   G  +        M+  G +++   Y++L+ G              
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPE 709

Query: 413 --------------------------LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                                     LCKEG+T ++  LV+ + K+ +    +    ++ 
Sbjct: 710 CIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGLVQTILKSGVFLEKAI-DIIME 768

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
             C +K   +  +L   +++SG  P+   F +++    +  D +RA E+++E+L
Sbjct: 769 SYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELL 822


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 205/415 (49%), Gaps = 30/415 (7%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL ++SI++  L K+R+                 D   +LF+ +     M D   + +  
Sbjct: 457 TLISYSIIIDGLCKDRRE----------------DEARELFEEMKAQGIMPDV--ISYTT 498

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +    K+  A   F +M D G  P + + +  +  L    +V  A    + + +  
Sbjct: 499 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              +V T   ++   C    I +A ++F  M+ +G +P+V T  TL+ G C  G + +A+
Sbjct: 559 CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 618

Query: 319 KF-KNLMEKN---GI--QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +  KN++      GI  +PN I+++ +I G CK G+  EA  +F EMKA  V P+V++Y 
Sbjct: 619 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 678

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+G+ + G  +    L+ EM+  G++ D+ T++ LI  LCKEGK  +A  L++ + + 
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             +PN  TY+ L+ G C+      A QL+  M + GC P+   +  LM   CQ  +   A
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798

Query: 493 AEVLLEMLEKC------MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E+  +ML           PD I  S +  GL   G+++ A +LF++M+  G++P
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIP 853



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 191/410 (46%), Gaps = 54/410 (13%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           +R C    + +  L K    + +   AT  F  M+  G  P   +    +  L  + +++
Sbjct: 263 HRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKIN 322

Query: 246 IALGFYKEMRRNR-------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           IAL  ++EM  +        I P+V T +M++   CK G +  A E+ + M   G I  +
Sbjct: 323 IALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 382

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG------KLH-- 350
            TY+TLI G C +  +S A      M+K G +P+ IT+ TL+ G C+ G      +LH  
Sbjct: 383 VTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 442

Query: 351 ---------------------------------EANRIFSEMKATNVSPNVVTYNTLING 377
                                            EA  +F EMKA  + P+V++Y TLI+G
Sbjct: 443 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +   G  E    L+ EML  GI+ D+ T + LI  LCK+GK  +A  L++ + +   + +
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             T + L+ G C++    +A QL+  M + GC PN      LM   CQ+ +   A E+  
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622

Query: 498 EMLEKC------MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ML           P++I  S +  GL  CG+++ A +LF++M+  G++P
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 672



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 178/373 (47%), Gaps = 16/373 (4%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
            +KL + ++   R C    +    L K    + +   AT  F +M+  G +P + +C   
Sbjct: 547 ANKLLEVVIQ--RGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATL 604

Query: 235 LSSLLDSERVDIALGFYKEMRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           +  L  S  + IAL  +K M  +         PN  + ++++   CK G  + A E+FK 
Sbjct: 605 MKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKE 664

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+++G IP V +Y +LI G C  G    A    N M   G+QP+V TF+ LI   CK+GK
Sbjct: 665 MKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGK 724

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EAN +   M      PN VTY TL+ G            L+ +M + G   D++TY  
Sbjct: 725 VIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGT 784

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNS------LVPNASTYSALITGQCVRKNSERAFQLYK 462
           L+ GLC+ G  K A  L K +  ++        P+  +YS +I G C     + A +L+K
Sbjct: 785 LMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFK 844

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M   G  PN   +  L+  FC++   + A  +  EM+++ +  +++  S +  G   C 
Sbjct: 845 EMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGF--CK 902

Query: 523 KDELAMKLFRKME 535
           + ++   LF+KME
Sbjct: 903 EGQIDKALFQKME 915



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 185/410 (45%), Gaps = 56/410 (13%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + +  L K      +   AT  F  M+  G  P   +    +  L  +  ++I
Sbjct: 83  RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINI 142

Query: 247 ALGFYKEMRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           AL  ++EM  +      +  P + + ++++   CK    + A E+FK M++ G +P V +
Sbjct: 143 ALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS 202

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV--------------------------- 333
           Y +LI G C+ G    A    N M   GIQP+V                           
Sbjct: 203 YTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMV 262

Query: 334 --------ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
                   +T++TLI G C K ++ EA ++F  MK     P+ + Y TL+ G  Q G   
Sbjct: 263 HRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKIN 322

Query: 386 MGASLYEEMLRN----GIKV---DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           +   L++EML +    GIK    D+ T + LI  LCKEGK  +A  L++ + +   + + 
Sbjct: 323 IALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 382

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS LI G C+      A  L+ SM + GCRP+   +  LM   CQ  + + A ++  E
Sbjct: 383 VTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 442

Query: 499 MLE-------KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML        KC  P  I  S +  GL    +++ A +LF +M+ +G++P
Sbjct: 443 MLNDTGRYGIKC-KPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMP 491



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 191/399 (47%), Gaps = 19/399 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-----YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           ++++G+  + + ++  +L   +L     Y  + C  + + + ++       ++   A + 
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIK-CKPTLISYSIIIDGLCKDRREDEAREL 187

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M+  G +P + S    +     S + + A   + EM    I P+V T  +++  FCK
Sbjct: 188 FKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCK 247

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G +  A E+ + M   G I  + TY+TLI G C K  +S A +    M+K G +P+ I 
Sbjct: 248 EGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIA 307

Query: 336 FNTLIFGFCKKGKLHEANRIFSEM-------KATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           + TL+ G C+ GK++ A  +  EM           + P+V T + LI+   + G      
Sbjct: 308 YGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEAN 367

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L E M++ G  +DI+TY+ LI GLC E +  +A +L   + K    P+A TY  L+ G 
Sbjct: 368 ELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGL 427

Query: 449 CVRKNSERAFQLYKSMI----RSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           C   N   A QL++ M+    R G  C+P    + +++   C++   D A E+  EM  +
Sbjct: 428 CQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQ 487

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + PD I  + L  G    GK E A  LF +M   G+ P
Sbjct: 488 GIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQP 526



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 169/324 (52%), Gaps = 10/324 (3%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S +  +  L    R D A   ++EM+   I P+V +   ++H FC  G  E+A  +
Sbjct: 456 PTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCL 515

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M  +G  P VTT + LI   C KG +  A K   ++ + G   +V+T  TL+ G C 
Sbjct: 516 FNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN----GI-- 399
           K ++ +A ++F +M+     PNVVT  TL+ G  Q GN ++   L++ ML +    GI  
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K + ++Y+ +I GLCK G+  +A  L K++    ++P+  +Y++LI G C     + A  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+  M+  G +P+   F +L+   C+      A E+L  M+++   P+++  + L  GL 
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGL- 754

Query: 520 HCGKDEL--AMKLFRKMEIRGLLP 541
            C  D +  A +LF KM+  G LP
Sbjct: 755 -CMNDRISEATQLFMKMQKLGCLP 777



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 170/379 (44%), Gaps = 57/379 (15%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIAL---------GFYKEMRRNRISPNVYTLNMV 269
           MR  G  P   + N  ++ L + +RV+  L         G+  ++    I P+V T +M+
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +   CK G +  A E+ + M   G I  + TY+TLI G C +  +S A      M+K G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 330 QPNVITFNTLIFGFCKKG------KLH--------------------------------- 350
           +P+ IT+ TL+ G C+ G      +LH                                 
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 351 --EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             EA  +F EMKA  + P+V++Y +LI+G+   G  E    L+ EML  GI+ D+ T   
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI   CKEGK  +A  L++ +     + +  TYS LI G C++     A QL+ SM + G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE-------KCMAPDSIILSELYSGLHHC 521
           CRP+   +  LM   CQ    + A  +  EML        KC+ PD    S L   L   
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 522 GKDELAMKLFRKMEIRGLL 540
           GK   A +L   M  RG +
Sbjct: 361 GKVIEANELLEVMIQRGCI 379



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 152/311 (48%), Gaps = 10/311 (3%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYS---YRM-CDSSPLVFDLLFKTYAHRKKFRNAT 213
           +  ++++G+  S +  +  +L  ++L     Y + C  + + + ++        +   A 
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           + F +M+  G +P + S    +     S +   A   + EM    + P+V T ++++   
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G +  A E+ + M   G IP+  TY TL+ G C    +S A +    M+K G  P+V
Sbjct: 720 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 779

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEM------KATNVSPNVVTYNTLINGYGQVGNSEMG 387
           +T+ TL+ G C+ G +  A  +  +M        TN  P+V++Y+ +I+G  + G  +  
Sbjct: 780 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEA 839

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L++EM   G+  ++++Y +LI G C+ GK + A +L  ++    +  NA TYS +I G
Sbjct: 840 RELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHG 899

Query: 448 QCVRKNSERAF 458
            C     ++A 
Sbjct: 900 FCKEGQIDKAL 910


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 185/371 (49%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++ L   +  +  F  A D   +M +    P + + N  +  L    +V      +
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M +++ +P++ + N +++ +C+ G I  A  +F  ++    +P+V TYNTLI G C  
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A++ K  M   G+ P++ T+  L+ G  K G +  A   F+EM +  + P+   Y
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT I G  ++ ++ +  S+ EEML  G   D++TYN  +  LC++G  ++A  L++++  
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVS 523

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           + L+P+  TY+++I G     +  +A +++  M+  G  P+   + +L+      +  D 
Sbjct: 524 DGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDL 583

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           A     +MLEK +  + I  + + +GL    + + A K F +ME +G+LP  F     IN
Sbjct: 584 AFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILIN 643

Query: 552 CAPENGEKESG 562
            +   G  E  
Sbjct: 644 ESCNMGYWEEA 654



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 190/451 (42%), Gaps = 22/451 (4%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           ++L FF WV        +      +L IL  N    ++  ++  ++   SF++   + D 
Sbjct: 101 VALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVV---SFEMHG-VVDV 156

Query: 182 ILYSYRMCDSSPLVFD---------------LLFKTYAHRKKFRNATDTFCQMRDYGFLP 226
           ++  +  C    LVFD                + +          A + +  M  +G  P
Sbjct: 157 LIAGHVXC---LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKP 213

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
            + + N  L S     RVD AL    EM+     PN  T N++++   K G +E+A  + 
Sbjct: 214 TVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLI 273

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M + G   S  TYN LI+G C KGL   A      M      P + T+NTL++G CK 
Sbjct: 274 EEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKW 333

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            ++      FS+M  +  +P++V++N+L+ GY + G       L++E+    +   ++TY
Sbjct: 334 VQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITY 393

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N LI GLC  G    A  L K++    L P+  TY+ L+ G         A   +  M+ 
Sbjct: 394 NTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLS 453

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G +P++  +   +    +  D   A  +  EML     PD I  +     L   G  E 
Sbjct: 454 KGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEE 513

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           A  L   M   GL+P        IN   +NG
Sbjct: 514 ACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 151/329 (45%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F  M    F P I S N  L     +  +  A   + E++   + P V T N ++H  C 
Sbjct: 343 FSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCM 402

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G ++ A+ + K M   G  P + TY  L++G    G +S+A  F N M   G++P+   
Sbjct: 403 WGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFA 462

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +NT I G  K      A  +  EM A    P+V+TYN  ++   Q GN E    L E M+
Sbjct: 463 YNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            +G+  D +TY ++I G  K G  +KA  +  ++    + P+  TY+ LI     ++  +
Sbjct: 523 SDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLD 582

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            AF  +  M+      N   +  +++  C     D A +   EM EK + P+    + L 
Sbjct: 583 LAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILI 642

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +   + G  E A++L+R+M  R + P  F
Sbjct: 643 NESCNMGYWEEALRLYREMLDRKIQPDSF 671



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 172/379 (45%), Gaps = 16/379 (4%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD--------YGFLPIIE 229
           LF  +L+S R+    P V    F+    +  F+ +   FC + D        +    ++E
Sbjct: 87  LFIRVLHSMRI---RPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVME 143

Query: 230 SCNKF----LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
               F    +  +L +  V   L F K M RN + P+V   N ++       ++ +A  V
Sbjct: 144 RVVSFEMHGVVDVLIAGHVXCLLVFDK-MIRNGLLPDVKNCNRILRVLRDENLLSKAKNV 202

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           +  ME  G  P+V TYNT++  +C +G +  A++  + M++ G  PN +T+N L+ G  K
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           KG+L +A  +  EM  + ++ +  TYN LING+ Q G       L EEM+       + T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ GLCK  +         D+ K+   P+  ++++L+ G C       AF L+  + 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
                P    +  L+   C     D A  +  EM ++ + PD    + L +G    G   
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 526 LAMKLFRKMEIRGLLPKGF 544
           +A   F +M  +GL P  F
Sbjct: 443 MARGFFNEMLSKGLKPDRF 461



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 151/325 (46%), Gaps = 2/325 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y        A   F +++    +P + + N  +  L     +D AL   KEM 
Sbjct: 358 FNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMT 417

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+++T  ++++   KLG +  A   F  M S G  P    YNT I G       S
Sbjct: 418 DQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTS 477

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           +A   +  M   G  P+VIT+N  +   C++G   EA  +   M +  + P+ VTY ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSL 434
           NG+ + G+      ++ EML  G+   ++TY  LI     +     A  Y  K L+K S+
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEK-SV 596

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             N  TY+A+I G C+ +  + A++ +  M   G  PNK  + +L++  C    ++ A  
Sbjct: 597 PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALR 656

Query: 495 VLLEMLEKCMAPDSIILSELYSGLH 519
           +  EML++ + PDS   S     LH
Sbjct: 657 LYREMLDRKIQPDSFTHSVFLKNLH 681



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 6/216 (2%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +A    +EM      P+V T N+ +HA C+ G  E A ++ +NM S G IP   TY ++I
Sbjct: 478 VAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSII 537

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G    G L  A +  N M   G+ P+V+T+  LI     K  L  A   FS+M   +V 
Sbjct: 538 NGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVP 597

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            NV+TYN +ING       +     ++EM   GI  +  +Y  LI   C  G  ++A  L
Sbjct: 598 ANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRL 657

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            +++    + P++ T+S  +      KN  R +Q++
Sbjct: 658 YREMLDRKIQPDSFTHSVFL------KNLHRDYQVH 687



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 81/182 (44%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++       +  F  A D    M   G +P   +    ++  + +  +  A   + E
Sbjct: 496 ITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNE 555

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++P+V T  +++HA     +++ A   F  M       +V TYN +I+G C    
Sbjct: 556 MLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRR 615

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A K+ + ME+ GI PN  ++  LI   C  G   EA R++ EM    + P+  T++ 
Sbjct: 616 MDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSV 675

Query: 374 LI 375
            +
Sbjct: 676 FL 677



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 51/237 (21%), Positives = 101/237 (42%), Gaps = 21/237 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+++ +H L +   F+ +  +L  ++ SD   +P    D + Y+             +  
Sbjct: 497 TYNVFVHALCQQGNFEEACDLLENMV-SDGL-IP----DHVTYTS------------IIN 538

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            +      R A + F +M   G  P + +    + +    + +D+A  ++ +M    +  
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV T N +++  C    ++ A + F  ME  G +P+  +Y  LI+  CN G    A++  
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV-VTYNTLING 377
             M    IQP+  T +  +    +  ++H    + S ++  NV  N+ V    LI G
Sbjct: 659 REMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQ--NVEDNINVRIEMLIGG 713


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G+  S   D    +   ++ S   C  + +++  L KT+    +F +A     +M+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I   N  +  L  ++R+D A  F  EM  N + PN +T    +  + +     
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +  K M   G +P+      LI+ +C KG +  A      M   GI  +  T+  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K  K+ +A  IF EM+   ++P+V +Y  LING+ ++GN +  +S+++EM+  G+ 
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++ YN L+ G C+ G+ +KA  L+ ++    L PNA TY  +I G C   +   AF+L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M   G  P+  ++  L+   C+  D +RA  +     + C A  +   + L + +  
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC-ASSTAPFNALINWVFK 778

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKL 547
            GK EL  ++  +     L+   FD+ 
Sbjct: 779 FGKTELKTEVLNR-----LMDGSFDRF 800



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 166/367 (45%), Gaps = 2/367 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD ++ S  +  +    +  L + Y   K  R   +   +M+    +    +    +  
Sbjct: 369 LFDGMIASGLIPQAQA--YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           +  S  +D A    KEM  +   PNV     ++  F +      A+ V K M+  G  P 
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  YN+LI G      +  A  F   M +NG++PN  T+   I G+ +  +   A++   
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM+   V PN V    LIN Y + G      S Y  M+  GI  D  TY  L+ GL K  
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K   A  + +++    + P+  +Y  LI G     N ++A  ++  M+  G  PN  I+ 
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           ML+  FC++ + ++A E+L EM  K + P+++    +  G    G    A +LF +M+++
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 538 GLLPKGF 544
           GL+P  F
Sbjct: 727 GLVPDSF 733



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 211/499 (42%), Gaps = 60/499 (12%)

Query: 89  LIHSDWKKL---TALSTHLTPFRVKHVLL-KVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           L   +W+     + LS  + P  V  VL  K   D    L FF WV + K +   L++ S
Sbjct: 42  LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLP-SKLFDSIL---YSYRMCDSSPLVFDLLF 200
            +   L     F+ + S++  +++ +    P ++++ SI+     +       ++F +LF
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERN---WPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             Y  ++    A   F        +P +  C   L +LL   R+D+    YK M    + 
Sbjct: 159 DGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
            +V T +M++ A C+ G ++   +V    E         T    + G         A+K 
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFRTATLNVDG---------ALKL 264

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K  M   G+ P   T++ LI G CK  +L +A  +  EM +  VS +  TY+ LI+G  +
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             N++    L  EM+ +GI +    Y+  I  + KEG  +KA  L   +  + L+P A  
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 441 YSALITGQCVRKNSERAFQL-----------------------------------YKSMI 465
           Y++LI G C  KN  + ++L                                    K MI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            SGCRPN  I+  L+ TF QN  F  A  VL EM E+ +APD    + L  GL    + +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 526 LAMKLFRKMEIRGLLPKGF 544
            A     +M   GL P  F
Sbjct: 505 EARSFLVEMVENGLKPNAF 523



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 45/408 (11%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  + K   A   +  M D G L   ++    ++ L  +++VD A   ++EMR   
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+P+V++  ++++ F KLG +++A  +F  M   G  P+V  YN L+ G C  G +  A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G+ PN +T+ T+I G+CK G L EA R+F EMK   + P+   Y TL++G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 379 GQVGNSEMGASLYE---------------------EMLRNGIKVDIL------------- 404
            ++ + E   +++                      +  +  +K ++L             
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 405 ----TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TYN +I  LCKEG  + A  L   +   +L+P   TY++L+ G          F +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS-----ELY 515
           +   I +G  P+  ++ ++++ F +     +A  ++ +M  K    D   LS      L 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPENGEKES 561
           SG    G+ E+A K+   M     +P     +  IN  C   N   E+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 4/358 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +D+L       K+  +A     +M   G      + +  +  LL     D A G   EM 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + I+   Y  +  +    K G++E+A  +F  M + G IP    Y +LI G+C +  + 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +    M+K  I  +  T+ T++ G C  G L  A  I  EM A+   PNVV Y TLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 376 NGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             + Q  NS  G ++   +EM   GI  DI  YN+LI+GL K  +  +A   + ++ +N 
Sbjct: 460 KTFLQ--NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PNA TY A I+G         A +  K M   G  PNK +   L++ +C+      A 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
                M+++ +  D+   + L +GL    K + A ++FR+M  +G+ P  F     IN
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 61/387 (15%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           +T++++++ L KN K   +E I R        ++  K     ++SY           +L 
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFR--------EMRGKGIAPDVFSY----------GVLI 634

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             ++     + A+  F +M + G  P +   N  L     S  ++ A     EM    + 
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----------- 309
           PN  T   ++  +CK G +  A  +F  M+  G +P    Y TL+ G C           
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 310 ---NK-----------GLLSLAMKFKNLMEKNGI-------------QPNVITFNTLIFG 342
              NK            L++   KF     K  +             +PN +T+N +I  
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A  +F +M+  N+ P V+TY +L+NGY ++G       +++E +  GI+ D
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA-----STYSALITGQCVRKNSERA 457
            + Y+ +I    KEG T KA  LV  +   + V +      ST  AL++G       E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            ++ ++M+R    P+      L++  C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+     +R+  A+    +M 
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+  T   ++H          AV +   M   G  P++ TY  +++G C +G   
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+   N ME   I+ +V+ FNT+I   CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L  +M+   I  +++T+NALI    KEGK  +A  L  D+ K S+ 
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++L+ G C+    ++A Q+++ M+   C P+   +  L+  FC+++  +   E+
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  + +  D++  + L  GL H G  + A K+F++M   G+ P
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 183/380 (48%), Gaps = 14/380 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +  R+ D+  LV  ++          F T  H      K   A     +M  
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L      D+AL    +M   +I  +V   N ++ + CK   ++ 
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +FK ME+ G  P+V TY++LIS  C+ G  S A +  + M +  I PN++TFN LI 
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GK  EA +++ +M   ++ P++ TYN+L+NG+      +    ++E M+      
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TYN LI G CK  + +    L +++    LV +  TY+ LI G     + + A +++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+  G  P+   + +L+   C N   ++A EV   M +  +  D  I + +  G+   
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +    LF  + ++G+ P
Sbjct: 519 GKVDDGWDLFCSLSLKGVKP 538



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 13/362 (3%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  K  +A   F  M     LP I   NK LS++   ++ D+ +   ++M+R  I   +Y
Sbjct: 62  HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N++++ FC+   I  A+ +   M  +G+ PS+ T ++L++G+C+   +S A+   + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G +P+ ITF TLI G     K  EA  +   M      PN+VTY  ++NG  + G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           ++  +L  +M    I+ D++ +N +I  LCK      A  L K+++   + PN  TYS+L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+  C       A QL   MI     PN   F  L+  F +   F  A ++  +M+++ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 505 APDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
            PD    + L +G   C  D L  A ++F  M  +   P         KGF K + +   
Sbjct: 362 DPDIFTYNSLVNGF--CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419

Query: 554 PE 555
            E
Sbjct: 420 TE 421



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 165/345 (47%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++F+ +  +    +   +A + F +M   G  P + + +  +S L    R   A  
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PN+ T N ++ AF K G    A +++ +M      P + TYN+L++G C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +    M      P+V+T+NTLI GFCK  ++ +   +F EM    +  + V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI G    G+ +    ++++M+ +G+  DI+TY+ L+ GLC  GK +KA  +   +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ +  +   Y+ +I G C     +  + L+ S+   G +PN   +  ++S  C     
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             A  +L +M E    P+S   + L       G    + +L R+M
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 2/280 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++   +    F    KL+D ++   R  D     ++ L   +    +   A   F  M 
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P + + N  +     S+RV+     ++EM    +  +  T   ++      G  +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +VFK M S G  P + TY+ L+ G CN G L  A++  + M+K+ I+ ++  + T+I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK GK+ +   +F  +    V PNVVTYNT+I+G       +   +L ++M  +G  
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            +  TYN LI    ++G    +A L++++     V +AST
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   S   +  ++LF  +  S+R      + +  L +   H     NA   F QM 
Sbjct: 405 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + +  L  L ++ +++ AL  +  M+++ I  ++Y    ++   CK G ++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++F ++   G  P+V TYNT+ISG C+K LL  A      M+++G  PN  T+NTLI
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++     +  T   + N
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 186/387 (48%), Gaps = 8/387 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G+  S   D    +   ++ S   C  + +++  L KT+    +F +A     +M+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I   N  +  L  ++R+D A  F  EM  N + PN +T    +  + +     
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +  K M   G +P+      LI+ +C KG +  A      M   GI  +  T+  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K  K+ +A  IF EM+   ++P+V +Y  LING+ ++GN +  +S+++EM+  G+ 
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++ YN L+ G C+ G+ +KA  L+ ++    L PNA TY  +I G C   +   AF+L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M   G  P+  ++  L+   C+  D +RA  +     + C A  +   + L + +  
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC-ASSTAPFNALINWVFK 778

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKL 547
            GK EL  ++  +     L+   FD+ 
Sbjct: 779 FGKTELKTEVLNR-----LMDGSFDRF 800



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 166/367 (45%), Gaps = 2/367 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD ++ S  +  +    +  L + Y   K  R   +   +M+    +    +    +  
Sbjct: 369 LFDGMIASGLIPQAQA--YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           +  S  +D A    KEM  +   PNV     ++  F +      A+ V K M+  G  P 
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  YN+LI G      +  A  F   M +NG++PN  T+   I G+ +  +   A++   
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM+   V PN V    LIN Y + G      S Y  M+  GI  D  TY  L+ GL K  
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K   A  + +++    + P+  +Y  LI G     N ++A  ++  M+  G  PN  I+ 
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           ML+  FC++ + ++A E+L EM  K + P+++    +  G    G    A +LF +M+++
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 538 GLLPKGF 544
           GL+P  F
Sbjct: 727 GLVPDSF 733



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 210/499 (42%), Gaps = 60/499 (12%)

Query: 89  LIHSDWKKL---TALSTHLTPFRVKHVLL-KVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           L   +W+     + LS  + P  V  VL  K   D    L FF WV + K +   L++ S
Sbjct: 42  LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLP-SKLFDSIL---YSYRMCDSSPLVFDLLF 200
            +   L     F+ + S++  +++ +    P ++++ SI+     +       ++F +LF
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERN---WPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             Y  +     A   F        +P +  C   L +LL   R+D+    YK M    + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
            +V T +M++ A C+ G ++   +V    E         T    + G         A+K 
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFRTATLNVDG---------ALKL 264

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K  M   G+ P   T++ LI G CK  +L +A  +  EM +  VS +  TY+ LI+G  +
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             N++    L  EM+ +GI +    Y+  I  + KEG  +KA  L   +  + L+P A  
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 441 YSALITGQCVRKNSERAFQL-----------------------------------YKSMI 465
           Y++LI G C  KN  + ++L                                    K MI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            SGCRPN  I+  L+ TF QN  F  A  VL EM E+ +APD    + L  GL    + +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 526 LAMKLFRKMEIRGLLPKGF 544
            A     +M   GL P  F
Sbjct: 505 EARSFLVEMVENGLKPNAF 523



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 45/408 (11%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  + K   A   +  M D G L   ++    ++ L  +++VD A   ++EMR   
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+P+V++  ++++ F KLG +++A  +F  M   G  P+V  YN L+ G C  G +  A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G+ PN +T+ T+I G+CK G L EA R+F EMK   + P+   Y TL++G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 379 GQVGNSEMGASLYE---------------------EMLRNGIKVDIL------------- 404
            ++ + E   +++                      +  +  +K ++L             
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 405 ----TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TYN +I  LCKEG  + A  L   +   +L+P   TY++L+ G          F +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS-----ELY 515
           +   I +G  P+  ++ ++++ F +     +A  ++ +M  K    D   LS      L 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPENGEKES 561
           SG    G+ E+A K+   M     +P     +  IN  C   N   E+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 4/358 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +D+L       K+  +A     +M   G      + +  +  LL     D A G   EM 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + I+   Y  +  +    K G++E+A  +F  M + G IP    Y +LI G+C +  + 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +    M+K  I  +  T+ T++ G C  G L  A  I  EM A+   PNVV Y TLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 376 NGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             + Q  NS  G ++   +EM   GI  DI  YN+LI+GL K  +  +A   + ++ +N 
Sbjct: 460 KTFLQ--NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PNA TY A I+G         A +  K M   G  PNK +   L++ +C+      A 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
                M+++ +  D+   + L +GL    K + A ++FR+M  +G+ P  F     IN
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 61/387 (15%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           +T++++++ L KN K   +E I R        ++  K     ++SY           +L 
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFR--------EMRGKGIAPDVFSY----------GVLI 634

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             ++     + A+  F +M + G  P +   N  L     S  ++ A     EM    + 
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----------- 309
           PN  T   ++  +CK G +  A  +F  M+  G +P    Y TL+ G C           
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 310 ---NK-----------GLLSLAMKFKNLMEKNGI-------------QPNVITFNTLIFG 342
              NK            L++   KF     K  +             +PN +T+N +I  
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A  +F +M+  N+ P V+TY +L+NGY ++G       +++E +  GI+ D
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA-----STYSALITGQCVRKNSERA 457
            + Y+ +I    KEG T KA  LV  +   + V +      ST  AL++G       E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            ++ ++M+R    P+      L++  C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 208/454 (45%), Gaps = 55/454 (12%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-FDLLFK 201
           + + +HIL + +    + S+LR  L    F   S +F S+L +   CD + L   DLL  
Sbjct: 111 YCMAVHILVQAQMPSQAMSVLRH-LALTGFSC-SAIFSSLLRTISRCDPTNLFSVDLLVN 168

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K  +A      M + GF   + SCN  L++L+   + +    F KE    +   
Sbjct: 169 AYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPL 228

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V T N+V+++ C  G + +A  + + M++   +P+  TYNT+++ +  KG    A++  
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKMKNCR-LPNAVTYNTILNWYVKKGRCKSALRIL 287

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + MEKNGI+ ++ T+N +I   CK  +   A  +   M+  N++P+  +YNTLI+G+   
Sbjct: 288 DDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGE 347

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT--------------------KK 421
           G   +   ++ +MLR  +K  + TY ALI G C+ G+T                     K
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 422 AAYLVKDLDKNSLVPNASTYSALIT-------------------------------GQCV 450
           A  ++K +  + + P+  TYSALI                                  C 
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQ 467

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           R N   AF +Y +M+R G  P+   +  L+   CQ     +A E ++ +LEK  A D   
Sbjct: 468 RGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT 527

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L+ L  G+   G  + A+ L  KM  R +LP  +
Sbjct: 528 LNTLLVGICKHGTLDEALDLCEKMVTRNILPDTY 561



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 155/315 (49%), Gaps = 3/315 (0%)

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S+L++   +  A  F + M R +IS +V + N ++ ++C+ G +  A  V+ NM   G+ 
Sbjct: 428 SALINEGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWP 487

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P + TY +L+ G C  G L  A +F   + +     +  T NTL+ G CK G L EA  +
Sbjct: 488 PDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDL 547

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             +M   N+ P+  TY  L++G+ + G       L + ML  G+  D + Y  L+ GL  
Sbjct: 548 CEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVN 607

Query: 416 EGKTKKAAYLVKDLD-KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           EG+ K A+Y+ +++  K  L  +   Y++++ G           +L ++M  +   P+  
Sbjct: 608 EGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSA 667

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +LM  + +     R   +  +M+++ + PD++    L  GL   G  E+A+K   KM
Sbjct: 668 SYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKM 727

Query: 535 EIRGLLPK--GFDKL 547
            + G+ P    FD L
Sbjct: 728 VLEGVFPDNLAFDIL 742



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 6/313 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++  L   +++      + M  N + P+  + N++MH + K G + R + ++++M  
Sbjct: 635 NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 694

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P   TY  LI G C  GL+ +A+KF   M   G+ P+ + F+ LI  F +K K+  
Sbjct: 695 EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 754

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++FS MK  ++SP+  TY  ++NG  +    +    +  +M+ +G++     Y ALI 
Sbjct: 755 ALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALIN 814

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             C+ G    A  L +D+    +VP+    S+++ G C     E A  ++ S++R+G  P
Sbjct: 815 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 874

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDEL--AM 528
               F  LM   C+    D A   L +++E C +  D +  + L +GL  C K  +  A+
Sbjct: 875 TIATFTTLMHGLCKEFKIDDAFH-LKQLMESCGLKVDVVTYNVLITGL--CNKKCICDAL 931

Query: 529 KLFRKMEIRGLLP 541
            L+ +M+ +GLLP
Sbjct: 932 DLYEEMKSKGLLP 944



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 160/364 (43%), Gaps = 1/364 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ +  +Y  R     A   +  M  +G+ P I +    L  L     +  A  F   + 
Sbjct: 458 FNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLL 517

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +  TLN ++   CK G ++ A+++ + M +   +P   TY  L+ G C +G + 
Sbjct: 518 EKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVV 577

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSPNVVTYNTL 374
            A+    +M + G+ P+ I +  L+ G   +G++  A+ +F E+     +  + + YN++
Sbjct: 578 PALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSM 637

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +NGY + G       L   M  N +     +YN L+ G  K+G+  +  YL +D+ K  +
Sbjct: 638 MNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGI 697

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TY  LI G C     E A +  + M+  G  P+   F++L+  F +      A +
Sbjct: 698 KPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQ 757

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
           +   M    M+P S     + +GL      + + ++   M   GL PK    +  IN   
Sbjct: 758 LFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKC 817

Query: 555 ENGE 558
             G+
Sbjct: 818 RVGD 821



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 1/229 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  +  M+   +SP+  T   +++   +   ++++ E+  +M   G  P  T Y  LI+
Sbjct: 755 ALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALIN 814

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C  G +  A + K  M+  G+ P+ +  ++++ G CK GK+ EA  +FS +    + P
Sbjct: 815 AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 874

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + T+ TL++G  +    +    L + M   G+KVD++TYN LI GLC +     A  L 
Sbjct: 875 TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLY 934

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN-KH 474
           +++    L+PN +TY  L          +   +L K +   G  P+ KH
Sbjct: 935 EEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKH 983



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 136/330 (41%), Gaps = 52/330 (15%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISP-NVYTLNMVMHAFCKLGIIERAVEVFKN 288
           SC+   SSLL +               +R  P N+++++++++A+ K G +  A      
Sbjct: 140 SCSAIFSSLLRT--------------ISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFF 185

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+  GF  S+ + N +++             F           +V T N ++   C +GK
Sbjct: 186 MDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGK 245

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L +A  +  +MK   + PN VTYNT++N Y                              
Sbjct: 246 LSKAESMLQKMKNCRL-PNAVTYNTILNWY------------------------------ 274

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
                 K+G+ K A  ++ D++KN +  +  TY+ +I   C  K S RA+ L K M    
Sbjct: 275 -----VKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN 329

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P++  +  L+  F      + A  +  +ML + + P     + L  G    G+ + A 
Sbjct: 330 LTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEAR 389

Query: 529 KLFRKMEIRGLLPKGFDKLRTI-NCAPENG 557
           ++  +M+I G+ P+   K + I  C   +G
Sbjct: 390 RVLYEMQITGVRPREVSKAKQILKCMLADG 419



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G +P   + +  +  L    +V+ A+  +  + R  + P + T   +MH  CK   
Sbjct: 832 MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 891

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I+ A  + + MES G    V TYN LI+G CNK  +  A+     M+  G+ PN+ T+ T
Sbjct: 892 IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 951

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           L       G + +  ++  +++   + P+
Sbjct: 952 LTGAMYATGTMQDGEKLLKDIEDRGIVPS 980



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 55/125 (44%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A   F  +   G +P I +    +  L    ++D A    + M    +  +V T N
Sbjct: 856 KVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYN 915

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++   C    I  A+++++ M+S G +P++TTY TL       G +    K    +E  
Sbjct: 916 VLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 975

Query: 328 GIQPN 332
           GI P+
Sbjct: 976 GIVPS 980


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 203/475 (42%), Gaps = 61/475 (12%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLE--THSIVLHILTKNRKFKSSESILRGI 166
           V H ++    D  L+L+FF W  T +P S +L+   HS +L +L   R F   E +L  +
Sbjct: 59  VAHFVIDRVHDAELALKFFDWAST-RPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENM 117

Query: 167 LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFL 225
                               +    +   F  L   Y        A   F  +R+ +  L
Sbjct: 118 ------------------KAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCL 159

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV----YTLNMVMHAFCKLGIIER 281
           P + + N  L+ L+ S +VD+AL  Y +M +           YT ++V+   C LG IE 
Sbjct: 160 PTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEE 219

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
              + K+    G +P V  YN +I G+C KG L  A +    ++  G+ P V T+  LI 
Sbjct: 220 GRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALIN 279

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFCK G+    +++ +EM A  ++ NV  +N +I+   + G     A     M   G   
Sbjct: 280 GFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGP 339

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA----------------------- 438
           DI TYN +I   CK G+ K+A   ++   +  L+PN                        
Sbjct: 340 DITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGML 399

Query: 439 ------------STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
                        +Y A I G  V    + A  + + M+  G  P+  I+ +LMS  C+N
Sbjct: 400 FRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKN 459

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             F     +L EML++ + PD  + + L  G    G+ + A+K+F+ +  +G+ P
Sbjct: 460 GRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDP 514



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 190/403 (47%), Gaps = 18/403 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           T+ET+  +++   K  +F++ + +L   + +   ++  K+F++++             D 
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTE-MAARGLNMNVKVFNNVI-------------DA 315

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
            FK Y    K   A +T  +M + G  P I + N  ++      R+  A  F ++ +   
Sbjct: 316 EFK-YGLVTK---AAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERG 371

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN ++   +MHA+CK G   +A  +   +  +G  P + +Y   I G    G + +A+
Sbjct: 372 LLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVAL 431

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
             +  M + G+ P+   +N L+ G CK G+      + SEM   NV P+V  + TL++G+
Sbjct: 432 MVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGF 491

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +    +++ ++R G+   I+ YNA+I G CK GK   A   +  +      P+ 
Sbjct: 492 IRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDE 551

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS +I G   + +   A +++  M++   +PN   +  L++ FC+  D  RA +V   
Sbjct: 552 YTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRG 611

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M    + P+ +  + L  G    GK E A  +F  M + G  P
Sbjct: 612 MKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPP 654



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/346 (24%), Positives = 158/346 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++++   Y  +   + AT T  +++  G LP +E+    ++    +   +   
Sbjct: 232 CVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVD 291

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    ++ NV   N V+ A  K G++ +A E  + M  MG  P +TTYNT+I+  
Sbjct: 292 QLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFS 351

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A +F    ++ G+ PN  ++  L+  +CK+G   +A  +   +      P++
Sbjct: 352 CKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDL 411

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+Y   I+G    G  ++   + E+M+  G+  D   YN L+ GLCK G+      L+ +
Sbjct: 412 VSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSE 471

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +   ++ P+   ++ L+ G       + A +++K +IR G  P    +  ++  FC+   
Sbjct: 472 MLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGK 531

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              A   L +M     APD    S +  G         A+K+F +M
Sbjct: 532 MTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQM 577



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 140/283 (49%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  +  +  A     ++ + G  P + S   F+  ++    +D+AL   ++M    
Sbjct: 382 LMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKG 441

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+    N++M   CK G       +   M      P V  + TL+ G    G L  A+
Sbjct: 442 VFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAI 501

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K   ++ + G+ P ++ +N +I GFCK GK+ +A    ++MK  + +P+  TY+T+I+GY
Sbjct: 502 KIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGY 561

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  +      ++ +M+++  K +++TY +LI G CK+    +A  + + +    LVPN 
Sbjct: 562 VKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNV 621

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
            TY+ L+ G       E+A  +++ M+ +GC PN   F  L++
Sbjct: 622 VTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLIN 664



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 153/331 (46%), Gaps = 25/331 (7%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++++L        +F        +M D    P +      +   + +  +D A+  +K +
Sbjct: 448 IYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVI 507

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R  + P +   N ++  FCK G +  A+     M+++   P   TY+T+I G+  +  +
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S A+K    M K+  +PNVIT+ +LI GFCKK  +  A ++F  MK+ ++ PNVVTY TL
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTL 627

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           + G+ + G  E   S++E ML NG   +  T++ LI GL                     
Sbjct: 628 VGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL--------------------- 666

Query: 435 VPNASTYSALITGQCVRKNSERAFQL--YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             N +T   LI  +   +N ER+  L  +  M+  G       +  ++   C++   D A
Sbjct: 667 -TNTATSPVLIEEKDSMEN-ERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTA 724

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
             +L +ML K    DS+  + +  GL H GK
Sbjct: 725 QLLLTKMLTKGFLIDSVCFTAMLHGLCHKGK 755



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 73/297 (24%), Positives = 133/297 (44%), Gaps = 18/297 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G + +   D   K+F  I+   +  D   + ++ + K +    K  +A     +M+
Sbjct: 486 TLMDGFIRNGELDEAIKIFKVIIR--KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +    P   + +  +   +    +  AL  + +M +++  PNV T   +++ FCK   + 
Sbjct: 544 NVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMI 603

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA +VF+ M+S   +P+V TY TL+ G    G    A     LM  NG  PN  TF+ LI
Sbjct: 604 RAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLI 663

Query: 341 FGFCKKGK----LHEANRI----------FSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G          + E + +          F+ M +      +  YN++I    + G  + 
Sbjct: 664 NGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDT 723

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK-DLDKNSLVPNASTYS 442
              L  +ML  G  +D + + A++ GLC +GK+K+   ++  DL+K  L   A  YS
Sbjct: 724 AQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIEL-QTAVKYS 779


>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g74900, mitochondrial; AltName: Full=Protein
           ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
           Precursor
 gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
 gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
          Length = 482

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 173/344 (50%), Gaps = 4/344 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  F ++ + YA   K   A   F  M ++G    + S N  L  L  S+RV+ A   +
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +R  R S +  T N++++ +C +    +A+EV K M   G  P++TTYNT++ G    
Sbjct: 185 RALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A +F   M+K   + +V+T+ T++ GF   G++  A  +F EM    V P+V TY
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I    +  N E    ++EEM+R G + ++ TYN LI GL   G+  +   L++ ++ 
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC---QNED 488
               PN  TY+ +I         E+A  L++ M    C PN   + +L+S      ++ED
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              A ++LLEM+E+   P     + + +GL   G    A ++ R
Sbjct: 424 MVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 157/310 (50%), Gaps = 4/310 (1%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D A+  +  M  +    ++ + N ++   CK   +E+A E+F+ +    F     TYN +
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           ++G C       A++    M + GI PN+ T+NT++ GF + G++  A   F EMK  + 
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             +VVTY T+++G+G  G  +   ++++EM+R G+   + TYNA+I  LCK+   + A  
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + +++ +    PN +TY+ LI G        R  +L + M   GC PN   + M++  + 
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAMKLFRKMEIRGLLP 541
           +  + ++A  +  +M      P+    + L SG+    + E   +A KL  +M  RG +P
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIP 441

Query: 542 KGFDKLRTIN 551
           + F   R +N
Sbjct: 442 RKFTFNRVLN 451



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 3/289 (1%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR  RI P+  T  +V   +   G  ++AV++F NM   G    + ++NT++   C    
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +  A + F+ L  +  +  + +T+N ++ G+C   +  +A  +  EM    ++PN+ TYN
Sbjct: 177 VEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T++ G+ + G        + EM +   ++D++TY  ++ G    G+ K+A  +  ++ + 
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            ++P+ +TY+A+I   C + N E A  +++ M+R G  PN   + +L+       +F R 
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            E++  M  +   P+    + +      C + E A+ LF KM     LP
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 7/213 (3%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+   + +  +   +    + + A + F +M   G LP + + N  +  L   + V+ 
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EM R    PNV T N+++      G   R  E+ + ME+ G  P+  TYN +I 
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE---ANRIFSEMKATN 363
            +     +  A+     M      PN+ T+N LI G   + +  +   A ++  EM    
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             P   T+N ++NG    GN     +  +E+LR
Sbjct: 439 FIPRKFTFNRVLNGLLLTGNQ----AFAKEILR 467


>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
          Length = 714

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 200/410 (48%), Gaps = 36/410 (8%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           L+K + D   +LE F  V   +  S    T++ +LH L K++KF++ +++L  +      
Sbjct: 136 LIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQM------ 189

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM----RDYGFLPII 228
                       +Y  C     +F  L K ++         + F  +    R+   L  I
Sbjct: 190 ------------TYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAI 237

Query: 229 ESCNKFLSSLLDSER---------VDIALGFYKEMRRNRIS-PNVYTLNMVMHAFCKLGI 278
            +C   L+ L++S +         +D A    +EM+++ +S PN+ T + +++  C  G 
Sbjct: 238 STC---LNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGR 294

Query: 279 IERAVEVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++ A+E+F+ M S    +P   TYN LI+G C+   +  A+K    M+KNG  PNV  ++
Sbjct: 295 LKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFNYS 354

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ GFCK+G+L EA  +F EMK+  + P+ V Y TLIN + + G  +    L ++M  N
Sbjct: 355 ALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXEN 414

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             + D +T+N ++ GLC+EG+ ++A  +++ L    +  N ++Y  ++   C     ++A
Sbjct: 415 KCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKA 474

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            QL   M+  G  P+      L+   C+      A   LL +LE    P+
Sbjct: 475 TQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPE 524



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 106/452 (23%), Positives = 202/452 (44%), Gaps = 25/452 (5%)

Query: 30  PFRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNP---IPIPHRTLPEPKGQDLDFVNIAY 86
           P    +T +    K P F++   + N +K   +P   + I +R + E +G      N  Y
Sbjct: 110 PATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNR-VAEQRG--FSHNNATY 166

Query: 87  SHLIH--SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSL-EFFTWVQTHKPSSLTLETH 143
           + ++H  +  KK  A+   L   ++ +   K  +   L+L + F+ +  H+     +E  
Sbjct: 167 ATILHKLAKSKKFQAIDAVL--HQMTYETCKFHEGIFLNLMKHFSKLSLHER---VVEMF 221

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSK------LFDSILYSYRMCDSSP--LV 195
             +  I+ +    K+  + L  +++S+   + +K       F+ +    +   S P  + 
Sbjct: 222 DAIXPIVREKPSLKAISTCLNLLVESNQSSITAKNGDIDSAFEVVEEMKKSHVSYPNLIT 281

Query: 196 FDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  L        + + A + F +M  +D   LP   + N  ++      +VD AL   + 
Sbjct: 282 YSTLINGLCGSGRLKEAIELFEEMVSKDQ-ILPDALTYNALINGFCHGXKVDRALKIMEF 340

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M++N  +PNV+  + +M+ FCK G +E A EVF  M+S+G  P    Y TLI+  C  G 
Sbjct: 341 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 400

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  AM+    M +N  + + +TFN ++ G C++G+  EA  +   +    V  N  +Y  
Sbjct: 401 VDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRI 460

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           ++N   + G  +    L   ML  G+     T N L++ LC+ GK   A   +  L +  
Sbjct: 461 VLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELG 520

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
             P  ++++ L+   C  +    AF+L   ++
Sbjct: 521 FKPEPNSWALLVELICRERKLLPAFELLDDLV 552


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/343 (31%), Positives = 170/343 (49%), Gaps = 25/343 (7%)

Query: 232 NKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N F SS   SE    A    +EM  R +ISP+V T N +++AF K G    A E++  M 
Sbjct: 263 NGFCSSGRWSE----AQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G IPS  TY+++I G C +  L  A     LM   G  P++ITFNTLI G+C+  ++ 
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +  ++  EM    +  N +TY TLI+G+ QVG+      L +EM+ +G+  +++T N L+
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438

Query: 411 LGLCKEGKTKKAAYLVKDLDK-----------NSLVPNASTYSALITGQCVRKNSERAFQ 459
            GLC  GK K A  + K + K           N + P+  TY+ LI+G         A +
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 498

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           LY+ M   G  P+   +  ++   C+    D A ++   M  K  +P+ +  + L +G  
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 558

Query: 520 HCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTINCA 553
             G+ +  ++LF +M  RG+         L  GF K+  IN A
Sbjct: 559 KAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGA 601



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 171/347 (49%), Gaps = 11/347 (3%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   GF P + + +  L  L   +R+  AL  + +M 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    PNV T   +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 176 K----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231

Query: 316 LAMKFKNLMEK-NGIQPNVITF-----NTLIFGFCKKGKLHEANRIFSEM-KATNVSPNV 368
            A+     ME+ + I+PNV+ +       +I GFC  G+  EA ++  EM +   +SP+V
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN LIN + + G       LY+EML  GI    +TY+++I G CK+ +   A ++   
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +      P+  T++ LI G C  K  +   +L   M  +G   N   +  L+  FCQ  D
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            + A ++L EM+   + P+ +  + L  GL   GK + A+++F+ M+
Sbjct: 412 LNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 175/378 (46%), Gaps = 18/378 (4%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++ G   S  +    +L   +L   ++   SP  + ++ L   +    KF  A + + +M
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKI---SPDVVTYNALINAFVKEGKFFEAEELYDEM 317

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G +P   + +  +       R+D A   +  M     SP++ T N ++  +C+   +
Sbjct: 318 LPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRV 377

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +  +++   M   G + +  TY TLI G C  G L+ A      M  +G+ PNV+T NTL
Sbjct: 378 DDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTL 437

Query: 340 IFGFCKKGKLHEANRIFSEMKAT-----------NVSPNVVTYNTLINGYGQVGNSEMGA 388
           + G C  GKL +A  +F  M+ +            V P+V TYN LI+G    G      
Sbjct: 438 LDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAE 497

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            LYEEM   GI  D +TYN++I GLCK+ +  +A  +   +   S  PN  T++ LI G 
Sbjct: 498 ELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGY 557

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
           C     +   +L+  M R G   N   +  L+  F +  + + A ++  EM+   + PD+
Sbjct: 558 CKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDT 617

Query: 509 IILSELYSGLHHCGKDEL 526
           I +  + +GL    K+EL
Sbjct: 618 ITIRNMLTGLW--SKEEL 633



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 164/327 (50%), Gaps = 11/327 (3%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +++ +   +   A   Y EM    I P+  T + ++  FCK   ++ A  +
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M + G  P + T+NTLI+G+C    +   +K  + M + G+  N IT+ TLI GFC+
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR--------- 396
            G L+ A  +  EM ++ V PNVVT NTL++G    G  +    +++ M +         
Sbjct: 409 VGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASH 468

Query: 397 --NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             NG++ D+ TYN LI GL  EGK  +A  L +++    +VP+  TY+++I G C +   
Sbjct: 469 PFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRL 528

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A Q++ SM      PN   F  L++ +C+    D   E+  EM  + +  ++I    L
Sbjct: 529 DEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITL 588

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
             G    G    A+ +F++M   G+ P
Sbjct: 589 IHGFRKVGNINGALDIFQEMMASGVYP 615



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 173/378 (45%), Gaps = 48/378 (12%)

Query: 207 KKFRNATDTFCQMRDYGFLP-IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
           K   +A D F  M     LP +I+ C K +  ++   R+D+ +  +++M   R+  N Y+
Sbjct: 57  KGLEDAIDLFGDMVRSRPLPSVIDFC-KLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
             ++M  FC    +  A+  F  +  +GF P+V T++TL+ G C +  +S A+   + M 
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT------------ 373
           K    PNV+TF TL+ G C++G++ EA  +   M    + PN +TY T            
Sbjct: 176 K----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231

Query: 374 -----------------------------LINGYGQVGNSEMGASLYEEML-RNGIKVDI 403
                                        +ING+   G       L +EML R  I  D+
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TYNALI    KEGK  +A  L  ++    ++P+  TYS++I G C +   + A  ++  
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M   GC P+   F  L++ +C+ +  D   ++L EM E  +  ++I  + L  G    G 
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411

Query: 524 DELAMKLFRKMEIRGLLP 541
              A  L ++M   G+ P
Sbjct: 412 LNAAQDLLQEMVSSGVCP 429



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 172/382 (45%), Gaps = 20/382 (5%)

Query: 129 WVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
           W +  +     LE   I   ++T N       +++   +    F    +L+D +L   R 
Sbjct: 271 WSEAQQLLQEMLERKKISPDVVTYN-------ALINAFVKEGKFFEAEELYDEMLP--RG 321

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
              S + +  +   +  + +   A   F  M   G  P I + N  ++    ++RVD  +
Sbjct: 322 IIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGI 381

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    +  N  T   ++H FC++G +  A ++ + M S G  P+V T NTL+ G 
Sbjct: 382 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGL 441

Query: 309 CNKGLLSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           C+ G L  A++    M+K           NG++P+V T+N LI G   +GK  EA  ++ 
Sbjct: 442 CDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYE 501

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    + P+ +TYN++I+G  +    +    +++ M       +++T+  LI G CK G
Sbjct: 502 EMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAG 561

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +      L  ++ +  +V NA TY  LI G     N   A  +++ M+ SG  P+     
Sbjct: 562 RVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIR 621

Query: 478 MLMSTFCQNEDFDRAAEVLLEM 499
            +++     E+  RA  +L ++
Sbjct: 622 NMLTGLWSKEELKRAVAMLEDL 643



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 9/211 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS-------PLV--FDLLFKTYAHRKKFRN 211
           ++L G+ D+       ++F ++  S    D+S       P V  +++L     +  KF  
Sbjct: 436 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + + +M   G +P   + N  +  L    R+D A   +  M     SPNV T   +++
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK G ++  +E+F  M   G + +  TY TLI G    G ++ A+     M  +G+ P
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYP 615

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           + IT   ++ G   K +L  A  +  +++ +
Sbjct: 616 DTITIRNMLTGLWSKEELKRAVAMLEDLQMS 646


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 157/300 (52%), Gaps = 9/300 (3%)

Query: 249 GFYKE-----MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           GF+KE     M   RISPNV T N ++ A CK   +++A+EV   M   G +P   TYN+
Sbjct: 97  GFFKEGDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNS 156

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++ G C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA +IF  M    
Sbjct: 157 IVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG 216

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P++ TY TL+ GY   G       L + M+RNGI  +   ++ L+    K+ K ++A 
Sbjct: 217 LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAM 276

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + +  L PNA TY  +I   C     E A   ++ MI  G RP+  ++  L+ + 
Sbjct: 277 LVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSL 336

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           C  + +++A E+ LEML++ +   +I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 337 CIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS--HCKEGRVIESGKLFDLMVRIGVKP 394



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 133/261 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+ F K+MR + + P+V T N +M 
Sbjct: 135 AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 194

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 195 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 254

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ L+  + K+ K+ EA  +FS+M+   ++PN VTY T+I+   + G  E     +
Sbjct: 255 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 314

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G++ D + YN+LI  LC   K +KA  L  ++    +  +   ++++I   C  
Sbjct: 315 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 374

Query: 452 KNSERAFQLYKSMIRSGCRPN 472
                + +L+  M+R G +P+
Sbjct: 375 GRVIESGKLFDLMVRIGVKPD 395



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 77/295 (26%), Positives = 143/295 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D    P + + N  +++L  ++ VD A+     M ++ + P+  T N ++H FC  G
Sbjct: 106 KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSG 165

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A+   K M S G  P V TYN+L+   C  G  + A K  + M K G++P++ T+ 
Sbjct: 166 QPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYG 225

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ G+  KG L E + +   M    + PN   ++ L+  Y +    E    ++ +M + 
Sbjct: 226 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQ 285

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  + +TY  +I  LCK G+ + A    + +    L P++  Y++LI   C+    E+A
Sbjct: 286 GLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKA 345

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            +L+  M+  G   +   F  ++ + C+      + ++   M+   + PD I L 
Sbjct: 346 EELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 140/299 (46%), Gaps = 45/299 (15%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFN 337
           E A  VF  +   G IP V +YN L++G C++     A++  ++M  +G    P+V++++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI---------------------- 375
           T+I GF K+G L        +M    +SPNVVTYN++I                      
Sbjct: 93  TVINGFFKEGDL-------DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 376 -------------NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
                        +G+   G  +      ++M  +G++ D++TYN+L+  LCK G+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   + K  L P+ +TY  L+ G   +        L   M+R+G  PN ++F +L+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + E  + A  V  +M ++ + P+++    +   L   G+ E AM  F +M   GL P
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 150/333 (45%), Gaps = 29/333 (8%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA ++K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 258 VFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQM 317

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+    N ++H+ C     E+A E+F  M   G   S   +N++I  HC +G +
Sbjct: 318 IDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRV 377

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR--IFSEMK------------ 360
             + K  +LM + G++P++IT    + G  ++      N   IF+ M             
Sbjct: 378 IESGKLFDLMVRIGVKPDIITLGRFL-GSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436

Query: 361 ------ATNVS--PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
                 A+N S  P + TYN +++G  +   ++    +++ +    +K++  T+N +I  
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKSMIRSGC 469
           L K G+  +A  L      N LVPN  TY  +   I GQ +    E   QL+ SM  +GC
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLSMEDNGC 553

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             +  +   ++    Q  +  RA   L  + EK
Sbjct: 554 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 586



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 142/348 (40%), Gaps = 21/348 (6%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M   G  P I +    L        +    G    M RN I PN Y  ++++ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A+ K   +E A+ VF  M   G  P+  TY T+I   C  G +  AM +   M   G++P
Sbjct: 265 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRP 324

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + I +N+LI   C   K  +A  +F EM    +  + + +N++I+ + + G       L+
Sbjct: 325 DSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLF 384

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV-------KDLDKNSLV--------- 435
           + M+R G+K DI+T    +    ++       Y +        D +K + V         
Sbjct: 385 DLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTAS 444

Query: 436 -----PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
                P   TY+ ++ G C  K ++ A ++++++     +     F +++    +    D
Sbjct: 445 NSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRND 504

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A ++ +      + P+      +   +   G  E   +LF  ME  G
Sbjct: 505 EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 552



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 129/326 (39%), Gaps = 40/326 (12%)

Query: 176 SKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++LY  +M D       +V++ L  +     K+  A + F +M D G  L  I  
Sbjct: 305 GRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTI-- 362

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVM-HAFCKLGIIERAVEV 285
              F +S++DS     RV  +   +  M R  + P++ TL   +  A     +      +
Sbjct: 363 ---FFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFI 419

Query: 286 FKNMESMG--------------------FIPSVTTYNTLISGHCNKGLLSLAMK-FKNLM 324
           F NM + G                      P + TYN ++ G C   L   A++ F+NL 
Sbjct: 420 FTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLC 479

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
             + ++    TFN +I    K G+  EA  +F    +  + PN  TY  +       G  
Sbjct: 480 LMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 538

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E    L+  M  NG  VD    N ++  L + G+  +A   +  +D+      AST S  
Sbjct: 539 EELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLF 598

Query: 445 ITGQCVRKNSERAFQL---YKSMIRS 467
           I      K  E    L   YKS I S
Sbjct: 599 IDLLSGGKYQEYHIFLPEKYKSFIES 624


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 207/457 (45%), Gaps = 41/457 (8%)

Query: 124 LEFFTWVQTH-KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           L FF W QTH   +SL+      +L  L  + KF  ++S+L   + +D           +
Sbjct: 71  LSFFKWSQTHLSVTSLSPLPLISLLSPLLSHHKFSDAKSLLTAFISADR--THLLHHHLL 128

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD-- 240
              ++   S  ++ D     Y    +  +A   F +M+     P + +CN  +++L+   
Sbjct: 129 HSPFKKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYP 188

Query: 241 ------------------------------------SERVDIALGFYKEMRRNRISPNVY 264
                                                 ++  A+G   +M+     P+  
Sbjct: 189 SKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNV 248

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           + N ++   CK G +  A ++  +M++ G +P+  T+N L+SG+C  G L  A +  +LM
Sbjct: 249 SYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLM 308

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            +N + P+V T+N LI G CK GK+ EA R+  EM+   + P+VVTYNTLING     +S
Sbjct: 309 AQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSS 368

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
             G  L ++M   G+K + +TYN ++    KEGK   A   ++ ++++   P+  T++ L
Sbjct: 369 LKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C       AF++   M R G + N      ++ T C     D A ++L    ++  
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGY 488

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D +    L  G    GK   AMKL+ +M+ + ++P
Sbjct: 489 FVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIP 525



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 163/327 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M +   LP + + N  ++   D            +M    + PN  T N+V+  + K G
Sbjct: 342 EMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEG 401

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A    + ME  GF P   T+NTLI+G+C  G LS A +  + M + G++ N +T N
Sbjct: 402 KMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLN 461

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T++   C + KL +A ++ S         + V+Y TLI GY + G S     L++EM   
Sbjct: 462 TILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEK 521

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I   I+TYN +I GLC  GKT ++   + +L ++ LVP+ +TY+ +I G C     E+A
Sbjct: 522 EIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKA 581

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           FQ +  M++   +P+     +L+   C     D+A ++    + K  A D++  + + SG
Sbjct: 582 FQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISG 641

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L    + E A  L  +ME + L P  +
Sbjct: 642 LCKEDRFEEAFDLLAEMEEKKLGPDCY 668



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 170/365 (46%), Gaps = 18/365 (4%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +      + K   A D    M++ G LP   + N  +S           L
Sbjct: 243 CFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGY-------CKL 295

Query: 249 GFYKE-------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           G+ KE       M +N + P+V+T NM++   CK G I+ A  +   ME++  +P V TY
Sbjct: 296 GWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTY 355

Query: 302 NTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           NTLI+G   C+  L    +  K  ME  G++PN +T+N ++  + K+GK+  A     +M
Sbjct: 356 NTLINGCFDCSSSLKGFELIDK--MEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           + +  SP+ VT+NTLINGY + G       + +EM R G+K++ +T N ++  LC E K 
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  L+    K     +  +Y  LI G      S  A +L+  M      P+   +  +
Sbjct: 474 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTM 533

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C +   D++ + L E+LE  + PD    + +  G    G+ E A +   KM  +  
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSF 593

Query: 540 LPKGF 544
            P  F
Sbjct: 594 KPDLF 598



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 147/319 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + ++++ K Y    K  NA +   +M + GF P   + N  ++    + R+  A    
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM R  +  N  TLN ++H  C    ++ A ++  +    G+     +Y TLI G+   
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    AMK  + M++  I P++IT+NT+I G C  GK  ++    +E+  + + P+  TY
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT+I GY + G  E     + +M++   K D+ T N L+ GLC EG   KA  L      
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWIS 625

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
                +A TY+ +I+G C     E AF L   M      P+ + +  ++S          
Sbjct: 626 KGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKE 685

Query: 492 AAEVLLEMLEKCMAPDSII 510
           A E +  ++E+    D  I
Sbjct: 686 AEEFMSRIVEQGKLQDQTI 704



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 170/389 (43%), Gaps = 47/389 (12%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY------- 186
           KP+++T   +++V+    K  K  ++ + LR + +S  F      F++++  Y       
Sbjct: 384 KPNAVT---YNVVVKWYVKEGKMDNAGNELRKMEES-GFSPDCVTFNTLINGYCKAGRLS 439

Query: 187 ---RMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG-FLPIIESCNKF 234
              RM D         + +  + +  T    +K  +A          G F+  +      
Sbjct: 440 EAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLI 499

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +    D + V+ A+  + EM+   I P++ T N ++   C  G  +++++    +   G 
Sbjct: 500 MGYFKDGKSVE-AMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P  TTYNT+I G+C +G +  A +F N M K   +P++ T N L+ G C +G L +A +
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F+   +   + + VTYNT+I+G  +    E    L  EM    +  D  TYNA++  L 
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 415 KEGKTKKAA-YLVKDLDKNSLV----------------------PNASTYSALITGQCVR 451
             G+ K+A  ++ + +++  L                       PN+ T+S  I   C +
Sbjct: 679 DAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQ 738

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
              + A  + +   + G   +K  +  LM
Sbjct: 739 GKYKDAMHMVQESTQKGITLHKSTYISLM 767



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 144/344 (41%), Gaps = 44/344 (12%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           K +S+TL T   +LH L   RK   +  +L        F       D + Y         
Sbjct: 454 KMNSVTLNT---ILHTLCGERKLDDAYKLLSSASKRGYF------VDEVSYG-------- 496

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
                L   Y    K   A   + +M++   +P I + N  +  L  S + D ++    E
Sbjct: 497 ----TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNE 552

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + + P+  T N ++  +C+ G +E+A +    M    F P + T N L+ G C +G+
Sbjct: 553 LLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGM 612

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+K  N     G   + +T+NT+I G CK+ +  EA  + +EM+   + P+  TYN 
Sbjct: 613 LDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNA 672

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDI-----------------------LTYNALI 410
           +++     G  +        ++  G   D                        +T++  I
Sbjct: 673 ILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQI 732

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             LC +GK K A ++V++  +  +  + STY +L+ G   R+ S
Sbjct: 733 NELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKS 776



 Score = 95.5 bits (236), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 38/285 (13%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISG---HCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           A ++F  M+ +   P++ T NTLI+    + +K  + L+    + + K G++ N  TFN 
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI+G C + KL EA  +  +MK  +  P+ V+YNT++                       
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTIL----------------------- 254

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              D+L         CK+GK  +A  L+ D+  N L+PN +T++ L++G C     + A 
Sbjct: 255 ---DVL---------CKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAA 302

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Q+   M ++   P+   + ML+   C++   D A  +  EM    + PD +  + L +G 
Sbjct: 303 QVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGC 362

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             C       +L  KME +G+ P        +    + G+ ++ G
Sbjct: 363 FDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAG 407


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 180/371 (48%), Gaps = 6/371 (1%)

Query: 177 KLFDSILYSYRMCDSSPL----VFDLLFKTYAHRKKFRNATDT--FCQMRDYGFLPIIES 230
           KL D+I     M  S PL     F+ L    A  KKF          +M   G+ P I +
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            +  L+     +R+  A+    +M      P+  T   ++H          AV +   M 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P++ TY  +++G C +G + LA    N ME   I+ +V+ FNT+I   CK   + 
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A  +F EM+   + PNVVTY++LI+     G     + L  +M+   I  +++T+NALI
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
               KEGK  +A  L  D+ K S+ P+  TY++LI G C+    ++A Q+++ M+   C 
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   +  L+  FC+++  +   E+  EM  + +  D++  + L  GL H G  + A K+
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 531 FRKMEIRGLLP 541
           F++M   G+ P
Sbjct: 382 FKQMVSDGVPP 392



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 163/337 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+  +A     QM + G+ P   +    +  L    +   A+     M +  
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 144

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN+ T  +V++  CK G I+ A  +   ME+      V  +NT+I   C    +  A+
Sbjct: 145 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 204

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ME  GI+PNV+T+++LI   C  G+  +A+++ S+M    ++PN+VT+N LI+ +
Sbjct: 205 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 264

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       L+++M++  I  DI TYN+LI G C   +  KA  + + +      P+ 
Sbjct: 265 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 324

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  E   +L++ M   G   +   +  L+     + D D A +V  +
Sbjct: 325 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 384

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           M+   + PD +  S L  GL + GK E A+++F  M+
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 421



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 181/380 (47%), Gaps = 14/380 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +  R+ D+  LV  ++          F T  H      K   A     +M  
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L     +D+A     +M   +I  +V   N ++ + CK   ++ 
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +FK ME+ G  P+V TY++LIS  C+ G  S A +  + M +  I PN++TFN LI 
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GK  EA ++  +M   ++ P++ TYN+LING+      +    ++E M+      
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 322

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ TYN LI G CK  + +    L +++    LV +  TY+ LI G     + + A +++
Sbjct: 323 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 382

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+  G  P+   + +L+   C N   ++A EV   M +  +  D  I + +  G+   
Sbjct: 383 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 442

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +    LF  + ++G+ P
Sbjct: 443 GKVDDGWDLFCSLSLKGVKP 462



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 163/345 (47%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++F+ +  +    +   +A + F +M   G  P + + +  +S L    R   A  
Sbjct: 181 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 240

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PN+ T N ++ AF K G    A ++  +M      P + TYN+LI+G C
Sbjct: 241 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 300

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +    M      P++ T+NTLI GFCK  ++ +   +F EM    +  + V
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI G    G+ +    ++++M+ +G+  DI+TY+ L+ GLC  GK +KA  +   +
Sbjct: 361 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ +  +   Y+ +I G C     +  + L+ S+   G +PN   +  ++S  C     
Sbjct: 421 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 480

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             A  +L +M E    PDS   + L       G    + +L R+M
Sbjct: 481 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D ++   R  D     ++ L   +    +   A   F  M      P +++ N  + 
Sbjct: 275 KLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 332

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               S+RV+     ++EM    +  +  T   ++      G  + A +VFK M S G  P
Sbjct: 333 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 392

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + TY+ L+ G CN G L  A++  + M+K+ I+ ++  + T+I G CK GK+ +   +F
Sbjct: 393 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 452

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             +    V PNVVTYNT+I+G       +   +L ++M  +G   D  TYN LI    ++
Sbjct: 453 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 512

Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
           G    +A L++++     V +AST
Sbjct: 513 GDKAASAELIREMRSCRFVGDAST 536



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 2/268 (0%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           ++ A+ +F  M     +PS+  +N L+S      K  L +++     M K G +P+++T 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           ++L+ G+C   ++ +A  +  +M      P+ +T+ TLI+G      +    +L + M++
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G + +++TY  ++ GLCK G    A  L+  ++   +  +   ++ +I   C  ++ + 
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L+K M   G RPN   +  L+S  C    +  A+++L +M+EK + P+ +  + L  
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                GK   A KL   M  R + P  F
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIF 290



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   S   +  ++LF  +  S+R      + +  L +   H     NA   F QM 
Sbjct: 329 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + +  L  L ++ +++ AL  +  M+++ I  ++Y    ++   CK G ++
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++F ++   G  P+V TYNT+ISG C+K LL  A      M+++G  P+  T+NTLI
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 506

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++     +  T   + N
Sbjct: 507 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 2/212 (0%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL--YEEMLRNGIKVDILT 405
           KL +A  +F  M  +   P++  +N L++   ++   ++  SL    +M++ G +  I+T
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            ++L+ G C   +   A  LV  + +    P+  T++ LI G  +   +  A  L   M+
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + GC+PN   + ++++  C+  D D A  +L +M    +  D +I + +   L      +
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 526 LAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            A+ LF++ME +G+ P        I+C    G
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYG 233


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 177/350 (50%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + + ++     + K+F  A   + ++ D G  P  ++C   +  L    RVD+A  
Sbjct: 151 DPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYE 210

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               + +  +  N    N ++  FC++G +++A+++   M   G +P + TYN L++  C
Sbjct: 211 LVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCC 270

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G++  A++    ME++G++P++ ++N L+ GFCK   +  A+ +  E   T    +VV
Sbjct: 271 EEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVV 330

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +YNT+I  + +   +  G  L+EEM   GI+ D++T+N LI    +EG T     L+ ++
Sbjct: 331 SYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEM 390

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K  ++P+   Y+A++   C     + A  +++ M+ +G  P+   +  L++ FC+    
Sbjct: 391 TKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRV 450

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             A  +  EM  K + PD +    +  GL    K  LA +++ +M  RG 
Sbjct: 451 MDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGF 500



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 162/324 (50%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   GF+P I + N +L+ L    R++ AL  +  M      P+V +  +++ A C   
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A +V++ +   G  P       L+ G C+ G + LA +    + K G++ N + +N
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI GFC+ G++ +A +I + M  T   P++VTYN L+N   + G  +    L E M R+
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G++ D+ +YN L+ G CK     +A  ++ +  +   + +  +Y+ +IT  C  + + + 
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKG 348

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           ++L++ M   G RP+   F +L+  F +        ++L EM +  + PD I  + +   
Sbjct: 349 YELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   GK ++A  +FR M   G+ P
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNP 432



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 165/334 (49%), Gaps = 5/334 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           +K+  +++ G+      DL  +L   ++      +S  LV++ L   +    +   A   
Sbjct: 189 YKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNS--LVYNALIDGFCRMGRVDKAMKI 246

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
              M   G +P + + N  L+   +   VD A+   + M R+ + P++Y+ N ++  FCK
Sbjct: 247 KAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCK 306

Query: 276 LGIIERA-VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
             +++RA + + + M++ G +  V +YNT+I+  C         +    M   GI+P+++
Sbjct: 307 ANMVDRAHLMMVERMQTKG-MCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMV 365

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN LI  F ++G  H   ++  EM    V P+ + Y  +++   + G  ++  S++ +M
Sbjct: 366 TFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDM 425

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + NG+  D+++YNAL+ G CK  +   A +L  ++    L P+  TY  ++ G    K  
Sbjct: 426 VENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKI 485

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             A +++  M+  G   N+H+ E L++   Q+ D
Sbjct: 486 SLACRVWDQMMERGFTLNRHLSETLVNAI-QSSD 518



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/320 (24%), Positives = 153/320 (47%), Gaps = 16/320 (5%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNV----YTLNMVMHAFCK------LGIIER 281
           N+F+  LL   R+ +A  +Y   RR+ I        +T +  + A C       L +I  
Sbjct: 49  NRFIGVLLRHSRLHLAHHYY---RRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIH- 104

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
              +  +M+S+GF+P +  +NT ++  C +  L  A++  + M   G  P+V+++  +I 
Sbjct: 105 --SLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIID 162

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C   +  EA +++  +    +SP+      L+ G    G  ++   L   +++ G+KV
Sbjct: 163 ALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKV 222

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + L YNALI G C+ G+  KA  +   + +   VP+  TY+ L+   C     + A +L 
Sbjct: 223 NSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLV 282

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           ++M RSG  P+ + +  L+  FC+    DRA  +++E ++     D +  + + +     
Sbjct: 283 ETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKA 342

Query: 522 GKDELAMKLFRKMEIRGLLP 541
            +     +LF +M  +G+ P
Sbjct: 343 RRTRKGYELFEEMCGKGIRP 362



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/302 (21%), Positives = 117/302 (38%), Gaps = 48/302 (15%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN------ 353
            Y + IS     GL++ A+   + M ++  +   + +N  I    +  +LH A+      
Sbjct: 12  AYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRH 71

Query: 354 ---RIFS------------------------------EMKATNVSPNVVTYNTLINGYGQ 380
              R FS                              +M +    P++  +NT +N   +
Sbjct: 72  VIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCR 131

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
               E    L+  M   G   D+++Y  +I  LC   +  +AA + + L    L P+   
Sbjct: 132 QNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKA 191

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
             AL+ G C     + A++L   +I+ G + N  ++  L+  FC+    D+A ++   M 
Sbjct: 192 CVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMS 251

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTIN 551
                PD +  + L +     G  + A++L   ME  G+ P         KGF K   ++
Sbjct: 252 RTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVD 311

Query: 552 CA 553
            A
Sbjct: 312 RA 313


>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 564

 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 203/433 (46%), Gaps = 21/433 (4%)

Query: 129 WVQT--HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
           W Q    K SSL    +  +++   +      +E+++R  ++ +  D P  ++ +++  Y
Sbjct: 5   WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE-MEEEGIDAPIDIYHTMMDGY 63

Query: 187 RM----------------CDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
            M                C  +P  + +  L   YA   K   A +   +M   G    +
Sbjct: 64  TMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNM 123

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           ++ +  ++  L  +    A   ++++ ++ I P+V   N ++ AFC +G ++RAV   K 
Sbjct: 124 KTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 183

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+     P+  T+  +I G   KG +  A+   ++M  +G  P V T+N LI G  +K K
Sbjct: 184 MQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRK 243

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A +I  EM    VSPN  TY T+++GY  +G++    + + ++   G+++D+ TY A
Sbjct: 244 MEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEA 303

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+   CK G+ + A  + K++   ++  N   Y+ LI G   R +   A  L + M R G
Sbjct: 304 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREG 363

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +P+ H +   ++   +  D  RA + + EM    + P+    + L +G       E A+
Sbjct: 364 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 423

Query: 529 KLFRKMEIRGLLP 541
             F +M++ GL P
Sbjct: 424 SCFEEMKLSGLKP 436



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 35/323 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +   K + NA   F  +   G  P +   N  +++     ++D A+   KEM+
Sbjct: 126 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 185

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R  P   T   ++H F + G +++A++VF  M   G IP+V TYN LI G   K  + 
Sbjct: 186 KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 245

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGF-------------------------------- 343
            A +  + M   G+ PN  T+ T++ G+                                
Sbjct: 246 KAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALL 305

Query: 344 ---CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G++  A  +  EM A N+  N   YN LI+G+ + G+    A L ++M R G++
Sbjct: 306 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQ 365

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI TY + I    K G  ++A   ++++    + PN  TY+ LI G       E+A   
Sbjct: 366 PDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSC 425

Query: 461 YKSMIRSGCRPNKHIFEMLMSTF 483
           ++ M  SG +P++ ++  LM++ 
Sbjct: 426 FEEMKLSGLKPDRAVYHCLMTSL 448



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/370 (24%), Positives = 174/370 (47%), Gaps = 2/370 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + +++  +   Y  R     A     +M + G    I+  +  +         D  L  +
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 76

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN- 310
           +  +   ++P+V T   +++ + KLG + +A+EV K ME  G   ++ TY+ LI+G    
Sbjct: 77  ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 136

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K   +    F++L+ K+GI+P+V+ +N +I  FC  GK+  A     EM+     P   T
Sbjct: 137 KDWANAFAIFEDLI-KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 195

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +  +I+G+ + G  +    +++ M  +G    + TYNALILGL ++ K +KA  ++ ++ 
Sbjct: 196 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 255

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + PN  TY+ ++ G     ++ +AF  +  +   G + + + +E L+   C++    
Sbjct: 256 LAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQ 315

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A  V  EM  + +  ++ I + L  G    G    A  L ++M+  G+ P        I
Sbjct: 316 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFI 375

Query: 551 NCAPENGEKE 560
           N   + G+ +
Sbjct: 376 NACSKAGDMQ 385


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 178/370 (48%), Gaps = 36/370 (9%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +  C K +  L  S+ +D A+     +  N   P++   N ++  FC+   I+ A
Sbjct: 87  GHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDLIAYNAIITGFCRANRIDSA 145

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN-LMEKN-------------- 327
            +V   M++ GF P + TYN LI   C++G+L  A++FKN L+++N              
Sbjct: 146 YQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEA 205

Query: 328 --------------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                                +QP++ T+N++I G C++G +  A +I S + +   +P+
Sbjct: 206 TLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPD 265

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V+TYN L+ G    G  E G  L  +M+  G + +++TY+ LI  +C++GK ++   L+K
Sbjct: 266 VITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLK 325

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+ K  L P+   Y  LI   C     + A ++   MI  GC P+   +  +++  C+ +
Sbjct: 326 DMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQK 385

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
             D A  +  ++ E   +P++   + ++S L   G    A+ +  +M  +G+ P G    
Sbjct: 386 RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYN 445

Query: 548 RTINCAPENG 557
             I+C   +G
Sbjct: 446 SLISCLCRDG 455



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 169/344 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +   +    +  +A     +M++ GF P I + N  + SL     +D AL F  +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +    P V T  +++ A    G I+ A+++   M  +   P + TYN++I G C +G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + +   G  P+VIT+N L+ G   +GK      + S+M A     NVVTY+ 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + G  E G  L ++M + G+K D   Y+ LI  LCKEG+   A  ++  +  + 
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            VP+   Y+ ++   C +K ++ A  +++ +   GC PN   +  + S         RA 
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRAL 426

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            ++LEML+K + PD I  + L S L   G  + A++L   ME+ 
Sbjct: 427 GMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEME 470



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/542 (22%), Positives = 235/542 (43%), Gaps = 68/542 (12%)

Query: 34  LSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRT---------LPEPKGQDLDFVNI 84
           ++T V+T D  P F NP  +  +   N   +PI + T         + +P+   LDF + 
Sbjct: 1   MTTTVST-DFLPLF-NPHPNRTNSHSNSRTLPILNETTNINRTLSSVSKPQTHTLDFKD- 57

Query: 85  AYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQK-DYVLSLEFFTWVQTHKPSSLTLETH 143
             +HL+ S  +   A + + + + ++H++ K  K D VL  +    + T K    T++  
Sbjct: 58  --THLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSK----TIDKA 111

Query: 144 SIVLHILTKNR--KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS--SP--LVFD 197
             V+HIL  +      +  +I+ G   ++  D   ++ D      RM +   SP  + ++
Sbjct: 112 IQVMHILENHGHPDLIAYNAIITGFCRANRIDSAYQVLD------RMKNKGFSPDIVTYN 165

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L  +   R    +A +   Q+      P + +    + + L    +D A+    EM   
Sbjct: 166 ILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEI 225

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+++T N ++   C+ G ++RA ++  ++ S G+ P V TYN L+ G  N+G     
Sbjct: 226 NLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAG 285

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            +  + M   G + NV+T++ LI   C+ GK+ E   +  +MK   + P+   Y+ LI  
Sbjct: 286 YELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAA 345

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G  ++   + + M+ +G   DI+ YN ++  LCK+ +  +A  + + L +    PN
Sbjct: 346 LCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 405

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE--- 494
           AS+Y+++ +      +  RA  +   M+  G  P+   +  L+S  C++   D A E   
Sbjct: 406 ASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLV 465

Query: 495 ----------------------------------VLLEMLEKCMAPDSIILSELYSGLHH 520
                                             VL  M++K   P+    + L  G+  
Sbjct: 466 DMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGF 525

Query: 521 CG 522
            G
Sbjct: 526 GG 527



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 141/280 (50%), Gaps = 6/280 (2%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P + + N  L  LL+  + +       +M       NV T ++++ + C+ G +E  
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V + K+M+  G  P    Y+ LI+  C +G + LA++  ++M  +G  P+++ +NT++  
Sbjct: 321 VGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILAC 380

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+ +  EA  IF ++     SPN  +YN++ +     G+      +  EML  G+  D
Sbjct: 381 LCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPD 440

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAFQL 460
            +TYN+LI  LC++G   +A  L+ D++  S    P+  +Y+ ++ G C       A ++
Sbjct: 441 GITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEV 500

Query: 461 YKSMIRSGCRPNKHIFEMLMSTF----CQNEDFDRAAEVL 496
             +M+  GCRPN+  +  L+       C N+  D A  ++
Sbjct: 501 LAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLV 540



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/303 (24%), Positives = 136/303 (44%), Gaps = 36/303 (11%)

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G    ++   +++ + G  P V     LI G      +  A++  +++E +G  P++
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY---GQV--------- 381
           I +N +I GFC+  ++  A ++   MK    SP++VTYN LI      G +         
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 382 -----------------------GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
                                  G  +    L +EML   ++ D+ TYN++I G+C+EG 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  ++  +      P+  TY+ L+ G   +   E  ++L   M+  GC  N   + +
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           L+S+ C++   +    +L +M +K + PD      L + L   G+ +LA+++   M   G
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 539 LLP 541
            +P
Sbjct: 367 CVP 369


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 207/461 (44%), Gaps = 52/461 (11%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI------LYSYRMCDSSPLVFDL 198
           +  H+L ++R +  S  +L  ++      L + L D +      L   R   +S  V D 
Sbjct: 70  LAAHLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALAS--VVDT 127

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L    A R    +A     ++R+    P   +CN  L  L       +    ++++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH---------- 308
            +PNV+T N+V+   CK G +  A  +F  M+ MG +P V T+N+LI G+          
Sbjct: 185 -APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 309 -------------------------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
                                    C  G +  A  +   M++ G+  NV+TF+T +  F
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+G + EA ++F++M+   ++ N  TY  LI+G  + G  +    L +EM+R G+ +++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TY  L+ GLCKE K  +A  +++ ++K  +  N   Y+ LI G  + KNSE+A  L   
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M   G   +  ++  L+   C     D A  +L +M E  + P+ II + +       GK
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
              A+ + +K     +L  GF       CA  +G  ++G +
Sbjct: 484 VPEAIAMLQK-----ILDSGFQPNVITYCALIDGLCKAGSI 519



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 197/465 (42%), Gaps = 58/465 (12%)

Query: 111 HVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           H+LL++ +D    L    + Q   P+  T    +IV+  L K  +   + S+   + +  
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTF---NIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 171 SFDLPSKL-FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
              LP  + F+S++  Y  C     V  L+                  +MR  G    + 
Sbjct: 219 C--LPDVVTFNSLIDGYGKCGELDEVEQLVE-----------------EMRRSGCKADVV 259

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + N  ++      R++ A G++  M+R  +  NV T +  + AFCK G++  A+++F  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G   +  TY  LI G C  G L  A+   + M + G+  NV+T+  L+ G CK+ K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +   M+   V  N + Y TLI+G+    NSE    L  EM   G+++DI  Y AL
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 410 ILGLC-----------------------------------KEGKTKKAAYLVKDLDKNSL 434
           I GLC                                   K GK  +A  +++ +  +  
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY ALI G C   + + A   +  M   G  PN   +  L+   C+N   + A +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  EM+ K M+ D ++ + L  G    G    A  L  KM   GL
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 156/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++        +   A   F +M++ G LP + + N  +        +D      +EMR
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+    +V T N +++ FCK G +E A   F  M+  G + +V T++T +   C +GL+ 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AMK    M   G+  N  T+  LI G CK G+L +A  +  EM    V  NVVTY  L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +         +   M + G++ + L Y  LI G      ++KA  L+ ++    L 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            + S Y ALI G C     + A  L   M  SG  PN  I+  +M    ++     A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L ++L+    P+ I    L  GL   G  + A+  F KM   GL P
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 159/382 (41%), Gaps = 45/382 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLD----SERVDIAL 248
           + F      +      R A   F QMR  G      + N+F  + L+D    + R+D A+
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGM-----ALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM R  +  NV T  +++   CK   +  A +V + ME  G   +   Y TLI GH
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                   A+   + M+  G++ ++  +  LI G C   KL EA  + ++M  + + PN 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + Y T+++   + G      ++ +++L +G + +++TY ALI GLCK G   +A      
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM-------- 480
           +    L PN   Y+AL+ G C       A QL+  M+  G   +K ++  L+        
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 481 ---------------------------STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
                                      S FC       A EV  EM+   +APD  + + 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 514 LYSGLHHCGKDELAMKLFRKME 535
           L S     G  E A+ L  +ME
Sbjct: 649 LISKYQKLGNLEEAISLQDEME 670



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 18/329 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + T+++++  L K RK   +E +LR +++         L+ ++++ + M  +S     
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLR-MMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL                  +M++ G    I      +  L +  ++D A     +M  +
Sbjct: 420 LL-----------------SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PN      +M A  K G +  A+ + + +   GF P+V TY  LI G C  G +  A
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +   N M   G+ PNV  +  L+ G CK G L+EA ++F+EM    +S + V Y  L++G
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + GN     +L  +M+ +G+++D+  Y   I G C      +A  +  ++  + + P+
Sbjct: 583 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 642

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIR 466
            + Y+ LI+      N E A  L   M R
Sbjct: 643 RAVYNCLISKYQKLGNLEEAISLQDEMER 671


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 173/347 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++  +  +    K   +A D + +M        I + +  +S      ++  A+G + +
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+P+VYT N+++ AFCK G ++ A      M   G  P + TYN+L+ G+C    
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNE 330

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +++A    N M   G+   V ++N +I GFCK   + +A ++F EM    + PNV+TYN+
Sbjct: 331 VNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNS 390

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L + M   G + DI+TY++++  LCK     KA  L+  L    
Sbjct: 391 LIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQG 450

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ LI G C     E A  +++ ++  G     + + +++  FC +  FD A 
Sbjct: 451 IRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +L +M +    PD+I    +   L    +++ A KL R+M  RGLL
Sbjct: 511 SLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLL 557



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 162/344 (47%), Gaps = 35/344 (10%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           + L SL+ S+     L  +++M    I PN    N++++ FC+LG+I  A  V   +  M
Sbjct: 75  QILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKM 134

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK---- 348
           G+ P   T NT I G C KG +  A+ F + +   G   + +++ TLI G CK G+    
Sbjct: 135 GYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAA 194

Query: 349 -------------------------------LHEANRIFSEMKATNVSPNVVTYNTLING 377
                                          +++A  ++SEM +  +S N+VTY+ LI+G
Sbjct: 195 LELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISG 254

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +  VG  +    L+ +M    I  D+ T+N L+   CKEG+ K+A   +  + K  + P+
Sbjct: 255 FCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPD 314

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++L+ G C+      A  +  +M   G       + ++++ FC+ +  D+A ++  
Sbjct: 315 IVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFK 374

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EM  K + P+ I  + L  GL   G+   A++L   M  RG  P
Sbjct: 375 EMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQP 418



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 144/292 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + +    +  +V   + ++ + CK   +  A +++  M S     ++ TY+ LIS
Sbjct: 194 ALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A+   N M    I P+V TFN L+  FCK+G++ EA    + M    + P
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 313

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VTYN+L++GY  V    M  S+   M   G+   + +YN +I G CK     +A  L 
Sbjct: 314 DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++    + PN  TY++LI G C       A +L   M   G +P+   +  ++   C+N
Sbjct: 374 KEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              D+A  +L+++ ++ + P+    + L  GL   G+ E A  +F  + ++G
Sbjct: 434 HLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKG 485



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 158/334 (47%), Gaps = 6/334 (1%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           +D+FDL S++        R   S+ + +  L   +    K ++A   F +M      P +
Sbjct: 227 NDAFDLYSEMVS------RRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDV 280

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            + N  + +     RV  A      M +  I P++ T N +M  +C +  +  A  +   
Sbjct: 281 YTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNT 340

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   G   +V +YN +I+G C   ++  AMK    M    I PNVIT+N+LI G CK G+
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGR 400

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A  +   M      P+++TY+++++   +    +   +L  ++   GI+ ++ TY  
Sbjct: 401 ISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTI 460

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI GLCK G+ + A  + +DL         +TY+ +I G C     + A  L   M  + 
Sbjct: 461 LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           C P+   +E+++ +    ++ D+A ++L EM+ +
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITR 554



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/401 (22%), Positives = 181/401 (45%), Gaps = 2/401 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           IL  ++ S  +     LF  +   YR    + + F++L   +        A     ++  
Sbjct: 76  ILGSLVKSKHYHTVLSLFQKM--EYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILK 133

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G+ P   + N F+       ++  AL F+ ++       +  +   +++  CK+G    
Sbjct: 134 MGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRA 193

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+E+ + ++       V  Y+T+I   C    ++ A    + M    I  N++T++ LI 
Sbjct: 194 ALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALIS 253

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC  GKL +A  +F++M + N++P+V T+N L++ + + G  +   +    M++ GIK 
Sbjct: 254 GFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKP 313

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI+TYN+L+ G C   +   A  ++  +    +     +Y+ +I G C  K  ++A +L+
Sbjct: 314 DIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLF 373

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M      PN   +  L+   C++     A E++  M ++   PD I  S +   L   
Sbjct: 374 KEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKN 433

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
              + A+ L  K++ +G+ P  +     I+   + G  E  
Sbjct: 434 HLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDA 474



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 35/283 (12%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   +    + + A +    M   G  P I + N  +        V++A      M 
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++  V + N+V++ FCK+ ++++A+++FK M      P+V TYN+LI G C  G +S
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402

Query: 316 LAMKFKNLMEKNGIQPNVITFNT-----------------------------------LI 340
            A++  +LM   G QP++IT+++                                   LI
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G+L +A  IF ++     +  V TY  +I G+   G  +   SL  +M  N   
Sbjct: 463 DGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            D +TY  +I  L  + +  KA  L++++    L+ +   Y +
Sbjct: 523 PDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGS 565



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 143/340 (42%), Gaps = 20/340 (5%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           S+R   ++   ++++   +   K    A   F +M      P + + N  +  L  S R+
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             AL     M      P++ T + ++ A CK  ++++A+ +   ++  G  P++ TY  L
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 305 ISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           I G C  G L  A   F++L+ K G    V T+  +I GFC  G   EA  + S+MK  +
Sbjct: 462 IDGLCKGGRLEDARNIFEDLLVK-GYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNS 520

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+ +TY  +I        ++    L  EM+  G+    L Y +  L          A 
Sbjct: 521 CIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSF----MAAPAH 576

Query: 424 YLVKDLDKNSLVPNASTYSAL----ITGQCVRKNS---ERAFQLYKSMIRSGCRPNKH-- 474
           +L  D  + +    +  ++ L    I   CV   S   ++  +    +I S C  +K   
Sbjct: 577 FLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGY 636

Query: 475 -----IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                 + +++  FC +  FD +  +L +M      PD++
Sbjct: 637 ILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAV 676



 Score = 39.3 bits (90), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 16/45 (35%), Positives = 26/45 (57%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           G+I  V TY  +I G C+ GL   ++   + ME NG  P+ +T++
Sbjct: 635 GYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTYD 679


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 166/318 (52%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  +  +   + V+ A   Y E    RI P+V+T N ++  FC +G ++ A+++
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDL 390

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M S   IP V T++ L+ G C  G +  A     +M K  I+P+V+T+++L+ G+C 
Sbjct: 391 FNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCL 450

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++++A  IF+ M    V+ NV +YN +ING+ ++   +    L++EM    I  D++T
Sbjct: 451 VNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVIT 510

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++LI GLCK G+   A  LV ++      P+  TY++++   C + + ++A  L   + 
Sbjct: 511 YSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLK 570

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G RP+ + + +L+   CQ+   + A +V  ++L K    D    + +  G    G  +
Sbjct: 571 GQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFD 630

Query: 526 LAMKLFRKMEIRGLLPKG 543
            A+ L  KME  G +P  
Sbjct: 631 EALALLSKMEENGCIPDA 648



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 172/341 (50%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D + +       P + + N  +S      ++  A+  + +M    I P+VYT 
Sbjct: 347 KHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTF 406

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           ++++  FCK G I+ A  V   M      P V TY++L+ G+C    ++ A    N M  
Sbjct: 407 SILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSH 466

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G+  NV ++N +I GFCK   + EA ++F EM    + P+V+TY++LI+G  + G    
Sbjct: 467 RGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISY 526

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L +EM   G + DI+TYN+++  LCK+    KA  L+  L    + P+ +TY+ L+ 
Sbjct: 527 ALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVK 586

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     E A ++++ ++  G   + + + +++  FC    FD A  +L +M E    P
Sbjct: 587 GLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIP 646

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           D+     +   L    ++++A KL R+M +RGLL    D L
Sbjct: 647 DAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVALTDDL 687



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 150/286 (52%)

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +N   P+  TL   +  FC  G I +A+     + +MGF     +Y TLI+G C  G   
Sbjct: 256 KNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETK 315

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++     +   +QP+V+ +NT+I G CK   +++A  ++SE  +  + P+V TYN LI
Sbjct: 316 AALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALI 375

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+  VG  +    L+ +M    I  D+ T++ L+ G CK+G  K+A  ++  + K S+ 
Sbjct: 376 SGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIK 435

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS+L+ G C+     +A  ++ +M   G   N   + ++++ FC+ +  D A ++
Sbjct: 436 PDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKL 495

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  K + PD I  S L  GL   G+   A++L  +M  RG  P
Sbjct: 496 FKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQP 541



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 3/288 (1%)

Query: 254 MRRNR---ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +RRN    + P+V   N ++   CK   +  A +++    S    P V TYN LISG C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L  A+   N M    I P+V TF+ L+ GFCK G + EA  + + M   ++ P+VVT
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y++L++GY  V       S++  M   G+  ++ +YN +I G CK     +A  L K++ 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + P+  TYS+LI G C       A +L   M   G +P+   +  ++   C+    D
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +A  +L ++  + + PD    + L  GL   GK E A K+F  + ++G
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKG 608



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 138/273 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L   +      + A +    M      P + + +  +        V+ A   +  M 
Sbjct: 406 FSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMS 465

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++ NV + N++++ FCK+ +++ A+++FK M      P V TY++LI G C  G +S
Sbjct: 466 HRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRIS 525

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++  + M   G QP++IT+N+++   CKK  + +A  + +++K   + P++ TY  L+
Sbjct: 526 YALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILV 585

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G  Q G  E    ++E++L  G  +D+  Y  +I G C +G   +A  L+  +++N  +
Sbjct: 586 KGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCI 645

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           P+A TY  +I     +  ++ A +L + MI  G
Sbjct: 646 PDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 157/322 (48%), Gaps = 6/322 (1%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   +   F+       ++  AL F+ ++       +  +   +++  CK+G  + A
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAA 317

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E+ +  +     P V  YNT+I G C    ++ A    +      I P+V T+N LI G
Sbjct: 318 LELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISG 377

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC  GKL +A  +F++M + N+ P+V T++ L++G+ + GN +   ++   M++  IK D
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TY++L+ G C   +  KA  +   +    +  N  +Y+ +I G C  K  + A +L+K
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL---H 519
            M      P+   +  L+   C++     A E++ EM  +   PD I  + +   L   H
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557

Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
           H  K   A+ L  K++ +G+ P
Sbjct: 558 HVDK---AITLLTKLKGQGIRP 576



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 163/380 (42%), Gaps = 61/380 (16%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF------ 286
           K L SL+ S+     L   ++M    I  N    N+++++FC+LG+I  A  V       
Sbjct: 115 KILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNILINSFCQLGLIPFAFSVLTRGVYW 174

Query: 287 ----------KNMESMGFIPSVTTY-----NTLISGHCNKGLLSLAMKFKNLME------ 325
                     KN+E    +  +           +       L ++   FK L+E      
Sbjct: 175 IEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDFLQSRLFNVLHSFKILIEYHKTFI 234

Query: 326 ---------------------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
                                KNG +P+ IT  T I GFC KG++H+A     ++ A   
Sbjct: 235 KQKCLLKSFEISIEYTPPKILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGF 294

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             + V+Y TLING  +VG ++    L        ++ D++ YN +I G+CK+     A  
Sbjct: 295 HLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFD 354

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L  +     + P+  TY+ALI+G C+    + A  L+  M      P+ + F +L+  FC
Sbjct: 355 LYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFC 414

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG---- 538
           ++ +   A  VL  M+++ + PD +  S L  G  +C  +E+  A  +F  M  RG    
Sbjct: 415 KDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDG--YCLVNEVNKAESIFNTMSHRGVTAN 472

Query: 539 -----LLPKGFDKLRTINCA 553
                ++  GF K++ ++ A
Sbjct: 473 VQSYNIMINGFCKIKMVDEA 492



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 2/267 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y    +   A   F  M   G    ++S N  ++     + VD A+  +KEM   +
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I P+V T + ++   CK G I  A+E+   M   G  P + TYN+++   C K  +  A+
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ++  GI+P++ T+  L+ G C+ GKL +A ++F ++     + +V  Y  +I G+
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G  +   +L  +M  NG   D  TY  +IL L ++ +   A  L++++    L+   
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL--V 681

Query: 439 STYSALITGQCVRKNSERAFQLYKSMI 465
           +    L+    VR+       L+ + I
Sbjct: 682 ALTDDLVASILVRRTWCARLALWVTFI 708



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 2/218 (0%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           S+R   ++   ++++   +   K    A   F +M      P + + +  +  L  S R+
Sbjct: 465 SHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRI 524

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             AL    EM      P++ T N ++ A CK   +++A+ +   ++  G  P + TY  L
Sbjct: 525 SYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTIL 584

Query: 305 ISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           + G C  G L  A K F++L+ K G   +V  +  +I GFC KG   EA  + S+M+   
Sbjct: 585 VKGLCQSGKLEDARKVFEDLLVK-GYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             P+  TY  +I    +   ++M   L  EM+  G+ V
Sbjct: 644 CIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLV 681


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 172/346 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L   +  R +   A     +M   G+ P I + +  L+     +R+  A+    +M 
Sbjct: 85  YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 144

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+  T   ++H          AV +   M   G  P++ TY  +++G C +G   
Sbjct: 145 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 204

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+   N ME   I+ +V+ FNT+I   CK   + +A  +F EM+   + PNVVTY++LI
Sbjct: 205 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G     + L  +M+   I  +++T+NALI    KEGK  +A  L  D+ K S+ 
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 324

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY++L+ G C+    ++A Q+++ M+   C P+   +  L+  FC+++  +   E+
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 384

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             EM  + +  D++  + L  GL H G  + A K+F++M   G+ P
Sbjct: 385 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 183/380 (48%), Gaps = 14/380 (3%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +  R+ D+  LV  ++          F T  H      K   A     +M  
Sbjct: 121 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 180

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L      D+AL    +M   +I  +V   N ++ + CK   ++ 
Sbjct: 181 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 240

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +FK ME+ G  P+V TY++LIS  C+ G  S A +  + M +  I PN++TFN LI 
Sbjct: 241 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 300

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GK  EA +++ +M   ++ P++ TYN+L+NG+      +    ++E M+      
Sbjct: 301 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 360

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TYN LI G CK  + +    L +++    LV +  TY+ LI G     + + A +++
Sbjct: 361 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 420

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+  G  P+   + +L+   C N   ++A EV   M +  +  D  I + +  G+   
Sbjct: 421 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 480

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +    LF  + ++G+ P
Sbjct: 481 GKVDDGWDLFCSLSLKGVKP 500



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 13/362 (3%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  K  +A   F  M     LP I   NK LS++   ++ D+ +   ++M+R  I   +Y
Sbjct: 24  HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 83

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N++++ FC+   I  A+ +   M  +G+ PS+ T ++L++G+C+   +S A+   + M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G +P+ ITF TLI G     K  EA  +   M      PN+VTY  ++NG  + G++
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           ++  +L  +M    I+ D++ +N +I  LCK      A  L K+++   + PN  TYS+L
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I+  C       A QL   MI     PN   F  L+  F +   F  A ++  +M+++ +
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 505 APDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
            PD    + L +G   C  D L  A ++F  M  +   P         KGF K + +   
Sbjct: 324 DPDIFTYNSLVNGF--CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 381

Query: 554 PE 555
            E
Sbjct: 382 TE 383



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 165/345 (47%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           ++  ++F+ +  +    +   +A + F +M   G  P + + +  +S L    R   A  
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M   +I+PN+ T N ++ AF K G    A +++ +M      P + TYN+L++G C
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A +    M      P+V+T+NTLI GFCK  ++ +   +F EM    +  + V
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 398

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TLI G    G+ +    ++++M+ +G+  DI+TY+ L+ GLC  GK +KA  +   +
Sbjct: 399 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+ +  +   Y+ +I G C     +  + L+ S+   G +PN   +  ++S  C     
Sbjct: 459 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 518

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             A  +L +M E    P+S   + L       G    + +L R+M
Sbjct: 519 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 158/312 (50%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           + L + L   ++D A+G +  M ++R  P++   N ++ A  K+   +  + + + M+ +
Sbjct: 17  EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
             +  + TYN LI+  C +  +SLA+     M K G +P+++T ++L+ G+C   ++ +A
Sbjct: 77  EIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 136

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  +M      P+ +T+ TLI+G      +    +L + M++ G + +++TY  ++ G
Sbjct: 137 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 196

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G T  A  L+  ++   +  +   ++ +I   C  ++ + A  L+K M   G RPN
Sbjct: 197 LCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 256

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+S  C    +  A+++L +M+EK + P+ +  + L       GK   A KL+ 
Sbjct: 257 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 316

Query: 533 KMEIRGLLPKGF 544
            M  R + P  F
Sbjct: 317 DMIKRSIDPDIF 328



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 125/266 (46%), Gaps = 2/266 (0%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
             KL+D ++   R  D     ++ L   +    +   A   F  M      P + + N  
Sbjct: 311 AEKLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +     S+RV+     ++EM    +  +  T   ++      G  + A +VFK M S G 
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P + TY+ L+ G CN G L  A++  + M+K+ I+ ++  + T+I G CK GK+ +   
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  +    V PNVVTYNT+I+G       +   +L ++M  +G   +  TYN LI    
Sbjct: 489 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 548

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNAST 440
           ++G    +A L++++     V +AST
Sbjct: 549 RDGDKAASAELIREMRSCRFVGDAST 574



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G   S   +  ++LF  +  S+R      + +  L +   H     NA   F QM 
Sbjct: 367 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + +  L  L ++ +++ AL  +  M+++ I  ++Y    ++   CK G ++
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 484

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++F ++   G  P+V TYNT+ISG C+K LL  A      M+++G  PN  T+NTLI
Sbjct: 485 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 544

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
               + G    +  +  EM++     +  T   + N
Sbjct: 545 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 580


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDI 246
           C  +   +++L K      + + A +    M D G    P + S    ++       +D 
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G Y EM    I PNV T N ++ A CK   +++A+EV  +M   G +P+  TYN+++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA ++F  M    + P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TY TL+ GY   G       L + M+RNGI  +   ++ LI    K+GK  +A  + 
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L P+  TY  +I   C     E A + ++ MI     P   ++  L+ + C  
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + +D+A E++LEML++ +  D+I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKP 512



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 168/348 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +       +    A +    M   G +P   + N  +     S +   A+GF K+
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + P+V T N +M   CK G    A ++F +M   G  P +TTY TL+ G+  KG 
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L       +LM +NGI PN   F+ LI  + K+GK+ +A  +FS+M+   ++P+ VTY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I    + G  E     +E+M+   +    + YN+LI  LC   K  KA  L+ ++    
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +   ++++I   C       + +L+  M+R G +PN   +  L+  +C     D A 
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L  M+   M PD +  + L +G     + E A+ LFR+ME  G+ P
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 161/313 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+SP     N ++H+ C     ++A E+   M   G       +N++I  HC +G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++PN+IT++TLI G+C  GK+ EA ++ + M +  + P+ VTYNTL
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 676 LFAALSANGLVPD 688



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++P+  T   V+   CK G +E A+  F+ M      P    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI   C       A +    M   GI  + I FN++I   CK+G++ E+ ++F  M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V PN++TY+TLI+GY   G  +    L   M+  G+K D +TYN LI G CK  + + A
Sbjct: 509 GVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L ++++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +   GL+P 
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP- 687

Query: 543 GFDKLRTINCAPEN 556
               +RT +   EN
Sbjct: 688 ---DVRTYSLMAEN 698



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++ Y  +M D   SP  +V++ L  +     K+  A +   +M D G  L  I  
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-- 480

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + PN+ T + ++  +C  G ++ A ++ 
Sbjct: 481 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLL 537

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TYNTLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I  L K G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +GC  N  +   ++    Q  D  RA   L  + EK
Sbjct: 718 NGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 133/304 (43%), Gaps = 18/304 (5%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIER-----AVEVFKNMESMG---FIPSVTTY 301
           F + +RR R   ++Y LN      C L  + R     AV  +  M   G     P++ TY
Sbjct: 42  FDELLRRGR-GASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMK 360
             LI   C  G L L       + K G + + I F  L+ G C   +  +A + +   M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGK 418
                PNV +YN L+ G      S+    L + M  +G     D+++Y  +I G  KEG 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA     ++    ++PN  TY+++I   C  +  ++A ++  SM+++G  PN   +  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  +C +     A   L +M    + PD +  + L   L   G+   A K+F  M  RG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 539 LLPK 542
           L P+
Sbjct: 335 LKPE 338



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 26/345 (7%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFK 201
           ++H L    K+  ++ ++  +LD     L +  F+SI+ S+    R+ +S  L FDL+ +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVR 507

Query: 202 T---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                           Y    K   AT     M   G  P   + N  ++      R++ 
Sbjct: 508 IGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++EM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A  + 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V TY+ +     + G  E    L+  M  NG   +    N+++  L + G   +A   
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 426 VKDLDKNSLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRS 467
           +  +D+      AST S    L++G   ++      + YKS I S
Sbjct: 747 LFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIES 791


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 207/460 (45%), Gaps = 50/460 (10%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMC-----DSSPLVFDLL 199
           +  H+L ++R +  S  +L  ++      L + L D +L+   +       +   V D L
Sbjct: 70  LAAHLLARDRLYAHSRRVLSRLVALRRPHLAASLVD-LLHRAALALGPRRSALASVVDTL 128

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
               A R    +A     ++R+    P   +CN  L  L       +    ++++     
Sbjct: 129 LSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP---- 184

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH----------- 308
           +PNV+T N+V+   CK G +  A  +F  M+ MG +P V T+N+LI G+           
Sbjct: 185 APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 309 ------------------------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
                                   C  G +  A  +   M++ G+  NV+TF+T +  FC
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+G + EA ++F++M+   ++ N  TY  LI+G  + G  +    L +EM+R G+ ++++
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TY  L+ GLCKE K  +A  +++ ++K  +  N   Y+ LI G  + KNSE+A  L   M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   +  ++  L+   C     D A  +L +M E  + P+ II + +       GK 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
             A+ + +K     +L  GF       CA  +G  ++G +
Sbjct: 485 PEAIAMLQK-----ILDSGFQPNVITYCALIDGLCKAGSI 519



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 197/465 (42%), Gaps = 58/465 (12%)

Query: 111 HVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           H+LL++ +D    L    + Q   P+  T    +IV+  L K  +   + S+   + +  
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTF---NIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 171 SFDLPSKL-FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
              LP  + F+S++  Y  C     V  L+                  +MR  G    + 
Sbjct: 219 C--LPDVVTFNSLIDGYGKCGELDEVEQLVE-----------------EMRRSGCKADVV 259

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + N  ++      R++ A G++  M+R  +  NV T +  + AFCK G++  A+++F  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G   +  TY  LI G C  G L  A+   + M + G+  NV+T+  L+ G CK+ K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +   M+   V  N + Y TLI+G+    NSE    L  EM   G+++DI  Y AL
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 410 ILGLC-----------------------------------KEGKTKKAAYLVKDLDKNSL 434
           I GLC                                   K GK  +A  +++ +  +  
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  TY ALI G C   + + A   +  M   G  PN   +  L+   C+N   + A +
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  EM+ K M+ D ++ + L  G    G    A  L  KM   GL
Sbjct: 560 LFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 156/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++        +   A   F +M++ G LP + + N  +        +D      +EMR
Sbjct: 191 FNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMR 250

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R+    +V T N +++ FCK G +E A   F  M+  G + +V T++T +   C +GL+ 
Sbjct: 251 RSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR 310

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AMK    M   G+  N  T+  LI G CK G+L +A  +  EM    V  NVVTY  L+
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLV 370

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  +         +   M + G++ + L Y  LI G      ++KA  L+ ++    L 
Sbjct: 371 DGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLE 430

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            + S Y ALI G C     + A  L   M  SG  PN  I+  +M    ++     A  +
Sbjct: 431 LDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAM 490

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L ++L+    P+ I    L  GL   G  + A+  F KM   GL P
Sbjct: 491 LQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDP 536



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 159/382 (41%), Gaps = 45/382 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLD----SERVDIAL 248
           + F      +      R A   F QMR  G      + N+F  + L+D    + R+D A+
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGM-----ALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM R  +  NV T  +++   CK   +  A +V + ME  G   +   Y TLI GH
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                   A+   + M+  G++ ++  +  LI G C   KL EA  + ++M  + + PN 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + Y T+++   + G      ++ +++L +G + +++TY ALI GLCK G   +A      
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM-------- 480
           +    L PN   Y+AL+ G C       A QL+  M+  G   +K ++  L+        
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 481 ---------------------------STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
                                      S FC       A EV  EM+   +APD  + + 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 514 LYSGLHHCGKDELAMKLFRKME 535
           L S     G  E A+ L  +ME
Sbjct: 649 LISKYQKLGNLEEAISLQDEME 670



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 151/329 (45%), Gaps = 18/329 (5%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + T+++++  L K RK   +E +LR +++         L+ ++++ + M  +S     
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLR-MMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL                  +M++ G    I      +  L +  ++D A     +M  +
Sbjct: 420 LL-----------------SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + PN      +M A  K G +  A+ + + +   GF P+V TY  LI G C  G +  A
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +   N M   G+ PNV  +  L+ G CK G L+EA ++F+EM    +S + V Y  L++G
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + GN     +L  +M+ +G+++D+  Y   I G C      +A  +  ++  + + P+
Sbjct: 583 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 642

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIR 466
            + Y+ LI+      N E A  L   M R
Sbjct: 643 RAVYNCLISKYQKLGNLEEAISLQDEMER 671


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 163/341 (47%), Gaps = 37/341 (10%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +L  + ++D A     EM R ++ P+V+T N+V+   CK   I RA+E F+ M    
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 73

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P V TYNTL+ G C  G ++ A      ME  GI P+ +T+ TLI  FCK  +   A 
Sbjct: 74  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +   M +   SP V +Y ++ING  +    +    L+EEM   G K D +TYN LI GL
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C + +  +A  L+  + +NS  P+  T++ALI G C     + AF L++ M + GC P+ 
Sbjct: 192 CVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 251

Query: 474 HIFEMLMSTFC---------------------------------QNEDFDRAAEVLLEML 500
               +L+S  C                                 +   FDRAA +L +M 
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMA 311

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +AP+ +  +  + GL    +   A + FR+M  +G+ P
Sbjct: 312 RRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP 352



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 172/423 (40%), Gaps = 76/423 (17%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + L +  L K      K   A  T  +M     +P + + N  + +L  + R+  A+
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++ M      P+V T N ++   CK G + +A  +F +ME  G  PS  TY TLI   
Sbjct: 66  EFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 309 CNK-------GLLSL----------------------------AMKFKNLMEKNGIQPNV 333
           C         GLL L                            A +    M+  G +P+ 
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T+NTLI G C K +LHEA  + + M   +  P+ +T+  LI G       +    L++ 
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTK--------------------------------- 420
           M + G   D++T+  L+  LC   K +                                 
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFD 301

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +AA L++ + +  + PN  TY+A   G    K   RA++ ++ M+  G  P+   + +L+
Sbjct: 302 RAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLV 361

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRG 538
             FC+    D A +++  M +  + P+ +  + L    HHC  GK E   +L   M  RG
Sbjct: 362 DGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVG--HHCRKGKVEAIGELLHTMVSRG 419

Query: 539 LLP 541
             P
Sbjct: 420 RQP 422



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 160/391 (40%), Gaps = 33/391 (8%)

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D+     ++  +I +   M +   + ++ L        +   A   F  M   G  P   
Sbjct: 53  DTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 112

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           +    +       + + A G  + M   + SP VY+   +++  CK   +++A ++F+ M
Sbjct: 113 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 172

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           +  G  P   TYNTLI G C K  L  A     +M +N  QP+ ITF  LI G C   ++
Sbjct: 173 KLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRI 232

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGY------------------------------- 378
            EA  +F  M     +P++VT+  L++                                 
Sbjct: 233 KEAFVLFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFR 292

Query: 379 --GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
             G+    +  A L ++M R G+  +++TY A   GL    +  +A    + + +  + P
Sbjct: 293 ELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP 352

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   Y+ L+ G C     + A ++ + M +SG  PN   +  L+   C+    +   E+L
Sbjct: 353 DMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELL 412

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
             M+ +   PD    S L +GL   G+ + A
Sbjct: 413 HTMVSRGRQPDVATWSTLVAGLFRVGQVDAA 443



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/329 (24%), Positives = 129/329 (39%), Gaps = 46/329 (13%)

Query: 214 DTFCQM----RDYGFL---------PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
           D FC+M      YG L         P + S    ++ L  + +VD A   ++EM+     
Sbjct: 119 DVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCK 178

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+  T N ++H  C    +  A ++   M    F P   T+  LI G C    +  A   
Sbjct: 179 PDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVL 238

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLH------------------------------ 350
              M K G  P+++T   L+   C + KL                               
Sbjct: 239 FQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRR 298

Query: 351 ---EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
               A R+  +M    V+PNVVTY     G G           +  ML  GI+ D++ YN
Sbjct: 299 GFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYN 358

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ G CK  +   A  +V+ +D++ L PN  TY+ L+   C +   E   +L  +M+  
Sbjct: 359 VLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 418

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           G +P+   +  L++   +    D A   L
Sbjct: 419 GRQPDVATWSTLVAGLFRVGQVDAAYSFL 447



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 100/239 (41%), Gaps = 6/239 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +D       LF  +  + + C    +   +L      R+K R A      +R
Sbjct: 221 ALIEGLCTTDRIKEAFVLFQGM--AKQGCAPDLVTHTVLVSKLCIRRKLRPALSV---VR 275

Query: 221 DYGFLP-IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           +Y   P  +         L      D A    ++M R  ++PNV T              
Sbjct: 276 NYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEG 335

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            RA   F+ M   G  P +  YN L+ G C    L +A K    M+++G+ PN++T+NTL
Sbjct: 336 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTL 395

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +   C+KGK+     +   M +    P+V T++TL+ G  +VG  +   S     +  G
Sbjct: 396 VGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L TH++++  L   RK + + S++R                    +Y  C  + +++  +
Sbjct: 251 LVTHTVLVSKLCIRRKLRPALSVVR--------------------NYPACPEAVILYTPI 290

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR--- 256
           F+    R+ F  A     +M   G  P + +   F   L D +     +  Y+E RR   
Sbjct: 291 FRELGRRRGFDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKE---GMRAYREFRRMLE 347

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
             I P++   N+++  FCK   ++ A ++ + M+  G  P++ TYNTL+  HC KG +  
Sbjct: 348 QGIEPDMVAYNVLVDGFCKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEA 407

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
             +  + M   G QP+V T++TL+ G  + G++  A
Sbjct: 408 IGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAA 443



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 86/187 (45%), Gaps = 8/187 (4%)

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           IFS+    +  PN ++Y  L+    + G  +   S   EM R  +  D+ TYN +I  LC
Sbjct: 1   IFSQ----DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLC 56

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K  +  +A    + + +    P+  TY+ L+ G C      +A  L+ SM  +G  P+  
Sbjct: 57  KARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDV 112

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+  FC+   F+ A  +L  M  +  +P       + +GL    K + A +LF +M
Sbjct: 113 TYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEM 172

Query: 535 EIRGLLP 541
           ++ G  P
Sbjct: 173 KLAGCKP 179


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 183/362 (50%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L KT     K  +A D F  M      P I   N+ LS+++  ++ D+ +   K+M    
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I  ++YT N+V++ FC    +  A+ +   M  +G+ P   T  +L++G C +  +S A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+++ +N +I   CK  ++++A   F E++   + PNVVTY  L+NG 
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                    A L  +M++  I  +++TY+AL+    K GK  +A  L +++ + S+ P+ 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS+LI G C+    + A Q++  M+  GC  +   +  L++ FC+ +  +   ++  E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M ++ +  +++  + L  G    G  + A + F +M+  G+ P  +     +    +NGE
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 559 KE 560
            E
Sbjct: 416 LE 417



 Score =  168 bits (426), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 177/359 (49%), Gaps = 8/359 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +  +    K+  +A D F ++   G  P + +    ++ L +S R   A     +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M + +I+PNV T + ++ AF K G +  A E+F+ M  M   P + TY++LI+G C    
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  +LM   G   +V+++NTLI GFCK  ++ +  ++F EM    +  N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ Q G+ +     + +M   GI  DI TYN L+ GLC  G+ +KA  + +D+ K  
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +  TY+ +I G C     E A+ L+ S+   G +P+   +  +MS  C         
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            +  +M ++ +  +   LS+        G   L+ +L +KM   G  P     +++  C
Sbjct: 491 ALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVC 541



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 161/324 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G+ P   +    ++      RV  A+    +M      P++   N ++ + CK  
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + FK +E  G  P+V TY  L++G CN    S A +  + M K  I PNVIT++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+  F K GK+ EA  +F EM   ++ P++VTY++LING       +    +++ M+  
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+++YN LI G CK  + +    L +++ +  LV N  TY+ LI G     + ++A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            + +  M   G  P+   + +L+   C N + ++A  +  +M ++ M  D +  + +  G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           +   GK E A  LF  + ++GL P
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKP 468



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 17/266 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+   D  D  +++FD  L   + C +  + ++ L   +   K+  +    F +M 
Sbjct: 300 SLINGLCLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +     +  VD A  F+ +M    ISP+++T N+++   C  G +E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +F++M+       + TY T+I G C  G +  A      +   G++P+++T+ T++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C KG LHE   ++++MK   +  N  T +         G+  + A L ++ML  G  
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCG-- 527

Query: 401 VDILTYNALILGLCKEGKTKKAAYLV 426
                Y   +L   K G  KKA  L+
Sbjct: 528 -----YAPSLLKDIKSGVCKKALSLL 548


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 172/357 (48%), Gaps = 36/357 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LSSL+ ++R    +  +K+   N I+P++ TL+++++ FC L  I  A  VF N+  
Sbjct: 65  NNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILK 124

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK--- 348
            G+ P+  T NTLI G C  G +  A+ F + +   G Q + +++ TLI G CK G+   
Sbjct: 125 RGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 184

Query: 349 --------------------------------LHEANRIFSEMKATNVSPNVVTYNTLIN 376
                                           L +A  ++SEM    +SPNV TY TLI+
Sbjct: 185 VARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIH 244

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +GN +   SL  EM    I  D+ T+N LI  L KEGK  +A  L +++   ++ P
Sbjct: 245 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFP 304

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY++LI G C   + ERA  L K M   G +PN + + +L+   C+    + A +  
Sbjct: 305 NIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFF 364

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
             +L K    +    + + +GL   G     M L  KME +G +P      +TI CA
Sbjct: 365 QHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAIT-FKTIICA 420



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 158/345 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
             +L   + H      A   F  +   G+ P   + N  +  L     +  AL F+ ++ 
Sbjct: 99  LSILINCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVV 158

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  +   +++  CK G  +    + + +E     P +  Y T+I   C   LL 
Sbjct: 159 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLG 218

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M   GI PNV T+ TLI GFC  G L EA  + +EMK  N++P+V T+N LI
Sbjct: 219 DACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 278

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   + G  +   SL+EEM    +  +I+TY +LI GLCK    ++A  L K + +  + 
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  +Y+ L+   C     E A Q ++ ++  G   N   + ++++  C+   F    ++
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +M  K   P++I    +   L    +++ A K  R+M  RGLL
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGLL 443



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 144/317 (45%), Gaps = 2/317 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R  P  +  N ++ +  K       + +FK  E  G  P + T + LI+
Sbjct: 45  AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             C+   ++ A   F N++ K G  PN IT NTLI G C  G++  A     ++ A    
Sbjct: 105 CFCHLTHITFAFSVFANIL-KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            + V+Y TLING  + G ++  A L  ++  + +K D++ Y  +I  LCK      A  L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++    + PN  TY+ LI G C+  N + AF L   M      P+ + F +L+    +
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
               D A  +  EM  K M P+ +  + L  GL      E A+ L +KM+ +G+ P  + 
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343

Query: 546 KLRTINCAPENGEKESG 562
               ++   + G  E+ 
Sbjct: 344 YTILLDALCKGGRLENA 360


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 163/326 (50%), Gaps = 7/326 (2%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           FR  +D  C    Y +       +  +  L +  R+D A+    EM+     PN    N+
Sbjct: 23  FRGMSDRNCVADGYTY-------STLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNV 75

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++ A CK G + RA ++  NM   G +P+  TYN+L+ G C KG L  AM   N M  N 
Sbjct: 76  LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK 135

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             PN ITF TL+ GF K G+  +  R+   ++      N  +Y++LI+G  + G  E G 
Sbjct: 136 CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGM 195

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            L++EM+  G K + + Y+ALI GLC+EGK  +A   + ++      PN+ TYS+L+ G 
Sbjct: 196 QLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGY 255

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               +  +A  ++K M  + C  ++  + +L++  C+N     A  V  +ML + +  D 
Sbjct: 256 FEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDV 315

Query: 509 IILSELYSGLHHCGKDELAMKLFRKM 534
           +  S +  G  +    E  MKLF +M
Sbjct: 316 VAYSSMIHGFCNAQLVEQGMKLFNQM 341



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 135/266 (50%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++ A C++G +++AVEVF+ M     +    TY+TL+ G CN+G +  A+   + M+  G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             PN + FN LI   CKKG L  A+++   M      PN VTYN+L++G    G  +   
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           SL   M+ N    + +T+  L+ G  K G+      ++  L++     N  +YS+LI+G 
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                 E   QL+K M+  GC+PN  ++  L+   C+    D A E L+EM  K   P+S
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 509 IILSELYSGLHHCGKDELAMKLFRKM 534
              S L  G    G    A+ ++++M
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEM 271



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 162/351 (46%), Gaps = 4/351 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+ +    D    L D +         +P+ F++L      +     A+     M 
Sbjct: 40  TLMHGLCNEGRIDEAVSLLDEMQVEGTF--PNPVAFNVLISALCKKGDLSRASKLVDNMF 97

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +  L    ++D A+     M  N+  PN  T   ++  F K G   
Sbjct: 98  LKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRAL 157

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             V V  ++E  G+  +  +Y++LISG   +G     M+    M + G +PN I ++ LI
Sbjct: 158 DGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALI 217

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++GK  EA     EMK    +PN  TY++L+ GY + G+      +++EM  N   
Sbjct: 218 DGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCN 277

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
              + Y+ LI GLCK GK K+A  + K +    +  +   YS++I G C  +  E+  +L
Sbjct: 278 HHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKL 337

Query: 461 YKSMI--RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +  M+      +P+   + +L++ FC      RA ++L  ML++   PD I
Sbjct: 338 FNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 388



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 101/203 (49%)

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++   C+ G + +A  +F  M   N   +  TY+TL++G    G  +   SL +EM   G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              + + +N LI  LCK+G   +A+ LV ++     VPN  TY++L+ G C++   ++A 
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   M+ + C PN   F  L+  F ++        VL+ + EK    +    S L SGL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              GK E  M+L+++M  +G  P
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKP 208



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/255 (23%), Positives = 113/255 (44%), Gaps = 23/255 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P     +  +  L    + D A  +  EM+    +PN +T + +M  + + G
Sbjct: 200 EMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAG 259

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I +A+ V+K M           Y+ LI+G C  G L  A+     M   GI+ +V+ ++
Sbjct: 260 DIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYS 319

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           ++I GFC    + +  ++F++M   N  + P+VVTYN L+N +    +      +   ML
Sbjct: 320 SMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTML 379

Query: 396 RNGIKVDILT---------------------YNALILGLCKEGKTKKAAYLVKDLDKNSL 434
             G   D +T                      + L++ L K  +T  A+ +++ + +  L
Sbjct: 380 DQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTVGASNIIEVMLQKFL 439

Query: 435 VPNASTYSALITGQC 449
           +P  ST++  +   C
Sbjct: 440 LPKPSTWALAVQQLC 454



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 80/183 (43%)

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +VGN +    ++  M       D  TY+ L+ GLC EG+  +A  L+ ++      PN  
Sbjct: 12  RVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPV 71

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            ++ LI+  C + +  RA +L  +M   GC PN+  +  L+   C     D+A  +L  M
Sbjct: 72  AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 131

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEK 559
           +     P+ I    L  G    G+    +++   +E +G     F     I+   + G+ 
Sbjct: 132 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 191

Query: 560 ESG 562
           E G
Sbjct: 192 EHG 194



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+   + + +L        K + A   + QM   G    + + +  +    +++ V+  +
Sbjct: 276 CNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGM 335

Query: 249 GFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
             + +M     ++ P+V T N++++AFC    + RA+++   M   G  P   T +  +
Sbjct: 336 KLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFL 394


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 170/365 (46%), Gaps = 36/365 (9%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K F  A+D  C  RD    P +   N  L +LL    V   +  Y  MR+  + PNVYT 
Sbjct: 54  KTFYRASDLGC--RD----PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTY 107

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF------ 320
           N+++ A C+   ++ A ++   M   G  P   ++ T++SG C  G +  A  F      
Sbjct: 108 NLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVP 167

Query: 321 ------------------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
                                    N M + G+QPNV+T+ T++  FCK  +L  A  I 
Sbjct: 168 VQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAIL 227

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + M +   +PNV+T+  L+ G+ + G      S++  M+  G     ++YN LI GLC  
Sbjct: 228 ARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCI 287

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  K A      + +N+L+PNA+TYS L+ G     + + A  ++  M  SGC+PN  ++
Sbjct: 288 GDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVY 347

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             ++   C+   FD+A  ++ +ML     P+++  + L   L  CG+   A+ +F  M  
Sbjct: 348 TNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRR 407

Query: 537 RGLLP 541
            G  P
Sbjct: 408 NGCHP 412



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 169/383 (44%), Gaps = 7/383 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++R +  +D  D   K+ D +  S + C    +    +        +   A     +   
Sbjct: 110 LIRALCQNDRVDAARKMLDEM--SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET-- 165

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
              +P+  S N  + +L    R+        EM +  + PNV T   ++ AFCK   +  
Sbjct: 166 ---VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRM 222

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M SMG  P+V T+  L+ G    G +  A+   + M   G  P+ I++N LI 
Sbjct: 223 ACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIR 282

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  G L  A   F+ MK   + PN  TY+TL++G+   G+ +    ++ EM  +G K 
Sbjct: 283 GLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKP 342

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y  +I  LCK+    +A  L+  +  ++  PN  T++ LI   C      RA  ++
Sbjct: 343 NVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVF 402

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M R+GC PN   +  L+    +  +   A  +++EML        +  + + + L   
Sbjct: 403 HGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQM 462

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
              + AM L  +M ++G+ P  F
Sbjct: 463 CMRKHAMLLLGRMMVQGIQPDAF 485



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 148/319 (46%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + L F  L K +    K  +A   +  M D G+ P   S N  +  L     +  AL
Sbjct: 235 CTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGAL 294

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+  M+RN + PN  T + ++  F   G ++ A+ ++  M+S G  P+V  Y  +I   
Sbjct: 295 DFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C K +   A    + M  +   PN +TFNTLI   C  G++  A  +F  M+     PN 
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYN L++G  + GN +   ++  EML NG ++ ++TYN +I  LC+    K A  L+  
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGR 474

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+A T++A+I   C       A  L   M    C  N   + +L+S  C    
Sbjct: 475 MMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK 534

Query: 489 FDRAAEVLLEMLEKCMAPD 507
              A   LL+ML + + P+
Sbjct: 535 LSNAMVYLLKMLYEGICPN 553



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 159/348 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +   ++ R A     +M   G  P + +    +    +  +V  AL  +  
Sbjct: 205 VTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHW 264

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     +P+  + N+++   C +G ++ A++ F +M+    +P+ TTY+TL+ G  N G 
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  AM   N M+ +G +PNV+ +  +I   CKK    +A  +  +M   N  PN VT+NT
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNT 384

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI      G      +++  M RNG   +  TYN L+ GL +EG  K A  +V ++  N 
Sbjct: 385 LIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNG 444

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
              +  TY+ +I   C     + A  L   M+  G +P+   F  ++  +C+      AA
Sbjct: 445 FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAA 504

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L +M       + +  + L S L + GK   AM    KM   G+ P
Sbjct: 505 CLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICP 552



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 149/317 (47%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P + +    + +   +  + +A      M     +PNV T   ++  F + G
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A+ ++  M   G+ PS  +YN LI G C  G L  A+ F N M++N + PN  T++
Sbjct: 254 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 313

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+ GF   G L  A  I++EMK++   PNVV Y  +I+   +    +   SL ++ML +
Sbjct: 314 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 373

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               + +T+N LI  LC  G+  +A  +   + +N   PN  TY+ L+ G     N + A
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F +   M+ +G   +   +  +++  CQ      A  +L  M+ + + PD+   + +   
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493

Query: 518 LHHCGKDELAMKLFRKM 534
               GK  +A  L  +M
Sbjct: 494 YCKEGKVSIAACLLGQM 510


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 6/311 (1%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I S N+ L+ L   E        YK+M    + P++ TLN++++  C +  I   +    
Sbjct: 91  IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMA 150

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            +   G+IP V T+ TLI G C +  +  A K    M+K G  PNV+T+ TLI G C  G
Sbjct: 151 GIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALG 210

Query: 348 KLHEANRIFSEM------KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            ++ A +   EM         N  PNV++Y+ +I+G  +VGN E    L+ EM+  G++ 
Sbjct: 211 NINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQP 270

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++T++ LI  LCKEG+  KA  L++ + +  +VPN  TY++LI G C+  +   A +L+
Sbjct: 271 NVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELF 330

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM   G  P+   + ML++ +C+    + A ++  EML   M PD      L   L   
Sbjct: 331 VSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLA 390

Query: 522 GKDELAMKLFR 532
           GK + A +LFR
Sbjct: 391 GKVDDAKELFR 401



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 174/389 (44%), Gaps = 41/389 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L K      +   AT  F +M+  G  P + +    +  L     ++IAL +++E
Sbjct: 162 VTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQE 221

Query: 254 MRRN------RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           M  +         PNV + ++++   CK+G  E A+ +F  M   G  P+V T++ LI  
Sbjct: 222 MLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDM 281

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C +G +  A K   +M + GI PN+ T+ +LI GFC  G L+ A  +F  M +    P+
Sbjct: 282 LCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPD 341

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL---------------- 411
           V++YN LINGY +    E    L+ EML  G+  D+ T   L+                 
Sbjct: 342 VISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR 401

Query: 412 -------------------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
                              GLCK G   +A  L  +L+  ++  +  T+  LI G C   
Sbjct: 402 VIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAG 461

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E A++L++ +   G +P+   +  ++  FC+    D+A  +  +M E   +PD I  S
Sbjct: 462 KLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYS 521

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  G +   K E  ++L  +M  + + P
Sbjct: 522 ILMRGFYESNKLEKVVQLLHRMIEKDVWP 550



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 155/346 (44%), Gaps = 6/346 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L    A  + +      + QM   G  P + + N  ++ L +  R++  L     + 
Sbjct: 94  FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIM 153

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P+V T   ++   C    I  A ++F  M+ +G  P+V TY TLI G C  G ++
Sbjct: 154 RRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNIN 213

Query: 316 LAMKFKNLMEKN------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +A+K+   M  +        +PNVI+++ +I G CK G   EA  +F+EM    V PNVV
Sbjct: 214 IALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVV 273

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T++ LI+   + G       L E M++ GI  ++ TY +LI G C  G    A  L   +
Sbjct: 274 TFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSM 333

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 P+  +Y+ LI G C     E A +L+  M+  G  P+     +L+         
Sbjct: 334 PSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKV 393

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           D A E+   +    M  D  I      GL   G    AMKLF ++E
Sbjct: 394 DDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELE 439



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 144/286 (50%), Gaps = 6/286 (2%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           ++++ N ++    K+    +   ++K M   G  P + T N LI+  CN   ++  +   
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             + + G  P+V+TF TLI G C + ++ EA ++F  M+    +PNVVTY TLI G   +
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209

Query: 382 GNSEMGASLYEEMLRN------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           GN  +    ++EML +        + ++++Y+ +I GLCK G  ++A  L  ++    + 
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T+S LI   C      +A +L + MI+ G  PN   +  L+  FC   D + A E+
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKEL 329

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + M  K   PD I  + L +G     K E AMKLF +M   G+ P
Sbjct: 330 FVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWP 375



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 9/332 (2%)

Query: 190 DSSPLVFD---------LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           D+SP VF+         ++         +  A   F +M D G  P + + +  +  L  
Sbjct: 225 DTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCK 284

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             +V  A    + M +  I PN++T   ++  FC +G +  A E+F +M S G+ P V +
Sbjct: 285 EGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVIS 344

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN LI+G+C    +  AMK  N M   G+ P+V T   L+      GK+ +A  +F  +K
Sbjct: 345 YNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK 404

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              +  ++      ++G  + G       L+ E+    +K+DI T+  LI GLCK GK +
Sbjct: 405 PYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLE 464

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  L + L +  + P+A  YS++I G C +   ++A  L++ M  +GC P+   + +LM
Sbjct: 465 TAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILM 524

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             F ++   ++  ++L  M+EK + PD  I +
Sbjct: 525 RGFYESNKLEKVVQLLHRMIEKDVWPDDGIYA 556



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 122/254 (48%), Gaps = 10/254 (3%)

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
           +PSK ++  + SY M          L   Y    K   A   F +M   G  P +++   
Sbjct: 333 MPSKGYEPDVISYNM----------LINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGV 382

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L +L  + +VD A   ++ ++   +  ++    + +   CK G I  A+++F  +ES  
Sbjct: 383 LLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYN 442

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
               + T+  LI G C  G L  A +    + + GIQP+ + ++++I GFCKKG++ +AN
Sbjct: 443 MKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKAN 502

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F +M+    SP+++TY+ L+ G+ +    E    L   M+   +  D   Y  +   +
Sbjct: 503 ILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMV 562

Query: 414 CKEGKTKKAAYLVK 427
           CK+ K K+   L++
Sbjct: 563 CKDEKYKEWLDLLQ 576



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 120/264 (45%), Gaps = 22/264 (8%)

Query: 309 CNKGLLSL--AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           C  G +S+  A +F +LM ++     + +FN L+ G  K     +   ++ +M    + P
Sbjct: 70  CKTGSISVTQAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +++T N LIN    V     G +    ++R G   D++T+  LI GLC E +  +A  L 
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS------GCRPNKHIFEMLM 480
             + K    PN  TY  LI G C   N   A + ++ M+         CRPN   + +++
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C+  +++ A  +  EM+++ + P+ +  S L   L   G+   A KL   M   G++
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 541 P---------KGFDKLRTINCAPE 555
           P         KGF  +  +N A E
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKE 328


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 163/319 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P + + N  + +L    ++D A+  ++EM     +P+V+T + +M+  CK   ++ A
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V +   M++ G +P+  T+N LI      G LS A K  + M   G  PN +T+NTLI G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C KGKL +A  +  +M ++   PN VTY T+ING  +   +E G  +   M   G K +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
              Y++LI GL KEGK++ A  L K++ +    PN   Y A I G C  +  + A  + +
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G  PN   +  LM  F +  D  +A  V  EM+ + M  + +  S L +GL   G
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +   A+ ++  M   GL P
Sbjct: 493 RLREALTVWTHMLGEGLKP 511



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 186/382 (48%), Gaps = 1/382 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           KS  S+L  I+    F    K +  +   + +    + L ++L+ K      +   A DT
Sbjct: 161 KSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDT 220

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M      P + + +  ++ L    RVD A+    EM+     PN  T N+++ A  K
Sbjct: 221 FREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSK 280

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G + RA ++  NM   G +P+  TYNTLI G C KG L  A+     M  +   PN +T
Sbjct: 281 NGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVT 340

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           + T+I G  K+ +  +   I   M+      N   Y++LI+G  + G SE    L++EM 
Sbjct: 341 YGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMA 400

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G K +++ Y A I GLC++ K  +A  +++++     +PNA TYS+L+ G   + +S+
Sbjct: 401 EKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQ 460

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           +A  ++K M+    R N     +L++  C++     A  V   ML + + PD +  S + 
Sbjct: 461 KAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMI 520

Query: 516 SGLHHCGKDELAMKLFRKMEIR 537
            GL   G  +  +KLF +M+ +
Sbjct: 521 KGLCDVGSVDKGLKLFYEMQCQ 542



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 179/396 (45%), Gaps = 56/396 (14%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG-------FLPIIESCNKFLSS 237
           SY++ D++   F  L + YA  ++F        +M+  G       F+ I ++C K   +
Sbjct: 84  SYKLGDAT---FYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGK---A 137

Query: 238 LLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNM---ESMG 293
            L  E    A+ F+  M  +      V + N V++   + G    A + + ++    S G
Sbjct: 138 HLPGE----AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKG 193

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           F P++ TYN +I   C  G +  A+     M      P+V T++TL+ G CK+ ++ EA 
Sbjct: 194 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 253

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM+A    PN VT+N LI+   + G+    A L + M   G   + +TYN LI GL
Sbjct: 254 FLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGL 313

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNAST--------------------------------- 440
           C +GK  KA  L++ +  +  VPN  T                                 
Sbjct: 314 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 373

Query: 441 --YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             YS+LI+G      SE A +L+K M   GC+PN  ++   +   C++E  D A ++L E
Sbjct: 374 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 433

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ML K   P++   S L  G    G  + A+ ++++M
Sbjct: 434 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 37/332 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +P+ F++L    +       A      M   G +P   + N  +  L    ++D AL
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M  ++  PN  T   +++   K    E  V +  +ME  G   +   Y++LISG 
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G    A++    M + G +PNV+ +   I G C+  K  EA  I  EM +    PN 
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEM---------------------------------- 394
            TY++L+ G+ + G+S+    +++EM                                  
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503

Query: 395 -LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD--KNSLVPNASTYSALITGQCVR 451
            L  G+K D++ Y+++I GLC  G   K   L  ++   +    P+  TY+ L    C +
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 563

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            N  RA  L  SM+  GC P+     + + T 
Sbjct: 564 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 595



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 11/287 (3%)

Query: 284 EVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++FK+    G +     T+  LI  +          +  + M++ G    V+T    I  
Sbjct: 74  QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILI 130

Query: 343 FCKKGKLH---EANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEML--- 395
           F   GK H   EA   F  M    +    V ++N+++N   Q G+       Y  +    
Sbjct: 131 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 190

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G + ++LTYN +I  LCK G+  +A    +++   +  P+  TYS L+ G C  +  +
Sbjct: 191 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 250

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   M   GC PN   F +L+    +N D  RAA+++  M  K   P+ +  + L 
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 310

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            GL   GK + A+ L  KM     +P        IN   +    E G
Sbjct: 311 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDG 357


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 22/436 (5%)

Query: 104 LTPFRVKHVL---LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           L PF    ++   ++ Q+   L   FF W  T + S  +  TH++V+ +L K+  F +  
Sbjct: 58  LAPFLSSEIVNDVMREQRRPELGFRFFIWT-TRRRSFRSWVTHNLVIDMLAKDDGFDTYW 116

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            IL  + +S+   +P                 P  F +L   YA       A ++F +M+
Sbjct: 117 KILEELKNSN-IQIP-----------------PPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D+G  P + + N  L  ++  E   +AL  Y +M +   +PN  T  ++++  CK G  +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++F  M   G  P+   Y  ++SG C         +  N M+ +G  P+ IT N L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK G++ EA  +    +       +  Y++LI+G  +    +       +M + GI+
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++ Y  LI G C+ G    A  ++ D+ +  L P+   Y+ALI G C     ++A  L
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              + ++ C P    + +L+   C+N   D A ++  +M     +P  +  + L  GL  
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 521 CGKDELAMKLFRKMEI 536
            G+ E A  LF KMEI
Sbjct: 459 AGELEEARHLFYKMEI 474



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/375 (23%), Positives = 151/375 (40%), Gaps = 42/375 (11%)

Query: 206 RKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           R K  +    +C +M   G  P +      +    +   VD AL    +M +  +SP+ Y
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             N ++  FC +G++++A  +   +      P+  TY  LI G C  GLL  A +  N M
Sbjct: 378 CYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN-------VSPNVVTYNTLING 377
           E  G  P+++TFN LI G CK G+L EA  +F +M+          +S          NG
Sbjct: 438 ENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANG 497

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV----------- 426
           + +V   E    + ++M++NG       Y  L+   C++GK   A  L            
Sbjct: 498 FHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQE 557

Query: 427 --------KDLDKNSLVPNA---------------STYSALITGQCVRKNSERAFQLYKS 463
                   +  +K  L                   + Y+  + G C  + SE A +++  
Sbjct: 558 DETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLV 617

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +       N     ML++  C++ + + A ++ L  LEK       I ++L   L    K
Sbjct: 618 LKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDK 677

Query: 524 DELAMKLFRKMEIRG 538
            + A+ L  +M   G
Sbjct: 678 MKHALDLLNRMNSAG 692



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T N +I    K        +I  E+K +N+     T++ LI  Y + G +E     + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G K D+ TYN+++  + ++     A  +   + K +  PN +T+  L+ G C    
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           ++ A +++  M + G  PN  I+ +++S  CQ +  D    +L  M      PDSI  + 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRG--LLPKGFDKL 547
           L  G    G+ + A  L +  E  G  L  KG+  L
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 179/397 (45%), Gaps = 79/397 (19%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           CQ  +Y +  +I+        L D++ V  AL  +  M+R+  SPNV     ++   CK 
Sbjct: 134 CQRNEYSYTILIQG-------LCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKS 186

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN---- 332
           G +  A  +F  M   G +PSV TYN +I G+   G ++ A+K K LMEKNG  P+    
Sbjct: 187 GRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTY 246

Query: 333 ------------------------------VITFNTLIFGFC------------------ 344
                                         V+TF  LI G+C                  
Sbjct: 247 NTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSS 306

Query: 345 -----------------KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                            KK +L EA  + +E+ A  + PNV+TY ++I+GY + G  ++ 
Sbjct: 307 KCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIA 366

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + + M R+G + +  TYN+L+ GL K+ K  KA  L+  + K+ ++PN  TY+ L+ G
Sbjct: 367 LEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQG 426

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           QC   + + AF+L++ M ++G +P++H + +L    C+     RA E    ++ K +A  
Sbjct: 427 QCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAEEAYSFIVRKGVALT 483

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +  + L  G    G  + A  L  +M   G  P  +
Sbjct: 484 KVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSY 520



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 171/353 (48%), Gaps = 1/353 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  ++   ++ A           + Q+   G LP   + N  + S      +  A  ++
Sbjct: 32  SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYF 91

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           + +    + P  +T N ++  +C+ G + +A  +F  M  MG   +  +Y  LI G C+ 
Sbjct: 92  RLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDA 151

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  A+    +M+++G  PNV  F  LI G CK G++ +A  +F  M    V P+V+TY
Sbjct: 152 KCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 211

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I GY ++G       + E M +NG   D  TYN LI GLC + KT++A  L+ +  K
Sbjct: 212 NAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVK 270

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               P   T++ LI G C+ +  + A ++   M+ S C+ +  +F  L+++  + +    
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKE 330

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           A E+L E+    + P+ I  + +  G    GK ++A+++ + ME  G  P  +
Sbjct: 331 AKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAW 383



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 182/374 (48%), Gaps = 5/374 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   ++ FD   ++ + ++ S   C     VF  L  +   + + + A +   ++ 
Sbjct: 282 NLINGYCMAEKFDDALRMKNKMMSS--KCKLDLQVFGKLINSLIKKDRLKEAKELLNEIS 339

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    +     S +VDIAL   K M R+   PN +T N +M+   K   + 
Sbjct: 340 ANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLH 399

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +   M+  G IP+V TY TL+ G C++     A +   +ME+NG++P+   +  L 
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLT 459

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G+  EA   +S +    V+   V Y TLI+G+ + GN++  A+L E M+  G  
Sbjct: 460 DALCKAGRAEEA---YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCT 516

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY+ L+  LCK+ +  +A  ++  +    +      Y+ LI         + A ++
Sbjct: 517 PDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRM 576

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y  M  SG +P+   + + ++++C+    + A +++L+M  + +APD +  + L  G  H
Sbjct: 577 YNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGH 636

Query: 521 CGKDELAMKLFRKM 534
            G  + A    ++M
Sbjct: 637 MGYIDRAFSTLKRM 650



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 3/279 (1%)

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  +SP  Y  N  + +  +  + E    V+  +   G +P   TYNT+I  +C +G L+
Sbjct: 28  RLALSPKCY--NFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLT 85

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A ++  L+ + G++P   T N L+ G+C+ G+L +A  +F  M       N  +Y  LI
Sbjct: 86  TAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILI 145

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G            L+  M R+G   ++  +  LI GLCK G+   A  L   + +N +V
Sbjct: 146 QGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVV 205

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+A+I G         A ++ + M ++GC P+   +  L+   C ++  + A E+
Sbjct: 206 PSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEEL 264

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L   +++   P  +  + L +G     K + A+++  KM
Sbjct: 265 LNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 152/359 (42%), Gaps = 55/359 (15%)

Query: 234 FLSSLLD----SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + ++L+D    +   D A    + M     +P+ YT ++++HA CK   +  A+ +   M
Sbjct: 486 YYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G   ++  Y  LI     +G    A +  N M  +G +P+  T+   I  +CK+G+L
Sbjct: 546 SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRL 605

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE---------MGAS----------- 389
            +A  +  +M+   V+P+VVTYN LI+G G +G  +         +GAS           
Sbjct: 606 EDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665

Query: 390 -------------------------------LYEEMLRNGIKVDILTYNALILGLCKEGK 418
                                          L E M+++G+   + TY++LI G CK G+
Sbjct: 666 LKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGR 725

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A  L+  +    L PN   Y+ LI   C  K  E+A      M   G +P    + +
Sbjct: 726 LEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRL 785

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           L+   C   DF++   +  ++LE     D +    L  GL   G  ++  ++   ME R
Sbjct: 786 LVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKR 844



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 159/397 (40%), Gaps = 21/397 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G   S   D+  ++    +     C  +   ++ L       KK   A     +M+
Sbjct: 352 SIIDGYCKSGKVDIALEVLK--MMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 409

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + +    L    D    D A   ++ M +N + P+ +   ++  A CK G   
Sbjct: 410 KDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG--- 466

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA E +  +   G   +   Y TLI G    G    A      M   G  P+  T++ L+
Sbjct: 467 RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLL 526

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK+ +L+EA  I  +M    +   +  Y  LI+   + G  +    +Y EM  +G K
Sbjct: 527 HALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHK 586

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TY   I   CKEG+ + A  L+  +++  + P+  TY+ LI G       +RAF  
Sbjct: 587 PSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFST 646

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE----------------DFDRAAEVLLEMLEKCM 504
            K M+ + C PN   + +L+    +                  + D   ++L  M++  +
Sbjct: 647 LKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 706

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P     S L +G    G+ E A  L   M  +GL P
Sbjct: 707 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSP 743



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 112/292 (38%), Gaps = 51/292 (17%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      + +L      +K+   A     QM   G    I +    +  +L   + D A 
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG- 307
             Y EM  +   P+  T  + ++++CK G +E A ++   ME  G  P V TYN LI G 
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 634

Query: 308 ---------------------------------HCNKG---------------LLSLAMK 319
                                            H  KG               L+ L + 
Sbjct: 635 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDIT 694

Query: 320 FKNL--MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           ++ L  M K+G+ P V T+++LI GFCK G+L EA  +   M    +SPN   Y  LI  
Sbjct: 695 WQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKC 754

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                  E   S    M   G +  + +Y  L++GLC EG  +K   L  DL
Sbjct: 755 CCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDL 806



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 133/342 (38%), Gaps = 38/342 (11%)

Query: 142 THSIVLHILTKNRKFKSSESIL-----RGI--------------LDSDSFDLPSKLFDSI 182
           T+S++LH L K ++   +  IL     RGI              L     D   ++++ +
Sbjct: 521 TYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
             S      S   + +   +Y    +  +A D   +M   G  P + + N  +       
Sbjct: 581 TSSGH--KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 638

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK--------------LGIIERAV--EVF 286
            +D A    K M      PN +T  +++    K                +IE  +  ++ 
Sbjct: 639 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 698

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M   G  P+VTTY++LI+G C  G L  A    + M   G+ PN   +  LI   C  
Sbjct: 699 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 758

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
               +A    S M      P + +Y  L+ G    G+ E   SL+ ++L  G   D + +
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 818

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
             L  GL K G       ++  ++K     ++ TY AL+T +
Sbjct: 819 KILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTY-ALVTNK 859


>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 495

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 209/445 (46%), Gaps = 32/445 (7%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI-----VLHILT 151
           LT  +   TP  V  V+ ++      +L+FF  +  H PS     THS       + I  
Sbjct: 60  LTKPTIQWTPDLVNKVMKRLWNHGPKALQFFKHLDRHHPSY----THSPSSFDHAVDIAA 115

Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           + R F S+ +++                   + S R+   SP    +L + YA   K   
Sbjct: 116 RMRDFNSAWALV-----------------GRMRSLRL-GPSPKTLAILAERYASNGKPHR 157

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A  TF  M ++G    + S N  L  L  S+RV+ A    K +  +R  P+  T N++ +
Sbjct: 158 AVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLT-SRFRPDTVTYNILAN 216

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +C +     A+ V K M   G  P++ TYNT++ G+     +  A +F   M+K   + 
Sbjct: 217 GYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEI 276

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V+T+ T+I GF   G + +A R+F EM    V PNV TYN LI    +  + E    ++
Sbjct: 277 DVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVF 336

Query: 392 EEMLRNGIKV-DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           EEM R G+ V +++TYN +I GLC  G  ++A   ++ + ++ L     TY+ +I   C 
Sbjct: 337 EEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCD 396

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC---QNEDFDRAAEVLLEMLEKCMAPD 507
               E+A +++  M    C PN   + +L+S      ++ED   A ++L++M+++   P 
Sbjct: 397 AGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPR 456

Query: 508 SIILSELYSGLHHCGKDELAMKLFR 532
               + + +GL   G  + A ++ R
Sbjct: 457 KFTFNRVLNGLVITGNQDFAKEILR 481



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 176/364 (48%), Gaps = 5/364 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  FD      A  + F +A     +MR     P  ++          + +   A+  +
Sbjct: 103 SPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTF 162

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             M  + I  ++++ N ++   CK   +E A  + K + S  F P   TYN L +G+C  
Sbjct: 163 LSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLI 221

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
               +A++    M + GI+P ++T+NT++ G+ +  ++ EA   + EMK      +VVTY
Sbjct: 222 KRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTY 281

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            T+I+G+G  G+ +    ++ EM++ G+  ++ TYNALI  LCK+   + A  + +++ +
Sbjct: 282 TTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVENAVVVFEEMAR 341

Query: 432 NSL-VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
             + VPN  TY+ +I G C   + ERA    + M   G R     + +++  FC   + +
Sbjct: 342 EGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVIRYFCDAGEVE 401

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAMKLFRKMEIRGLLPKGFDKL 547
           +A EV  +M +    P+    + L S +    K E   +A KL   M  RG LP+ F   
Sbjct: 402 KALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFN 461

Query: 548 RTIN 551
           R +N
Sbjct: 462 RVLN 465



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 94/216 (43%), Gaps = 4/216 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+   + +  +   +      + A   F +M   G +P + + N  +  L   + V+ 
Sbjct: 272 RKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVEN 331

Query: 247 ALGFYKEMRRNRIS-PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A+  ++EM R  +  PNV T N+V+   C +G +ERA+   + M   G    V TYN +I
Sbjct: 332 AVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVVI 391

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI---FGFCKKGKLHEANRIFSEMKAT 362
              C+ G +  A++    M      PN+ T+N LI   F   K   L  A ++  +M   
Sbjct: 392 RYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVDR 451

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
              P   T+N ++NG    GN +    +     R G
Sbjct: 452 GFLPRKFTFNRVLNGLVITGNQDFAKEILRMQSRCG 487


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 22/436 (5%)

Query: 104 LTPFRVKHVL---LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           L PF    ++   ++ Q+   L   FF W  T + S  +  TH++V+ +L K+  F +  
Sbjct: 58  LAPFLSSEIVNDVMREQRRPELGFRFFIWT-TRRRSFRSWVTHNLVIDMLAKDDGFDTYW 116

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            IL  + +S+   +P                 P  F +L   YA       A ++F +M+
Sbjct: 117 KILEELKNSN-IQIP-----------------PPTFSVLIAAYAKSGMAEKAVESFGKMK 158

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D+G  P + + N  L  ++  E   +AL  Y +M +   +PN  T  ++++  CK G  +
Sbjct: 159 DFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTD 218

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++F  M   G  P+   Y  ++SG C         +  N M+ +G  P+ IT N L+
Sbjct: 219 DALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALL 278

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFCK G++ EA  +    +       +  Y++LI+G  +    +       +M + GI+
Sbjct: 279 DGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIE 338

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D++ Y  LI G C+ G    A  ++ D+ +  L P+   Y+ALI G C     ++A  L
Sbjct: 339 PDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSL 398

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              + ++ C P    + +L+   C+N   D A ++  +M     +P  +  + L  GL  
Sbjct: 399 QLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCK 458

Query: 521 CGKDELAMKLFRKMEI 536
            G+ E A  LF KMEI
Sbjct: 459 AGELEEARHLFYKMEI 474



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 169/353 (47%), Gaps = 14/353 (3%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G++  I+  +  +  L  ++R D    + ++M +  I P+V    +++  FC++G+++ A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + +  +M   G  P    YN LI G C+ GLL  A   +  + KN   P   T+  LI G
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM-------- 394
            C+ G L EA +IF++M+    SP+++T+N LI+G  + G  E    L+ +M        
Sbjct: 421 MCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSL 480

Query: 395 ---LRNGIK--VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
              L  G    +D  +   ++  LC+ G   KA  L+  L  + +VP+  TY+ LI G C
Sbjct: 481 FLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFC 540

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             KN   AF+L++ +   G  P+   +  L+  F + +  + A  VL +M++    P S 
Sbjct: 541 KAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSA 600

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +   L +     GK  +A  L+ K  +R L  +  + L+      E GE E  
Sbjct: 601 VYKCLMTWSCRKGKLSVAFSLWLKY-LRSLPSQEDETLKLAEEHFEKGELEKA 652



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 159/379 (41%), Gaps = 58/379 (15%)

Query: 206 RKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           R K  +    +C +M   G  P +      +    +   VD AL    +M +  +SP+ Y
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             N ++  FC +G++++A  +   +      P+  TY  LI G C  GLL  A +  N M
Sbjct: 378 CYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA----------------------- 361
           E  G  P+++TFN LI G CK G+L EA  +F +M+                        
Sbjct: 438 ENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASL 497

Query: 362 -------------------------TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                                    + V P+++TYN LING+ +  N      L+ E+  
Sbjct: 498 QTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQL 557

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   D +TY  LI G  +  + + A  ++  + KN   P+++ Y  L+T  C +     
Sbjct: 558 KGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSV 617

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC----MAPDSIILS 512
           AF L+   +RS         ++    F + E  ++A   LLEM  K     +AP +I L 
Sbjct: 618 AFSLWLKYLRSLPSQEDETLKLAEEHFEKGE-LEKAVRCLLEMNFKLNNFEIAPYTIWL- 675

Query: 513 ELYSGLHHCGKDELAMKLF 531
               GL    + E A+K+F
Sbjct: 676 ---IGLCQARRSEEALKIF 691



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/427 (21%), Positives = 166/427 (38%), Gaps = 82/427 (19%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L + +        A +    M   G  P     N  +    D   +D A     E
Sbjct: 342 VLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLE 401

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +N   P   T  +++   C+ G+++ A ++F  ME++G  PS+ T+N LI G C  G 
Sbjct: 402 ISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGE 461

Query: 314 LSLAM----------------------------------------------KFKNLME-- 325
           L  A                                                +K LM+  
Sbjct: 462 LEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLA 521

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
            +G+ P+++T+N LI GFCK   ++ A ++F E++    SP+ VTY TLI+G+ +V   E
Sbjct: 522 DSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREE 581

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV------------------- 426
               + ++M++NG       Y  L+   C++GK   A  L                    
Sbjct: 582 DAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAE 641

Query: 427 KDLDKNSLVPNA---------------STYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           +  +K  L                   + Y+  + G C  + SE A +++  +       
Sbjct: 642 EHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDV 701

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N     ML++  C++ + + A ++ L  LEK       I ++L   L    K + A+ L 
Sbjct: 702 NPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLL 761

Query: 532 RKMEIRG 538
            +M   G
Sbjct: 762 NRMNSAG 768



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 2/216 (0%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T N +I    K        +I  E+K +N+     T++ LI  Y + G +E     + +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G K D+ TYN+++  + ++     A  +   + K +  PN +T+  L+ G C    
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           ++ A +++  M + G  PN  I+ +++S  CQ +  D    +L  M      PDSI  + 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRG--LLPKGFDKL 547
           L  G    G+ + A  L +  E  G  L  KG+  L
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 203/433 (46%), Gaps = 21/433 (4%)

Query: 129 WVQT--HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
           W Q    K SSL    +  +++   +      +E+++R  ++ +  D P  ++ +++  Y
Sbjct: 403 WFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVRE-MEEEGIDAPIDIYHTMMDGY 461

Query: 187 RM----------------CDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
            M                C  +P V  +  L   YA   K   A +   +M   G    +
Sbjct: 462 TMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNM 521

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           ++ +  ++  L  +    A   ++++ ++ I P+V   N ++ AFC +G ++RAV   K 
Sbjct: 522 KTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKE 581

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+     P+  T+  +I G   KG +  A+   ++M  +G  P V T+N LI G  +K K
Sbjct: 582 MQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRK 641

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A +I  EM    VSPN  TY T+++GY  +G++    + + ++   G+++D+ TY A
Sbjct: 642 MEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEA 701

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+   CK G+ + A  + K++   ++  N   Y+ LI G   R +   A  L + M R G
Sbjct: 702 LLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREG 761

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            +P+ H +   ++   +  D  RA + + EM    + P+    + L +G       E A+
Sbjct: 762 VQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKAL 821

Query: 529 KLFRKMEIRGLLP 541
             F +M++ GL P
Sbjct: 822 SCFEEMKLSGLKP 834



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 147/323 (45%), Gaps = 35/323 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +   K + NA   F  +   G  P +   N  +++     ++D A+   KEM+
Sbjct: 524 YSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQ 583

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R  P   T   ++H F + G +++A++VF  M   G IP+V TYN LI G   K  + 
Sbjct: 584 KQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKME 643

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGF-------------------------------- 343
            A +  + M   G+ PN  T+ T++ G+                                
Sbjct: 644 KAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALL 703

Query: 344 ---CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G++  A  +  EM A N+  N   YN LI+G+ + G+    A L ++M R G++
Sbjct: 704 KACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQ 763

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI TY + I    K G  ++A   ++++    + PN  TY+ LI G       E+A   
Sbjct: 764 PDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSC 823

Query: 461 YKSMIRSGCRPNKHIFEMLMSTF 483
           ++ M  SG +P++ ++  LM++ 
Sbjct: 824 FEEMKLSGLKPDRAVYHCLMTSL 846



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/353 (23%), Positives = 166/353 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + S  V+  L   YA  +    A     +M++ G    + + +  +S    +   + 
Sbjct: 340 RGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAES 399

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  +++E +    S N      +++A+C+   +++A  + + ME  G    +  Y+T++ 
Sbjct: 400 ADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMD 459

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+   G     +      ++ G+ P+VIT+  LI  + K GK+ +A  +  EM+   +  
Sbjct: 460 GYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKH 519

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+ TY+ LING+ ++ +     +++E+++++GIK D++ YN +I   C  GK  +A   V
Sbjct: 520 NMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTV 579

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++ K    P   T+  +I G   +   ++A  ++  M  SGC P  H +  L+    + 
Sbjct: 580 KEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEK 639

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              ++A ++L EM    ++P+    + +  G    G    A   F K+   GL
Sbjct: 640 RKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGL 692



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 173/368 (47%), Gaps = 2/368 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + +++  +   Y  R     A     +M + G    I+  +  +         D  L  +
Sbjct: 415 NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVF 474

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN- 310
           +  +   ++P+V T   +++ + KLG + +A+EV K ME  G   ++ TY+ LI+G    
Sbjct: 475 ERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKL 534

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           K   +    F++L+ K+GI+P+V+ +N +I  FC  GK+  A     EM+     P   T
Sbjct: 535 KDWANAFAIFEDLI-KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRT 593

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           +  +I+G+ + G  +    +++ M  +G    + TYNALILGL ++ K +KA  ++ ++ 
Sbjct: 594 FMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMT 653

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              + PN  TY+ ++ G     ++ +AF  +  +   G + + + +E L+   C++    
Sbjct: 654 LAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQ 713

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A  V  EM  + +  ++ I + L  G    G    A  L ++M+  G+ P        I
Sbjct: 714 SALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFI 773

Query: 551 NCAPENGE 558
           N   + G+
Sbjct: 774 NACSKAGD 781



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/316 (24%), Positives = 136/316 (43%), Gaps = 35/316 (11%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+     ++++ + + G + RA E F+ M + G  PS   Y  LI  +     +  A+  
Sbjct: 309 PSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSC 368

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M++ GI+ +++T++ L+ GF K G    A+  F E K  + S N + Y  +I  Y Q
Sbjct: 369 VRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQ 428

Query: 381 VGNSEMGASLYEEMLRNGIKVDI-----------------------------------LT 405
             N +   +L  EM   GI   I                                   +T
Sbjct: 429 RCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVIT 488

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI    K GK  KA  + K+++   +  N  TYS LI G    K+   AF +++ +I
Sbjct: 489 YGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLI 548

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G +P+  ++  +++ FC     DRA   + EM ++   P +     +  G    G+ +
Sbjct: 549 KDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMK 608

Query: 526 LAMKLFRKMEIRGLLP 541
            A+ +F  M + G +P
Sbjct: 609 KALDVFDMMRMSGCIP 624



 Score = 78.6 bits (192), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 100/214 (46%), Gaps = 8/214 (3%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   +  ++  + ++G +H A   F +M+A  + P+   Y  LI+ Y    + E   S
Sbjct: 308 KPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALS 367

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
              +M   GI++ ++TY+ L+ G  K G  + A +  ++  +     NA  Y  +I   C
Sbjct: 368 CVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYC 427

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R N ++A  L + M   G      I+  +M  +    D D+   ++ E  ++C    S+
Sbjct: 428 QRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCL-LVFERFKECGLNPSV 486

Query: 510 I----LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           I    L  LY+ L   GK   A+++ ++ME  G+
Sbjct: 487 ITYGCLINLYAKL---GKVSKALEVSKEMEHAGI 517


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 159/320 (49%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P + S N  L  L  ++R        +EM R    PNV T N ++   C+ G+ ER
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFER 278

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             +V   M   G  P +  Y T++ G C +G L +A +  + M   G++PNV+ +NT++ 
Sbjct: 279 VHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLK 338

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  +A  + +EM   +   + VT+N L++ + Q G       L E+ML +G   
Sbjct: 339 GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP 398

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TY  +I G CKEG   +A  L+K +      PN  +Y+ ++ G C  +    A  L 
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             MI  GC PN   F  +++  C+    ++A E+L +ML    +PD I  S +  GL   
Sbjct: 459 SQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKA 518

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK + A++L   M  +G+ P
Sbjct: 519 GKTDEALELLNVMVNKGMSP 538



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 162/329 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  YG  P +   N  L  L  +ER + A     EM  N    +  T N+++  FC+ G
Sbjct: 320 RMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNG 379

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           ++ R +E+ + M   G +P V TY T+I+G C +GL+  A+     M   G +PN I++ 
Sbjct: 380 LVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYT 439

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            ++ G C   +  +A  + S+M     SPN VT+NT+IN   + G  E    L ++ML N
Sbjct: 440 IVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+++Y+ +I GL K GKT +A  L+  +    + PN   YS++ +         R 
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            Q++ ++     R +  ++  ++S+ C+    DRA E L  M+     P+    + L  G
Sbjct: 560 IQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           L   G  + A ++  ++  +G L K F K
Sbjct: 620 LASEGFVKEAQEMLTELCSKGALRKHFMK 648



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 149/325 (45%), Gaps = 12/325 (3%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK---LGI 278
           Y + P++ +       L    R+  AL    EMRR   +P     ++++ A C     G 
Sbjct: 116 YTYFPVVRA-------LCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGG 168

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLSLAMKF-KNLMEKNGIQPNVITF 336
              AV V +++   G    V   N +++  C++G  +  A++  ++L    G  P+V+++
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N ++ G C   +      +  EM      PNVVT+NTLI    + G  E    +  +M+ 
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           +G   DI  Y  ++ G+CKEG  + A  ++  +    L PN   Y+ ++ G C  +  E+
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +L   M  + C  +   F +L+  FCQN    R  E+L +MLE    PD I  + + +
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           G    G  + A+ L + M   G  P
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRP 433



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 120/250 (48%), Gaps = 16/250 (6%)

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN ++SG+C  G L+ A   + L     + PN  T+  ++   C +G++ +A  +  EM+
Sbjct: 86  YNAMVSGYCRAGQLASA---RRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR-------NGIKVDILTYNALILGL 413
               +P    Y+ ++    +   S  G   +   +R        G  +D+   N ++  +
Sbjct: 143 RRGCAPIPPMYHVIL----EAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAV 198

Query: 414 CKEGKT-KKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           C +G +  +A  L++DL  +    P+  +Y+A++ G C+ K   R   L + M+R GC P
Sbjct: 199 CDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPP 258

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   F  L+   C+N  F+R  +VL +M++    PD  + + +  G+   G  E+A ++ 
Sbjct: 259 NVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEIL 318

Query: 532 RKMEIRGLLP 541
            +M   GL P
Sbjct: 319 DRMPSYGLKP 328



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 111/308 (36%), Gaps = 52/308 (16%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSD------SFDLPSKLFDSILYSYRM-------- 188
           ++ VL  L    +++ +E +L  + D+D      +F++    F      YR+        
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 189 ---CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
              C    + +  +   +        A      M   G  P   S    L  L  +ER  
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A     +M     SPN  T N V++  CK G++E+A+E+ K M   G  P + +Y+T+I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITF----------------------------- 336
            G    G    A++  N+M   G+ PN I +                             
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572

Query: 337 ------NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
                 N +I   CK+G    A    + M ++   PN  TY  LI G    G  +    +
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEM 632

Query: 391 YEEMLRNG 398
             E+   G
Sbjct: 633 LTELCSKG 640


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 177/400 (44%), Gaps = 38/400 (9%)

Query: 180  DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLS 236
            D  L S  +  ++P       L   YA       AT+   ++R+ YG LP +  CN+ L 
Sbjct: 892  DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLK 951

Query: 237  SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
             L++  R D A   Y EM       + Y+  +++   C    +E  +++ +     G IP
Sbjct: 952  LLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIP 1011

Query: 297  SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
             V  YN LI G+C +G +   +     ME NG  P ++T+ +LI    KKG L +   +F
Sbjct: 1012 HVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLF 1071

Query: 357  SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             EM+    SPNV  YN++I+      ++     + ++M  +G   DI+T+N LI GLC E
Sbjct: 1072 LEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 1131

Query: 417  GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------- 468
            G  +KA + +++  +  L PN  +Y+ LI G C+R     A  L   M+  G        
Sbjct: 1132 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTF 1191

Query: 469  ---------------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
                                         P+ +I+ +L+S  C+      A  +L EMLE
Sbjct: 1192 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1251

Query: 502  KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            K + PD  + + L  G         A K+F  ME +G+ P
Sbjct: 1252 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCP 1291



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 148/312 (47%), Gaps = 3/312 (0%)

Query: 210  RNATDTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            R+AT       QM   G  P I + N  ++ L     V  A  F +E  R  ++PN  + 
Sbjct: 1097 RSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSY 1156

Query: 267  NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
              ++H FC  G +  A ++   M   G  P V T+  LI G    G +S A+  +  M +
Sbjct: 1157 TPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTE 1216

Query: 327  NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              + P+V  +N LI G CKK  L  A  I  EM   NV P+   Y TLI+G+ +  N   
Sbjct: 1217 RQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGD 1276

Query: 387  GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
               ++E M   G+  DI++ NA+I G C+ G   +A   + ++ K   +P+  TY+ +I+
Sbjct: 1277 ARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVIS 1336

Query: 447  GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
            G   + N   A +    MI+  C+PN   +  L++ +C+  D D A  +   M  + ++P
Sbjct: 1337 GYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSP 1396

Query: 507  DSIILSELYSGL 518
            + +  + L   L
Sbjct: 1397 NVVTYTILIGSL 1408



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 155/328 (47%), Gaps = 4/328 (1%)

Query: 234  FLSSLLDS--ERVDIALGFY--KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
            F + L+D    R D+  G     EM  N   P + T   +++   K G +E+   +F  M
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074

Query: 290  ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
               GF P+V  YN++I   CN    + AM     M  +G  P++ITFNTLI G C +G +
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134

Query: 350  HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             +A     E     ++PN ++Y  LI+G+   G   + + L  EM+  G   D++T+ AL
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194

Query: 410  ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
            I GL   GK  +A  + + + +  + P+ + Y+ LI+G C ++    A  + + M+    
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254

Query: 470  RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            +P++ ++  L+  F ++E+   A ++   M  K + PD +  + +  G    G    A+ 
Sbjct: 1255 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAIL 1314

Query: 530  LFRKMEIRGLLPKGFDKLRTINCAPENG 557
                M   G +P  F     I+   + G
Sbjct: 1315 CMSNMRKVGCIPDEFTYTTVISGYAKQG 1342



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 171/388 (44%), Gaps = 35/388 (9%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            C    + +++L   Y  R           +M   GFLP + +    ++ L     ++   
Sbjct: 1009 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIG 1068

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + EMR+   SPNV   N V+ A C      +A+ + K M + G  P + T+NTLI+G 
Sbjct: 1069 SLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1128

Query: 309  CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
            C++G +  A  F     +  + PN +++  LI GFC +G+L  A+ +  EM     +P+V
Sbjct: 1129 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1188

Query: 369  VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            VT+  LI+G    G       + E+M    +  D+  YN LI GLCK+     A  ++++
Sbjct: 1189 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1248

Query: 429  LDKNSLVPNASTYSALITGQCVRKNSERAFQLYK-------------------------- 462
            + + ++ P+   Y+ LI G    +N   A ++++                          
Sbjct: 1249 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGM 1308

Query: 463  ---------SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
                     +M + GC P++  +  ++S + +  + + A   L +M+++   P+ +  S 
Sbjct: 1309 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 1368

Query: 514  LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L +G    G  + A  LF  M+   L P
Sbjct: 1369 LINGYCKTGDTDSAEGLFANMQAEALSP 1396



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 142/334 (42%), Gaps = 2/334 (0%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            CD   + F+ L     H    R A     +       P   S    +        + +A 
Sbjct: 1114 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1173

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                EM     +P+V T   ++H     G +  A+ V + M      P V  YN LISG 
Sbjct: 1174 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1233

Query: 309  CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C K +L  A    + ++EKN +QP+   + TLI GF +   L +A +IF  M+   V P+
Sbjct: 1234 CKKRMLPAAKNILEEMLEKN-VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPD 1292

Query: 368  VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            +V+ N +I GY Q G           M + G   D  TY  +I G  K+G    A   + 
Sbjct: 1293 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1352

Query: 428  DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            D+ K    PN  TYS+LI G C   +++ A  L+ +M      PN   + +L+ +  + +
Sbjct: 1353 DMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKD 1412

Query: 488  DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
               RA      ML    +P+ + L  L +GL  C
Sbjct: 1413 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1446



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 135/286 (47%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R  + + L +  L   +  R +   A+D   +M   G  P + +    +  L+ + +V  
Sbjct: 1147 RELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSE 1206

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            AL   ++M   ++ P+V   N+++   CK  ++  A  + + M      P    Y TLI 
Sbjct: 1207 ALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLID 1266

Query: 307  GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            G      L  A K    ME  G+ P++++ N +I G+C+ G + EA    S M+     P
Sbjct: 1267 GFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 1326

Query: 367  NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +  TY T+I+GY + GN         +M++   K +++TY++LI G CK G T  A  L 
Sbjct: 1327 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLF 1386

Query: 427  KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             ++   +L PN  TY+ LI     +    RA   +++M+ + C PN
Sbjct: 1387 ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1432



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 15/305 (4%)

Query: 195  VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            ++++L      ++    A +   +M +    P        +   + SE +  A   ++ M
Sbjct: 1225 IYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 1284

Query: 255  RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                + P++ + N ++  +C+ G++  A+    NM  +G IP   TY T+ISG+  +G L
Sbjct: 1285 EHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1344

Query: 315  SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            + A+++   M K   +PNV+T+++LI G+CK G    A  +F+ M+A  +SPNVVTY  L
Sbjct: 1345 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 1404

Query: 375  INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL------------CKEGKTK-K 421
            I    +          +E ML N    + +T + L+ GL            C   +   K
Sbjct: 1405 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 1464

Query: 422  AAYLV--KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A LV  K L  +   P  S Y+A+I   C       A      M + G  PN   F  L
Sbjct: 1465 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 1524

Query: 480  MSTFC 484
            +  FC
Sbjct: 1525 LYGFC 1529



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 76/177 (42%), Gaps = 15/177 (8%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R C  + + +  L   Y       +A   F  M+     P + +    + SL   ++V  
Sbjct: 1357 RKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 1416

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAF--CKLGII-------------ERAVEVFKNMES 291
            A  +++ M  N  SPN  TL+ +++    C   +I             +  + VFK +  
Sbjct: 1417 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 1476

Query: 292  MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
                P  + YN +I   C   +L  A+ FKN M K G  PN ITF +L++GFC  GK
Sbjct: 1477 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1533



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 118/312 (37%), Gaps = 73/312 (23%)

Query: 143  HSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
            +++++  L K R   ++++IL  +L+     D F + + L D  + S  + D+   +F+ 
Sbjct: 1226 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF-VYATLIDGFIRSENLGDARK-IFEF 1283

Query: 199  L---------------FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +                K Y        A      MR  G +P   +    +S       
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1343

Query: 244  VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            ++ AL +  +M + +  PNV T + +++ +CK G  + A  +F NM++    P+V TY  
Sbjct: 1344 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 1403

Query: 304  LISG--------------------HCN----------KGLLS------------------ 315
            LI                      HC+           GL S                  
Sbjct: 1404 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1463

Query: 316  ---LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
               L + FK L+   G  P    +N +IF  C+   L EA    + M      PN +T+ 
Sbjct: 1464 KDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1522

Query: 373  TLINGYGQVGNS 384
            +L+ G+  VG S
Sbjct: 1523 SLLYGFCSVGKS 1534


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 173/335 (51%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           + D +   + +L + Y+   K   A   F +M   G  P +      ++       +  A
Sbjct: 253 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 312

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM   R+ PN YT   +++  CK G ++ A  +  +M+S G   +   +NTL+ G
Sbjct: 313 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 372

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C KG++  A++ +N+M++ G + +  T N +  GFC+  +  EA R+   M+   V+PN
Sbjct: 373 YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 432

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VV+++ LI+ Y +  N      L++ M + G    ++TYNA I   CK+GK ++A  L+ 
Sbjct: 433 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 492

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ +  L+P+  TY++LI G+    N +RA +L+  M + G   N   + +++S   ++ 
Sbjct: 493 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 552

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
             D A ++  EM ++ + PD  I S L + LH  G
Sbjct: 553 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 210/478 (43%), Gaps = 41/478 (8%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL-DSDSFDLPSKLFDSI 182
           L FF +++ +      L  H I+   L + RKF   +++L+ I+ D + +    ++  SI
Sbjct: 48  LRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSI 107

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
              +          D+LF+ Y   + F ++ + F   R  GF     SC +FL +L  S 
Sbjct: 108 GGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 167

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +++ + F ++M  + I   V +   V+   CK G + RA  +   +   GF PSV TYN
Sbjct: 168 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 227

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKN----------------------------------- 327
           TL++G+     +    +  +LMEKN                                   
Sbjct: 228 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 287

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+P+V  + ++I   CK G +  A  +F EM    + PN  TY  LING  + G  +  
Sbjct: 288 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 347

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +  +M   G+ V+ + +N L+ G CK+G   +A  L   + +     +A T + + +G
Sbjct: 348 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 407

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     E A +L  +M   G  PN   F +L+  +C+ ++F  A  +   M +K  AP 
Sbjct: 408 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPS 467

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
            +  +         GK E A KL  +M+ RGL+P  +     I     +GE+ SG + 
Sbjct: 468 VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI-----DGERASGNVD 520



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 68/154 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L   Y   + F  A   F  M   G  P + + N F+       +++ A     EM+
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ YT   ++      G ++RA+E+F  M  +G   +V TY  +ISG    G   
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 555

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            A K  + M K GI P+   +++LI    K G L
Sbjct: 556 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 164/349 (46%), Gaps = 10/349 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F+ L          R  T+ F  MRD    P + +    L+ L  S  V  AL     M
Sbjct: 133 IFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRM 192

Query: 255 RR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM----GFIPSVTTYNTLISGH 308
               + + P++  LN V+   CK+G +++A+ +F + E M    G  P+  TYN L    
Sbjct: 193 SSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVD-ERMRHVHGCAPNAVTYNCLADAF 250

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT--NVSP 366
           C  G + +A K    MEK G+ PNVIT NT+I G C+ G++  A   F E +        
Sbjct: 251 CRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG 310

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N VTY+TL + +    N +M   L+ EM  +G + D + Y  +I GL + G+   A    
Sbjct: 311 NAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTA 370

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + K     +A  Y+ LI G C +K    A++L + M   G +P+ + +  L+S  C+ 
Sbjct: 371 ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKA 430

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            DF    E+L  M++    P  +    L  G    GK + A+++FR M+
Sbjct: 431 GDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMD 479



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 2/339 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   +        A     +M   G  P + + N  +  L    RV  AL
Sbjct: 236 CAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAAL 295

Query: 249 GFYKEMRR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            F++E R        N  T + +  AF     ++ A+E+F  M   G  P    Y T+IS
Sbjct: 296 EFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMIS 355

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G L  A      M+K G + +   +N LI GFC+K KLHEA  +  EMK   + P
Sbjct: 356 GLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQP 415

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V TYNTL++G  + G+      L   M+ +G +  ++T+  L+ G CK GKT +A  + 
Sbjct: 416 DVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIF 475

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +D+  + PN   Y+ LI   C  +  + A +L+  M       N   +  L+      
Sbjct: 476 RSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDK 535

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           +  ++A E++  M E+   P+ + +  L   L   G+ E
Sbjct: 536 KMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 152/324 (46%), Gaps = 12/324 (3%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-----ESMGFIPSV 298
           + +A      M +  ++PNV T+N ++   C++G +  A+E F+       E+ G   + 
Sbjct: 256 IGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARG---NA 312

Query: 299 TTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            TY+TL S   HCN   + +AM+  + M  +G +P+ + + T+I G  + G+L +A    
Sbjct: 313 VTYSTLASAFLHCNN--VDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTA 370

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + MK      +   YN LI G+ +         L EEM   G++ D+ TYN L+ GLCK 
Sbjct: 371 ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKA 430

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G       L+  +  +   P+  T+  L+ G C    ++ A ++++SM  +  +PN  I+
Sbjct: 431 GDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIY 490

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+   C++ + D A ++  EM EK +  +    + L  GL      E A +L  +M  
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMRE 550

Query: 537 RGLLPKGFDKLRTINCAPENGEKE 560
               P        +   PE GE E
Sbjct: 551 ERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 146/307 (47%), Gaps = 17/307 (5%)

Query: 247 ALGFYKE-MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A GF ++ +     +P++   N ++ A  + G +    E+F +M      P V TY  L+
Sbjct: 114 AAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILL 173

Query: 306 SGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +G C  G +  A+K  + M   G  + P++   NT++ G CK G+L +A  IF + +  +
Sbjct: 174 NGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAI-IFVDERMRH 232

Query: 364 V---SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           V   +PN VTYN L + + +VG+  M   +   M + G+  +++T N +I GLC+ G+  
Sbjct: 233 VHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVG 292

Query: 421 KAAYLVKDLDKNSLVP----NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            A    +  +K ++ P    NA TYS L +      N + A +L+  M   G RP+  ++
Sbjct: 293 AALEFFR--EKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMY 350

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
             ++S   Q      A      M +     D+   + L  G   C K +L  A +L  +M
Sbjct: 351 FTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGF--CRKKKLHEAYELLEEM 408

Query: 535 EIRGLLP 541
           +  GL P
Sbjct: 409 KGVGLQP 415



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 108/224 (48%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A  T   M+  GF    ++ N  +      +++  A    +EM+   + P+VYT N
Sbjct: 362 RLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYN 421

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G      E+  +M   G  PSV T+ TL+ G+C  G    A++    M++ 
Sbjct: 422 TLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEA 481

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            IQPN + +NTLI   CK  ++  A ++F EM+  NV  NV TYN L+ G      +E  
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKA 541

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L + M       + +T + L+  L + G+T++    ++  D+
Sbjct: 542 FELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFMQQRDQ 585


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDI 246
           C  +   +++L K      + + A +    M D G    P + S    ++       +D 
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G Y EM    I PNV T + ++ A CK   +++A+EV  +M   G +P+  TYN+++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA ++F  M    + P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TY TL+ GY   G       L + M+RNGI  +   ++ LI    K+GK  +A  + 
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L P+  TY  +I   C     E A + ++ MI     P   ++  L+ + C  
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + +D+A E++LEML++ +  D+I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKP 512



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+GF K+M  + + P+V T N +M 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ LI  + K+GK+ +A  +FS+M+   ++P+ VTY T+I    + G  E     +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+   +    + YN+LI  LC   K  KA  L+ ++    +  +   ++++I   C  
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+  +C     D A ++L  M+   M PD +  
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + E A+ LFR+ME  G+ P
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+SP     N ++H+ C     ++A E+   M   G       +N++I  HC +G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT++TLI G+C  GK+ EA ++ + M +  + P+ VTYNTL
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 676 LFAALSANGLVPD 688



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++P+  T   V+   CK G +E A+  F+ M      P    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI   C       A +    M   GI  + I FN++I   CK+G++ E+ ++F  M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+++TY+TLI+GY   G  +    L   M+  G+K D +TYN LI G CK  + + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L ++++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +   GL+P 
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP- 687

Query: 543 GFDKLRTINCAPEN 556
               +RT +   EN
Sbjct: 688 ---DVRTYSLMAEN 698



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++ Y  +M D   SP  +V++ L  +     K+  A +   +M D G  L  I  
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-- 480

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + P++ T + ++  +C  G ++ A ++ 
Sbjct: 481 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TYNTLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I  L K G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +GC  N  +   ++    Q  D  RA   L  + EK
Sbjct: 718 NGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 18/304 (5%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIER-----AVEVFKNMESMG---FIPSVTTY 301
           F + +RR R   ++Y LN      C L  + R     AV  +  M   G     P++ TY
Sbjct: 42  FDELLRRGR-GASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMK 360
             LI   C  G L L       + K G + + I F  L+ G C   +  +A + +   M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGK 418
                PNV +YN L+ G      S+    L + M  +G     D+++Y  +I G  KEG 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA     ++    ++PN  TYS++I   C  +  ++A ++  SM+++G  PN   +  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  +C +     A   L +M    + PD +  + L   L   G+   A K+F  M  RG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 539 LLPK 542
           L P+
Sbjct: 335 LKPE 338



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 135/314 (42%), Gaps = 22/314 (7%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y    K   AT     M   G  P   + N  ++      R++ AL  ++E
Sbjct: 515 ITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFRE 574

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ G C   L
Sbjct: 575 MESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNL 634

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
              A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A  + P+V TY+
Sbjct: 635 TDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYS 693

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            +     + G  E    L+  M  NG   +    N+++  L + G   +A   +  +D+ 
Sbjct: 694 LMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753

Query: 433 SLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE-- 487
                AST S    L++G          +Q Y S IR G      IF + +++  Q    
Sbjct: 754 HFSLEASTASLFLDLLSGG--------KYQEYHSCIRGG------IFSLCVNSEVQENHL 799

Query: 488 -DFDRAAEVLLEML 500
            D +     LL++L
Sbjct: 800 LDSESGVHFLLKLL 813


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 173/335 (51%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           + D +   + +L + Y+   K   A   F +M   G  P +      ++       +  A
Sbjct: 257 VVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRA 316

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              + EM   R+ PN YT   +++  CK G ++ A  +  +M+S G   +   +NTL+ G
Sbjct: 317 FVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDG 376

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C KG++  A++ +N+M++ G + +  T N +  GFC+  +  EA R+   M+   V+PN
Sbjct: 377 YCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPN 436

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VV+++ LI+ Y +  N      L++ M + G    ++TYNA I   CK+GK ++A  L+ 
Sbjct: 437 VVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLIN 496

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ +  L+P+  TY++LI G+    N +RA +L+  M + G   N   + +++S   ++ 
Sbjct: 497 EMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDG 556

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
             D A ++  EM ++ + PD  I S L + LH  G
Sbjct: 557 RADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 210/478 (43%), Gaps = 41/478 (8%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL-DSDSFDLPSKLFDSI 182
           L FF +++ +      L  H I+   L + RKF   +++L+ I+ D + +    ++  SI
Sbjct: 52  LRFFDFLRQNPSRKPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNLWSNVERIVSSI 111

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
              +          D+LF+ Y   + F ++ + F   R  GF     SC +FL +L  S 
Sbjct: 112 GGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSG 171

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +++ + F ++M  + I   V +   V+   CK G + RA  +   +   GF PSV TYN
Sbjct: 172 NMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYN 231

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKN----------------------------------- 327
           TL++G+     +    +  +LMEKN                                   
Sbjct: 232 TLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 291

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI+P+V  + ++I   CK G +  A  +F EM    + PN  TY  LING  + G  +  
Sbjct: 292 GIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAA 351

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             +  +M   G+ V+ + +N L+ G CK+G   +A  L   + +     +A T + + +G
Sbjct: 352 EMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASG 411

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     E A +L  +M   G  PN   F +L+  +C+ ++F  A  +   M +K  AP 
Sbjct: 412 FCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPS 471

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
            +  +         GK E A KL  +M+ RGL+P  +     I     +GE+ SG + 
Sbjct: 472 VVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLI-----DGERASGNVD 524



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 68/154 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L   Y   + F  A   F  M   G  P + + N F+       +++ A     EM+
Sbjct: 440 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+ YT   ++      G ++RA+E+F  M  +G   +V TY  +ISG    G   
Sbjct: 500 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 559

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            A K  + M K GI P+   +++LI    K G L
Sbjct: 560 EAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 198/438 (45%), Gaps = 47/438 (10%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI------LYSYRMCDSSPLVFDL 198
           +  H+L ++R +  S  +L  ++      L + L D +      L   R   +S  V D 
Sbjct: 70  LAAHLLARDRLYAHSRRVLSRLVALRRPHLAASLVDLLHRAALALGPRRSALAS--VVDT 127

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L    A R    +A     ++R+    P   +CN  L  L       +    ++++    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP--- 184

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH---------- 308
            +PNV+T N+V+   CK G +  A  +F  M+ MG +P V T+N+LI G+          
Sbjct: 185 -APNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 309 -------------------------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
                                    C  G +  A  +   M++ G+  NV+TF+T +  F
Sbjct: 244 QLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAF 303

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+G + EA ++F++M+   ++ N  TY  LI+G  + G  +    L +EM+R G+ +++
Sbjct: 304 CKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNV 363

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TY  L+ GLCKE K  +A  +++ ++K  +  N   Y+ LI G  + KNSE+A  L   
Sbjct: 364 VTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSE 423

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M   G   +  ++  L+   C     D A  +L +M E  + P+ II + +       GK
Sbjct: 424 MKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGK 483

Query: 524 DELAMKLFRKMEIRGLLP 541
              A+ + +K+   G  P
Sbjct: 484 VPEAIAMLQKILDSGFQP 501



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 192/430 (44%), Gaps = 36/430 (8%)

Query: 111 HVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           H+LL++ +D    L    + Q   P+  T    +IV+  L K  +   + S+   + +  
Sbjct: 162 HILLRLARDRSGRLVRRLFEQLPAPNVFTF---NIVIDFLCKEGELAEARSLFSRMKEMG 218

Query: 171 SFDLPSKL-FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
              LP  + F+S++  Y  C     V  L+                  +MR  G    + 
Sbjct: 219 C--LPDVVTFNSLIDGYGKCGELDEVEQLVE-----------------EMRRSGCKADVV 259

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + N  ++      R++ A G++  M+R  +  NV T +  + AFCK G++  A+++F  M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              G   +  TY  LI G C  G L  A+   + M + G+  NV+T+  L+ G CK+ K+
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +   M+   V  N + Y TLI+G+    NSE    L  EM   G+++DI  Y AL
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I GLC   K  +A  L+  +D++ L PN   Y+ ++           A  + + ++ SG 
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           +PN           C NE    A ++  EM+ K M+ D ++ + L  G    G    A  
Sbjct: 500 QPNNG---------CLNE----AVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFA 546

Query: 530 LFRKMEIRGL 539
           L  KM   GL
Sbjct: 547 LKAKMIDSGL 556



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 133/315 (42%), Gaps = 32/315 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLD----SERVDIAL 248
           + F      +      R A   F QMR  G      + N+F  + L+D    + R+D A+
Sbjct: 294 VTFSTFVDAFCKEGLVREAMKLFAQMRVRGM-----ALNEFTYTCLIDGTCKAGRLDDAI 348

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM R  +  NV T  +++   CK   +  A +V + ME  G   +   Y TLI GH
Sbjct: 349 VLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
                   A+   + M+  G++ ++  +  LI G C   KL EA  + ++M  + + PN 
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 369 VTYNTLING---YGQV-------------------GNSEMGASLYEEMLRNGIKVDILTY 406
           + Y T+++     G+V                   G       L+ EM+  G+ +D + Y
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVY 528

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            AL+ G  K+G    A  L   +  + L  +   Y+  I+G C       A +++  MI 
Sbjct: 529 TALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIG 588

Query: 467 SGCRPNKHIFEMLMS 481
            G  P++ ++  L++
Sbjct: 589 HGIAPDRAVYNCLIT 603



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 40/260 (15%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + T+++++  L K RK   +E +LR +++         L+ ++++ + M  +S     
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLR-MMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           LL                  +M++ G    I      +  L +  ++D A     +M  +
Sbjct: 420 LL-----------------SEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDES 462

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS-------------------- 297
            + PN      +M A  K G +  A+ + + +   GF P+                    
Sbjct: 463 GLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMS 522

Query: 298 --VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
                Y  L+ G+  +G L  A   K  M  +G+Q ++  +   I GFC    + EA  +
Sbjct: 523 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 582

Query: 356 FSEMKATNVSPNVVTYNTLI 375
           FSEM    ++P+   YN LI
Sbjct: 583 FSEMIGHGIAPDRAVYNCLI 602


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 178/384 (46%), Gaps = 37/384 (9%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           R   + ++++RG+           + D +L   R C    + + +L +    R  ++ A 
Sbjct: 158 RDAYTCDTLIRGLCGRGRTANALAVLDEMLR--RRCVPDVVTYTILLEATCKRSGYKQAM 215

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK--------------------- 252
               +MRD G  P I + N  ++ +    RVD A+ F K                     
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275

Query: 253 --------------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                         EM +    PNV T NM++   C+ G++E A+EV + +   G  P+ 
Sbjct: 276 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNS 335

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            +YN L+   C +  +  AM F +LM   G  P+++++NTL+   C+ G++  A  +  +
Sbjct: 336 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 395

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           +K    +P +++YNT+I+G  + G ++    L  EM+  G++ DI+TY+ +  GLC+E +
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 455

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            + A      +    + PN   Y+A+I G C R+ +  A  L+  MI +GC PN+  + +
Sbjct: 456 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 515

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEK 502
           L+           A ++L E+  +
Sbjct: 516 LIEGLAYEGLIKEARDLLDELCSR 539



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 153/316 (48%), Gaps = 3/316 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  ++    + +VD A  +  E    R   + YT + ++   C  G    A+ V
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVER---DAYTCDTLIRGLCGRGRTANALAV 182

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M     +P V TY  L+   C +     AMK  + M   G  P+++T+N ++ G C+
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G++ +A      + +    PN V+YN ++ G       E    L  EM + G   +++T
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N LI  LC++G  + A  +++ + K    PN+ +Y+ L+   C +K  ++A      M+
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC P+   +  L++  C++ + D A E+L ++ +K  AP  I  + +  GL   GK +
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 526 LAMKLFRKMEIRGLLP 541
            A++L  +M  +GL P
Sbjct: 423 EALELLNEMVSKGLQP 438



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 158/345 (45%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           D L +    R +  NA     +M     +P + +    L +         A+    EMR 
Sbjct: 164 DTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRD 223

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
              +P++ T N+V++  C+ G ++ A+E  KN+ S G  P+  +YN ++ G C       
Sbjct: 224 KGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWED 283

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A +    M + G  PNV+TFN LI   C+KG +  A  +  ++     SPN ++YN L++
Sbjct: 284 AEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLH 343

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + +    +   +  + M+  G   DI++YN L+  LC+ G+   A  L+  L      P
Sbjct: 344 AFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAP 403

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
              +Y+ +I G      ++ A +L   M+  G +P+   +  + +  C+ +  + A    
Sbjct: 404 VLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 463

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++ +  + P++++ + +  GL    +   A+ LF  M   G +P
Sbjct: 464 GKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/462 (26%), Positives = 220/462 (47%), Gaps = 12/462 (2%)

Query: 93  DWKKLTALSTHLTPFRVKHVLLKVQKDYVL--SLEFFTWVQTHKPSSLTLETHSIVLHIL 150
           D  K   L  +LTP   +H          L  +L+FF++   +     T+ ++ I++ +L
Sbjct: 62  DSSKCKTLIPNLTPHEFEHSFFTHHTTVNLKTTLDFFSFASKNFKFRFTVRSYCILIRLL 121

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS-----YRMCDSSPLVFDLLFKTYAH 205
             +     ++  L+ +++ ++ + P K  D+ L         + + S    DLL      
Sbjct: 122 LASNHIPRAKFTLKRLIEGNA-NTPLKKTDARLSEIASAFLELGERSHGELDLLIYILCS 180

Query: 206 RKK---FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           + +   F  A DTF      G  P ++SCN  +SSL+ S  +  +   +  M R  +  +
Sbjct: 181 QFQHLGFHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLID 240

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           VYT    ++A+CK G I+ AV +F  M   G +P+V TYN LI G C  G L  A+ FK 
Sbjct: 241 VYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKG 300

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M +N + P+++T+  L+ G  K  K  EAN +  EM +   SPN   +N LI+GY + G
Sbjct: 301 RMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKG 360

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           N +    + ++M   G+K + +T+N L+ G C+  + ++A  +++ L  N L  N    S
Sbjct: 361 NMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACS 420

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE- 501
            ++   C     + A ++ K+++    + N  +  +L+   C+      A ++   + + 
Sbjct: 421 YVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADK 480

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           K +A ++   + L  GL   G  E    + ++M  RGL+  G
Sbjct: 481 KGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDG 522



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 143/300 (47%), Gaps = 3/300 (1%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           E +D+   +++   +  ++ N  T N +++  C+ G +E    V K M   G +    +Y
Sbjct: 469 EAIDL---WFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISY 525

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NTLI G C  G +  A K K  M K G +P+  T+N L+ G   KGK+ +  R+  E K 
Sbjct: 526 NTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKD 585

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V PN+ TY  ++ GY      +   SL+ +++ N +++  + YN LI    K G   +
Sbjct: 586 HGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTE 645

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L   +  +++ P   TYS++I G C     E A  +++ M   G  PN   +  L+ 
Sbjct: 646 AFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIG 705

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +C+    D+   +L EM   C+ P+ I  + +  G    G  + A KL  +M   G+ P
Sbjct: 706 GYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISP 765



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 119/242 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P   + N  +  L D  ++D       E + + + PN+YT  +++  +C   
Sbjct: 547 KMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNAD 606

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I+ AV +F  +       S   YN LI+ H   G  + A K ++ M  + I P + T++
Sbjct: 607 RIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYS 666

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           ++I G C    + EA  IF EM+   + PNV  Y  LI GY ++G  +   S+ +EM  N
Sbjct: 667 SIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSN 726

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I+ + +TY  +I G CK G TK+A  L+ ++  N + P+  TY+ L  G C     E  
Sbjct: 727 CIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786

Query: 458 FQ 459
            Q
Sbjct: 787 LQ 788



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 184/391 (47%), Gaps = 21/391 (5%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S+  +  S VLH+L K+ KF S+  I++ +L               L + ++ DS   + 
Sbjct: 413 SVNEDACSYVLHLLCKSSKFDSALKIVKALL---------------LRNIKVNDS---LL 454

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            LL        K   A D + ++ D  G      + N  L  L +   ++      KEM 
Sbjct: 455 TLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMV 514

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  +  + N ++   CK G IE A ++ + M   GF P   TYN L+ G  +KG + 
Sbjct: 515 ERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMD 574

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +  +  + +G+ PN+ T+  ++ G+C   ++  A  +F+++    V  + V YN LI
Sbjct: 575 DVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILI 634

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
             + + GN      L + M  + I   I TY+++I G+C     ++A  + +++    L+
Sbjct: 635 AAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLM 694

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN   Y+ALI G C     ++   + + M  +  +PNK  + +++  +C+  +   A ++
Sbjct: 695 PNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKL 754

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           L EM+   ++PD++  + L  G  +C ++EL
Sbjct: 755 LNEMIANGISPDTVTYTVLQKG--YCKENEL 783



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 126/251 (50%), Gaps = 7/251 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L K  A + K  +      + +D+G +P I +    L    +++R+D A+  + ++ 
Sbjct: 560 YNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLV 619

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N++  +    N+++ A  K G    A ++   M S    P++ TY+++I G C   L+ 
Sbjct: 620 YNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVE 679

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   G+ PNV  +  LI G+CK G++ +   I  EM +  + PN +TY  +I
Sbjct: 680 EAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMI 739

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY ++GN++    L  EM+ NGI  D +TY  L  G CKE +      L + L  ++ V
Sbjct: 740 DGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENE------LEETLQGDTAV 793

Query: 436 P-NASTYSALI 445
           P    TY+ L+
Sbjct: 794 PLEEITYTTLV 804



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 182/410 (44%), Gaps = 25/410 (6%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           +L T+ I+++ L K  KF  + S+L         ++ SK F            +  VF+ 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVL--------VEMYSKGFSP----------NEFVFNA 351

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y+ +    +A      M   G  P   + N  L     + +++ A    + +  N 
Sbjct: 352 LIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNV 411

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG--HCNKGLLSL 316
           +S N    + V+H  CK    + A+++ K +       + +    L+ G   C K L ++
Sbjct: 412 LSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAI 471

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            + F+ L +K G+  N  T N L++G C++G + E   +  EM    +  + ++YNTLI 
Sbjct: 472 DLWFR-LADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIF 530

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G  E    L E+M++ G K D  TYN L+ GL  +GK      ++ +   + +VP
Sbjct: 531 GCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVP 590

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY+ ++ G C     + A  L+  ++ +    +  ++ +L++   +  +F  A ++ 
Sbjct: 591 NIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLR 650

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKD--ELAMKLFRKMEIRGLLPKGF 544
             M    + P     S +  G+  C  D  E A  +F +M   GL+P  F
Sbjct: 651 DAMRSSNIHPTIFTYSSIIHGM--CCNDLVEEAKGIFEEMRNEGLMPNVF 698



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 105/215 (48%), Gaps = 7/215 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L G  ++D  D    LF+ ++Y+    + S +V+++L   ++    F  A      MR 
Sbjct: 598 MLEGYCNADRIDNAVSLFNKLVYN--KVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRS 655

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P I + +  +  +  ++ V+ A G ++EMR   + PNV+    ++  +CKLG +++
Sbjct: 656 SNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQ 715

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
              + + M S    P+  TY  +I G+C  G    A K  N M  NGI P+ +T+  L  
Sbjct: 716 IESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQK 775

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           G+CK+ +L E     +    T V    +TY TL++
Sbjct: 776 GYCKENELEE-----TLQGDTAVPLEEITYTTLVD 805


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 176/385 (45%), Gaps = 35/385 (9%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            F++L   Y        A     QM +YG  P   + N  L++L    ++        +M
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQM 272

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           + + + PN  T N+++H +CKL  ++ A EV + M   G +P V TYNT++ G C++G +
Sbjct: 273 KNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKI 332

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFG-------------------------------- 342
             A++ ++ ME   + P+V+T+NTLI G                                
Sbjct: 333 DEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIM 392

Query: 343 ---FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
              FC +GK+ EA+ +  +M  +  SP+  TYNT+INGY + G       + +EM R G+
Sbjct: 393 IKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGL 452

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K+D  T N L+  +C E +   A  L     K   + +  TY  LI G    + ++RA +
Sbjct: 453 KLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALK 512

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L++ M  +G       +  ++   C +   D+A + L E+LEK + PD    + +  G  
Sbjct: 513 LWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYC 572

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G  E A +   KM    L P  F
Sbjct: 573 WEGAVEKAFQFHNKMVEHSLKPDIF 597



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 41/375 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  +  +P + + N  +    +    D A    +EM+   +  N  T N+++  FC  G
Sbjct: 341 KMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEG 400

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I+ A  V   M   GF P   TYNT+I+G+C  G ++ A K  + M + G++ +  T N
Sbjct: 401 KIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLN 460

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+   C + +L +A  +  + +      + VTY TLI GY +   ++    L+EEM   
Sbjct: 461 TLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKET 520

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI   I+TYN +I GLC  GKT +A   + +L +  LVP+ ST + +I G C     E+A
Sbjct: 521 GIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKA 580

Query: 458 FQLYKSMIRSGCRP-------------------------NKHI----------FEMLMST 482
           FQ +  M+    +P                         N  I          + +++S+
Sbjct: 581 FQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS 640

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           FC+    + A +++ EM  K + PD    + + +GL   G+ E A KL  K   +G    
Sbjct: 641 FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKG---- 696

Query: 543 GFDKLRTINCAPENG 557
              +++T + +PE G
Sbjct: 697 --QQVKTQDTSPELG 709



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 210/458 (45%), Gaps = 46/458 (10%)

Query: 124 LEFFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L FF W Q++  SSL  + +    +L  L   RKF  ++S+L   + SD    P     +
Sbjct: 71  LSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDH---PHHSLHA 127

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
            L         PL+ D     Y   K+       F +M+   F P + +CN  L++L+ S
Sbjct: 128 HLLRSDHTIPKPLL-DTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRS 186

Query: 242 ERVDIALGFYKEMRRNRI----SPNVYTLNMVMHAFCKLGIIERAV-------------- 283
                +L F +E+ ++ +     PNV T N+++H +C     E A+              
Sbjct: 187 NSSH-SLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPD 245

Query: 284 ---------------------EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
                                ++   M++ G  P+  TYN L+ G+C    L  A +   
Sbjct: 246 NVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIE 305

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
           LM   G+ P+V T+NT++ G C +GK+ EA R+  +M++  + P+VVTYNTLI+G  +  
Sbjct: 306 LMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHR 365

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
            S+    L EEM   G+K + +T+N +I   C EGK  +A+ ++  + ++   P+  TY+
Sbjct: 366 GSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYN 425

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +I G C       A+++   M R G + +      L+ T C  +  D A  + ++  ++
Sbjct: 426 TMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKR 485

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
               D +    L  G     + + A+KL+ +M+  G++
Sbjct: 486 GYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIV 523



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/272 (25%), Positives = 123/272 (45%), Gaps = 11/272 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y   ++   A   + +M++ G +  I + N  +  L  S + D A+    E
Sbjct: 492 VTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNE 551

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    + P+  T N+++H +C  G +E+A +    M      P + T N L+ G C +G+
Sbjct: 552 LLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGM 611

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L   +   N     G   + +T+N +I  FCK+ +L +A  + +EM+  N+ P+  TYN 
Sbjct: 612 LEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNA 671

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDI-----------LTYNALILGLCKEGKTKKA 422
           ++ G  + G +E    L  +    G +V             + Y+  I  LC +GK K A
Sbjct: 672 IVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDA 731

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             L +  ++  +  N  TY  L+ G   R+ S
Sbjct: 732 MKLFQQAEQKGVSLNKYTYIKLMDGLLKRRKS 763



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 107/232 (46%), Gaps = 5/232 (2%)

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE---ANRIFSEMKATNVSPNVVTYN 372
           L  +  N M++   +PN++T NTL+    +    H    +  +F +     V PNV T+N
Sbjct: 156 LGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFN 215

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+GY    N+E    L  +M   G   D +TYN ++  LCK  +  +   L+  +  +
Sbjct: 216 ILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNS 275

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L PN +TY+ L+ G C  K  + A ++ + M   G  P+   +  ++   C     D A
Sbjct: 276 GLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEA 335

Query: 493 AEVLLEMLEKCMAPDSIILSELYSG-LHHCGKDELAMKLFRKMEIRGLLPKG 543
             +  +M    + PD +  + L  G   H G D  A KL  +M+ RG+   G
Sbjct: 336 VRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDA-AFKLVEEMKARGVKENG 386


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 198/427 (46%), Gaps = 25/427 (5%)

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-SDSFDLPSK 177
           D   +L FF WV        T  +H+ +L +L + R   + + ++  ++  SD+ +   +
Sbjct: 67  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMRE 126

Query: 178 LFDSILYSYRMC-DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
             D+I    R+  D     + L+                 C+  +Y +  +I+       
Sbjct: 127 AVDAIQAIRRVGGDLRKACWLLMMMPLMG-----------CRRNEYSYTILIQG------ 169

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L ++  V  AL     M ++  S N++T  +++   CK G I  A  V + M   G +P
Sbjct: 170 -LCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVP 228

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           SV TYN +I G+C  G +  A+  K LME+NG  P+  T+N LI+G C + K  EA  + 
Sbjct: 229 SVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE-KPDEAEELL 287

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           ++      +P V+T+  +INGY +    +    +   ML +  K+D+  Y  LI  L K+
Sbjct: 288 NDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKK 347

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            + K+A   V ++  N L PN   Y+++I G C       A ++++ M   GCRPN   +
Sbjct: 348 CRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTY 407

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
             L+    Q++   +A  ++ +M E  + P  I  + L  G   C K E   A +LF  M
Sbjct: 408 SSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQG--QCKKHEFDNAFRLFEMM 465

Query: 535 EIRGLLP 541
           E  GL P
Sbjct: 466 EQNGLTP 472



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 164/343 (47%), Gaps = 4/343 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + LL K      +   A     +M   G +P + + N  +     S R+  ALG    M 
Sbjct: 198 YTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 257

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           RN  +P+ +T N++++  C     E A E+  +    GF P+V T+  +I+G+C    + 
Sbjct: 258 RNGCNPDDWTYNILIYGLCGEKPDE-AEELLNDAIVRGFTPTVITFTNIINGYCKAERID 316

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++ K  M  +  + ++  +  LI    KK +  EA    SEM A  ++PNVV Y ++I
Sbjct: 317 DALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSII 376

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY +VG       ++  M   G + +  TY++LI GL ++ K  KA  L+  + ++ + 
Sbjct: 377 DGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGIT 436

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   TY+ LI GQC +   + AF+L++ M ++G  P++  + +L    C++    RA E 
Sbjct: 437 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS---GRAEEA 493

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              ++ K +    +  + L  G    G  + A  L  KM   G
Sbjct: 494 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 536



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 132/268 (49%), Gaps = 1/268 (0%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G + +A  +   M  MG   +  +Y  LI G C    +  A+    +M ++G   N+ T+
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             LI G CK+G++H A R+  EM    V P+V TYN +I+GY + G  +    +   M R
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           NG   D  TYN LI GLC E K  +A  L+ D       P   T++ +I G C  +  + 
Sbjct: 259 NGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDD 317

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A ++  SM+ S C+ +   + +L++   +   F  A E + EM    +AP+ +I + +  
Sbjct: 318 ALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIID 377

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           G    GK   A+++FR ME  G  P  +
Sbjct: 378 GYCKVGKVGAALEVFRLMEHEGCRPNAW 405



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/439 (22%), Positives = 185/439 (42%), Gaps = 40/439 (9%)

Query: 138 LTLETHSIVLHILTKNRKFKSSE-------------------SILRGILDSDSFDLPSKL 178
           L L+ + +++++L K  +FK ++                   SI+ G           ++
Sbjct: 332 LDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEV 391

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           F   L  +  C  +   +  L       +K   A     +M++ G  P + +    +   
Sbjct: 392 FR--LMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQ 449

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                 D A   ++ M +N ++P+    N++ HA CK G   RA E +  +   G + + 
Sbjct: 450 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAEEAYSFLVRKGVVLTK 506

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY +L+ G    G    A      M   G + +  T++ L+   CK+ KL+EA  I  +
Sbjct: 507 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQ 566

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M  + V  N+V Y  +I+   + G  +   S++ EM+ +G K    TY   I   CK G+
Sbjct: 567 MTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQ 626

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A +L+ +++++ + P+  TY+  I G       +RAF   K MI + C PN   + +
Sbjct: 627 IEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWI 686

Query: 479 LMSTFCQNE----------------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           L+  F +                  + D   ++L  M++  + P ++  S + +G     
Sbjct: 687 LLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKAT 746

Query: 523 KDELAMKLFRKMEIRGLLP 541
           + E A  LF  M  + + P
Sbjct: 747 RLEEACVLFDHMRGKDISP 765



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 137/321 (42%), Gaps = 17/321 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L +L   ++++ AL    +M  + +  N+    +++    K G  + A  +F  M S G
Sbjct: 547 LLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 606

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             PS TTY   IS +C  G +  A      ME++G+ P+V+T+N  I G    G +  A 
Sbjct: 607 HKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAF 666

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQ--------VGNSEMG--------ASLYEEMLRN 397
                M   +  PN  TY  L+  + +        V  S M           L E M+++
Sbjct: 667 STLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKH 726

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+    +TY+++I G CK  + ++A  L   +    + PN   Y+ LI   C  K   +A
Sbjct: 727 GLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKA 786

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE-KCMAPDSIILSELYS 516
                 MI  G +P+   +  L+   C   D+D+A  +  ++L  +    + +    L  
Sbjct: 787 VSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILND 846

Query: 517 GLHHCGKDELAMKLFRKMEIR 537
           GL   G  +   +L   ME R
Sbjct: 847 GLLKAGHVDFCSQLLSAMENR 867



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 148/358 (41%), Gaps = 41/358 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S++L  L K +K   + SIL                D +  S   C+   + + ++  
Sbjct: 543 TYSVLLQALCKQKKLNEALSIL----------------DQMTLSGVKCN--IVAYTIIIS 584

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K  +A   F +M   G  P   +   F+SS     +++ A     EM R+ ++P
Sbjct: 585 EMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAP 644

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------------- 305
           +V T N+ ++    +G ++RA    K M      P+  TY  L+                
Sbjct: 645 DVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDT 704

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG  N   L    +    M K+G+ P  +T++++I GFCK  +L EA  +F  M+  ++S
Sbjct: 705 SGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDIS 764

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN   Y  LI     +       S   +M+  G +  + +Y+ LI+GLC EG   KA  L
Sbjct: 765 PNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSL 824

Query: 426 VKDL----DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             DL    D N    N   +  L  G     + +   QL  +M    C+ +   + M+
Sbjct: 825 FCDLLGMEDYNH---NEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 183/362 (50%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L KT     K  +A D F  M      P I   N+ LS+++  ++ D+ +   K+M    
Sbjct: 56  LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I  ++YT N+V++ FC    +  A+ +   M  +G+ P   T  +L++G C +  +S A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+++ +N +I   CK  ++++A   F E++   + PNVVTY  L+NG 
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                    A L  +M++  I  +++TY+AL+    K GK  +A  L +++ + S+ P+ 
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS+L+ G C+    + A Q++  M+  GC  +   +  L++ FC+ +  +   ++  E
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M ++ +  +++  + L  G    G  + A + F +M+  G+ P  +     +    +NGE
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 559 KE 560
            E
Sbjct: 416 LE 417



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 177/359 (49%), Gaps = 8/359 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +  +    K+  +A D F ++   G  P + +    ++ L +S R   A     +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M + +I+PNV T + ++ AF K G +  A E+F+ M  M   P + TY++L++G C    
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDR 310

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  +LM   G   +V+++NTLI GFCK  ++ +  ++F EM    +  N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ Q G+ +     + +M   GI  DI TYN L+ GLC  G+ +KA  + +D+ K  
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +  TY+ +I G C     E A+ L+ S+   G +P+   +  +MS  C         
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            +  +M ++ +  +   LS+        G   L+ +L +KM   G  P     +++  C
Sbjct: 491 ALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVC 541



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 161/324 (49%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G+ P   +    ++      RV  A+    +M      P++   N ++ + CK  
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A + FK +E  G  P+V TY  L++G CN    S A +  + M K  I PNVIT++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+  F K GK+ EA  +F EM   ++ P++VTY++L+NG       +    +++ M+  
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSK 324

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   D+++YN LI G CK  + +    L +++ +  LV N  TY+ LI G     + ++A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            + +  M   G  P+   + +L+   C N + ++A  +  +M ++ M  D +  + +  G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           +   GK E A  LF  + ++GL P
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKP 468



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 17/266 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+   D  D  +++FD  L   + C +  + ++ L   +   K+  +    F +M 
Sbjct: 300 SLVNGLCLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +     +  VD A  F+ +M    ISP+++T N+++   C  G +E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +F++M+       + TY T+I G C  G +  A      +   G++P+++T+ T++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C KG LHE   ++++MK   +  N  T +         G+  + A L ++ML  G  
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCG-- 527

Query: 401 VDILTYNALILGLCKEGKTKKAAYLV 426
                Y   +L   K G  KKA  L+
Sbjct: 528 -----YAPSLLKDIKSGVCKKALSLL 548


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/319 (32%), Positives = 163/319 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P + + N  + +L    ++D A+  ++EM     +P+V+T + +M+  CK   ++ A
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V +   M++ G +P+  T+N LI      G LS A K  + M   G  PN +T+NTLI G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C KGKL +A  +  +M ++   PN VTY T+ING  +   +E G  +   M   G K +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
              Y++LI GL KEGK++ A  L K++ +    PN   Y A I G C  +  + A  + +
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G  PN   +  LM  F +  D  +A  V  EM+ + M  + +  S L +GL   G
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +   A+ ++  M   GL P
Sbjct: 469 RLREALTVWTHMLGEGLKP 487



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 200/424 (47%), Gaps = 2/424 (0%)

Query: 115 KVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL 174
           +V  + +  L F    + H P       H +   +  K +  KS  S+L  I+    F  
Sbjct: 96  RVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCK-QTVKSFNSVLNVIIQEGDFSY 154

Query: 175 PSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
             K +  +   + +    + L ++L+ K      +   A DTF +M      P + + + 
Sbjct: 155 AFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYST 214

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++ L    RVD A+    EM+     PN  T N+++ A  K G + RA ++  NM   G
Sbjct: 215 LMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKG 274

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P+  TYNTLI G C KG L  A+     M  +   PN +T+ T+I G  K+ +  +  
Sbjct: 275 CVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV 334

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            I   M+      N   Y++LI+G  + G SE    L++EM   G K +++ Y A I GL
Sbjct: 335 HILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGL 394

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C++ K  +A  +++++     +PNA TYS+L+ G   + +S++A  ++K M+    R N 
Sbjct: 395 CRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNV 454

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
               +L++  C++     A  V   ML + + PD +  S +  GL   G  +  +KLF +
Sbjct: 455 VCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYE 514

Query: 534 MEIR 537
           M+ +
Sbjct: 515 MQCQ 518



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 179/396 (45%), Gaps = 56/396 (14%)

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG-------FLPIIESCNKFLSS 237
           SY++ D++   F  L + YA  ++F        +M+  G       F+ I ++C K   +
Sbjct: 60  SYKLGDAT---FYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGK---A 113

Query: 238 LLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNM---ESMG 293
            L  E    A+ F+  M  +      V + N V++   + G    A + + ++    S G
Sbjct: 114 HLPGE----AVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKG 169

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           F P++ TYN +I   C  G +  A+     M      P+V T++TL+ G CK+ ++ EA 
Sbjct: 170 FQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAV 229

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM+A    PN VT+N LI+   + G+    A L + M   G   + +TYN LI GL
Sbjct: 230 FLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGL 289

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNAST--------------------------------- 440
           C +GK  KA  L++ +  +  VPN  T                                 
Sbjct: 290 CLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANE 349

Query: 441 --YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             YS+LI+G      SE A +L+K M   GC+PN  ++   +   C++E  D A ++L E
Sbjct: 350 YIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQE 409

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           ML K   P++   S L  G    G  + A+ ++++M
Sbjct: 410 MLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 138/332 (41%), Gaps = 37/332 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +P+ F++L    +       A      M   G +P   + N  +  L    ++D AL
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M  ++  PN  T   +++   K    E  V +  +ME  G   +   Y++LISG 
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G    A++    M + G +PNV+ +   I G C+  K  EA  I  EM +    PN 
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEM---------------------------------- 394
            TY++L+ G+ + G+S+    +++EM                                  
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479

Query: 395 -LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD--KNSLVPNASTYSALITGQCVR 451
            L  G+K D++ Y+++I GLC  G   K   L  ++   +    P+  TY+ L    C +
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 539

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            N  RA  L  SM+  GC P+     + + T 
Sbjct: 540 DNLTRAIDLLNSMLDEGCDPDSLTCNIFLETL 571



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 74/287 (25%), Positives = 120/287 (41%), Gaps = 11/287 (3%)

Query: 284 EVFKNMESMG-FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++FK+    G +     T+  LI  +          +  + M++ G    V+T    I  
Sbjct: 50  QIFKSRPQFGSYKLGDATFYRLIENYATSREFHFIHQVLDRMKREG---RVLTETIFILI 106

Query: 343 FCKKGKLH---EANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEML--- 395
           F   GK H   EA   F  M    +    V ++N+++N   Q G+       Y  +    
Sbjct: 107 FKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGAN 166

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G + ++LTYN +I  LCK G+  +A    +++   +  P+  TYS L+ G C  +  +
Sbjct: 167 SKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVD 226

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L   M   GC PN   F +L+    +N D  RAA+++  M  K   P+ +  + L 
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLI 286

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            GL   GK + A+ L  KM     +P        IN   +    E G
Sbjct: 287 HGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDG 333


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 170/330 (51%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     S +   A+GF K+MR + + P+V T +++M 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   F+ LI  + K+GK+ +A  +FS+M+   ++PN VTY  +I    + G  E     +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+    + YN+LI GLC   K ++A  L+ ++    +  N   ++++I   C  
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L++ M+R G +PN   +  L++ +C     D A ++L  M+   + P+++  
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L +G     + E A+ LF++ME  G+ P
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSP 579



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 7/358 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD---YGFLPIIESCNKFLSSLLDSERVD 245
           C  +   +++L K      + + A +    M D    G  P + S    ++        D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   Y EM    I P+V T N ++ A CK   +++A+EV   M   G +P   TYN+++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C+ G    A+ F   M  +G++P+V+T++ L+   CK G+  EA +IF  M    + 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P + TY TL+ GY   G       L + M+RNGI  D   ++ LI    K+GK  +A  +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + +  L PNA TY A+I   C     E A   ++ MI  G  P   ++  L+   C 
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
              ++RA E++LEML++ +  ++I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKP 509



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 170/344 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +SP     N ++H  C     ERA E+   M   G   +   +N++I  HC +G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K   LM + G++PNVIT+NTLI G+C  GK+ EA ++ S M +  + PN VTY+TL
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L++EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C  K ++ A Q+++++     +     F +++    +    D A +
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           + +      + P+      +   +   G  E   +LF  ME  G
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 150/299 (50%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++PN  T   V+   CK G +E A+  F+ M   G  P    YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI G C       A +    M   GI  N I FN++I   CK+G++ E+ ++F  M   
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V PNV+TYNTLINGY   G  +    L   M+  G+K + +TY+ LI G CK  + + A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L K+++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            C+N+  D A ++   +    +  ++   + +   L   G+++ A  LF      GL+P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 154/344 (44%), Gaps = 6/344 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + LL        +   A   F  M   G  P I +    L        +    G    
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M RN I P+ Y  ++++ A+ K G +++A+ VF  M   G  P+  TY  +I   C  G 
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  AM +   M   G+ P  I +N+LI G C   K   A  +  EM    +  N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+ + + G       L+E M+R G+K +++TYN LI G C  GK  +A  L+  +    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  TYS LI G C     E A  L+K M  SG  P+   + +++    Q      A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL---AMKLFRKM 534
           E+ + + E   +   I LS     LH   K++L   A+++F+ +
Sbjct: 602 ELYVRITE---SGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 3/283 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN---GIQPNVITFNTLIF 341
           V + M  +G IP+V +YN L+ G C++     A++  ++M  +   G  P+V+++ T+I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF K+G   +A   + EM    + P+VVTYN++I    +    +    +   M++NG+  
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D +TYN+++ G C  G+ K+A   +K +  + + P+  TYS L+   C       A +++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM + G +P    +  L+  +           +L  M+   + PD  + S L       
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           GK + AM +F KM  +GL P        I    ++G  E   L
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 20/339 (5%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++LY  +M D   SP  +V++ L        K+  A +   +M D G  L  I  
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-- 477

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   ++ M R  + PNV T N +++ +C  G ++ A+++ 
Sbjct: 478 ---FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S+G  P+  TY+TLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    +K++  T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKS 463
           N +I  L K G+  +A  L      N LVPN  TY  +   I GQ +    E   QL+ S
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLS 711

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           M  +GC  +  +   ++    Q  +  RA   L  + EK
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 128/310 (41%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P + TY  LI 
Sbjct: 38  FDELLRRGR-GASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G + + I F  L+ G C   +  +A              
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +     P+VV+Y T+ING+ + G+S+  
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML  GI  D++TYN++I  LCK     KA  ++  + KN ++P+  TY++++ G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A    K M   G  P+   + +LM   C+N     A ++   M ++ + P+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 336 ITTYGTLLQG 345



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           NR+ +   A  V+P++ TY  LI    + G  ++G +    +++ G +VD + +  L+ G
Sbjct: 73  NRM-ARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 413 LCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGC 469
           LC + +T  A  +V + + +   +PN  +Y+ L+ G C    S+ A +L   M   R G 
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 470 RPNKHI-FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            P   + +  +++ F +  D D+A     EML++ + PD +  + + + L      + AM
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 529 KLFRKMEIRGLLP 541
           ++   M   G++P
Sbjct: 252 EVLNTMVKNGVMP 264



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 21/319 (6%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPL------- 194
           ++H L    K++ +E ++  +LD     L +  F+SI+ S+    R+ +S  L       
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 195 -------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
                   ++ L   Y    K   A      M   G  P   + +  ++      R++ A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  +KEM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C   L   A++ F+NL   + ++    TFN +I    K G+  EA  +F    +  + P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N  TY  +       G  E    L+  M  NG  VD    N ++  L + G+  +A   +
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 427 KDLDKNSLVPNASTYSALI 445
             +D+      AST S  I
Sbjct: 745 SMIDEKHFSLEASTASLFI 763



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 35/218 (16%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y    +  +A   F +M   G  P I + N  L  L  + R   A   Y  
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM------------------------ 289
           +  +     + T N+++H  CK  + + A+++F+N+                        
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 290 -----------ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                       S G +P+  TY  +      +GLL    +    ME NG   +    N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           ++    ++G++  A    S +   + S    T +  I+
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|414876286|tpg|DAA53417.1| TPA: hypothetical protein ZEAMMB73_373649 [Zea mays]
          Length = 561

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 167/344 (48%), Gaps = 4/344 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++R A   F  M D G  P   +    + SL     ++ AL  +  MR   I   VY  N
Sbjct: 66  RYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMTVYPYN 125

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ +CK     +A  +   M + G  PS  +Y+ LI+G C KG L+ AM+    M +N
Sbjct: 126 SLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHREMTRN 185

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            +  NV TF  LI GFCK G + EA R+F +M  +++ PN VT+N +I GY +VGN    
Sbjct: 186 AVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVGNIRKA 245

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             LY++ML  G+  D  TY +LI  +C      KA   V DL+ N  V N+ + +AL+ G
Sbjct: 246 FQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLTALMHG 305

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C   ++E    L K M+     PN + +   +       + ++A  +   MLE C+A +
Sbjct: 306 FCKEGSAE---ILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLEGCLA-N 361

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           ++  + L  G    G+ + A+ L +K    G  P        IN
Sbjct: 362 TVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIIN 405



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%), Gaps = 7/294 (2%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I  N+   N  +    K G    A ++F+ M   G  P+  TY  LI   C +G++  A+
Sbjct: 47  IVANLLACNAWIDRLGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDAL 106

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + GI+  V  +N+LI G+CK    H+A  + +EM A  ++P+  +Y+ LI G 
Sbjct: 107 CMFDRMREKGIRMTVYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGL 166

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G+      L+ EM RN +  ++ T+ ALI G CK+G   +A  L   + ++SLVPN 
Sbjct: 167 CRKGDLASAMELHREMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNE 226

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            T++ +I G C   N  +AFQLY  M+  G  P+ + +  L+S  C      +A E + +
Sbjct: 227 VTFNVMIEGYCRVGNIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVAD 286

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           +   C   +S  L+ L  G    G  E+   L ++M     LP  +    T NC
Sbjct: 287 LENNCAVLNSFSLTALMHGFCKEGSAEI---LCKEMLAGHFLPNSY----TYNC 333



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 169/403 (41%), Gaps = 56/403 (13%)

Query: 150 LTKNRKFKSSESILRGILDS--DSFDLPSKLFDSILYSYRMCDSSPLVFDL--------- 198
           L K+ +++ +E + RG+ D   D  ++   +    L    M + +  +FD          
Sbjct: 61  LGKDGRYREAEKLFRGMADRGLDPNEVTYAILIHSLCKRGMMEDALCMFDRMREKGIRMT 120

Query: 199 ------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
                 L   Y     F  A     +M   G  P   S +  ++ L     +  A+  ++
Sbjct: 121 VYPYNSLINGYCKHNNFHQARGLLNEMVAKGLTPSPASYSPLIAGLCRKGDLASAMELHR 180

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM RN +S NVYT   ++  FCK G ++ A  +F  M     +P+  T+N +I G+C  G
Sbjct: 181 EMTRNAVSGNVYTFTALISGFCKDGNMDEATRLFHKMMESSLVPNEVTFNVMIEGYCRVG 240

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLI-------------------------------- 340
            +  A +  + M   G+ P+  T+ +LI                                
Sbjct: 241 NIRKAFQLYDQMLDRGLTPDNYTYRSLISVVCLTLGAMKAKEFVADLENNCAVLNSFSLT 300

Query: 341 ---FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
               GFCK+G    A  +  EM A +  PN  TYN  ++     G  E    L+  ML  
Sbjct: 301 ALMHGFCKEGS---AEILCKEMLAGHFLPNSYTYNCFLDYLANEGELEKAKVLHAAMLE- 356

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   + +T+N LI G C  G+ + A  L++   ++   P+  +YS +I   C   ++ +A
Sbjct: 357 GCLANTVTFNTLIKGFCMAGQIQGAIDLMQKNTESGFFPDCISYSTIINELCKVGDTNKA 416

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           F+L+  M+  G +P+   + +L+     + +FD+   +  +M+
Sbjct: 417 FELWNEMLYKGLKPDIVAYTILIRWCNIHGEFDKGLGIYSDMV 459


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 171/348 (49%), Gaps = 36/348 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PIIE   K L SL+  +     +   K+M    I P++ TL+++++ FC LG +  +  V
Sbjct: 9   PIIEF-GKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------- 330
              +  +G+ P+    NTL+ G C KG +  ++ F + +   G Q               
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 331 --------------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                               P+V+ ++T+I G CK   + EA  ++SEM A  + P+V+T
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI G+   G       L  EM+   I  +I TYN LI  LCKEGK K++  L+  + 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  + P+   YS L+ G C+    ++A Q++  M+++G  P+ + + ++++  C+ +  D
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            A  +L EML K M PD++  S L  GL   G+    + L ++M  RG
Sbjct: 308 EAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRG 355



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 150/292 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + +      P+V   + ++   CK  +++ A +++  M + G  P V TY TLI 
Sbjct: 134 AIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLIC 193

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A    N M    I PN+ T+NTLI   CK+GK+ E+  + + M    V P
Sbjct: 194 GFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKP 253

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VV Y+ L++GY  VG  +    ++  M++ G+  D+ +YN +I GLCK  +  +A  L+
Sbjct: 254 DVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLL 313

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++   +++P+  TYS+LI G C          L K M   G   N   +  L+   C+N
Sbjct: 314 REMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKN 373

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++ D+A  + ++M E+ + P+    + L  GL   G+ +    LF+ + ++G
Sbjct: 374 QNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 191/400 (47%), Gaps = 18/400 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           ++ I+L+ L K  + + +  +LR I D  +        D ++YS         + D L K
Sbjct: 117 SYGILLNGLCKIGETRCAIKLLRTIEDRSTRP------DVVMYST--------IIDGLCK 162

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                K    A D + +M   G  P + +    +     + ++  A G   EM    I+P
Sbjct: 163 D----KLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINP 218

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N+YT N ++   CK G ++ +  +   M   G  P V  Y+ L+ G+C  G +  A +  
Sbjct: 219 NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIF 278

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
            +M + G+ P+V ++N +I G CK  ++ EA  +  EM   N+ P+ VTY++LI+G  ++
Sbjct: 279 LVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKL 338

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L +EM   G   +++TYN+L+ GLCK     KA  L   + +  + PN  TY
Sbjct: 339 GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 398

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +ALI G C     ++   L++ ++  G   +   + +++S  C+   FD A  +  +M +
Sbjct: 399 TALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMED 458

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               P+++    +   L    +++ A KL  +M  +GLLP
Sbjct: 459 NGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 134/284 (47%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R  P +     ++ +  K+      + + K ME+ G +P + T + LI+  C+ G ++ +
Sbjct: 5   RHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFS 64

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 + K G QPN I  NTL+ G C KG++ ++     ++ A     + V+Y  L+NG
Sbjct: 65  FSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNG 124

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             ++G +     L   +     + D++ Y+ +I GLCK+    +A  L  +++   + P+
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPD 184

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ LI G C+      AF L   MI     PN + +  L+ T C+      +  +L 
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            M +K + PD +I S L  G    G+ + A ++F  M   G+ P
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNP 288


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 204/449 (45%), Gaps = 53/449 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS---DSFDLPSKLFDSILYSYR----------- 187
           T++I++  L K  K K ++S+L  +L +    +    S L D     Y            
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264

Query: 188 -MCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            +   +P V  ++++   +   K+   A + F +M    F PII+  NK L S    +  
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQF-NKILDSFAKMKHY 323

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A+     +    I P+++TLN++++ FC +G I     V   +   G+ PS  T NTL
Sbjct: 324 STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 383

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK---------------- 348
           I G C KG +  A+ F + +   G Q N +++ TLI G CK G                 
Sbjct: 384 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 443

Query: 349 -------------------LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
                              + EA  +FSEM    +S +VVTY+TLI G+  VG  +    
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L  EM+   I  D+ TY  L+  L KEGK K+A  ++  + K  + P+  TY+ L+ G  
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL 563

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +    ++A  ++ +M   G  P+ H + +L++ FC+++  D A  +  EM +K M PD++
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTV 623

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             S L  GL   G+      L  +M  RG
Sbjct: 624 TYSSLVDGLCKSGRISYVWDLIDEMRDRG 652



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 167/349 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            ++L   + H  +         ++   G+ P   + N  +  L    +V  AL F+ ++ 
Sbjct: 345 LNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLL 404

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 N  +   +++  CK+G    A+++ + ++     P+V  Y+T+I   C   L+S
Sbjct: 405 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 464

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M   GI  +V+T++TLI+GFC  GKL EA  + +EM    ++P+V TY  L+
Sbjct: 465 EAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILV 524

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G  +   S+   ML+  +K D+ TYN L+ G     + KKA ++   +    + 
Sbjct: 525 DALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVT 584

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ LI G C  K  + A  L+K M +    P+   +  L+   C++       ++
Sbjct: 585 PDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDL 644

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + EM ++    D I  + L  GL   G  + A+ LF KM+ +G+ P  F
Sbjct: 645 IDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 150/294 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G   EM    I+P+V T  +++ A  K G ++ A  V   M      P V TYNTL++
Sbjct: 501 AIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMN 560

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+     +  A    N M   G+ P+V T+  LI GFCK   + EA  +F EM   N+ P
Sbjct: 561 GYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVP 620

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTY++L++G  + G       L +EM   G   D++TYN+LI GLCK G   KA  L 
Sbjct: 621 DTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALF 680

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + PN  T++ L+ G C     + A ++++ ++  G   + +I+ +++   C+ 
Sbjct: 681 NKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQ 740

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              + A  +L +M E    P+++    + + L    +++ A KL R+M  RGLL
Sbjct: 741 GLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 158/318 (49%), Gaps = 4/318 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +E  +  + +L   + V  A G + EM    IS +V T + +++ FC +G ++ A+ +
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M      P V TY  L+     +G +  A     +M K  ++P+V T+NTL+ G+  
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++ +A  +F+ M    V+P+V TY  LING+ +    +   +L++EM +  +  D +T
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++L+ GLCK G+      L+ ++       +  TY++LI G C   + ++A  L+  M 
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GK 523
             G RPN   F +L+   C+      A EV  ++L K    D  I + +  G  HC  G 
Sbjct: 685 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYG--HCKQGL 742

Query: 524 DELAMKLFRKMEIRGLLP 541
            E A+ +  KME  G +P
Sbjct: 743 LEEALTMLSKMEENGCIP 760



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 157/317 (49%), Gaps = 1/317 (0%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           ++L    ++ +    P+  TLN ++   C  G ++ A+     + + GF  +  +Y TLI
Sbjct: 46  VSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLI 105

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G C  G    A+KF   ++    +PNV  +NT+I   CK   + EA  +FSEM    +S
Sbjct: 106 NGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGIS 165

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            NVVTY+TLI G+  VG  +    L   M+   I  ++ TYN L+  LCKEGK K+A  +
Sbjct: 166 ANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSV 225

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  + K  +  N  TYS L+ G  +    ++A  ++ +M   G  P+ H + ++++ FC+
Sbjct: 226 LAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCK 285

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
            +  D+A  +  EM+     P  I  +++            A+ L  ++E++G+ P  F 
Sbjct: 286 IKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFT 344

Query: 546 KLRTINCAPENGEKESG 562
               INC    G+   G
Sbjct: 345 LNILINCFCHMGQITFG 361



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 138/273 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K + A      M      P + + N  ++  L    V  A   +  M 
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              ++P+V+T  ++++ FCK  +++ A+ +FK M     +P   TY++L+ G C  G +S
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
                 + M   G   +VIT+N+LI G CK G L +A  +F++MK   + PN  T+  L+
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +    +++++L  G  +D+  YN +I G CK+G  ++A  ++  +++N  +
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCI 759

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           PNA T+  +I     +  +++A +L + MI  G
Sbjct: 760 PNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 147/278 (52%), Gaps = 2/278 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    + +L    +V  A      M +  + P+V+T N +M+ +  +  +++A  V
Sbjct: 515 PDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHV 574

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFC 344
           F  M  MG  P V TY  LI+G C   ++  A+  FK + +KN + P+ +T+++L+ G C
Sbjct: 575 FNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV-PDTVTYSSLVDGLC 633

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K G++     +  EM+      +V+TYN+LI+G  + G+ +   +L+ +M   GI+ +  
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+  L+ GLCK G+ K A  + +DL       +   Y+ +I G C +   E A  +   M
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             +GC PN   F+++++   + ++ D+A ++L +M+ +
Sbjct: 754 EENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 154/319 (48%), Gaps = 1/319 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  +  L    +V  AL F+ ++       N  +   +++  C++G    A
Sbjct: 58  GYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAA 117

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           ++  + ++     P+V  YNT+I   C   L+S A    + M   GI  NV+T++TLI+G
Sbjct: 118 IKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYG 177

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC  GKL EA  + + M    ++PNV TYN L++   + G  +   S+   ML+  +K +
Sbjct: 178 FCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSN 237

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++TY+ L+ G     + KKA ++   +    + P+  +Y+ +I G C  K  ++A  L+K
Sbjct: 238 VITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFK 297

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            MI S   P    F  ++ +F + + +  A  +   +  K + PD   L+ L +   H G
Sbjct: 298 EMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMG 356

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +      +  K+  RG  P
Sbjct: 357 QITFGFSVLAKILKRGYPP 375



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 136/298 (45%), Gaps = 22/298 (7%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF--D 197
           + T++I++  L K  K K ++S+L  +L                   + C   P VF  +
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVML-------------------KAC-VKPDVFTYN 556

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L   Y    + + A   F  M   G  P + +    ++    S+ VD AL  +KEM + 
Sbjct: 557 TLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            + P+  T + ++   CK G I    ++   M   G    V TYN+LI G C  G L  A
Sbjct: 617 NMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKA 676

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +   N M+  GI+PN  TF  L+ G CK G+L +A  +F ++       +V  YN +I G
Sbjct: 677 IALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYG 736

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + G  E   ++  +M  NG   + +T++ +I  L K+ +  KA  L++ +    L+
Sbjct: 737 HCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 4/314 (1%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V D L K Y H     +A + F +M + G  P + + +  +S L + ER   A     +M
Sbjct: 266 VIDSLCK-YRHED---DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              +I+PNV T N ++ AF K G +  A +++  M      P + TY++LI+G C    L
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A     LM      PNV+T+NTLI GFCK  ++ E   +F EM    +  N VTY TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ Q  + +    ++++M+ +G+  +I+TYN L+ GLCK GK +KA  + + L ++ +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P   TY+ +I G C     E  + L+ S+   G +P+  I+  ++S FC+    + A  
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561

Query: 495 VLLEMLEKCMAPDS 508
           +  +M E    PDS
Sbjct: 562 LFRKMREDGPLPDS 575



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 171/364 (46%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y H K+  +A     QM + G+ P   +    +  L    +   A+     M +  
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             PN+ T  +V++  CK G I+ A  +   ME+     +V  Y+T+I   C       A+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                ME  G++PNVIT+++LI   C   +  +A+R+ S+M    ++PNVVT+N LI+ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       LY+EM++  I  DI TY++LI G C   +  +A ++ + +      PN 
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ LI G C  K  +   +L++ M + G   N   +  L+  F Q  D D A  V  +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M+   + P+ +  + L  GL   GK E AM +F  ++   + P  +     I    + G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520

Query: 559 KESG 562
            E G
Sbjct: 521 VEDG 524



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 183/381 (48%), Gaps = 16/381 (4%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
           S L +   +  R+ D+  LV  ++          F T  H      K   A     +M  
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +    ++ L     +D+A     +M   +I  NV   + V+ + CK    + 
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +F  ME+ G  P+V TY++LIS  CN    S A +  + M +  I PNV+TFN LI 
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F K+GKL EA +++ EM   ++ P++ TY++LING+      +    ++E M+      
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TYN LI G CK  +  +   L +++ +  LV N  TY+ LI G    ++ + A  ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHH 520
           K M+  G  PN   +  L+   C+N   ++A  V+ E L++  M P     + +  G+  
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCK 517

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            GK E    LF  + ++G+ P
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKP 538



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 183/371 (49%), Gaps = 35/371 (9%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  K  +A   F  M     LP I   NK LS++   ++ D+ +   ++M+R  IS N+Y
Sbjct: 62  HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN-------------- 310
           T N++++ FC+   I  A+ +   M  +G+ PS+ T ++L++G+C+              
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 311 ----------------KGLL-----SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                            GL      S A+   + M + G QPN++T+  ++ G CK+G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  + ++M+A  +  NVV Y+T+I+   +  + +   +L+ EM   G++ +++TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  LC   +   A+ L+ D+ +  + PN  T++ALI           A +LY  MI+   
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   +  L++ FC ++  D A  +   M+ K   P+ +  + L +G     + +  ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 530 LFRKMEIRGLL 540
           LFR+M  RGL+
Sbjct: 422 LFREMSQRGLV 432



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/307 (30%), Positives = 148/307 (48%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + SL      D AL  + EM    + PNV T + ++   C       A  +  +M     
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+V T+N LI     +G L  A K  + M K  I P++ T+++LI GFC   +L EA  
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  M + +  PNVVTYNTLING+ +    + G  L+ EM + G+  + +TY  LI G  
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           +      A  + K +  + + PN  TY+ L+ G C     E+A  +++ + RS   P  +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +++   C+    +   ++   +  K + PD II + + SG    G  E A  LFRKM
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566

Query: 535 EIRGLLP 541
              G LP
Sbjct: 567 REDGPLP 573



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 162/319 (50%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           + L + L S ++D A+G +  M ++R  P+++  N ++ A  K+   +  + + + M+ +
Sbjct: 55  EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G   ++ TYN LI+  C +  +SLA+     M K G +P+++T ++L+ G+C   ++ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +  +M      P+ +T+ TLI+G      +    +L + M++ G + +++TY  ++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G    A  L+  ++   +  N   YS +I   C  ++ + A  L+  M   G RPN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+S  C  E +  A+ +L +M+E+ + P+ +  + L       GK   A KL+ 
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354

Query: 533 KMEIRGLLPKGFDKLRTIN 551
           +M  R + P  F     IN
Sbjct: 355 EMIKRSIDPDIFTYSSLIN 373



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 2/255 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + + + F+ L   +    K   A   + +M      P I + +  ++     +R+D 
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ M      PNV T N +++ FCK   I+  VE+F+ M   G + +  TY TLI 
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443

Query: 307 GHCN-KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G    +   +  M FK  M  +G+ PN++T+NTL+ G CK GKL +A  +F  ++ + + 
Sbjct: 444 GFFQARDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P + TYN +I G  + G  E G  L+  +   G+K D++ YN +I G C++G  ++A  L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562

Query: 426 VKDLDKNSLVPNAST 440
            + + ++  +P++ T
Sbjct: 563 FRKMREDGPLPDSGT 577



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 106/222 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++  FN L+    K  K      +  +M+   +S N+ TYN LIN + +     +  +L
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G +  I+T ++L+ G C   +   A  LV  + +    P+  T++ LI G  +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
              +  A  L   M++ GC+PN   + ++++  C+  D D A  +L +M    +  + +I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            S +   L     ++ A+ LF +ME +G+ P        I+C
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 172/350 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++ +L   YA +       D    M + G  P     N   ++      +D A+  + +M
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           ++  +SP+V     ++ A CKLG ++ AV  F  M + G  P++  +N+L+ G C     
Sbjct: 405 KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKW 464

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +F   M   GI+P+V+ FNT++   C KG++ +A R+   M+     P+V++Y TL
Sbjct: 465 EKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL 524

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+  VG  +  A   + ML  G+K D  TYN L+ G C+ G+   A  + +++ +N +
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P   TYS ++ G    +    A +LY +MI SG + N  I+ ++++   +N   D A +
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +   +  K    +    + +   L   G++E AM LF  +   GL+P  F
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVF 694



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 186/415 (44%), Gaps = 11/415 (2%)

Query: 126 FFTWVQTHKPSSLTLET--HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFT  Q  K  +L LE     I  +++T         +++ G+  +   D    +F  ++
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYT-------TVIDGLCKAQVVDRAEGVFQQMI 265

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                 D+    ++ L   Y    K++       +M  +G  P   +    L+ L ++ R
Sbjct: 266 DKGVKPDND--TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A  F+  M R  I PNV    +++H +   G +    ++   M   G  P    +N 
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           + + +  K ++  AM   N M++ G+ P+V+ F  LI   CK G++ +A   F++M    
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V+PN+  +N+L+ G   V   E     Y EML  GI+ D++ +N ++  LC +G+  KA 
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+  +++    P+  +Y+ LI G C+    + A +    M+  G +P++  +  L+  +
Sbjct: 504 RLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           C+    D A  V  EML   + P  +  S +  GL    +   A +L+  M   G
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 17/428 (3%)

Query: 123 SLEFFTWVQTH-KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           +L+ F  + TH +P+S+    H +        R+  ++ES           +L   LF+ 
Sbjct: 33  ALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTES-----------ELVVSLFNR 81

Query: 182 ILYSYRMCDSSPL-VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           ++    +  +  L  + +L   +    +  +   TF  +   G+       N+ L  L D
Sbjct: 82  MIRECTIKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCD 141

Query: 241 SERVDIALG-FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFI--P 296
           ++R+  A+    K M     +P+V + N ++  FC     E A+E+   M +S G    P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V +Y T+I+G   +G +  A      M   GIQPNV+T+ T+I G CK   +  A  +F
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            +M    V P+  TYN LI+GY  +G  +    + EEM  +G+K D  TY +L+  LC  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+ ++A +    + +  + PN + Y  LI G   +        L   M+ +G  P+ HIF
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            ++ + + +    D A  +  +M ++ ++PD +    L   L   G+ + A+  F +M  
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 537 RGLLPKGF 544
            G+ P  F
Sbjct: 442 EGVAPNIF 449



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 153/330 (46%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F QM D G  P  ++ N  +   L   +    +   +EM  + + P+ YT   +++
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G    A   F +M   G  P+V  Y  LI G+  KG LS      NLM +NG+ P
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN +   + KK  + EA  IF++MK   +SP+VV +  LI+   ++G  +     +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M+  G+  +I  +N+L+ GLC   K +KA     ++    + P+   ++ ++   C +
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +A +L   M R G RP+   +  L+   C     D AA+ L  ML   + PD    
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L  G    G+ + A  +FR+M   G+ P
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITP 586



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 165/358 (46%), Gaps = 6/358 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + +  +   +    +   A + F +M D G  P + +    +  L  ++ VD 
Sbjct: 197 RSCPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G +++M    + P+  T N ++H +  +G  +  V + + M + G  P   TY +L++
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN G    A  F + M + GI+PNV  +  LI G+  KG L E + + + M    +SP
Sbjct: 317 YLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +   +N +   Y +    +    ++ +M + G+  D++ + ALI  LCK G+   A    
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + PN   +++L+ G C     E+A + Y  M+  G RP+   F  ++   C  
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 487 EDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
               + A+ L++++E+    PD I  + L  G  HC  G+ + A K    M   GL P
Sbjct: 497 GQVMK-AQRLIDLMERVGTRPDVISYTTLIGG--HCLVGRIDEAAKSLDVMLSVGLKP 551



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 161/379 (42%), Gaps = 72/379 (18%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F+++F  YA +     A   F +M+  G  P + +    + +L    RVD A+  + +M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVE--------------VFKN------------ 288
               ++PN++  N +++  C +   E+A E              VF N            
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 289 ---------MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                    ME +G  P V +Y TLI GHC  G +  A K  ++M   G++P+  T+NTL
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG- 398
           + G+C+ G++ +A  +F EM    ++P VVTY+T+++G            LY  M+ +G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 399 ----------------------------------IKVDILTYNALILGLCKEGKTKKAAY 424
                                              +++I T+N +I  L K G+ + A +
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAF-QLYKSMIRSGCRPNKHIFEMLMSTF 483
           L   +    LVP+  TY  LI    + +     F  L+ +M +SG  PN  +   L+   
Sbjct: 680 LFATISSYGLVPDVFTY-CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 484 CQNEDFDRAAEVLLEMLEK 502
               D  RA   L ++ EK
Sbjct: 739 LHRGDITRAGAYLSKLDEK 757



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 4/233 (1%)

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN-SEMG 387
           + P++ T++ LI  FC+ G+L      F  +  +    N +  N L+ G        E  
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA---YLVKDLDKNSLVPNASTYSAL 444
             L + M   G   D+++YN L+ G C E + ++A    +++ D    S  PN  +Y+ +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G       ++A+ L+  M+  G +PN   +  ++   C+ +  DRA  V  +M++K +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            PD+   + L  G    GK +  +++  +M   GL P  +     +N    NG
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 2/240 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A  +   M   G  P   + N  L     + R+D A G ++EM RN I+P V T +
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEK 326
            ++H          A E++ NM + G   ++  YN +++G      +  A K F++L  K
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +  Q  + TFN +I    K G+  +A  +F+ + +  + P+V TY  +     + G  E 
Sbjct: 653 D-FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L+  M ++G   +    NAL+  L   G   +A   +  LD+ +    AST + LI+
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 70/170 (41%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++F  A + +  M   G    I   N  L+ L  +  VD A   ++ +        + T 
Sbjct: 602 RRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTF 661

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++ A  K G  E A+ +F  + S G +P V TY  +      +G L       + MEK
Sbjct: 662 NIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEK 721

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           +G  PN    N L+     +G +  A    S++   N S    T   LI+
Sbjct: 722 SGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 185/374 (49%), Gaps = 3/374 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G  +S +    +++ + IL  Y   D     ++ L   +    +  NA     +M+ 
Sbjct: 110 LIKGFFNSRNIGKATRVME-ILERYGKPDV--FAYNALISGFIKANQLENANRVLDRMKS 166

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GFLP + + N  + S     ++D+AL  ++E+ ++   P V T  +++ A    G I+ 
Sbjct: 167 RGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDV 226

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++   M S G  P   TYN +I G C + ++  A +    +   G +P++IT+N L+ 
Sbjct: 227 AMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLR 286

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
               +GK  E  ++ SEM +    PNVVT++ LI    + G  E   +L   M   G+K 
Sbjct: 287 TLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKP 346

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D   Y+ LI G C+EG+   A   ++ +  +  +P+   Y+ ++ G C    +++A +++
Sbjct: 347 DAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVF 406

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + +   GC PN   +  L S    + D  RA E++L++L + + PD I  + L S L   
Sbjct: 407 EKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRD 466

Query: 522 GKDELAMKLFRKME 535
           G  + A++L   M+
Sbjct: 467 GMVDEAIELLVDMQ 480



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 170/348 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++  ++  R K   A + F ++      P + +    + + +    +D+A+    E
Sbjct: 174 VTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDE 233

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+  T N ++   CK  ++++A E+ +++ S G  P + TYN L+    ++G 
Sbjct: 234 MLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGK 293

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S   K  + M   G +PNV+T + LI   C+ GK+ EA  +   MK   + P+   Y+ 
Sbjct: 294 WSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDP 353

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G+ + G  ++     E M+ +G   DI+ YN ++ GLC+ GK  +A  + + LD+  
Sbjct: 354 LIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVG 413

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN S+Y+ L +      +  RA ++   ++  G  P++  +  L+S  C++   D A 
Sbjct: 414 CPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E+L++M      P+ +  + +  GL    +   A+++   M  +G  P
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQP 521



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 1/359 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L K + + +    AT     +  YG  P + + N  +S  + + +++ A      M+   
Sbjct: 110 LIKGFFNSRNIGKATRVMEILERYG-KPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+V T N+++ +FC  G ++ A+E+F+ +      P+V TY  LI      G + +AM
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAM 228

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M   G++P+ +T+N +I G CK+  + +A  +   + +    P+++TYN L+   
Sbjct: 229 KLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTL 288

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G    G  L  EM+  G K +++T++ LI  LC++GK ++A  L++ + +  L P+A
Sbjct: 289 LSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDA 348

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
             Y  LI G C     + A +  + MI  GC P+   +  +M+  C+    D+A EV  +
Sbjct: 349 YCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEK 408

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           + E    P+    + L+S L   G    A+++  K+  +G+ P        I+C   +G
Sbjct: 409 LDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDG 467



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 3/315 (0%)

Query: 166 ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL 225
           ILD    D+  KL D +L   +  +   L ++ + +          A +    +   G  
Sbjct: 219 ILDG-GIDVAMKLLDEMLS--KGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCK 275

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I + N  L +LL   +         EM      PNV T ++++   C+ G +E AV +
Sbjct: 276 PDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNL 335

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            ++M+  G  P    Y+ LI+G C +G L LA +F   M  +G  P+++ +NT++ G C+
Sbjct: 336 LRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCR 395

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK  +A  +F ++      PNV +YNTL +     G+      +  ++L  GI  D +T
Sbjct: 396 TGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEIT 455

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN+LI  LC++G   +A  L+ D+      PN  +Y+ ++ G C    +  A ++  +M 
Sbjct: 456 YNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMT 515

Query: 466 RSGCRPNKHIFEMLM 480
             GC+PN+  + +L+
Sbjct: 516 EKGCQPNETTYILLI 530



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 157/359 (43%), Gaps = 2/359 (0%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
            DL  ++F+ +L     C+ + + + +L +          A     +M   G  P   + 
Sbjct: 189 LDLALEIFEELLKDN--CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTY 246

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +  +     VD A    + +      P++ T N+++      G      ++   M S
Sbjct: 247 NAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMIS 306

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G  P+V T++ LI   C  G +  A+     M++ G++P+   ++ LI GFC++G+L  
Sbjct: 307 IGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDL 366

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A      M +    P++V YNT++ G  + G ++    ++E++   G   ++ +YN L  
Sbjct: 367 ATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFS 426

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            L   G   +A  ++  L    + P+  TY++LI+  C     + A +L   M     RP
Sbjct: 427 ALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRP 486

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           N   + +++   C+    + A EVL  M EK   P+      L  G+   G    AM+L
Sbjct: 487 NVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 114/241 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +   +L  T     K   A +    M++ G  P     +  ++      R+D+A 
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F + M  +   P++   N +M   C+ G  ++A+EVF+ ++ +G  P+V++YNTL S  
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
            + G    A++    +   GI P+ IT+N+LI   C+ G + EA  +  +M++    PNV
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNV 488

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YN ++ G  +V  +     +   M   G + +  TY  LI G+   G   +A  L   
Sbjct: 489 VSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANS 548

Query: 429 L 429
           L
Sbjct: 549 L 549



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 21/242 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGI----LDSDSF---------------DLPSKLFDSI 182
           THSI++  L ++ K + + ++LR +    L  D++               DL ++  + +
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           +     C    + ++ +        K   A + F ++ + G  P + S N   S+L  S 
Sbjct: 375 ISD--GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
               AL    ++    I P+  T N ++   C+ G+++ A+E+  +M+S  + P+V +YN
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYN 492

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++ G C     + A++    M + G QPN  T+  LI G    G   EA  + + +   
Sbjct: 493 IILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGM 552

Query: 363 NV 364
           N 
Sbjct: 553 NA 554


>gi|356523854|ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 162/315 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF+++        + R   D F  +R  G    I +    +  L  +E  +     Y ++
Sbjct: 361 VFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQL 420

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             + +  NV++ NM+++ FC+  +++ A E F++M+  G +P++ T+NTLI+GHC  G +
Sbjct: 421 ISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAI 480

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A K    + +NG++P++ TF++++ G C+  +  EA   F+EM    ++PN V YN L
Sbjct: 481 DKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNIL 540

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I     +G+      L   M + GI  D  +YNALI   C+  K +KA  L   + ++ L
Sbjct: 541 IRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGL 600

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  TYSA I         E A +++ SM  +GC P+ +I  +++    Q E  + A  
Sbjct: 601 NPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQN 660

Query: 495 VLLEMLEKCMAPDSI 509
           ++    +K ++ +SI
Sbjct: 661 IIERCRQKGISLNSI 675



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 147/316 (46%), Gaps = 1/316 (0%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKE-MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           +C+  L  L ++      + F +  + R    P     N+VM    K   +    +VF+ 
Sbjct: 325 ACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMACLVKGAELRETCDVFEI 384

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +   G    +  Y  LI             +    +  +G+  NV ++N +I  FC+   
Sbjct: 385 LRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLISNVFSYNMIINCFCRAKL 444

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A+  F +M+   V PN+VT+NTLING+ + G  +    L E +L NG+K DI T+++
Sbjct: 445 MDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSS 504

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           ++ GLC+  +T++A     ++ +  + PNA  Y+ LI   C   +  R+ +L + M + G
Sbjct: 505 IVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEG 564

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+ + +  L+  FC+    ++A ++   M    + PD+   S     L   G+ E A 
Sbjct: 565 ISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSESGRLEEAK 624

Query: 529 KLFRKMEIRGLLPKGF 544
           K+F  ME  G  P  +
Sbjct: 625 KMFYSMEANGCSPDSY 640



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 139/288 (48%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P     N  ++ L+    +      ++ +R+  +   +     ++    K    E  
Sbjct: 354 GYFPGNSVFNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEG 413

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             V+  + S G I +V +YN +I+  C   L+  A +    M+  G+ PN++TFNTLI G
Sbjct: 414 DRVYGQLISDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLING 473

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G + +A ++   +    + P++ T++++++G  Q+  +E     + EM+  GI  +
Sbjct: 474 HCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPN 533

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            + YN LI  LC  G   ++  L++ + K  + P+  +Y+ALI   C     E+A +L+ 
Sbjct: 534 AVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFD 593

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           SM RSG  P+ + +   +    ++   + A ++   M     +PDS I
Sbjct: 594 SMSRSGLNPDNYTYSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYI 641



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 184/442 (41%), Gaps = 42/442 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++  ++ S+S DL    F  +  +   C +    ++ L            A     QM+
Sbjct: 184 ALIDALVKSNSIDLAYLKFQQM--AADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMK 241

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P + +    +     + RVD A G ++ M+ + + PN  T+  ++H   +     
Sbjct: 242 DKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPS 301

Query: 281 RAVEVFKNM-------------------------ESM---------------GFIPSVTT 300
           +A+E+                              SM               G+ P  + 
Sbjct: 302 KALELLSEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSV 361

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           +N +++       L        ++ K G++  +  +  LI    K     E +R++ ++ 
Sbjct: 362 FNVVMACLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLI 421

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           +  +  NV +YN +IN + +    +  +  + +M   G+  +++T+N LI G CK+G   
Sbjct: 422 SDGLISNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAID 481

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           KA  L++ L +N L P+  T+S+++ G C  K +E A + +  MI  G  PN  I+ +L+
Sbjct: 482 KARKLLESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILI 541

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + C   D  R+ ++L  M ++ ++PD+   + L        K E A KLF  M   GL 
Sbjct: 542 RSLCTIGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601

Query: 541 PKGFDKLRTINCAPENGEKESG 562
           P  +     I    E+G  E  
Sbjct: 602 PDNYTYSAFIEALSESGRLEEA 623



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 117/520 (22%), Positives = 211/520 (40%), Gaps = 94/520 (18%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS 176
           Q++   +++F +W+    P   TL  H+ V H   +N   +   ++L       S DL  
Sbjct: 85  QQNPSHAIKFHSWLSHVNP---TLAAHNSV-HRALRNTLHRKGPALL-------SVDLLR 133

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           +L +     +R+ +    +   L  ++        +   FCQ+   G  P     N  + 
Sbjct: 134 ELRN---LGFRVTED---LLCALLASWGRLGLANYSAHVFCQISFLGLSPTTRLYNALID 187

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +L+ S  +D+A   +++M  +    + +T N ++H  CK+G+++ A+ + + M+  G  P
Sbjct: 188 ALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEALRLVRQMKDKGHFP 247

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TY  LI G C    +  A      M+ +G+ PN  T   L+ G  +     +A  + 
Sbjct: 248 NVFTYTMLIEGFCIASRVDEAFGVFETMKDSGVYPNEATVRALVHGVFRCVDPSKALELL 307

Query: 357 SE-----------------------MKATNVSPNVVTYNTLINGYGQV--GNSEM----- 386
           SE                       +   +++  +V +   + G G    GNS       
Sbjct: 308 SEFLDREQEQERVHFMLACDTVLYCLANNSMAKEMVVFLRRVLGRGGYFPGNSVFNVVMA 367

Query: 387 ----GASLYE-----EMLR-NGIKVDILTYNALILGL----------------------- 413
               GA L E     E+LR  G+K  I  Y ALI  L                       
Sbjct: 368 CLVKGAELRETCDVFEILRKQGVKAGIGAYLALIEVLYKNEWREEGDRVYGQLISDGLIS 427

Query: 414 ------------CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
                       C+      A+   +D+    +VPN  T++ LI G C     ++A +L 
Sbjct: 428 NVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLL 487

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           +S++ +G +P+   F  ++   CQ +  + A E   EM+E  + P+++I + L   L   
Sbjct: 488 ESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCTI 547

Query: 522 GKDELAMKLFRKMEIRGLLPK--GFDKLRTINCAPENGEK 559
           G    ++KL R+M+  G+ P    ++ L  I C     EK
Sbjct: 548 GDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEK 587



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 114/237 (48%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+   ++++   +   K   NA++ F  M+  G +P + + N  ++       +D A   
Sbjct: 427 SNVFSYNMIINCFCRAKLMDNASEAFRDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKL 486

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            + +  N + P+++T + ++   C++   E A+E F  M   G  P+   YN LI   C 
Sbjct: 487 LESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCT 546

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G ++ ++K    M+K GI P+  ++N LI  FC+  K+ +A ++F  M  + ++P+  T
Sbjct: 547 IGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYT 606

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           Y+  I    + G  E    ++  M  NG   D    N +I  L ++   ++A  +++
Sbjct: 607 YSAFIEALSESGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIE 663


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 163/317 (51%), Gaps = 1/317 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGF-YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           P +   N  ++  + + R++ A  F Y +M  N   P+V+T + +++  CK G+   A+E
Sbjct: 344 PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALE 403

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +  +M++ G  P++ TY  LI G C KG L  A      M   G   N + +N LI   C
Sbjct: 404 LVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALC 463

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K GK+HEA  +F EM +    P++ T+N+LI G  +V   E   +LY +M+  G+  + +
Sbjct: 464 KHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSV 523

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+N LI    + G+ ++A  LV D+       +  TY+ LI   C     E+   L++ M
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           IR G  P+     +L++ FC       A E + +M+ +  +PD +  + L +GL   G+ 
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643

Query: 525 ELAMKLFRKMEIRGLLP 541
           + A+ LF K++  G+ P
Sbjct: 644 QEALNLFEKLQAEGIQP 660



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 210/481 (43%), Gaps = 52/481 (10%)

Query: 93  DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
           D K+L      +TPF++   LL++  D   S+E F W    K    +   + +++  L  
Sbjct: 58  DLKELRRSFNKITPFQLCK-LLELPLDVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGA 116

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNA 212
              FK  + +L  + +           + I++   +       F L+ K Y        A
Sbjct: 117 AAGFKVIDRLLLQMKE-----------EGIVFRESL-------FILIMKYYGRAGLPGQA 158

Query: 213 TDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           T     M+  Y   P   S N  L  L+      +A   + +M    +SPN YT  +VM 
Sbjct: 159 TRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMK 218

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A C +  ++ A  + ++M   G +P+   Y TLI     +  +  A+K    M   G  P
Sbjct: 219 ALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPP 278

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEM--------------------KATNV------- 364
           +V TFNT+I+GFC+  ++ E  ++   M                    K   +       
Sbjct: 279 DVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALL 338

Query: 365 ----SPNVVTYNTLINGYGQVGN-SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                PNVV +NTL+NG+ + G  +E  A +Y++M+ NG   D+ T++ L+ GLCK+G  
Sbjct: 339 SKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLF 398

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  LV D+D     PN +TY+ LI G C +   E A  + + M+  G   N   +  L
Sbjct: 399 GSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNAL 458

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +S  C++     A ++  EM  K   PD    + L  GL    + E A+ L+R M + G+
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518

Query: 540 L 540
           +
Sbjct: 519 I 519



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 165/348 (47%), Gaps = 3/348 (0%)

Query: 196 FDLLFKTYAHRKKFRNATD-TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           F+ L   +    +   AT   + +M + G++P + + +  ++ L        AL    +M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PN+ T  +++  FCK G +E A  + + M + GF  +   YN LIS  C  G +
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKI 468

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A+     M   G +P++ TFN+LIFG C+  ++ +A  ++ +M    V  N VT+NTL
Sbjct: 469 HEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTL 528

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+ + + G  +    L  +ML  G  +D +TYN LI  LCK G  +K   L +++ +  L
Sbjct: 529 IHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGL 588

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  T + LI G C       A +  + MI  G  P+   +  L++  C+      A  
Sbjct: 589 TPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGK-DELAMKLFRKMEIRGLLP 541
           +  ++  + + PDSI  + L   L   G  D+    L+R +E  G +P
Sbjct: 649 LFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVE-NGFVP 695



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 173/383 (45%), Gaps = 16/383 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD---- 197
           T+  ++H L K  +   ++++L  +   +     + L +  + + R+ +++  V+D    
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHF-NTLVNGFVRNGRLNEATAFVYDKMIN 375

Query: 198 -----------LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                       L      +  F +A +    M   G  P + +    +       +++ 
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    +EM     S N    N ++ A CK G I  A+++F  M S G  P + T+N+LI 
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIF 495

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +  A+     M   G+  N +TFNTLI  F ++G++ EA ++ ++M       
Sbjct: 496 GLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPL 555

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TYN LI    + G  E G  L+EEM+R G+   I+T N LI G C  GK   A   +
Sbjct: 556 DEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFM 615

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +D+      P+  TY++LI G C R   + A  L++ +   G +P+   +  L+   C+ 
Sbjct: 616 RDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCRE 675

Query: 487 EDFDRAAEVLLEMLEKCMAPDSI 509
             FD A  +L   +E    P+ +
Sbjct: 676 GAFDDACFLLYRGVENGFVPNDV 698



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 152/316 (48%), Gaps = 18/316 (5%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T++I++    K  + + +  ILR +L +  F L                 + + ++ L
Sbjct: 417 LNTYTILIDGFCKKGQLEEAGLILREML-TKGFSL-----------------NTVGYNAL 458

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                   K   A D F +M   G  P I + N  +  L   + ++ AL  Y++M    +
Sbjct: 459 ISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGV 518

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
             N  T N ++HAF + G I+ A+++  +M   G      TYN LI   C  G +   + 
Sbjct: 519 IANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLG 578

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M + G+ P++IT N LI GFC  GK+H A     +M     SP++VTYN+LING  
Sbjct: 579 LFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLC 638

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  +   +L+E++   GI+ D +TYN LI  LC+EG    A +L+    +N  VPN  
Sbjct: 639 KRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDV 698

Query: 440 TYSALITGQCVRKNSE 455
           T++ L+     + NSE
Sbjct: 699 TWNILVYNFGKQSNSE 714



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 144/296 (48%), Gaps = 2/296 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   + +L   +  + +   A     +M   GF       N  +S+L    ++  AL
Sbjct: 413 CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEAL 472

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM      P+++T N ++   C++  +E A+ ++++M   G I +  T+NTLI   
Sbjct: 473 DMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAF 532

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G +  A+K  N M   G   + IT+N LI   CK G + +   +F EM    ++P++
Sbjct: 533 LRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSI 592

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +T N LING+   G          +M+  G   DI+TYN+LI GLCK G+ ++A  L + 
Sbjct: 593 ITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEK 652

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERA-FQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L    + P++ TY+ LI   C     + A F LY+  + +G  PN   + +L+  F
Sbjct: 653 LQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG-VENGFVPNDVTWNILVYNF 707


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 20/371 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I+L    K   +K +  +L  + D                  + C    + ++++  
Sbjct: 69  TYTILLEATCKRSGYKQAMKLLDEMRD------------------KGCTPDIVTYNVVVN 110

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 +  +A +    +  YG  P   S N  L  L  +ER + A     EM +    P
Sbjct: 111 GICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPP 170

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV T NM++   C+ G++E A+EV + +   G  P+  +YN L+   C +  +  AM F 
Sbjct: 171 NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFL 230

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           +LM   G  P+++++NTL+   C+ G++  A  +  ++K    +P +++YNT+I+G  + 
Sbjct: 231 DLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA 290

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G ++    L  EM+  G++ DI+TY+ +  GLC+E + + A      +    + PN   Y
Sbjct: 291 GKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLY 350

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           +A+I G C R+ +  A  L+  MI +GC PN+  + +L+           A ++L E+  
Sbjct: 351 NAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410

Query: 502 KCMAPDSIILS 512
           +  A + I+L 
Sbjct: 411 R--AGEEILLD 419



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 169/362 (46%), Gaps = 2/362 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG+           + D +L   R C    + + +L +    R  ++ A     +MR
Sbjct: 37  TLIRGLCGRGRTANALAVLDEMLR--RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P I + N  ++ +    RVD A+ F K +      PN  + N+V+   C     E
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+   M   G  P+V T+N LIS  C KGL+  A++    + K G  PN +++N L+
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK+ K+ +A      M +    P++V+YNTL+    + G  ++   L  ++   G  
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             +++YN +I GL K GKTK+A  L+ ++    L P+  TYS +  G C     E A + 
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G RPN  ++  ++   C+  +   A ++   M+     P+    + L  GL +
Sbjct: 335 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 394

Query: 521 CG 522
            G
Sbjct: 395 EG 396



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 151/310 (48%), Gaps = 3/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++    + ++D A     EM    + P+ YT N ++   C  G    A+ V   M  
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
              +P V TY  L+   C +     AMK  + M   G  P+++T+N ++ G C++G++ +
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A      + +    PN V+YN ++ G       E    L  EM + G   +++T+N LI 
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC++G  + A  +++ + K    PN+ +Y+ L+   C +K  ++A      M+  GC P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  L++  C++ + D A E+L ++ +K  AP  I  + +  GL   GK + A++L 
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300

Query: 532 RKMEIRGLLP 541
            +M  +GL P
Sbjct: 301 NEMVSKGLQP 310



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 159/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +    R +  NA     +M     +P + +    L +         A+    EMR
Sbjct: 35  YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +P++ T N+V++  C+ G ++ A+E  KN+ S G  P+  +YN ++ G C      
Sbjct: 95  DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M + G  PNV+TFN LI   C+KG +  A  +  ++     +PN ++YN L+
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + +    +   +  + M+  G   DI++YN L+  LC+ G+   A  L+  L      
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   +Y+ +I G      ++ A +L   M+  G +P+   +  + +  C+ +  + A   
Sbjct: 275 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 334

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++ +  + P++++ + +  GL    +   A+ LF  M   G +P
Sbjct: 335 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 380



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/242 (30%), Positives = 118/242 (48%), Gaps = 3/242 (1%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +++G+C  G L  A   + L+ +  ++P+  T+NTLI G C +G+   A  +  EM
Sbjct: 2   AYNAMVAGYCGAGQLDAA---RRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P+VVTY  L+    +    +    L +EM   G   DI+TYN ++ G+C+EG+ 
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A   +K+L      PN  +Y+ ++ G C  +  E A +L   M + GC PN   F ML
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +S  C+    + A EVL ++ +    P+S+  + L        K + AM     M  RG 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 540 LP 541
            P
Sbjct: 239 YP 240



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + +N ++ G+C  G+L  A R+ +EM    V P+  TYNTLI G    G +    ++ +E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           MLR     D++TY  L+   CK    K+A  L+ ++      P+  TY+ ++ G C    
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + A +  K++   GC PN   + +++   C  E ++ A E++ EM +K   P+ +  + 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L S L   G  E A+++  ++   G  P
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTP 205


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 162/322 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++++        +  +A +    +  YG  P   S N  L  L  +ER + A 
Sbjct: 23  CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 82

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM +    PNV T NM++   C+ G++E A+EV + +   G  P+  +YN L+   
Sbjct: 83  ELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAF 142

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  AM F +LM   G  P+++++NTL+   C+ G++  A  +  ++K    +P +
Sbjct: 143 CKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVL 202

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++YNT+I+G  + G ++    L  EM+  G++ DI+TY+ +  GLC+E + + A      
Sbjct: 203 ISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGK 262

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + PN   Y+A+I G C R+ +  A  L+  MI +GC PN+  + +L+        
Sbjct: 263 VQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL 322

Query: 489 FDRAAEVLLEMLEKCMAPDSII 510
              A ++L E+  + +   S+I
Sbjct: 323 IKEARDLLDELCSRGVVRKSLI 344



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 162/339 (47%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
           R  ++ A     +MRD G  P I + N  ++ +    RVD A+ F K +      PN  +
Sbjct: 5   RSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVS 64

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N+V+   C     E A E+   M   G  P+V T+N LIS  C KGL+  A++    + 
Sbjct: 65  YNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP 124

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           K G  PN +++N L+  FCK+ K+ +A      M +    P++V+YNTL+    + G  +
Sbjct: 125 KYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVD 184

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           +   L  ++   G    +++YN +I GL K GKTK+A  L+ ++    L P+  TYS + 
Sbjct: 185 VAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIA 244

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C     E A + +  +   G RPN  ++  ++   C+  +   A ++   M+     
Sbjct: 245 AGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM 304

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           P+    + L  GL + G  + A  L  ++  RG++ K  
Sbjct: 305 PNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 343



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 131/270 (48%)

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A CK    ++A+++   M   G  P + TYN +++G C +G +  A++F   +   G +P
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +++N ++ G C   +  +A  +  EM      PNVVT+N LI+   + G  E    + 
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E++ + G   + L+YN L+   CK+ K  KA   +  +      P+  +Y+ L+T  C  
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + A +L   +   GC P    +  ++    +      A E+L EM+ K + PD I  
Sbjct: 181 GEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITY 240

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S + +GL    + E A++ F K++  G+ P
Sbjct: 241 STIAAGLCREDRIEDAIRAFGKVQDMGIRP 270


>gi|357505557|ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498082|gb|AES79285.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 200/446 (44%), Gaps = 59/446 (13%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHK--PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           L+  Q D   SL+ F   Q H   P S   +T+  +   L+K R F   ES+L G+  S 
Sbjct: 55  LISRQHDPHFSLQIFLHAQNHHKPPFSHNPQTYQAIFLKLSKFRCFSEIESLLAGLRSSP 114

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
                             C   P+V   + + Y    K   A  TF ++  +G  P + S
Sbjct: 115 P---------------HCCGEEPIV--TVIRGYGLAGKPVRALKTFLRIESFGIRPSVRS 157

Query: 231 CNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
            N  L+SL+ ++R  +A   +K    R R+ PNV + N+++ A CK   +E AV+V   M
Sbjct: 158 INALLNSLVQNKRYRLAFLVFKNCGERFRVLPNVVSCNILLKALCKGNEVEVAVKVLDEM 217

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
             MG +P+V +Y T++ G   +G +  AMK F+ ++++ G  P+V ++  L+ GFC+ GK
Sbjct: 218 PGMGLVPNVVSYTTVLGGFVWRGDMDGAMKVFREVLDR-GWSPDVTSYTVLVDGFCRLGK 276

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI--------- 399
           L +A R+   M+   V PN VTY  +I  Y +   S    +L E+M+   +         
Sbjct: 277 LVDAIRVMDIMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCK 336

Query: 400 KVDIL---------------------------TYNALILGLCKEGKTKKAAYLVKDLDKN 432
            VD+L                             + LI  LCK+GK  +A  +  +  K 
Sbjct: 337 VVDLLCEEGNVEKACEMWRMVSRKNCGLNGAVVVSTLIHWLCKKGKVLEARNVFDEFGKG 396

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           S V +  TY+ LI G C       A +L+  M+  G  PN   + ML+  FC+  +    
Sbjct: 397 S-VASLLTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEG 455

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGL 518
             VL EMLE    P+    + L  G+
Sbjct: 456 IRVLEEMLENRCLPNKSTYTILIDGI 481



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 126/265 (47%), Gaps = 2/265 (0%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKN 327
           V+  +   G   RA++ F  +ES G  PSV + N L++         LA + FKN  E+ 
Sbjct: 126 VIRGYGLAGKPVRALKTFLRIESFGIRPSVRSINALLNSLVQNKRYRLAFLVFKNCGERF 185

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PNV++ N L+   CK  ++  A ++  EM    + PNVV+Y T++ G+   G+ +  
Sbjct: 186 RVLPNVVSCNILLKALCKGNEVEVAVKVLDEMPGMGLVPNVVSYTTVLGGFVWRGDMDGA 245

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++ E+L  G   D+ +Y  L+ G C+ GK   A  ++  ++ N + PN  TY  +I  
Sbjct: 246 MKVFREVLDRGWSPDVTSYTVLVDGFCRLGKLVDAIRVMDIMEDNGVEPNEVTYGVMIQA 305

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-CMAP 506
            C  K S  A  L + MI         +   ++   C+  + ++A E+   +  K C   
Sbjct: 306 YCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEGNVEKACEMWRMVSRKNCGLN 365

Query: 507 DSIILSELYSGLHHCGKDELAMKLF 531
            ++++S L   L   GK   A  +F
Sbjct: 366 GAVVVSTLIHWLCKKGKVLEARNVF 390



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 15/340 (4%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  ++L G +     D   K+F  +L      D +   + +L   +    K  +A     
Sbjct: 228 SYTTVLGGFVWRGDMDGAMKVFREVLDRGWSPDVTS--YTVLVDGFCRLGKLVDAIRVMD 285

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M D G  P   +    + +    ++   A+   ++M    +         V+   C+ G
Sbjct: 286 IMEDNGVEPNEVTYGVMIQAYCKEKKSGEAVNLIEDMIAKDLVVGSELCCKVVDLLCEEG 345

Query: 278 IIERAVEVFK--NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK--NGIQPNV 333
            +E+A E+++  + ++ G   +V   +TLI   C KG +   ++ +N+ ++   G   ++
Sbjct: 346 NVEKACEMWRMVSRKNCGLNGAVVV-STLIHWLCKKGKV---LEARNVFDEFGKGSVASL 401

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T+NTLI G C+ G+L EA R++ +M    V+PN  TYN LI G+ +VGN++ G  + EE
Sbjct: 402 LTYNTLIAGLCEGGELCEAARLWDDMVEKGVAPNAFTYNMLIKGFCKVGNAKEGIRVLEE 461

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ML N    +  TY  LI G+   G  K+    V  L  ++ V +A  ++  +       N
Sbjct: 462 MLENRCLPNKSTYTILIDGILLLGGMKQEINKVVSLAMSTGV-DADLWNIFVKPVVGNDN 520

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTF---CQNEDFD 490
              A +L + ++ +   P  HIF   + TF     N  FD
Sbjct: 521 GGEA-ELDRILLENKAEPALHIFCHCIVTFSLRIWNAPFD 559


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 3/376 (0%)

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
           + S+++G     + D    LF+ I         + + + +L +   +      A++ + Q
Sbjct: 368 ATSLMKGYCAQGNLDSALNLFNKITEDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQ 425

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + N  L   L +   + A   + E     ++ N++T N++M   CK G 
Sbjct: 426 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGK 484

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A  +  NM + G +P+V +YN +I GHC KG + +A    + M    ++PNV+T++ 
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 544

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G  KKG   +A  +F +M + N++P   T+NT+ING  +VG         +  L  G
Sbjct: 545 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 604

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                +TYN+++ G  KEG    A  + +++ +  + PN  TY++LI G C     + A 
Sbjct: 605 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +    M   G   +   +  L+  FC+  D + A ++  E+LE  ++P+ I+ + + SG 
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724

Query: 519 HHCGKDELAMKLFRKM 534
                 E A+  ++KM
Sbjct: 725 RDLNNMEAALVWYKKM 740



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 2/347 (0%)

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           + D+ S +F  +L   R    + + + +L      +     A D F QM      P   +
Sbjct: 519 NMDMASSVFSDMLA--RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT 576

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  ++ L    ++  A    K        P+  T N ++  F K G I+ A+ V++ M 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P+V TY +LI+G C    + LA+K ++ M + G++ +V  ++ LI GFCK+  + 
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +F E+    +SPN + YN++I+G+  + N E     Y++M+ + I  D+ TY  LI
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GL KEG+   A+ L  ++    +VP+  T+  L+ G C +   E A ++ + M R    
Sbjct: 757 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           P+  I+  L++ + +  +   A  +  EML++ + PD +    L +G
Sbjct: 817 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 3/302 (0%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           DSE+   AL  + +M    I+P  +T N +++  CK+G +  A +  KN    GFIPS  
Sbjct: 554 DSEK---ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYN+++ G   +G +  A+     M + G+ PNV+T+ +LI GFCK  ++  A +   EM
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   +  +V  Y+ LI+G+ +  + E    L+ E+L  G+  + + YN++I G       
Sbjct: 671 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 730

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A    K +  + +  +  TY+ LI G         A  LY  M+  G  P+   F +L
Sbjct: 731 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 790

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           ++  C     + A ++L EM  K M P  +I + L +G    G  + A  L  +M  RGL
Sbjct: 791 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 850

Query: 540 LP 541
           +P
Sbjct: 851 VP 852



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 210/482 (43%), Gaps = 33/482 (6%)

Query: 105 TPFRVKHV---LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKS-SE 160
           TP    HV   LL    D   +L +F   +T +     ++ + ++LHIL ++ +    + 
Sbjct: 96  TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 155

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDS--SPLVFDLLFKTYAHRKKFRNATDTFCQ 218
            +L   +  DS   P    D ++   +  D      VF+ L   Y    +  NA D F  
Sbjct: 156 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 215

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M     +P +   N  L++L+    +      Y +M    I  + +T+++++ A  K G 
Sbjct: 216 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 275

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A E F+  +  G       Y+ +I   C K   +L ++    M++ G  P+  TF +
Sbjct: 276 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 335

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I     +G + EA R+  EM       N+V   +L+ GY   GN +   +L+ ++  +G
Sbjct: 336 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 395

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  + +TY+ LI G C  G  +KA+ L   +  N + P+    ++L+ G       E A 
Sbjct: 396 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 455

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L+   +  G   N   + ++MS  C+    D A  +L  M+ + M P+ +  +++  G 
Sbjct: 456 KLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG- 513

Query: 519 HHC--GKDELAMKLFRKMEIRGLLP--------------KG--------FDKLRTINCAP 554
            HC  G  ++A  +F  M  R L P              KG        FD++ ++N AP
Sbjct: 514 -HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 572

Query: 555 EN 556
            +
Sbjct: 573 TD 574



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 130/257 (50%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ +   +       +A   + +M ++G  P + +    ++    S R+D+AL   
Sbjct: 608 SCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTR 667

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EMR   +  +V   + ++  FCK   +E A ++F  +  +G  P+   YN++ISG  + 
Sbjct: 668 DEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDL 727

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  A+ +   M  + I  ++ T+ TLI G  K+G+L  A+ ++ EM +  + P+++T+
Sbjct: 728 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITF 787

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + L+NG    G  E    + EEM R  +   +L YN LI G  +EG  K+A  L  ++  
Sbjct: 788 HVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847

Query: 432 NSLVPNASTYSALITGQ 448
             LVP+  TY  LI G+
Sbjct: 848 RGLVPDDVTYDILINGK 864


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 178/361 (49%), Gaps = 8/361 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +  +F  + + Y    +  +A   F +M  +   P  ++    L  L++   V  A+
Sbjct: 81  CMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAI 140

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           GFY+EMR   I  +V +LN+++ A CK    ++ A+ +F+ M + G  P   TY TLI+G
Sbjct: 141 GFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLING 200

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +S A +    ME+ G   +V+T+ +LI G C+   L EA  +  EMK  ++ PN
Sbjct: 201 LCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPN 260

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V TY++L++G  + G+S     L E M +     +++TY+ LI GLCKE K ++A  ++ 
Sbjct: 261 VFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILD 320

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK-------HIFEMLM 480
            +    L PNA  Y  +I+G C   + + A      M+  G  PN+        +  M++
Sbjct: 321 RMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVV 380

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C N D  RA ++ L M  +C++ +      L       G    A ++  +M + G +
Sbjct: 381 QGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCI 440

Query: 541 P 541
           P
Sbjct: 441 P 441



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 159/317 (50%), Gaps = 8/317 (2%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLL-DSERVDIALGFYKEMRRNRISPNVYTLNM 268
           + A   + +MR+ G    + S N  + +L  + E VD AL  ++EM      P+ YT   
Sbjct: 137 KRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGT 196

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  C+LG I  A E+FK ME  GF  SV TY +LI G C    L  A+     M++N 
Sbjct: 197 LINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRND 256

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           I+PNV T+++L+ G CK G   +A ++   M   +  PN+VTY+TLING  +        
Sbjct: 257 IEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS------ 442
            + + M   G+K +   Y  +I GLC  G  ++AA  + ++    + PN +++S      
Sbjct: 317 EILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMH 376

Query: 443 -ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             ++ G C   +  RAFQLY SM           F+ L+  FC+  D  +AA +L EM+ 
Sbjct: 377 NMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVL 436

Query: 502 KCMAPDSIILSELYSGL 518
               PD  + + +  GL
Sbjct: 437 DGCIPDEGVWNVVIGGL 453



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 128/278 (46%), Gaps = 7/278 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C      +  L            A + F +M   GF   + +    +  L  S  +D 
Sbjct: 185 RGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDE 244

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G  +EM+RN I PNV+T + +M   CK G   +A+++ + M+    +P++ TY+TLI+
Sbjct: 245 AIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLIN 304

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +  L  A++  + M   G++PN   +  +I G C  G   EA     EM    +SP
Sbjct: 305 GLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISP 364

Query: 367 N-------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           N       V  +N ++ G     +      LY  M    I V+I T++ L+   CK G  
Sbjct: 365 NRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDL 424

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            KAA +++++  +  +P+   ++ +I G   RK    A
Sbjct: 425 HKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREA 462



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 94/251 (37%), Gaps = 36/251 (14%)

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV----- 381
           NG + +  TF  +I       +   A  +   MK          + ++  GYG+V     
Sbjct: 44  NGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLD 103

Query: 382 ------------------------------GNSEMGASLYEEMLRNGIKVDILTYNALIL 411
                                          + +     Y EM   GI   +++ N LI 
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIK 163

Query: 412 GLCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            LCK  +T  +A  + +++      P++ TY  LI G C   N   A +L+K M + G  
Sbjct: 164 ALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFS 223

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +   +  L+   CQ+ + D A  +L EM    + P+    S L  GL   G    AM+L
Sbjct: 224 ASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQL 283

Query: 531 FRKMEIRGLLP 541
              M+ +  LP
Sbjct: 284 LEVMDKKHHLP 294


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 179/385 (46%), Gaps = 37/385 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG+           + D +L   R C    + + +L +    R  ++ A     +MR
Sbjct: 163 TLIRGLCGRGRTANALAVLDEMLR--RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYK---------------------------- 252
           D G  P I + N  ++ +    RVD A+ F K                            
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 253 -------EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                  EM +    PNV T NM++   C+ G++E A+EV + +   G  P+  +YN L+
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
              C +  +  AM F +LM   G  P+++++NTL+   C+ G++  A  +  ++K    +
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 400

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P +++YNT+I+G  + G ++    L  EM+  G++ DI+TY+ +  GLC+E + + A   
Sbjct: 401 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 460

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              +    + PN   Y+A+I G C R+ +  A  L+  MI +GC PN+  + +L+     
Sbjct: 461 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAY 520

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSII 510
                 A ++L E+  + +   S+I
Sbjct: 521 EGLIKEARDLLDELCSRGVVRKSLI 545



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 3/316 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  ++    + ++D A     EM    + P+ YT N ++   C  G    A+ V
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M     +P V TY  L+   C +     AMK  + M   G  P+++T+N ++ G C+
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G++ +A      + +    PN V+YN ++ G       E    L  EM + G   +++T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N LI  LC++G  + A  +++ + K    PN+ +Y+ L+   C +K  ++A      M+
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC P+   +  L++  C++ + D A E+L ++ +K  AP  I  + +  GL   GK +
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 526 LAMKLFRKMEIRGLLP 541
            A++L  +M  +GL P
Sbjct: 421 EALELLNEMVSKGLQP 436



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 81/346 (23%), Positives = 159/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +    R +  NA     +M     +P + +    L +         A+    EMR
Sbjct: 161 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 220

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +P++ T N+V++  C+ G ++ A+E  KN+ S G  P+  +YN ++ G C      
Sbjct: 221 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 280

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M + G  PNV+TFN LI   C+KG +  A  +  ++     +PN ++YN L+
Sbjct: 281 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 340

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + +    +   +  + M+  G   DI++YN L+  LC+ G+   A  L+  L      
Sbjct: 341 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 400

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   +Y+ +I G      ++ A +L   M+  G +P+   +  + +  C+ +  + A   
Sbjct: 401 PVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRA 460

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++ +  + P++++ + +  GL    +   A+ LF  M   G +P
Sbjct: 461 FGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 506


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 180/384 (46%), Gaps = 3/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  SIL G L   S+     +F+  L S     ++   F+ L        K   A + + 
Sbjct: 335 SLNSILEGYLKCQSWQNAFTMFNDALESGL---ANVFTFNTLLSWLCKEGKMNEACNLWD 391

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++   G  P + S N  +      + ++ A   YKEM  N  +PN  T  ++M  + K G
Sbjct: 392 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 451

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            IE A  +F  M+    +P+ TT   +I G C  G         N     G  P  + +N
Sbjct: 452 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 511

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GF K+G ++ A+ ++ EM    ++P+ VTY +LI+G+ +  N ++   L  +M R 
Sbjct: 512 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+K+DI  Y  LI G CK    K A  L+ +L    L PN   Y+++ITG     N E A
Sbjct: 572 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 631

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             LYK M+  G   +   +  L+    ++     A+++  EML K + PD    + L +G
Sbjct: 632 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 691

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L + G+ E A K+   M  + ++P
Sbjct: 692 LCNKGQFENARKILEDMNGKNMIP 715



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 158/326 (48%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + F +L   Y  +    NA   F +M+D   LP   +    +  L  + R       +
Sbjct: 436 NAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLF 495

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +       P     N ++  F K G I  A  V++ M  +G  PS  TY +LI G C  
Sbjct: 496 NKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKG 555

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             + LA+K  N M++ G++ ++  + TLI GFCK+  +  A+ + +E++   +SPN   Y
Sbjct: 556 NNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIY 615

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N++I G+  + N E    LY++M+  GI  D+ TY +LI GL K G+   A+ +  ++  
Sbjct: 616 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             ++P+   ++ LI G C +   E A ++ + M      P+  I+  L++   +  +   
Sbjct: 676 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 735

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSG 517
           A  +  EML++ + PD+I    L +G
Sbjct: 736 AFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 3/360 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS    + + + Y   + ++NA   F    + G   +  + N  LS L    +++ A   
Sbjct: 331 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF-TFNTLLSWLCKEGKMNEACNL 389

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + E+    ISPNV + N ++   C+   I  A +V+K M   GF P+  T+  L+ G+  
Sbjct: 390 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 449

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG +  A    + M+   I P   T   +I G CK G+  E   +F++  +    P  + 
Sbjct: 450 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 509

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNT+I+G+ + GN  + +++Y EM   GI    +TY +LI G CK      A  L+ D+ 
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  L  +   Y  LI G C R++ + A +L   +  +G  PN+ I+  +++ F    + +
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A ++  +M+ + +  D    + L  GL   G+   A  +  +M  +G+LP   D+  T+
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPD--DRAHTV 687



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 209/465 (44%), Gaps = 20/465 (4%)

Query: 98  TALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFK 157
           T+L++ LT   V + LL  + D   +L++F  ++     +   +   I+L ILT + +  
Sbjct: 73  TSLNSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETH 132

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
            ++ +        S    S L D ++   ++ +         F           A   F 
Sbjct: 133 RAQYLFDQFASGKSVRF-SCLMDRLVECTKLYN---------FPLDIQEGNILEAEQHFL 182

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           Q +  G     E+ + F+  L        AL   +EMR     P   T   V+ A  K G
Sbjct: 183 QAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEG 242

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A+ +  +M + G   ++    +L+ G+C +G L  A+   N + ++G+ PN +T++
Sbjct: 243 NVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYS 302

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK G + +A   +SEMK   +  +V + N+++ GY +  + +   +++ + L +
Sbjct: 303 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES 362

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  ++ T+N L+  LCKEGK  +A  L  ++    + PN  +Y+ +I G C + N   A
Sbjct: 363 GL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAA 421

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++YK M+ +G  PN   F +LM  + +  D + A  +   M +  + P    L  +  G
Sbjct: 422 CKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKG 481

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
           L   G+      LF K   +G +P          GF K   IN A
Sbjct: 482 LCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 526



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K +    D FC+ RD      ++S ++ L+                E+R   +SPN +  
Sbjct: 578 KAYGTLIDGFCKRRD------MKSAHELLN----------------ELRGAGLSPNRFIY 615

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  F  +  +E A++++K M + G    + TY +LI G    G L  A      M  
Sbjct: 616 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 675

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI P+      LI G C KG+   A +I  +M   N+ P+V+ YNTLI G+ + GN + 
Sbjct: 676 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 735

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
              L++EML  G+  D +TY+ L+      GK K      +DL
Sbjct: 736 AFRLHDEMLDRGLVPDNITYDILV-----NGKFKGDGNFSRDL 773


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 171/360 (47%), Gaps = 39/360 (10%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S N  ++ L    R++ AL F  E       P+  T N +++  C+ G I++ +E+   M
Sbjct: 271 SVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              GF   V TYN+LISG C  G +  A++  + M     +PN +T+NTLI   CK+  +
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV 388

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  +   + +  V P+V T+N+LI G     N E+   L+EEM   G   D  TY+ L
Sbjct: 389 EAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448

Query: 410 ILGLCKEGKTKKAAYLVKDLD-------------------KNSLVPNAS----------- 439
           I  LC E + K+A  L+K+++                   KN+ V +A            
Sbjct: 449 IESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGV 508

Query: 440 -----TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
                TY+ LI G C  K  E A QL   MI  G +P+K  +  ++  FCQ  D  RAA+
Sbjct: 509 SRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAAD 568

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL--PKGFDKLRTINC 552
           ++  M      PD +    L  GL   G+ ++A KL R ++++G++  P+ ++ +    C
Sbjct: 569 IVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALC 628



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 197/430 (45%), Gaps = 26/430 (6%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           LL+ Q D   +L  F W       S     H  V H             +LR +  + SF
Sbjct: 65  LLRRQPDSSSALSLFQWASAQPNYS----AHPSVFH------------ELLRQLARAGSF 108

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIES 230
           D    L   +  S    D S   F +  +TYA         +    +  RD+   P    
Sbjct: 109 DSMLTLLRQMHSSKIPVDES--TFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRF 166

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  LS L+ + ++ +    + +M  + + P+V T N+++ A CK   +  A+ + ++M 
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMP 226

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           + G  P   T+ TL+ G   +  +  A++ K LM ++G +   ++ N L+ G CK+G++ 
Sbjct: 227 NYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE 286

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA R   E +     P+ VT+N L+NG  + G+ + G  + + ML  G ++D+ TYN+LI
Sbjct: 287 EALRFIYEEEG--FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLI 344

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK G+  +A  ++  +      PN  TY+ LI   C   + E A +L + +   G  
Sbjct: 345 SGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVL 404

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AM 528
           P+   F  L+   C   + + A E+  EM EK   PD    S L   L  C +  L  A+
Sbjct: 405 PDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESL--CSERRLKEAL 462

Query: 529 KLFRKMEIRG 538
            L ++ME+ G
Sbjct: 463 MLLKEMELSG 472



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 181/378 (47%), Gaps = 8/378 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+ + + ++ L  T         AT+    +   G LP + + N  +  L  +   +I
Sbjct: 366 RDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREI 425

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EM+     P+ +T ++++ + C    ++ A+ + K ME  G   +V  YNTLI 
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLID 485

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +  A    + ME  G+  + +T+NTLI G CK  ++ EA ++  +M    + P
Sbjct: 486 GLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKP 545

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  TY T++  + Q G+ +  A + + M  NG + DI+TY  LI GLCK G+   A+ L+
Sbjct: 546 DKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLL 605

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +    +V     Y+ +I   C RK ++ A +L++ M+  G  P+   ++++    C  
Sbjct: 606 RSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNG 665

Query: 487 ED-FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---- 541
                 A +  +EMLEK + P+      L  GL     ++  ++L   +  +G       
Sbjct: 666 GGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSET 725

Query: 542 ---KGFDKLRTINCAPEN 556
              +GF K++  N A  N
Sbjct: 726 SIIRGFLKIQKFNDALAN 743



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 164/326 (50%), Gaps = 6/326 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + GF   + + N  +S L     +D A+     M      PN  T N ++   CK   
Sbjct: 328 MLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENH 387

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A E+ + + S G +P V T+N+LI G C      +AM+    M++ G  P+  T++ 
Sbjct: 388 VEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSI 447

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY---GQVGNSEMGASLYEEML 395
           LI   C + +L EA  +  EM+ +  + NVV YNTLI+G     +VG++E    ++++M 
Sbjct: 448 LIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE---DIFDQME 504

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+    +TYN LI GLCK  + ++AA L+  +    L P+  TY+ ++   C + + +
Sbjct: 505 MLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIK 564

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           RA  + ++M  +GC P+   +  L+   C+    D A+++L  +  K M       + + 
Sbjct: 565 RAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVI 624

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
             L    + + AM+LFR+M  +G  P
Sbjct: 625 QALCKRKRTKEAMRLFREMMEKGDPP 650


>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
 gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
          Length = 509

 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 213/440 (48%), Gaps = 35/440 (7%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           L+K ++D   +LE F  V   K  +    T+S ++  L + +KF++ +++LR ++     
Sbjct: 56  LIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMM----- 110

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM----RDYGFLPII 228
                        Y  C     +F  L K +A   +F    + F ++    R+   L  I
Sbjct: 111 -------------YETCKFHESLFLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAI 157

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
            +C   L+ L++S++VD+  GF  ++ ++  + PN    N+ +   CK G +E A  V K
Sbjct: 158 STC---LNLLVESKQVDLLRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVK 214

Query: 288 NMESMGF-IPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCK 345
            M+      P++ TY+TL+ G C  G L  A++ F+ ++ K+ I P+ +T+N LI GF  
Sbjct: 215 EMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSC 274

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            GK+  A +I   MK+   SPNV  Y+ L++G+ + G  E     +EEM   G+K D + 
Sbjct: 275 WGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVG 334

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C+ G+  +A  L++++ +     +  T + L+ G C    +E A  +   + 
Sbjct: 335 YTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLS 394

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG-KD 524
             G   NK  + +++++ CQ  D D+A E+L   L +   P     +EL  GL   G  D
Sbjct: 395 SEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNELLVGLCKAGMAD 454

Query: 525 ELAMKLFRKMEIRGLLPKGF 544
           +  + L+      GL   GF
Sbjct: 455 DAVVALY------GLAEMGF 468


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 180/384 (46%), Gaps = 3/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  SIL G L   S+     +F+  L S     ++   F+ L        K   A + + 
Sbjct: 217 SLNSILEGYLKCQSWQNAFTMFNDALESGL---ANVFTFNTLLSWLCKEGKMNEACNLWD 273

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++   G  P + S N  +      + ++ A   YKEM  N  +PN  T  ++M  + K G
Sbjct: 274 EVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKG 333

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            IE A  +F  M+    +P+ TT   +I G C  G         N     G  P  + +N
Sbjct: 334 DIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYN 393

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GF K+G ++ A+ ++ EM    ++P+ VTY +LI+G+ +  N ++   L  +M R 
Sbjct: 394 TIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+K+DI  Y  LI G CK    K A  L+ +L    L PN   Y+++ITG     N E A
Sbjct: 454 GLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEA 513

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             LYK M+  G   +   +  L+    ++     A+++  EML K + PD    + L +G
Sbjct: 514 IDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLING 573

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L + G+ E A K+   M  + ++P
Sbjct: 574 LCNKGQFENARKILEDMNGKNMIP 597



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 172/360 (47%), Gaps = 2/360 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +I+ G    D+ +   K++  +L +      + + F +L   Y  +    NA   F 
Sbjct: 286 SYNNIILGHCRKDNINAACKVYKEMLDNGFT--PNAVTFTILMDGYFKKGDIENAFSIFH 343

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M+D   LP   +    +  L  + R       + +       P     N ++  F K G
Sbjct: 344 RMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEG 403

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I  A  V++ M  +G  PS  TY +LI G C    + LA+K  N M++ G++ ++  + 
Sbjct: 404 NINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYG 463

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI GFCK+  +  A+ + +E++   +SPN   YN++I G+  + N E    LY++M+  
Sbjct: 464 TLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 523

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI  D+ TY +LI GL K G+   A+ +  ++    ++P+   ++ LI G C +   E A
Sbjct: 524 GIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENA 583

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++ + M      P+  I+  L++   +  +   A  +  EML++ + PD+I    L +G
Sbjct: 584 RKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 208/483 (43%), Gaps = 55/483 (11%)

Query: 111 HVLLK--VQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD 168
           HV+L+  +++  +L  E        +   L  E +SI +H+L        + S+LR  + 
Sbjct: 44  HVMLRACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLRE-MR 102

Query: 169 SDSFDLPSKLFDSILYS----------YRMCDS--------SPLVFDLLFKTYAHRKKFR 210
           +  +  P   F S++ +           R+ D         +  V   L K Y  +   R
Sbjct: 103 AAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLR 162

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A     ++ + G +P   + +  +     +  ++ A  FY EM+   I  +VY+LN ++
Sbjct: 163 SALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSIL 222

Query: 271 HAF----------------------------------CKLGIIERAVEVFKNMESMGFIP 296
             +                                  CK G +  A  ++  + + G  P
Sbjct: 223 EGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISP 282

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V +YN +I GHC K  ++ A K    M  NG  PN +TF  L+ G+ KKG +  A  IF
Sbjct: 283 NVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIF 342

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             MK  N+ P   T   +I G  + G S  G  L+ + +  G     + YN +I G  KE
Sbjct: 343 HRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKE 402

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G    A+ + +++ +  + P+  TY++LI G C   N + A +L   M R G + +   +
Sbjct: 403 GNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAY 462

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+  FC+  D   A E+L E+    ++P+  I + + +G  +    E A+ L++KM  
Sbjct: 463 GTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVN 522

Query: 537 RGL 539
            G+
Sbjct: 523 EGI 525



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/360 (26%), Positives = 171/360 (47%), Gaps = 3/360 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS    + + + Y   + ++NA   F    + G   +  + N  LS L    +++ A   
Sbjct: 213 SSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF-TFNTLLSWLCKEGKMNEACNL 271

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + E+    ISPNV + N ++   C+   I  A +V+K M   GF P+  T+  L+ G+  
Sbjct: 272 WDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFK 331

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG +  A    + M+   I P   T   +I G CK G+  E   +F++  +    P  + 
Sbjct: 332 KGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 391

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNT+I+G+ + GN  + +++Y EM   GI    +TY +LI G CK      A  L+ D+ 
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  L  +   Y  LI G C R++ + A +L   +  +G  PN+ I+  +++ F    + +
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A ++  +M+ + +  D    + L  GL   G+   A  +  +M  +G+LP   D+  T+
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPD--DRAHTV 569



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 166/351 (47%), Gaps = 10/351 (2%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F Q +  G     E+ + F+  L        AL   +EMR     P   T   V+ 
Sbjct: 59  AEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVIT 118

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A  K G +  A+ +  +M + G   ++    +L+ G+C +G L  A+   N + ++G+ P
Sbjct: 119 ACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVP 178

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +T++ LI G CK G + +A   +SEMK   +  +V + N+++ GY +  + +   +++
Sbjct: 179 NKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMF 238

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            + L +G+  ++ T+N L+  LCKEGK  +A  L  ++    + PN  +Y+ +I G C +
Sbjct: 239 NDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRK 297

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N   A ++YK M+ +G  PN   F +LM  + +  D + A  +   M +  + P    L
Sbjct: 298 DNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 357

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
             +  GL   G+      LF K   +G +P          GF K   IN A
Sbjct: 358 GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLA 408



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 27/223 (12%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K +    D FC+ RD      ++S ++ L+                E+R   +SPN +  
Sbjct: 460 KAYGTLIDGFCKRRD------MKSAHELLN----------------ELRGAGLSPNRFIY 497

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  F  +  +E A++++K M + G    + TY +LI G    G L  A      M  
Sbjct: 498 NSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLS 557

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI P+      LI G C KG+   A +I  +M   N+ P+V+ YNTLI G+ + GN + 
Sbjct: 558 KGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQE 617

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
              L++EML  G+  D +TY+ L+      GK K      +DL
Sbjct: 618 AFRLHDEMLDRGLVPDNITYDILV-----NGKFKGDGNFSRDL 655



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 144/318 (45%), Gaps = 5/318 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I+  N  L++++       A   + +M    ++ + +TL++++ A  K G I  A + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F   ++ G       Y+  +   C K     A+     M   G  P   TF ++I    K
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G + EA R+  +M     S N+    +L+ GY   GN      L  E+  +G+  + +T
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI G CK G  +KA     ++    +  +  + ++++ G    ++ + AF ++   +
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            SG   N   F  L+S  C+    + A  +  E++ K ++P+ +  + +  G  HC KD 
Sbjct: 243 ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG--HCRKDN 299

Query: 526 L--AMKLFRKMEIRGLLP 541
           +  A K++++M   G  P
Sbjct: 300 INAACKVYKEMLDNGFTP 317


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDI 246
           C  +   +++L K      + + A +    M D G    P + S    ++       +D 
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G Y EM    I PNV T + ++ A CK   +++A+EV  +M   G +P+  TYN+++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA ++F  M    + P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TY TL+ GY   G       L + M+RNGI  +   ++ LI    K+GK  +A  + 
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L P+  TY  +I   C     E A + ++ MI     P   ++  L+ + C  
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + +D+A E++LEML++ +  D+I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKP 512



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+GF K+M  + + P+V T N +M 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ LI  + K+GK+ +A  +FS+M+   ++P+ VTY T+I    + G  E     +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+   +    + YN+LI  LC   K  KA  L+ ++    +  +   ++++I   C  
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+  +C     D A ++L  M+   M PD +  
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + E A+ LFR+ME  G+ P
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+SP     N ++H+ C     ++A E+   M   G       +N++I  HC +G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT++TLI G+C  GK+ EA ++ + M +  + P+ VTYNTL
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 676 LFAALSANGLVPD 688



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++P+  T   V+   CK G +E A+  F+ M      P    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI   C       A +    M   GI  + I FN++I   CK+G++ E+ ++F  M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+++TY+TLI+GY   G  +    L   M+  G+K D +TYN LI G CK  + + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L ++++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +   GL+P 
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP- 687

Query: 543 GFDKLRTINCAPEN 556
               +RT +   EN
Sbjct: 688 ---DVRTYSLMAEN 698



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++ Y  +M D   SP  +V++ L  +     K+  A +   +M D G  L  I  
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-- 480

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + P++ T + ++  +C  G ++ A ++ 
Sbjct: 481 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TYNTLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I  L K G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +GC  N  +   ++    Q  D  RA   L  + EK
Sbjct: 718 NGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 18/304 (5%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIER-----AVEVFKNMESMG---FIPSVTTY 301
           F + +RR R   ++Y LN      C L  + R     AV  +  M   G     P++ TY
Sbjct: 42  FDELLRRGR-GASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMK 360
             LI   C  G L L       + K G + + I F  L+ G C   +  +A + +   M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGK 418
                PNV +YN L+ G      S+    L + M  +G     D+++Y  +I G  KEG 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA     ++    ++PN  TYS++I   C  +  ++A ++  SM+++G  PN   +  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  +C +     A   L +M    + PD +  + L   L   G+   A K+F  M  RG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 539 LLPK 542
           L P+
Sbjct: 335 LKPE 338



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 164/381 (43%), Gaps = 43/381 (11%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFK 201
           ++H L    K+  ++ ++  +LD     L +  F+SI+ S+    R+ +S  L FDL+ +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVR 507

Query: 202 T---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                           Y    K   AT     M   G  P   + N  ++      R++ 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++EM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A  + 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V TY+ +     + G  E    L+  M  NG   +    N+++  L + G   +A   
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 426 VKDLDKNSLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           +  +D+      AST S    L++G          +Q Y S IR G      IF + +++
Sbjct: 747 LFMIDEKHFSLEASTASLFLDLLSGG--------KYQEYHSCIRGG------IFSLCVNS 792

Query: 483 FCQNE---DFDRAAEVLLEML 500
             Q     D +     LL++L
Sbjct: 793 EVQENHLLDSESGVHFLLKLL 813


>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
 gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
          Length = 502

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 183/374 (48%), Gaps = 14/374 (3%)

Query: 175 PSKLFDSIL--YSYRMCDSSPLVFDLLFKTYA--HRKKFRNATDTFCQMRDYGFLPIIES 230
           P +L  SIL  +       +P  F ++F+ +A  HR+            R +G    +  
Sbjct: 119 PRQLTSSILALFPRHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPL 178

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  L +L+ S     A    + + R R  P+  T N +   +C++    RA+++ + M 
Sbjct: 179 FNSLLDALVKSRHAGKAASLVRALER-RFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 237

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-----IQPNVITFNTLIFGFCK 345
             G  P+ TTYN ++ G    G L  A  F   M+K G      +P+V+++ T++ G   
Sbjct: 238 ESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGV 297

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+L +A ++F EM     +P++ TYN LI    + GN E   +++++M+R G   +++T
Sbjct: 298 AGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVT 357

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI GLC  GK  +A  L+  + +    PN  TY+ LI       + E+A  L+++M 
Sbjct: 358 YTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFETMS 417

Query: 466 RSG-CRPNKHIFEMLMSTFC---QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           +   C PN+  + +++S      + ED   AA +++EM+++   P   + + + +GL   
Sbjct: 418 KGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLMLT 477

Query: 522 GKDELAMKLFRKME 535
           G  EL+ +L R  E
Sbjct: 478 GNQELSRELLRMQE 491



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 161/331 (48%), Gaps = 15/331 (4%)

Query: 242 ERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
            R D A+ F+  + R+  ++ ++   N ++ A  K     +A  + + +E   F P   T
Sbjct: 154 RRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERR-FPPDAVT 212

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YNTL  G C     S A+     M ++GI P   T+N ++ GF + G+L  A   F +MK
Sbjct: 213 YNTLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMK 272

Query: 361 A-----TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
                  N  P+VV+Y T+++G G  G  +    +++EM R G    I TYNALI   CK
Sbjct: 273 KRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCK 332

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           +G  + A  +  D+ +   +PN  TY+ LI G C     +RA +L   M R GC PN   
Sbjct: 333 KGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQT 392

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEML--EKCMAPD---SIILSELYSGLHHCGKD-ELAMK 529
           + +L+    +  D ++A  +   M   E+C+      +II+S ++  +    +D  +A +
Sbjct: 393 YNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMF--VRKRAEDMAVAAR 450

Query: 530 LFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           +  +M  RG LP+ F   R +N     G +E
Sbjct: 451 MVVEMVDRGYLPRRFMFNRVLNGLMLTGNQE 481


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 182/398 (45%), Gaps = 10/398 (2%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           L + +H + L + T N        +LR  L++ SF    K+FD +  +    D     F 
Sbjct: 127 LEMRSHGLPLCVETAN-------WVLRVGLETGSFVYARKVFDGMTRAGVCPDERS--FR 177

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
            L        K          M  YGF     +C   + SL +  R      F++ M   
Sbjct: 178 ALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLEM 237

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
              PNV      +   CK   +++A  V + M   G  P+V T+ TLI G C  G    A
Sbjct: 238 GTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERA 297

Query: 318 MK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            + F  L++ +  +PNV T+  +I G+C++GKL  A  +   M    + PN  TY TLI 
Sbjct: 298 FRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIG 357

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+ + G+ +    L  +M + G   +I TYNA+I G CK+GK ++A  +++      L  
Sbjct: 358 GHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKF 417

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY+ LIT  C + +   A  L+  M+ +GC P+   +  L+ST+CQ    + + +  
Sbjct: 418 DKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFF 477

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + L   + P     + + +G    G+  +A+++F +M
Sbjct: 478 DKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERM 515



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 155/315 (49%), Gaps = 1/315 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++ ++   + +F++ ++ F +M + G  P + +   ++  L     V  A    +EM   
Sbjct: 213 VVVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGR 272

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
            + PNVYT   ++   CK+G  ERA  +F K ++S  + P+V TY  +I G+C +G L+ 
Sbjct: 273 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLAR 332

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A      M + G++PN  T+ TLI G CK G    A  + ++MK     PN+ TYN +I+
Sbjct: 333 AEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVID 392

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+ + G  +    +       G+K D +TY  LI   CK+G    A  L   + +N   P
Sbjct: 393 GFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCP 452

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   Y++LI+  C ++  E + + +   +  G  P K  +  +++ +C+      A  V 
Sbjct: 453 DIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVF 512

Query: 497 LEMLEKCMAPDSIIL 511
             M++     DSI++
Sbjct: 513 ERMVQNGCFADSILM 527



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 5/346 (1%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           +   +    +   A D   +MR +G    +E+ N  L   L++     A   +  M R  
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+  +   ++   C+ G +E    +   M   GF     T   ++   C KG      
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +F   M + G  PNV+ +   I G CK+  + +A  +  EM    + PNV T+ TLI+G 
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 379 GQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
            ++G +E    L+ ++++ +  K ++ TY  +I G C+EGK  +A  L+  + +  L PN
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
            +TY+ LI G C   + +RAF+L   M + G  PN + +  ++  FC+      A +VL 
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
               + +  D I  + L +   HC +  +  A+ LF +M   G  P
Sbjct: 409 MATSQGLKFDKITYTILIT--EHCKQGHITYALDLFDRMVENGCCP 452



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 1/334 (0%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           F  A   F  M   G  P   S    +       +V+        M R   S +  T  +
Sbjct: 154 FVYARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTV 213

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           V+ + C+ G  +   E F+ M  MG  P+V  Y   I G C +  +  A      M   G
Sbjct: 214 VVRSLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRG 273

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMG 387
           ++PNV T  TLI G CK G    A R+F ++ K+++  PNV TY  +I GY + G     
Sbjct: 274 LKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARA 333

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L   M+  G+K +  TY  LI G CK G   +A  L+  + +   +PN  TY+A+I G
Sbjct: 334 EMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDG 393

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C +   + A+++ +     G + +K  + +L++  C+      A ++   M+E    PD
Sbjct: 394 FCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPD 453

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + L S      + E + K F K  + GLLP
Sbjct: 454 IEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLP 487



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 149/327 (45%), Gaps = 5/327 (1%)

Query: 223 GFLPII-ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           G LP+  E     +++  ++ R+  A     EMR + +   V T N V+    + G    
Sbjct: 97  GSLPMAHEVMRGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVY 156

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A +VF  M   G  P   ++  L+   C +G +         M + G   +  T   ++ 
Sbjct: 157 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 216

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C+KG+  + +  F  M      PNVV Y   I+G  +    +    + EEM+  G+K 
Sbjct: 217 SLCEKGRFKDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 276

Query: 402 DILTYNALILGLCKEGKTKKAAYL-VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           ++ T+  LI GLCK G T++A  L +K +  +S  PN  TY+ +I G C      RA  L
Sbjct: 277 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 336

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M+  G +PN + +  L+   C+   FDRA E++ +M ++   P+    + +  G   
Sbjct: 337 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 396

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKL 547
            GK + A K+ R    +GL    FDK+
Sbjct: 397 KGKIQEAYKVLRMATSQGL---KFDKI 420



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 98/207 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   Y    K   A     +M + G  P   +    +         D A     +M+
Sbjct: 317 YTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMK 376

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    PN+YT N V+  FCK G I+ A +V +   S G      TY  LI+ HC +G ++
Sbjct: 377 QEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHIT 436

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + M +NG  P++  + +LI  +C++ ++ E+ + F +     + P   TY ++I
Sbjct: 437 YALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMI 496

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVD 402
            GY +VG S M   ++E M++NG   D
Sbjct: 497 AGYCKVGRSTMALRVFERMVQNGCFAD 523


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 168/338 (49%), Gaps = 1/338 (0%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERV 244
           YR+   + ++F+ L   +    +  +A      M   YG +P + + N  +        V
Sbjct: 340 YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLV 399

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +AL   ++MR     PNVY+  +++  FCKLG I+ A  +   M + G  P+   +N L
Sbjct: 400 GLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCL 459

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           IS  C +  +  A++    M + G +P+V TFN+LI G C+  ++  A  +  +M +  V
Sbjct: 460 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 519

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N VTYNTLIN + + G  +    L  EM+  G  +D +TYN+LI GLC+ G+  KA  
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L + + ++ LVP++ + + LI G C     E A +  K M+  G  P+   F  L++  C
Sbjct: 580 LFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 639

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           +    +    +  ++  + + PD++  + L S L   G
Sbjct: 640 RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGG 677



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 164/311 (52%), Gaps = 1/311 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  +   +   R+D A     +M  +  I P+V T N +++ + K G++  A+EV ++M 
Sbjct: 351 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           + G  P+V +Y  L+ G C  G +  A    N M  +G++PN + FN LI  FCK+ ++ 
Sbjct: 411 NKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIP 470

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA  IF EM      P+V T+N+LI+G  +V   +    L  +M+  G+  + +TYN LI
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
               + G+ K+A  LV ++     + +  TY++LI G C     ++A  L++ M+R G  
Sbjct: 531 NAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLV 590

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+     +L++  C++   + A E   EM+ +   PD +  + L +GL   G+ E  + +
Sbjct: 591 PSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 650

Query: 531 FRKMEIRGLLP 541
           FRK++  G+ P
Sbjct: 651 FRKLQAEGIPP 661



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 214/493 (43%), Gaps = 62/493 (12%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           +TPF++   LL++  D   S+E F+W  + K    + + + +++  L  N +FK+ + +L
Sbjct: 70  ITPFQLCK-LLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLL 128

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRD- 221
             + D +       LF SI+  Y                   +  F    T    +MR+ 
Sbjct: 129 MQMKD-EGIVFKESLFISIMRDY------------------DKAGFPGQTTRLMLEMRNV 169

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y   P  +S N  L  L+      +A   + +M   +I P ++T  +VM A C +  ++ 
Sbjct: 170 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDS 229

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           A+ V ++M   G +P+   Y TLI     CN+  ++ A++    M   G  P+  TFN +
Sbjct: 230 ALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNR--VNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY-------- 391
           I G CK  +++EA ++ + M     +P+ +TY  L+NG  ++G  +    L+        
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTS 347

Query: 392 -----------------------EEMLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVK 427
                                   +M+ + GI  D+ TYN+LI G  K+G    A  +++
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+      PN  +Y+ L+ G C     + A+ L   M   G +PN   F  L+S FC+  
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFD 545
               A E+  EM  K   PD    + L SGL  C  DE+  A+ L R M   G++     
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGL--CEVDEIKHALWLLRDMISEGVVANTVT 525

Query: 546 KLRTINCAPENGE 558
               IN     GE
Sbjct: 526 YNTLINAFLRRGE 538



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 197/424 (46%), Gaps = 28/424 (6%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF---------------DSIL 183
           T +++++VL IL      K + ++   +L   S  +P  LF               DS L
Sbjct: 175 TFKSYNVVLEILVSGNCHKVAANVFYDML---SRKIPPTLFTFGVVMKALCAVNEVDSAL 231

Query: 184 YSYR-----MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
              R      C  + +++  L  + +   +   A     +M   G +P  E+ N  +  L
Sbjct: 232 SVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 291

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
              +R++ A      M     +P+  T   +M+  CK+G ++ A ++F  +      P+ 
Sbjct: 292 CKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTS 347

Query: 299 TTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             +NTLI G    G L  A     +++   GI P+V T+N+LI+G+ KKG +  A  +  
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +M+     PNV +Y  L++G+ ++G  +   +L  EM  +G+K + + +N LI   CKE 
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +  +A  + +++ +    P+  T+++LI+G C     + A  L + MI  G   N   + 
Sbjct: 468 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 527

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L++ F +  +   A +++ EM+ +    D I  + L  GL   G+ + A  LF KM   
Sbjct: 528 TLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 538 GLLP 541
           GL+P
Sbjct: 588 GLVP 591



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 130/261 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   +    +   A + F +M   G  P + + N  +S L + + +  AL   ++M 
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              +  N  T N +++AF + G I+ A ++   M   G +    TYN+LI G C  G + 
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVD 575

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M ++G+ P+ I+ N LI G C+ G + EA     EM     +P++VT+N+LI
Sbjct: 576 KARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 635

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  + G  E G +++ ++   GI  D +TYN L+  LCK G    A  L+ +  ++  V
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFV 695

Query: 436 PNASTYSALITGQCVRKNSER 456
           PN  T+S L+     ++  +R
Sbjct: 696 PNDRTWSILLQSLVPQETLDR 716


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/391 (27%), Positives = 181/391 (46%), Gaps = 35/391 (8%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + +  L   +    K   A + F QM++ G  P + +    +++  +  +   AL
Sbjct: 256 CLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEAL 315

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F++EM  N I PNVYT  +++  FCK+G ++  +E+   M   G + SV  +N LI G+
Sbjct: 316 KFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGY 375

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G++  A+   + M+ N + PN  T+N LI GFC+K  +  A  + ++M    +SPN+
Sbjct: 376 CKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNL 435

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYNTLI+G  +    +    L+  M+++G   D  T+ A I  LCK GK ++A  + + 
Sbjct: 436 VTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK--------------- 473
           L +     N   Y+ALI G C  +    A  L+K M+  GC PN                
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGK 555

Query: 474 --------------------HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
                               H + +L+    +  DFDRA   L +M+     P+ +  + 
Sbjct: 556 VEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTA 615

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                   G+   A ++  K++  G+L   F
Sbjct: 616 FIKAYCRQGRLLEAEEMVVKIKEEGILLDSF 646



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 226/511 (44%), Gaps = 49/511 (9%)

Query: 74  PKGQDLDFVNIAYSHLIHSDWKKLTALST---HLTPFRVKHVLLKVQKDYVLSLEFFTWV 130
           P     D  +  ++ L+   W+K  + +T    LTP  +  +        + +L FF W+
Sbjct: 34  PNSLQQDLPSQIFTILLQPQWRKNPSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWI 93

Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS----------------DSFDL 174
                   T+ ++  +L IL +N   +++E++   ++ S                  F L
Sbjct: 94  HYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSL 153

Query: 175 P----SKLFDSILYSYRMCDSSPLVF-DLL----------FKTY--AHRK--KFRNATDT 215
                ++LF  +L  + + D    +F D+L          F T   AH K      A   
Sbjct: 154 SVTSYNRLF-MVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAY 212

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDI-----ALGFYKEMRRNRISPNVYTLNMVM 270
           FC +  +GF      C+ F  + L      I     A   ++ M +     N  +   ++
Sbjct: 213 FCGLMKFGF-----CCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLI 267

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           H FC++G I+ A+E+F  M+  G  P V TY  L++  C  G  + A+KF   M +NGI+
Sbjct: 268 HGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIE 327

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PNV T+  LI  FCK GK+ E   + S M    +  +VV +N LI+GY + G  E    +
Sbjct: 328 PNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICV 387

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            + M  N +  +  TYN LI G C++    +A  L+  + +N L PN  TY+ LI G C 
Sbjct: 388 LDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCK 447

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +  + A++L+  MI+ G  P++  F   +   C+    ++A +V   + EK    +  +
Sbjct: 448 ARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFL 507

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + L  G     K   A  LF++M   G  P
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFP 538



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 166/346 (47%), Gaps = 2/346 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           CDS    +  L   Y    +  +A   F  M   G L    S    +    +  ++D AL
Sbjct: 223 CDS--FTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEAL 280

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M+ +   P+V T  +++ AFC++G    A++ F+ M   G  P+V TY  LI   
Sbjct: 281 ELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYF 340

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +   M+  + M + G+  +V+ FN LI G+CK+G + +A  +   MK   V PN 
Sbjct: 341 CKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS 400

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TYN LI G+ +  + +   +L  +M  N +  +++TYN LI GLCK      A  L   
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K+  VP+  T+ A I   C     E+A Q+++S+       N+ ++  L+  +C+ E 
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           F  A  +   ML +   P+SI  + L  GL   GK E AM L   M
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 158/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +    K     +    M + G +  +   N  +        ++ A+     M+
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N++ PN  T N ++  FC+   ++RA+ +   M      P++ TYNTLI G C   ++ 
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  +LM K+G  P+  TF   I   CK GK+ +A+++F  +K  +   N   Y  LI
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY +         L++ ML  G   + +T+N L+ GL KEGK + A  LV  + K    
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   TY+ LI       + +RA      MI SGC+PN   +   +  +C+      A E+
Sbjct: 573 PTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEM 632

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++++ E+ +  DS I   L +     G+ + A  +  +M   G  P
Sbjct: 633 VVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEP 678



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 147/329 (44%), Gaps = 6/329 (1%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS + F+ L   Y  R    +A      M+     P   + N+ +      + +D A+  
Sbjct: 363 SSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMAL 422

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             +M  N++SPN+ T N ++H  CK  +++ A  +   M   GF+P   T+   I   C 
Sbjct: 423 LNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK 482

Query: 311 KGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            G +  A + F++L EK+  + N   +  LI G+CK  K  +A+ +F  M      PN +
Sbjct: 483 MGKVEQAHQVFESLKEKHA-EANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+N L++G  + G  E   SL + M +   K  + TY  LI  + +E    +A   +  +
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             +   PN  TY+A I   C +     A ++   +   G   +  I+++L++ +      
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661

Query: 490 DRAAEVLLEMLEKCMAPD----SIILSEL 514
           D A  VL+ M +    P     SI+L  L
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHL 690



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 145/334 (43%), Gaps = 31/334 (9%)

Query: 232 NKFL-SSLLD----SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           N+FL ++L+D    +E+   A   +K M      PN  T N+++    K G +E A+ + 
Sbjct: 504 NEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M      P+V TY  LI     +     A  F + M  +G QPNV+T+   I  +C++
Sbjct: 564 DVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQ 623

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G+L EA  +  ++K   +  +   Y+ L+N YG +G  +    +   M   G +    TY
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683

Query: 407 NALILGLCKEGKTKKA--------------------------AYLVKDLDKNSLVPNAST 440
           + L+  L  E   K+                             L + + +   VPN +T
Sbjct: 684 SILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNT 743

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS LI G C  ++   AF+L+  M  SG  P+++I   L+S+ C+    + A  +L  M+
Sbjct: 744 YSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMM 803

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           E            L  GL   G  E A ++FR +
Sbjct: 804 EYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSL 837



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 18/270 (6%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           GFI +V +Y  L+      G L  A   +N M K+ +                    HEA
Sbjct: 98  GFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSS------------------HEA 139

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             + + +     S +V +YN L     + G  +    L+++ML +G++ +++++N ++  
Sbjct: 140 RFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNA 199

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK G    A      L K     ++ TY++LI G C       A+++++ M + GC  N
Sbjct: 200 HCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRN 259

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           +  +  L+  FC+    D A E+  +M E    PD    + L +     GK+  A+K F 
Sbjct: 260 EVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFE 319

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +M   G+ P  +     I+   + G+ + G
Sbjct: 320 EMVENGIEPNVYTYTVLIDYFCKVGKMDEG 349



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 114/251 (45%), Gaps = 9/251 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            ++D+L   Y    +  +A     +M D G  P  ++ +  L  L+  +     +G    
Sbjct: 646 FIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMG---- 701

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  N  + +V   N+      K+   E    +F+ M   G +P+V TY+ LI G C    
Sbjct: 702 LDLNSTNISVDNANIW-----KIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEH 756

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LSLA +  N M+++GI P+    N+L+   CK G   EA R+   M   N   ++ +Y  
Sbjct: 757 LSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKL 816

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ G  + GN E    ++  +L  G   D + +  L+ GL ++G   + + L   ++K  
Sbjct: 817 LVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876

Query: 434 LVPNASTYSAL 444
              ++ T++ L
Sbjct: 877 CRLHSDTHTML 887


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 156/296 (52%), Gaps = 1/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL +++ +    + PN+     ++   CK G I++A E+ + M   G+ P+V T+ +LI 
Sbjct: 259 ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLID 318

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C KG    A + F  L+     +PNV+T+  +I G+C++ KL+ A  + S MK   + 
Sbjct: 319 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLV 378

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TY TLI+G+ + GN E    L   M   G   ++ TYNA++ GLCK G+ ++A  +
Sbjct: 379 PNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKM 438

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++D  +N L P+  TY+ L++  C ++N  +A  L+  M++ G +P+ H +  L++ FC+
Sbjct: 439 LEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCR 498

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 +     E +   + P +   + +  G    G   LAMK F ++   G  P
Sbjct: 499 ENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAP 554



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 183/372 (49%), Gaps = 8/372 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V   + ++++   + + A +   +M + G +P   + N  +    +   V+ A   ++EM
Sbjct: 137 VMRCMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEM 196

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + P+  +  +++  +CK+G I  A +    M   GF+    T+  +IS    KG  
Sbjct: 197 CVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYT 256

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A+ +   +   G++PN+I F  +I G CK+G + +A  +  EM      PNV T+ +L
Sbjct: 257 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 316

Query: 375 INGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R+   K ++LTY A+I G C+E K  +A  L+  + +  
Sbjct: 317 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQG 376

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN +TY+ LI G C   N ERA+ L   M   G  PN   +  +++  C+      A 
Sbjct: 377 LVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAY 436

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPK--GFDKLRT 549
           ++L +  +  + PD    + L S   HC ++ +  A+ LF KM   G+ P    +  L  
Sbjct: 437 KMLEDGFQNGLKPDKFTYNILMS--EHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIA 494

Query: 550 INCAPENGEKES 561
           + C  EN  KES
Sbjct: 495 VFCR-ENRMKES 505



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 149/315 (47%), Gaps = 1/315 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG-FYKEM 254
           F  + +    R   + A +   +M   G+ P + +    +  L      + A   F K +
Sbjct: 278 FTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLV 337

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R     PNV T   ++  +C+   + RA  +   M+  G +P+  TY TLI GHC  G  
Sbjct: 338 RSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNF 397

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A    NLM   G  PN+ T+N ++ G CK+G++ EA ++  +     + P+  TYN L
Sbjct: 398 ERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNIL 457

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++ + +  N     +L+ +ML+ GI+ DI +Y  LI   C+E + K++    ++  +  +
Sbjct: 458 MSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGI 517

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P   TY+++I G C   N   A + +  +   GC P+   +  ++S  C+    D A  
Sbjct: 518 IPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARS 577

Query: 495 VLLEMLEKCMAPDSI 509
           +   M+EK + P  +
Sbjct: 578 LYDSMIEKGLVPCEV 592



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 162/347 (46%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F L+   ++ +     A   F ++ D G  P + +    +  L     +  A    +EM 
Sbjct: 243 FTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMV 302

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLL 314
                PNVYT   ++   CK G  E+A  +F K + S    P+V TY  +ISG+C +  L
Sbjct: 303 GKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKL 362

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A    + M++ G+ PN  T+ TLI G CK G    A  + + M +   SPN+ TYN +
Sbjct: 363 NRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAI 422

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +NG  + G  +    + E+  +NG+K D  TYN L+   CK+   ++A  L   + K  +
Sbjct: 423 VNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGI 482

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  +Y+ LI   C     + +   ++  +R G  P    +  ++  +C+  +   A +
Sbjct: 483 QPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMK 542

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + +   APDSI    + SGL    K + A  L+  M  +GL+P
Sbjct: 543 FFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGLVP 589



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 117/256 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  +   Y    K   A     +M++ G +P   +    +     +   + A      
Sbjct: 347 LTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNL 406

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SPN+ T N +++  CK G ++ A ++ ++    G  P   TYN L+S HC +  
Sbjct: 407 MSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQEN 466

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+   N M K GIQP++ ++ TLI  FC++ ++ E+   F E     + P   TY +
Sbjct: 467 IRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTS 526

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I GY + GN  +    +  +  +G   D +TY A+I GLCK+ K  +A  L   + +  
Sbjct: 527 MICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKG 586

Query: 434 LVPNASTYSALITGQC 449
           LVP   T   L    C
Sbjct: 587 LVPCEVTRITLAYEYC 602



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 101/220 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L   +     F  A D    M   GF P + + N  ++ L    RV  A    ++  
Sbjct: 384 YTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGF 443

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +N + P+ +T N++M   CK   I +A+ +F  M  +G  P + +Y TLI+  C +  + 
Sbjct: 444 QNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMK 503

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            +  F     + GI P   T+ ++I G+C++G L  A + F  +     +P+ +TY  +I
Sbjct: 504 ESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAII 563

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +G  +    +   SLY+ M+  G+    +T   L    CK
Sbjct: 564 SGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 16/382 (4%)

Query: 167 LDSDSF--DLPSKLFD--SILYSYRMCDSSPLVFDLLFKTYAHRKKFRN-----ATDTFC 217
           LDS+ F  ++ + LF   S++  +    +    FDLL   Y+   +FRN     A D F 
Sbjct: 122 LDSEKFHIEIANALFGLTSVVGRFEWTQA----FDLLIHVYS--TQFRNLGFSCAVDVFY 175

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +   G  P +++CN  LSSL+ +   +     ++ M      P+V++   V++A CK G
Sbjct: 176 LLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGA-CPDVFSFTNVINALCKGG 234

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+E+F  ME +G  P+V TYN +I+G C  G L  A + K  M   G+QPN+ T+ 
Sbjct: 235 KMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYG 294

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G  K     + N I  EM     +PNVV +N LI+GY ++GN E    + + M+  
Sbjct: 295 ALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK 354

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I    +T  +L+ G CK  + + A   ++++  + L  +     +++   C +     A
Sbjct: 355 NITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSA 414

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F+  K M+    RP+  +  ML+   C++     A E+   +LEK      +  + L  G
Sbjct: 415 FRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHG 474

Query: 518 LHHCGKDELAMKLFRKMEIRGL 539
           L   GK   A ++ ++M  RGL
Sbjct: 475 LCGAGKLPEASRIVKEMLERGL 496



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 175/384 (45%), Gaps = 8/384 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMC--DSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
           S+++G   SD  +      + IL S      D+   V   L K + +   FR        
Sbjct: 365 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTK----M 420

Query: 219 MRDYGFLPIIESCNKFLSSLL-DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           M    F P        +  L  D + ++    +++ + +   +  V T N ++H  C  G
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKV-TSNALIHGLCGAG 479

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  + K M   G      TYN LI G CN+G +    + +  M K GIQP++ T+N
Sbjct: 480 KLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYN 539

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G C  GKL +A +++ E KA+ +  N+ TY  ++ GY +    E   +L+ E+L  
Sbjct: 540 FLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSK 599

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            ++++ + YN +I   C+ G    A  L++++    ++PN +TYS+LI G C     E A
Sbjct: 600 KMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M + G  PN   +  L+  +C+    D A    LEM+   + P+    + +  G
Sbjct: 660 KHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDG 719

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G  E A  L  KM+  G++P
Sbjct: 720 YCKLGNMEKANNLLIKMKESGIVP 743



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 165/348 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S L+  +L        K   AT+ + ++ + G      + N  +  L  + ++  A    
Sbjct: 429 SDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIV 488

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           KEM    +  +  T N ++  FC  G +E    + + M   G  P + TYN L+ G CN 
Sbjct: 489 KEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNV 548

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A+K  +  + +G+  N+ T+  ++ G+CK  ++ +   +F+E+ +  +  N + Y
Sbjct: 549 GKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVY 608

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I  + Q GN      L E M   GI  +  TY++LI G+C  G  + A +L+ ++ K
Sbjct: 609 NIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRK 668

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              VPN   Y+ALI G C     + A   +  MI     PNK  + +++  +C+  + ++
Sbjct: 669 EGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEK 728

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           A  +L++M E  + PD +  + L +G       + A K+  +M   GL
Sbjct: 729 ANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGL 776



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 140/286 (48%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +    +  +V+      +EM +  I P++YT N ++   C +G ++ A++++   ++
Sbjct: 504 NALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKA 563

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G I ++ TY  ++ G+C    +       N +    ++ N I +N +I   C+ G +  
Sbjct: 564 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 623

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++   MK+  + PN  TY++LI+G   +G  E    L +EM + G   +++ Y ALI 
Sbjct: 624 ALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIG 683

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK G+   A     ++   ++ PN  TY+ +I G C   N E+A  L   M  SG  P
Sbjct: 684 GYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVP 743

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           +   + +L + FC+  D D A +V  +M  + +  D I  + L  G
Sbjct: 744 DVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 128/252 (50%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +   +  K  +A   + + +  G +  I +    +     + R++     + E+ 
Sbjct: 538 YNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELL 597

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             ++  N    N+++ A C+ G +  A+++ +NM+S G +P+  TY++LI G CN GL+ 
Sbjct: 598 SKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVE 657

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M K G  PNV+ +  LI G+CK G++  A   + EM + N+ PN  TY  +I
Sbjct: 658 DAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMI 717

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY ++GN E   +L  +M  +GI  D++TYN L  G CK      A  +   +    L 
Sbjct: 718 DGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLP 777

Query: 436 PNASTYSALITG 447
            +  TY+ L+ G
Sbjct: 778 VDEITYTTLVHG 789



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 145/324 (44%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   GF P +   N  +        ++ AL     M    I+P   TL  +M  FCK  
Sbjct: 315 EMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSD 374

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            IE A    + + S G         +++   C K     A +F  +M     +P+ +   
Sbjct: 375 QIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLT 434

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+ G CK GK  EA  ++  +       + VT N LI+G    G     + + +EML  
Sbjct: 435 MLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLER 494

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+ +D +TYNALILG C EGK +    L +++ K  + P+  TY+ L+ G C     + A
Sbjct: 495 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+     SG   N H + ++M  +C+    +    +  E+L K M  +SI+ + +   
Sbjct: 555 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA 614

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G    A++L   M+ +G+LP
Sbjct: 615 HCQNGNVAAALQLLENMKSKGILP 638



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 171/388 (44%), Gaps = 6/388 (1%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
            K+  +++ G++  + FD  + + D ++ +    + + +VF+ L   Y        A   
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGF--NPNVVVFNNLIDGYCKMGNIEGALKI 347

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
              M      P   +    +     S++++ A    +E+  + +S +      V+H  CK
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--LLSLAMKFKNLMEKNGIQPNV 333
                 A    K M S  F PS      L+ G C  G  L +  + F+ L+EK G   + 
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFR-LLEK-GSPASK 465

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +T N LI G C  GKL EA+RI  EM    +  + +TYN LI G+   G  E    L EE
Sbjct: 466 VTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREE 525

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M + GI+ DI TYN L+ GLC  GK   A  L  +   + L+ N  TY  ++ G C    
Sbjct: 526 MTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANR 585

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E    L+  ++      N  ++ +++   CQN +   A ++L  M  K + P+    S 
Sbjct: 586 IEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSS 645

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G+ + G  E A  L  +M   G +P
Sbjct: 646 LIHGVCNIGLVEDAKHLIDEMRKEGFVP 673



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 105/217 (48%), Gaps = 2/217 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   ++  +    LF+ +L S +M + + +V++++ K +        A      M+ 
Sbjct: 576 MMEGYCKANRIEDVENLFNELL-SKKM-ELNSIVYNIIIKAHCQNGNVAAALQLLENMKS 633

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G LP   + +  +  + +   V+ A     EMR+    PNV     ++  +CKLG ++ 
Sbjct: 634 KGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDT 693

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A   +  M S    P+  TY  +I G+C  G +  A      M+++GI P+V+T+N L  
Sbjct: 694 AESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTN 753

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           GFCK   +  A ++  +M    +  + +TY TL++G+
Sbjct: 754 GFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 12/183 (6%)

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           ++  G   D+ ++  +I  LCK GK + A  L   ++K  + PN  TY+ +I G C    
Sbjct: 211 VMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            + AF+L + M   G +PN   +  L++   +   FD+   +L EM+     P+ ++ + 
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCAPENGEKE--SG 562
           L  G    G  E A+K+   M  + + P         +GF K   I  A EN  +E  S 
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHA-ENALEEILSS 389

Query: 563 GLS 565
           GLS
Sbjct: 390 GLS 392


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/376 (26%), Positives = 184/376 (48%), Gaps = 3/376 (0%)

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
           + S+++G     + D    LF+ I         + + + +L +   +      A++ + Q
Sbjct: 328 ATSLMKGYCAQGNLDSALNLFNKITEDGLF--PNKVTYSVLIEGCCNSGNIEKASELYTQ 385

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + N  L   L +   + A   + E     ++ N++T N++M   CK G 
Sbjct: 386 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGK 444

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A  +  NM + G +P+V +YN +I GHC KG + +A    + M    ++PNV+T++ 
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSI 504

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G  KKG   +A  +F +M + N++P   T+NT+ING  +VG         +  L  G
Sbjct: 505 LIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEG 564

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                +TYN+++ G  KEG    A  + +++ +  + PN  TY++LI G C     + A 
Sbjct: 565 FIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +    M   G   +   +  L+  FC+  D + A ++  E+LE  ++P+ I+ + + SG 
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684

Query: 519 HHCGKDELAMKLFRKM 534
                 E A+  ++KM
Sbjct: 685 RDLNNMEAALVWYKKM 700



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 170/347 (48%), Gaps = 2/347 (0%)

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           + D+ S +F  +L   R    + + + +L      +     A D F QM      P   +
Sbjct: 479 NMDMASSVFSDMLA--RDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFT 536

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  ++ L    ++  A    K        P+  T N ++  F K G I+ A+ V++ M 
Sbjct: 537 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 596

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P+V TY +LI+G C    + LA+K ++ M + G++ +V  ++ LI GFCK+  + 
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +F E+    +SPN + YN++I+G+  + N E     Y++M+ + I  D+ TY  LI
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GL KEG+   A+ L  ++    +VP+  T+  L+ G C +   E A ++ + M R    
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           P+  I+  L++ + +  +   A  +  EML++ + PD +    L +G
Sbjct: 777 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 150/302 (49%), Gaps = 3/302 (0%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           DSE+   AL  + +M    I+P  +T N +++  CK+G +  A +  KN    GFIPS  
Sbjct: 514 DSEK---ALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYN+++ G   +G +  A+     M + G+ PNV+T+ +LI GFCK  ++  A +   EM
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           +   +  +V  Y+ LI+G+ +  + E    L+ E+L  G+  + + YN++I G       
Sbjct: 631 REKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNM 690

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           + A    K +  + +  +  TY+ LI G         A  LY  M+  G  P+   F +L
Sbjct: 691 EAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVL 750

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           ++  C     + A ++L EM  K M P  +I + L +G    G  + A  L  +M  RGL
Sbjct: 751 VNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGL 810

Query: 540 LP 541
           +P
Sbjct: 811 VP 812



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/482 (24%), Positives = 209/482 (43%), Gaps = 33/482 (6%)

Query: 105 TPFRVKHV---LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN-RKFKSSE 160
           TP    HV   LL    D   +L +F   +T +     ++ + ++LHIL ++      + 
Sbjct: 56  TPLSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHAR 115

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDS--SPLVFDLLFKTYAHRKKFRNATDTFCQ 218
            +L   +  DS   P    D ++   +  D      VF+ L   Y    +  NA D F  
Sbjct: 116 KLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNA 175

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M     +P +   N  L++L+    +      Y +M    I  + +T+++++ A  K G 
Sbjct: 176 MICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGR 235

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A E F+  +  G       Y+ +I   C K   +L ++    M++ G  P+  TF +
Sbjct: 236 VEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTS 295

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I     +G + EA R+  EM       N+V   +L+ GY   GN +   +L+ ++  +G
Sbjct: 296 VIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDG 355

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  + +TY+ LI G C  G  +KA+ L   +  N + P+    ++L+ G       E A 
Sbjct: 356 LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS 415

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L+   +  G   N   + ++MS  C+    D A  +L  M+ + M P+ +  +++  G 
Sbjct: 416 KLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILG- 473

Query: 519 HHC--GKDELAMKLFRKMEIRGLLP--------------KG--------FDKLRTINCAP 554
            HC  G  ++A  +F  M  R L P              KG        FD++ ++N AP
Sbjct: 474 -HCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAP 532

Query: 555 EN 556
            +
Sbjct: 533 TD 534



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 130/257 (50%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++ +   +       +A   + +M ++G  P + +    ++    S R+D+AL   
Sbjct: 568 SCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTR 627

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EMR   +  +V   + ++  FCK   +E A ++F  +  +G  P+   YN++ISG  + 
Sbjct: 628 DEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDL 687

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  A+ +   M  + I  ++ T+ TLI G  K+G+L  A+ ++ EM +  + P+++T+
Sbjct: 688 NNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITF 747

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + L+NG    G  E    + EEM R  +   +L YN LI G  +EG  K+A  L  ++  
Sbjct: 748 HVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 807

Query: 432 NSLVPNASTYSALITGQ 448
             LVP+  TY  LI G+
Sbjct: 808 RGLVPDDVTYDILINGK 824


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/334 (32%), Positives = 155/334 (46%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A   F +M + G      + +  + S      +D A+GF  +M +  I   VY  N
Sbjct: 207 KFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYN 266

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++ +CKLG    A   F  M   G  P+V TY +LISG+CN+G    A K  N M   
Sbjct: 267 SLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAK 326

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI PN  TF  +I G C+   + EA R+F EMK   + P+ VTYN +I G+ + GN    
Sbjct: 327 GISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEA 386

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L +EM+  G   D  TY  LI GLC  G+  +A   V DL K+    N   YSAL+ G
Sbjct: 387 FHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHG 446

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A    + M+  G   +   + +L+    +  D      +L EM    + PD
Sbjct: 447 YCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPD 506

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++I + +       G  + A  L+  M   G LP
Sbjct: 507 AVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLP 540



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 150/326 (46%), Gaps = 1/326 (0%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M D G  P + +    +S   +      A   Y EM    ISPN YT   ++   C+
Sbjct: 285 FDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCR 344

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
             ++  A+ +F  M+    +PS  TYN +I GHC  G +S A    + M   G  P+  T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  LI G C  G++ EA     ++   +   N + Y+ L++GY + G  +   S    M+
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+ +D++ Y  LI G  +E  T+    L+K++  + L P+A  Y+ +I       N +
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            AF L+  M+  GC PN   +  L++  C+    D+A  +  E L   + P+ I      
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
             L   G  E A++L   M ++G L 
Sbjct: 585 DHLTRGGNMEKAVQLHHAM-LKGFLA 609



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 152/326 (46%), Gaps = 9/326 (2%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+D   +P + + +  L+ LL   R +  L  + ++    + P++Y  + V+ + C+L  
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
             +A E+   ME      S+  YN LI G C    +  A++ KN + + G++ NV+T+  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY-- 204

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                   GK +EA  +F EM    +  N +TY+ LI+ + + G  +      ++M +  
Sbjct: 205 -------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I+  +  YN+LI G CK G    A Y   ++    L P   TY++LI+G C      +AF
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++Y  M   G  PN + F  ++S  C+      A  +  EM E+ + P  +  + +  G 
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G    A  L  +M  +G +P  +
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTY 403



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 156/353 (44%), Gaps = 36/353 (10%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++++ + +        A     +M   GF+P   +    +S L    RV  A  F 
Sbjct: 366 SEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFV 425

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLG-----------IIERAVE---------------- 284
            ++ ++    N    + ++H +CK G           ++ER V                 
Sbjct: 426 DDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTARE 485

Query: 285 --------VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
                   + K M + G  P    Y  +I  H   G L  A    ++M   G  PNV+T+
Sbjct: 486 HDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTY 545

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             LI G CK G + +A  +  E   ++V+PN +TY   ++   + GN E    L+  ML+
Sbjct: 546 TALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK 605

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G     ++YN LI G C+ GK ++A  L+  +  N ++P+  TYS +I  QC R N + 
Sbjct: 606 -GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQE 664

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           A +L+ +M+  G +P+   +  L+   C   + ++A E+  EM+ + M  + +
Sbjct: 665 AIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHV 717



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 170/380 (44%), Gaps = 40/380 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y +  ++  A   + +M   G  P   +    +S L  +  +  A+  + EM+  +
Sbjct: 303 LISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERK 362

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I P+  T N+++   C+ G I  A  +   M   GF+P   TY  LISG C+ G +S A 
Sbjct: 363 IMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAK 422

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKL----------------------------- 349
           +F + + K+  + N + ++ L+ G+CK+G+                              
Sbjct: 423 EFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGT 482

Query: 350 ---HEANRIFS---EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
              H+   +F    EM    + P+ V Y  +I+ + + GN +    L++ M+  G   ++
Sbjct: 483 AREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNV 542

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           +TY ALI GLCK G   KA  L K+   + + PN  TY   +       N E+A QL+ +
Sbjct: 543 VTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHA 602

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M++ G       + +L+  FC+    + A ++L  M +  + PD I  S +      C +
Sbjct: 603 MLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTII--YEQCKR 659

Query: 524 DEL--AMKLFRKMEIRGLLP 541
             L  A+KL+  M  +GL P
Sbjct: 660 SNLQEAIKLWHTMLDKGLKP 679



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 1/194 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G +  M      PNV T   +++  CK G++++A  + K        P+  TY   + 
Sbjct: 526 AFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLD 585

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
                G +  A++  + M K G     +++N LI GFC+ GK+ EA ++   M   ++ P
Sbjct: 586 HLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILP 644

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TY+T+I    +  N +    L+  ML  G+K D L Y+ L+ G C  G+ +KA  L 
Sbjct: 645 DYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELR 704

Query: 427 KDLDKNSLVPNAST 440
            ++ +  +  N  T
Sbjct: 705 DEMIRRGMRSNHVT 718



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 1/187 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D G LP + +    ++ L  +  +D A    KE   + ++PN  T    +    + G 
Sbjct: 533 MVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGN 592

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E+AV++   M   GF+ +  +YN LI G C  G +  A K  + M  N I P+ IT++T
Sbjct: 593 MEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYST 651

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I+  CK+  L EA +++  M    + P+ + Y+ L++G    G  E    L +EM+R G
Sbjct: 652 IIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRG 711

Query: 399 IKVDILT 405
           ++ + +T
Sbjct: 712 MRSNHVT 718



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 114/263 (43%), Gaps = 26/263 (9%)

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           H +K L+ L++    LM+   + P V T + L+ G  +  + ++   +F ++ + NV P+
Sbjct: 71  HVDKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPD 130

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE----------- 416
           +  Y+ ++    ++ +      +   M  N  K+ I+ YN LI GLCK            
Sbjct: 131 IYIYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKN 190

Query: 417 ---------------GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
                          GK  +A  L K++ +  L  N  TYS LI   C R   + A    
Sbjct: 191 CLMQKGLEANVVTYYGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFL 250

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M ++      + +  L++ +C+  +   A     EM++K + P  +  + L SG  + 
Sbjct: 251 DKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNE 310

Query: 522 GKDELAMKLFRKMEIRGLLPKGF 544
           G+   A K++ +M  +G+ P  +
Sbjct: 311 GEWHKAFKVYNEMTAKGISPNTY 333


>gi|255546727|ref|XP_002514422.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546418|gb|EEF47918.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 809

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 176/380 (46%), Gaps = 35/380 (9%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V D L K       F  A D   Q +  GF P I SCN  ++ L++S +VD+A+  Y+++
Sbjct: 151 VSDALIKVCVASGMFDQAFDVLLQTKHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQL 210

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +   ++PN YT  + +  FC+ G +  A++VF++ME  G  P+  +Y T I G C  G  
Sbjct: 211 KAFGLNPNDYTYTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRS 270

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            L  K    +    I  +V  +  +I GFC + KL EA  I  EM+    +P+V  Y  L
Sbjct: 271 DLGFKVLQDVINAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCAL 330

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKV--------------------------------- 401
           I+GY  VGN     +L++EM+  G+K                                  
Sbjct: 331 ISGYCMVGNLLKALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGI 390

Query: 402 --DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D   YN ++  LCK GK ++A  L+ ++    +VP+   Y+ +I+G  ++     A  
Sbjct: 391 FFDEACYNVVMDALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALN 450

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           +Y+ M   G +P+   + +L   F +N     A  +L  M  + + PD++  + +  GL 
Sbjct: 451 IYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLC 510

Query: 520 HCGKDELAMKLFRKMEIRGL 539
             GK + A   F  +E + L
Sbjct: 511 IGGKVDDAQAFFDNLEEKCL 530



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/412 (24%), Positives = 167/412 (40%), Gaps = 66/412 (16%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +  K +  +     A D F  M + G  P   S   F+  L    R D+     +++ 
Sbjct: 222 YTIAIKGFCRKGNLAEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDVI 281

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
             +I  +V+   +V+  FC    ++ A  + + ME  GF P V  Y  LISG+C  G L 
Sbjct: 282 NAKIPMDVFAYTVVIRGFCSEMKLKEAESILREMEKQGFAPDVYVYCALISGYCMVGNLL 341

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFG--------------------------------- 342
            A+   + M   G++ N +  ++++ G                                 
Sbjct: 342 KALALHDEMVSKGVKTNCVILSSILQGLSQMGMASEVANQFKEFKKMGIFFDEACYNVVM 401

Query: 343 --FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK GK+ EA  +  EMK   + P+++ Y T+I+GY   G      ++Y EM   G K
Sbjct: 402 DALCKLGKVEEAVELLVEMKGKKMVPDIINYTTVISGYFLKGKVVDALNIYREMKDIGHK 461

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN------- 453
            DI+TYN L  G  + G T++A  L+  ++   + P+  T++ +I G C+          
Sbjct: 462 PDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPDTVTHNMIIEGLCIGGKVDDAQAF 521

Query: 454 ----SERAFQLYKSMIRSGCRPN--------------------KHIFEMLMSTFCQNEDF 489
                E+  + Y +M+   C  N                    K  F  L+   C   D 
Sbjct: 522 FDNLEEKCLENYSAMVNGYCEANHVNKAFALLIRLSKQGRILKKASFFKLLGNLCSEGDS 581

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++A  +L  M+   + P  I+ S++   L   G+ E A  +F  +  RGL P
Sbjct: 582 EKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAP 633



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/355 (22%), Positives = 158/355 (44%), Gaps = 21/355 (5%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y  + K  +A + + +M+D G  P I + N        +     AL     M    + P+
Sbjct: 439 YFLKGKVVDALNIYREMKDIGHKPDIVTYNVLAGGFSRNGLTQEALSLLNYMETQGVKPD 498

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
             T NM++   C  G ++ A   F N+E       +  Y+ +++G+C    ++ A     
Sbjct: 499 TVTHNMIIEGLCIGGKVDDAQAFFDNLEE----KCLENYSAMVNGYCEANHVNKAFALLI 554

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            + K G      +F  L+   C +G   +A  +   M A N++P ++ Y+ +I    Q G
Sbjct: 555 RLSKQGRILKKASFFKLLGNLCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAG 614

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             E    ++  ++  G+  D++TY  +I G C+  K K+A +++ D+    + P+  TY+
Sbjct: 615 EMEKAQYVFNMLVDRGLAPDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYT 674

Query: 443 ALITGQCVR-------------KNSERAFQ---LYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            L+   C +             K+ E       L+  M     +P+   + +L+   C+ 
Sbjct: 675 VLLN-NCSKIDLRSSSSSLDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKT 733

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +   A  +  EM+++ +APD++  + L SG  + G  + A+ LF +M  +G+ P
Sbjct: 734 NNIQDAINLFNEMIDRGLAPDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRP 788



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 15/222 (6%)

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
            C  G  E+A+ + + M ++   P++  Y+ +I      G +  A    N++   G+ P+
Sbjct: 575 LCSEGDSEKALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGLAPD 634

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG---------- 382
           VIT+  +I G+C+  K+ EA  +  +MK   + P+V+TY  L+N   ++           
Sbjct: 635 VITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDA 694

Query: 383 -----NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
                N    ++L+ EM    IK D++ Y  LI   CK    + A  L  ++    L P+
Sbjct: 695 MKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPD 754

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             TY+AL++G C   N ++A  L+  M+  G RP+ H   +L
Sbjct: 755 TVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 112/233 (48%), Gaps = 21/233 (9%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           L S  DSE+   AL   + M    I+P +   + V+ A  + G +E+A  VF  +   G 
Sbjct: 575 LCSEGDSEK---ALCLLETMVALNINPTMIMYSKVIGALFQAGEMEKAQYVFNMLVDRGL 631

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK--------- 345
            P V TY  +I+G+C    +  A      M+  GI+P+VIT+  L+    K         
Sbjct: 632 APDVITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSS 691

Query: 346 ------KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
                 K  + + + ++SEMK  ++ P+V+ Y  LI+ + +  N +   +L+ EM+  G+
Sbjct: 692 LDAMKSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGL 751

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
             D +TY AL+ G C  G  KKA  L  ++    + P+A T S L    C+ K
Sbjct: 752 APDTVTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL---HCILK 801



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 15/161 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-------IIESCNKF--------LSSL 238
           + + ++   Y    K + A      M++ G  P       ++ +C+K         L ++
Sbjct: 636 ITYTIMINGYCRMNKMKEAWHVLGDMKNRGIEPDVITYTVLLNNCSKIDLRSSSSSLDAM 695

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
              E +      + EM+   I P+V    +++   CK   I+ A+ +F  M   G  P  
Sbjct: 696 KSKENMMDPSALWSEMKDMDIKPDVICYTVLIDKHCKTNNIQDAINLFNEMIDRGLAPDT 755

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            TY  L+SG+CN G +  A+   + M   GI+P+  T + L
Sbjct: 756 VTYTALLSGYCNVGNIKKAVVLFDEMLNKGIRPDAHTMSVL 796



 Score = 40.8 bits (94), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 43/225 (19%), Positives = 87/225 (38%), Gaps = 23/225 (10%)

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           SLA  + N ++++G   +  T+  ++   C  G   + + I  E+   +           
Sbjct: 74  SLAFSYFNQLKESGYSHDPYTYAAIVRILCFWGWSRKLDSILMEIIKKD----------- 122

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIK-----VDILTYNALILGLCKEGKTKKAAYLVKDL 429
                  GN + G     E L +GI      V +   +ALI      G   +A  ++   
Sbjct: 123 -------GNLDFGIVNLFEALGDGIANESFSVLVQVSDALIKVCVASGMFDQAFDVLLQT 175

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                 P   + + L+      +  + A  +Y+ +   G  PN + + + +  FC+  + 
Sbjct: 176 KHCGFAPQILSCNFLMNRLVESRKVDMAIAIYRQLKAFGLNPNDYTYTIAIKGFCRKGNL 235

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             A +V  +M E  + P+S   +    GL   G+ +L  K+ + +
Sbjct: 236 AEAIDVFRDMEESGVTPNSFSYTTFIEGLCLHGRSDLGFKVLQDV 280


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R  R  PN +T   ++H  CK G +++A E+   M   G  P V  +N +I G C  G  
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRF 81

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNT 373
             A+ +   +      P++ITFN L+    K G++ EA +IF  M  ++   PNVVTY T
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  + G  +    L + M   G   +++TY+ L+ GLCK G+T K   L++++ +  
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   Y+ L+ G C  +  + A +L + MIRSGC P    +  LM  FC+++  DRA 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++  M E+   PD I  + + +GL    + + A  L ++M     +P
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 7/359 (1%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+    C  +   +  L        K   A +   +MRD G  P +   N  +  L  + 
Sbjct: 20  LFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAG 79

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME-SMGFIPSVTTY 301
           R   ALG++K +   + +P++ T N+++ A  K G +E A ++F++M  S   +P+V TY
Sbjct: 80  RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            T+I+G C  G L  A++  +LM + G  PNVIT++ L+ G CK G+  +   +  EM  
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               P+V+ YNTL+NG  +    +    L + M+R+G    ++TYN+L+   C+  +  +
Sbjct: 200 RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ + +    P+   Y+ +I G C     + A  L K M+ + C P+   +  ++ 
Sbjct: 260 AFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID 319

Query: 482 TFCQNEDFD------RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             C++   D       A E+L  M +    P++   + +  GL    K + A+ L R+M
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 8/327 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
              +  L  + ++D A     EMR   I P V   N V+   CK G    A+  FK +  
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAG 93

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
               P + T+N L+      G +  A + F+++   +   PNV+T+ T+I G CK GKL 
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +   M  T   PNV+TY+ L+ G  + G ++ G +L +EM R G + D++ YN L+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK  +  +A  LV+ + ++   P   TY++L+   C  K  +RAF+L + M   GC 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   +  +++  C++   D A  +L +M+     PD I  S +  GL    + +   KL
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 531 FRKMEIRGLLPKGFDKLRTINCAPENG 557
               EI        + ++   C P  G
Sbjct: 334 EAACEI-------LEMMKQTGCPPNAG 353



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 182/381 (47%), Gaps = 9/381 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            +++G+  +  F      F ++  +   C    + F++L        +   A   F  M 
Sbjct: 70  GVIKGLCKAGRFGDALGYFKTV--AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127

Query: 221 DYG-FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
                LP + +    ++ L    ++D A+     M      PNV T ++++   CK G  
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++   + + M   GF P V  YNTL++G C    L  A++   LM ++G  P V+T+N+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +  FC+  ++  A R+   M      P+V+ YNT+I G  +    +   +L ++M+    
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 400 KVDILTYNALILGLCK------EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
             D++TY+ +I GLCK      + K + A  +++ + +    PNA TY+ +I G C  + 
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           S++A  L + MI S   P+   F M++ + C++ D D A ++   M E+   P+ +  + 
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427

Query: 514 LYSGLHHCGKDELAMKLFRKM 534
           L  GL   G+ + A+++F  M
Sbjct: 428 LIDGLSKGGEVDKAVRVFELM 448



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 179/402 (44%), Gaps = 41/402 (10%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++F+S +++   C  + + +  +        K   A +    M + G  P + + +  + 
Sbjct: 121 QIFES-MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L  + R D      +EM R    P+V   N +++  CK   ++ A+E+ + M   G  P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TYN+L+   C    +  A +   +M + G  P+VI +NT+I G C+  +L +A  + 
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNS------EMGASLYEEMLRNGIKVDILTYNALI 410
            +M A    P+V+TY+T+I+G  +          E    + E M + G   +  TY  +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLC+  K+++A  L++ +  + +VP+ S++S +I   C   + + A++++  M    C+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 471 PNK--------------------HIFEMLMSTF--------------CQNEDFDRAAEVL 496
           PN                      +FE+++ +F              C     + A  ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             M+ K   PD      L  GL      E A +LF+ +E +G
Sbjct: 480 EGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 9/347 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+  S   D   +L   ++ S   C  + + ++ L + +   K+   A      M 
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSG--CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII- 279
           + G  P + + N  ++ L    R+D A    K+M   R  P+V T + ++   CK   + 
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 280 -----ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                E A E+ + M+  G  P+  TY  +I G C       A+     M  + + P++ 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           +F+ +I   CK   L  A +IF  M      PN V Y  LI+G  + G  +    ++E M
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +  +  + TYN+++ GLC  G+ ++A  +V+ +      P+ ++Y ALI G C     
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           E A++L++++   G      ++ +L++  C+ +    A  V  +++E
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 152/376 (40%), Gaps = 44/376 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D   +L D  L +   C  + + + +L +      +         +M 
Sbjct: 141 TVINGLCKDGKLDRAIELLD--LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P +   N  L+ L  S R+D AL   + M R+   P V T N +M  FC+   ++
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA  + + M   G  P V  YNT+I+G C    L  A      M      P+VIT++T+I
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 341 FGFCKKG------KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            G CK        KL  A  I   MK T   PN  TY  +I G  +   S+   +L   M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 395 LRNGIKVDI-----------------------------------LTYNALILGLCKEGKT 419
           + + +  D+                                   + Y ALI GL K G+ 
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            KA   V +L   S  P  +TY++++ G C     E A ++ + MI   C P+   +  L
Sbjct: 439 DKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 480 MSTFCQNEDFDRAAEV 495
           +   C+    + A E+
Sbjct: 498 IRGLCRVSCVEEAYEL 513



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDLPSKLFDSI 182
           T+++V+  L + RK + + ++LR ++DS+                     D   K+F   
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG-- 411

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           + S R C  +P+ +  L    +   +   A   F ++    F P + + N  L  L    
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVG 470

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R++ A+   + M      P+  +   ++   C++  +E A E+F+ +E+ GF   V  YN
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNG 328
            L++  C K  LS A    N + + G
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 179/367 (48%), Gaps = 2/367 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFDS++   +    +  ++ +L   YA +       D    M + G  P     N   ++
Sbjct: 330 LFDSMIR--KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTA 387

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                 +D A+  + +M++  +SP+V     ++ A CKLG ++ AV  F  M + G  P+
Sbjct: 388 YAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPN 447

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  +N+L+ G C       A +F   M   GI+P+V+ FNT++   C KG++ +A R+  
Sbjct: 448 IFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLID 507

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M+     P V++Y TLI G+  VG  +  A   + ML  G+K D  TYN L+ G C+ G
Sbjct: 508 LMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAG 567

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           +   A  + +++ +N + P   TYS ++ G    +    A +LY +MI SG + N  I+ 
Sbjct: 568 RIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYN 627

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           ++++   +N   D A ++   +  K    +    + +   L   G++E AM LF  +   
Sbjct: 628 IILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSY 687

Query: 538 GLLPKGF 544
           GL+P  F
Sbjct: 688 GLVPDVF 694



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 23/431 (5%)

Query: 123 SLEFFTWVQTH-KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           +L+ F  + TH +P+S+    H +        R+  ++ES           +L   LF+ 
Sbjct: 33  ALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTES-----------ELVVSLFNR 81

Query: 182 ILYSYRMCD----SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           ++   R C       P  + +L   +    +  +   TF  +   G+       N+ L  
Sbjct: 82  MI---RECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKG 138

Query: 238 LLDSERVDIALG-FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMG-- 293
           L D++R+  A+    K M     +P+V + N ++  FC     E A+E+   M +S G  
Sbjct: 139 LCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS 198

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+V +Y  +I+G   +G +  A      M   GIQPNV+T+ T+I G CK   +  A 
Sbjct: 199 CPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAE 258

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F +M    V P+  TYN LI+GY  +G  +    + EEM  +G+K D  TY +L+  L
Sbjct: 259 GVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYL 318

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  G+ ++A +L   + +  + PN + Y  LI G   +        L   M+ +G  P+ 
Sbjct: 319 CNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDH 378

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           HIF ++ + + +    D A  +  +M ++ ++PD +    L   L   G+ + A+  F +
Sbjct: 379 HIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQ 438

Query: 534 MEIRGLLPKGF 544
           M   G+ P  F
Sbjct: 439 MMNEGVAPNIF 449



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/415 (24%), Positives = 184/415 (44%), Gaps = 11/415 (2%)

Query: 126 FFTWVQTHKPSSLTLET--HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           FFT  Q  K  +L LE     I  +++T         +++ G+  +   D    +F  ++
Sbjct: 213 FFTEGQVDKAYNLFLEMMDRGIQPNVVTYT-------TVIDGLCKAQVVDRAEGVFQQMI 265

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                 D+    ++ L   Y    K++       +M  +G  P   +    L+ L ++ R
Sbjct: 266 DKGVKPDND--TYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A   +  M R  I PNV    +++H +   G +    ++   M   G  P    +N 
Sbjct: 324 CREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           + + +  K ++  AM   N M++ G+ P+V+ +  LI   CK G++ +A   F++M    
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V+PN+  +N+L+ G   V   E     Y EML  GI+ D++ +N ++  LC +G+  KA 
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+  +++    P   +Y+ LI G C+    + A +    M+  G +P++  +  L+  +
Sbjct: 504 RLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           C+    D A  V  EML   + P  +  S +  GL    +   A +L+  M   G
Sbjct: 564 CRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSG 618



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 153/330 (46%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F QM D G  P  ++ N  +   L   +    +   +EM  + + P+ YT   +++
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G    A  +F +M   G  P+V  Y  LI G+  KG LS      NLM +NG+ P
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN +   + KK  + EA  IF++MK   +SP+VV Y  LI+   ++G  +     +
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M+  G+  +I  +N+L+ GLC   K +KA     ++    + P+   ++ ++   C +
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +A +L   M R G RP    +  L+   C     D AA+ L  ML   + PD    
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L  G    G+ + A  +FR+M   G+ P
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITP 586



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/356 (26%), Positives = 153/356 (42%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD---YGFLPIIESCNKFLSSLLDSERVD 245
           C    + ++ L K + + K+   A +    M D       P + S    ++      +VD
Sbjct: 161 CTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVD 220

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   + EM    I PNV T   V+   CK  +++RA  VF+ M   G  P   TYN LI
Sbjct: 221 KAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLI 280

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+ + G     ++    M  +G++P+  T+ +L+   C  G+  EA  +F  M    + 
Sbjct: 281 HGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIK 340

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNV  Y  LI+GY   G       L   M+ NG+  D   +N +     K+    +A ++
Sbjct: 341 PNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHI 400

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + +  L P+   Y ALI   C     + A   +  M+  G  PN  +F  L+   C 
Sbjct: 401 FNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCT 460

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +++A E   EML + + PD +  + +   L   G+   A +L   ME  G  P
Sbjct: 461 VDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/358 (25%), Positives = 164/358 (45%), Gaps = 6/358 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + + ++   +    +   A + F +M D G  P + +    +  L  ++ VD 
Sbjct: 197 RSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDR 256

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G +++M    + P+  T N ++H +  +G  +  V + + M + G  P   TY +L++
Sbjct: 257 AEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLN 316

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             CN G    A    + M + GI+PNV  +  LI G+  KG L E + + + M    +SP
Sbjct: 317 YLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSP 376

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +   +N +   Y +    +    ++ +M + G+  D++ Y ALI  LCK G+   A    
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + PN   +++L+ G C     E+A + Y  M+  G RP+   F  ++   C  
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 487 EDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
               + A+ L++++E+    P  I  + L  G  HC  G+ + A K    M   GL P
Sbjct: 497 GQVMK-AQRLIDLMERVGTRPGVISYTTLIGG--HCLVGRIDEAAKSLDVMLSVGLKP 551



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/379 (25%), Positives = 161/379 (42%), Gaps = 72/379 (18%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F+++F  YA +     A   F +M+  G  P + +    + +L    RVD A+  + +M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVE--------------VFKN------------ 288
               ++PN++  N +++  C +   E+A E              VF N            
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 289 ---------MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                    ME +G  P V +Y TLI GHC  G +  A K  ++M   G++P+  T+NTL
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG- 398
           + G+C+ G++ +A  +F EM    ++P VVTY+T+++G            LY  M+ +G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 399 ----------------------------------IKVDILTYNALILGLCKEGKTKKAAY 424
                                              +++I T+N +I  L K G+ + A +
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAF-QLYKSMIRSGCRPNKHIFEMLMSTF 483
           L   +    LVP+  TY  LI    + +     F  L+ +M +SG  PN  +   L+   
Sbjct: 680 LFATISSYGLVPDVFTY-CLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRL 738

Query: 484 CQNEDFDRAAEVLLEMLEK 502
               D  RA   L ++ EK
Sbjct: 739 LHRGDITRAGAYLCKLDEK 757



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 4/233 (1%)

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN-SEMG 387
           + P+  T++ LI  FC+ G+L      F  +  +    N +  N L+ G        E  
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA---YLVKDLDKNSLVPNASTYSAL 444
             L + M   G   D+++YN L+ G C E + ++A    +++ D    S  PN  +Y+ +
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G       ++A+ L+  M+  G +PN   +  ++   C+ +  DRA  V  +M++K +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGV 269

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
            PD+   + L  G    GK +  +++  +M   GL P  +     +N    NG
Sbjct: 270 KPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 112/241 (46%), Gaps = 4/241 (1%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A  +   M   G  P   + N  L     + R+D A G ++EM RN I+P V T +
Sbjct: 533 RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYS 592

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEK 326
            ++H          A E++ NM + G   ++  YN +++G      +  A K F++L  K
Sbjct: 593 TILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +  Q  + TFN +I    K G+  +A  +F+ + +  + P+V TY  +     + G  E 
Sbjct: 653 D-FQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGK-TKKAAYLVKDLDKNSLVPNASTYSALI 445
              L+  M ++G   +    NAL+  L   G  T+  AYL K LD+ +    AST + LI
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCK-LDEKNFSLEASTTAMLI 770

Query: 446 T 446
           +
Sbjct: 771 S 771



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 69/170 (40%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++F  A + +  M   G    I   N  L+ L  +  VD A   ++ +        + T 
Sbjct: 602 RRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTF 661

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N+++ A  K G  E A+ +F  + S G +P V TY  +      +G L       + MEK
Sbjct: 662 NIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEK 721

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           +G  PN    N L+     +G +  A     ++   N S    T   LI+
Sbjct: 722 SGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 184/401 (45%), Gaps = 3/401 (0%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVF 196
           L L   + +L  L   R   S  ++L  +      D    L  ++ L  +  C  + + +
Sbjct: 59  LPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
            +L +     +    A      MR  G    + +    +  L D+  VD A+    EM  
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           + I PNV   + ++  +CK G  E   +VF  M   G  P V  Y  LI   C  G    
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    ++M + G++PNV+T+N LI   CK+G + EA  +  +M    V+P+VVTYNTLI 
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 377 GYGQVGNSEMGASLYEEMLR--NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           G   V   +    L EEM+R  N +K +++T+N++I GLC  G+ ++A  +   +++   
Sbjct: 299 GLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGC 358

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           + N  TY+ LI G        +A +L   M   G  P+   + +L+  FC+    DRA +
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED 418

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +L  M ++ + P+      L   +   G  E A  LF +M+
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 182/387 (47%), Gaps = 13/387 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D+   D   +L         MC+S    + +V+  L + Y    ++ +    F
Sbjct: 155 TLIRGLCDAAEVDKAVELMG------EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M + G  P +      + SL    +   A G    M R  + PNV T N++++  CK 
Sbjct: 209 VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKE 268

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM--EKNGIQPNVI 334
           G ++ A+ V K M   G  P V TYNTLI G  +   +  AM     M   KN ++PNV+
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVV 328

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN++I G C  G++ +A ++ + M+ T    N+VTYN LI G  +V        L +EM
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G++ D  TY+ LI G CK  +  +A  L+  +    + P    Y  L+   C +   
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           ERA  L+  M  +    +   +  ++   C+  D   A E+L  ++++ + PD++  S +
Sbjct: 449 ERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIV 507

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +     G  E A  + ++M   G LP
Sbjct: 508 INMFAKSGDMEAANGVLKQMTASGFLP 534



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 2/286 (0%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN  +  ++M A C   + ++AV + ++M S G    V TY TLI G C+   +  A++ 
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M ++GI+PNV+ +++L+ G+CK G+  +  ++F EM    + P+VV Y  LI+   +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           VG ++    + + M+R G++ +++TYN LI  +CKEG  K+A  ++K + +  + P+  T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           Y+ LI G       + A  L + M+R     +PN   F  ++   C      +A +V   
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           M E     + +  + L  GL    K   AM+L  +M   GL P  F
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 3/327 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L          + A     +M + G  P + + N  +  L D   +D A+   +E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 254 MRR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           M R  N + PNV T N V+   C +G + +A +V   ME  G + ++ TYN LI G    
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  AM+  + M   G++P+  T++ LI GFCK  ++  A  + S M+   + P +  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L+    + G  E   +L+ EM  N   +D++ Y+ +I G CK G  K A  L+K +  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L P+A TYS +I       + E A  + K M  SG  P+  +F+ L+  +    + ++
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGL 518
             E++ EM+ K +A DS I+S L + L
Sbjct: 555 VLELIREMITKNIALDSKIISTLSTSL 581



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 1/214 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++LL        K R A +   +M   G  P   + +  +       +VD A 
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                MR   I P ++    ++ A C+ G++ERA  +F  M++  F   V  Y+T+I G 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGA 476

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A +    +   G+ P+ +T++ +I  F K G +  AN +  +M A+   P+V
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             +++LI GY   G       L  EM+   I +D
Sbjct: 537 AVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 4/202 (1%)

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRN---GIKVDILTYNALILGLCKEGKTKKAA 423
           + V+YNT++    + G+ +   +L   M        + + ++Y  L+  LC +    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++ +    +  +  TY  LI G C     ++A +L   M  SG  PN  ++  L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C++  ++   +V +EM EK + PD ++ + L   L   GK + A  +   M  RGL P  
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 544 FDKLRTINCAPENGE-KESGGL 564
                 INC  + G  KE+ G+
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGV 277


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R  R  PN +T   ++H  CK G +++A E+   M   G  P V  +N +I G C  G  
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRF 81

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNT 373
             A+ +   +      P++ITFN L+    K G++ EA +IF  M  ++   PNVVTY T
Sbjct: 82  GDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTT 141

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +ING  + G  +    L + M   G   +++TY+ L+ GLCK G+T K   L++++ +  
Sbjct: 142 VINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRG 201

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+   Y+ L+ G C  +  + A +L + MIRSGC P    +  LM  FC+++  DRA 
Sbjct: 202 FQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAF 261

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++  M E+   PD I  + + +GL    + + A  L ++M     +P
Sbjct: 262 RLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 175/359 (48%), Gaps = 7/359 (1%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+    C  +   +  L        K   A +   +MRD G  P +   N  +  L  + 
Sbjct: 20  LFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAG 79

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME-SMGFIPSVTTY 301
           R   ALG++K +   + +P++ T N+++ A  K G +E A ++F++M  S   +P+V TY
Sbjct: 80  RFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTY 139

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            T+I+G C  G L  A++  +LM + G  PNVIT++ L+ G CK G+  +   +  EM  
Sbjct: 140 TTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR 199

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               P+V+ YNTL+NG  +    +    L + M+R+G    ++TYN+L+   C+  +  +
Sbjct: 200 RGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR 259

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ + +    P+   Y+ +I G C     + A  L K M+ + C P+   +  ++ 
Sbjct: 260 AFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIID 319

Query: 482 TFCQNEDFD------RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             C++   D       A E+L  M +    P++   + +  GL    K + A+ L R+M
Sbjct: 320 GLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 182/381 (47%), Gaps = 9/381 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            ++RG+  +  F      F ++  +   C    + F++L        +   A   F  M 
Sbjct: 70  GVIRGLCKAGRFGDALGYFKTVAGT--KCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127

Query: 221 DYG-FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
                LP + +    ++ L    ++D A+     M      PNV T ++++   CK G  
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++   + + M   GF P V  YNTL++G C    L  A++   LM ++G  P V+T+N+L
Sbjct: 188 DKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSL 247

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +  FC+  ++  A R+   M      P+V+ YNT+I G  +    +   +L ++M+    
Sbjct: 248 MELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARC 307

Query: 400 KVDILTYNALILGLCK------EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
             D++TY+ +I GLCK      + K + A  +++ + +    PNA TY+ +I G C  + 
Sbjct: 308 VPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARK 367

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
           S++A  L + MI S   P+   F M++ + C++ D D A ++   M E+   P+ +  + 
Sbjct: 368 SQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAA 427

Query: 514 LYSGLHHCGKDELAMKLFRKM 534
           L  GL   G+ + A+++F  M
Sbjct: 428 LIDGLSKGGEVDKAVRVFELM 448



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 156/327 (47%), Gaps = 8/327 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
              +  L  + ++D A     EMR   I P V   N V+   CK G    A+  FK +  
Sbjct: 34  GSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAG 93

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
               P + T+N L+      G +  A + F+++   +   PNV+T+ T+I G CK GKL 
Sbjct: 94  TKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLD 153

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  +   M  T   PNV+TY+ L+ G  + G ++ G +L +EM R G + D++ YN L+
Sbjct: 154 RAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLL 213

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK  +  +A  LV+ + ++   P   TY++L+   C  K  +RAF+L + M   GC 
Sbjct: 214 NGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCP 273

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   +  +++  C++   D A  +L +M+     PD I  S +  GL    + +   KL
Sbjct: 274 PDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKL 333

Query: 531 FRKMEIRGLLPKGFDKLRTINCAPENG 557
               EI        + ++   C P  G
Sbjct: 334 EAACEI-------LEMMKQTGCPPNAG 353



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 179/402 (44%), Gaps = 41/402 (10%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++F+S +++   C  + + +  +        K   A +    M + G  P + + +  + 
Sbjct: 121 QIFES-MHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVE 179

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L  + R D      +EM R    P+V   N +++  CK   ++ A+E+ + M   G  P
Sbjct: 180 GLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYP 239

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TYN+L+   C    +  A +   +M + G  P+VI +NT+I G C+  +L +A  + 
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNS------EMGASLYEEMLRNGIKVDILTYNALI 410
            +M A    P+V+TY+T+I+G  +          E    + E M + G   +  TY  +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLC+  K+++A  L++ +  + +VP+ S++S +I   C   + + A++++  M    C+
Sbjct: 360 EGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECK 419

Query: 471 PNK--------------------HIFEMLMSTF--------------CQNEDFDRAAEVL 496
           PN                      +FE+++ +F              C     + A  ++
Sbjct: 420 PNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMV 479

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             M+ K   PD      L  GL      E A +LF+ +E +G
Sbjct: 480 EGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 9/347 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G+  S   D   +L   ++ S   C  + + ++ L + +   K+   A      M 
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSG--CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII- 279
           + G  P + + N  ++ L    R+D A    K+M   R  P+V T + ++   CK   + 
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 280 -----ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
                E A E+ + M+  G  P+  TY  +I G C       A+     M  + + P++ 
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           +F+ +I   CK   L  A +IF  M      PN V Y  LI+G  + G  +    ++E M
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +  +  + TYN+++ GLC  G+ ++A  +V+ +      P+ ++Y ALI G C     
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCV 507

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           E A++L++++   G      ++ +L++  C+ +    A  V  +++E
Sbjct: 508 EEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 152/376 (40%), Gaps = 44/376 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D   +L D  L +   C  + + + +L +      +         +M 
Sbjct: 141 TVINGLCKDGKLDRAIELLD--LMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             GF P +   N  L+ L  S R+D AL   + M R+   P V T N +M  FC+   ++
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVD 258

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           RA  + + M   G  P V  YNT+I+G C    L  A      M      P+VIT++T+I
Sbjct: 259 RAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTII 318

Query: 341 FGFCKKG------KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            G CK        KL  A  I   MK T   PN  TY  +I G  +   S+   +L   M
Sbjct: 319 DGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRM 378

Query: 395 LRNGIKVDI-----------------------------------LTYNALILGLCKEGKT 419
           + + +  D+                                   + Y ALI GL K G+ 
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            KA   V +L   S  P  +TY++++ G C     E A ++ + MI   C P+   +  L
Sbjct: 439 DKAVR-VFELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 480 MSTFCQNEDFDRAAEV 495
           +   C+    + A E+
Sbjct: 498 IRGLCRVSCVEEAYEL 513



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSD-------------------SFDLPSKLFDSI 182
           T+++V+  L + RK + + ++LR ++DS+                     D   K+F   
Sbjct: 354 TYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFG-- 411

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           + S R C  +P+ +  L    +   +   A   F ++    F P + + N  L  L    
Sbjct: 412 MMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVG 470

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R++ A+   + M      P+  +   ++   C++  +E A E+F+ +E+ GF   V  YN
Sbjct: 471 RIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYN 530

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNG 328
            L++  C K  LS A    N + + G
Sbjct: 531 VLVNELCKKKRLSDAHGVANKLIEAG 556


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 219/493 (44%), Gaps = 47/493 (9%)

Query: 87  SHLIHS-DW---KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLET 142
           S+LI+  +W   K L +L++H+TP     ++     +  L + FF WV         L+ 
Sbjct: 46  SNLINKPNWEHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDG 105

Query: 143 HSIVLHILTKNRKFKSSESI-----------------LRGILDSD-------SFDLPSKL 178
              +L +L     F  ++                   L G LD         S+   S L
Sbjct: 106 RIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTL 165

Query: 179 ----------FDSILYSYRMCDSSPLVFDLLFKTYAH---RKKFRNATDTFC-QMRDYGF 224
                     F + L   RM +   ++  + ++T  +   +  F  A + FC ++   GF
Sbjct: 166 LMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 225

Query: 225 LPIIESCNKFLSSLLDSERVDIALGF--YKEM-RRNRISPNVYTLNMVMHAFCKLGIIER 281
                 C   +  L +  R D+   F  +++M +     PN  T ++++H  C+ G +E 
Sbjct: 226 GLDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 283

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A ++ + M   G  PS  TY  LI   C+ G+   AMK  + M      PNV T+  LI 
Sbjct: 284 AFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 343

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C++GK+ EAN +F +M    + P ++T+N LINGY + G       L   M +   K 
Sbjct: 344 RLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKP 403

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I TYN L+ GLC+  K+ KA  L++ +  N L+P+  TY+ L+ G C       AF ++
Sbjct: 404 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 463

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM  +G  P+   F  L+   C+    ++A  +L  M++K ++ D +  + L  G    
Sbjct: 464 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 523

Query: 522 GKDELAMKLFRKM 534
           GK +    LF  M
Sbjct: 524 GKAKDVCFLFENM 536



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 178/374 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + +L        +   A     +M + G  P   +    + +  D    D A+
Sbjct: 261 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 320

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM      PNV+T  +++   C+ G IE A  VF+ M   G  P + T+N LI+G+
Sbjct: 321 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 380

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A +  ++MEK   +PN+ T+N L+ G C+  K ++A  +   +    + P+ 
Sbjct: 381 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 440

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN L++G+ + G   M  +++  M   G++ D  T+ ALI GLCK G+ ++A  ++  
Sbjct: 441 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 500

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  +  +  T++ALI G C    ++    L+++M+ + C    H F   +    ++  
Sbjct: 501 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 560

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            + A  +L +M++  + P  +  + L  G    G+  L++K+  +M+  G  P  +    
Sbjct: 561 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 620

Query: 549 TINCAPENGEKESG 562
            IN    NG  E  
Sbjct: 621 IINGLCNNGRVEEA 634



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 2/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++   D    D   K+ D +  + + C  +   + +L        K   A   F +M  
Sbjct: 306 LIKAKCDIGMTDKAMKMLDEM--ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P I + N  ++       V  A      M +    PN+ T N +M   C++    +
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  + + +   G +P   TYN L+ G C +G L++A    N M   G++P+  TF  LI 
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK G+L +AN I   M    +S + VT+  LI+G+ ++G ++    L+E M+ N    
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
              T+N  +  L K+ K  +A  ++  + K  LVP+  T++ LI G C    +  + ++ 
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M ++GC PN + + ++++  C N   + A  +L  M    ++P+    + L       
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 663

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ + A ++   M   G  P
Sbjct: 664 GRLDRAFQIVSTMVKNGCQP 683



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 155/342 (45%), Gaps = 22/342 (6%)

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP   + N  +       ++++A   +  M    + P+ +T   ++   CKLG +E
Sbjct: 433 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 492

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL-SLAMKFKNLMEKNGIQPNVITFNTL 339
           +A  +  +M   G      T+  LI GHC  G    +   F+N++E N       TFN  
Sbjct: 493 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-NRCLTTAHTFNCF 551

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +    K  KL+EAN +  +M    + P+VVT+  LI G+ + G + +   + E M + G 
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             ++ TY  +I GLC  G+ ++A  ++  +    + PN  TY+ L+         +RAFQ
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 671

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFC------------QNEDFDRAA--------EVLLEM 499
           +  +M+++GC+PN HI+  L+S F                D D  +          L   
Sbjct: 672 IVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNE 731

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++KC  P   + + L  GL   G+   A +L + M   GL P
Sbjct: 732 IKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFP 773



 Score =  118 bits (296), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 131/301 (43%), Gaps = 21/301 (6%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            ++ M  NR     +T N  + A  K   +  A  +   M   G +PSV T+  LI GHC
Sbjct: 532 LFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHC 591

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G  +L++K    M++ G  PNV T+  +I G C  G++ EA  I   M +  VSPN  
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHF 651

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG--LCKEGKTKKAAYLVK 427
           TY  L+  + + G  +    +   M++NG + +   Y+AL+ G  L       +A     
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 711

Query: 428 DLDKNSL------------------VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           DLD  SL                  VP    Y+ L+ G C       A QL + M++ G 
Sbjct: 712 DLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 771

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+K I   ++  +C+   +D   E +  +L+    P       +  GL + G+ + A K
Sbjct: 772 FPDKAI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQK 830

Query: 530 L 530
           L
Sbjct: 831 L 831



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 42/325 (12%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R+S   Y+  ++  A   +G +  A  V++ M + GF+     Y T+++  C  G +  A
Sbjct: 156 RLSYPCYSTLLMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAA 213

Query: 318 MKF--KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTL 374
             F  K L    G+  +V T  +L+   C++  L EA R+F +M K  N  PN VTY+ L
Sbjct: 214 EMFCCKVLRLGFGLDTHVCT--SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSIL 271

Query: 375 INGYGQVGNSEMGASLYEEMLRNGI-------------KVDI------------------ 403
           I+G  + G  E    L +EM+  G              K DI                  
Sbjct: 272 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 331

Query: 404 ----LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
                TY  LI  LC+EGK ++A  + + + K+ L P   T++ALI G C       AFQ
Sbjct: 332 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 391

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M +  C+PN   +  LM   C+     +A  +L  +++  + PD +  + L  G  
Sbjct: 392 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 451

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G+  +A  +F  M   GL P GF
Sbjct: 452 KEGQLNMAFNIFNSMNSAGLEPDGF 476



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 117/263 (44%), Gaps = 20/263 (7%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++   F+          K   A     +M  YG +P + +    +     +    ++L
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M++   SPNVYT  ++++  C  G +E A  +  +M S G  P+  TY  L+  H
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 660

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS--EMKATNVSP 366
              G L  A +  + M KNG QPN   ++ L+ GF        A  + S  ++ A ++S 
Sbjct: 661 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 720

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
                N L N                E+ + G+  + L YN L++GLCKEG+  +A  L 
Sbjct: 721 EENDNNCLSN----------------EIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLT 763

Query: 427 KDLDKNSLVPNASTYSALITGQC 449
           +D+ K+ L P+ +  S++I   C
Sbjct: 764 QDMVKHGLFPDKAI-SSIIEHYC 785


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 175/350 (50%), Gaps = 16/350 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           KF  A      M   GF+P   + +K ++ L ++ +V+ A   ++EM+   + P+VYT  
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +++ +FCK+G+IE+A   F  MES+G  PSV TY  L+  +     +  A    + M   
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDA 554

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN----------------VSPNVVTY 371
           G  PN IT++ L+ G CK G+  +A  ++++M  T+                ++PNVVTY
Sbjct: 555 GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTY 614

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+G  +         L + M  NG + + + Y+ALI G CK GK   A  +   + K
Sbjct: 615 GALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSK 674

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              +P   TY++LI      +  + A ++   M+ S C PN   +  ++   C+  +  +
Sbjct: 675 CGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQK 734

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A ++L  M ++   P+ +  + L  GL   GK +++++LF +M  +G  P
Sbjct: 735 ALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAP 784



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 177/410 (43%), Gaps = 57/410 (13%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV---- 244
           C+ +P +F+ L  +Y + + +  A     +M   G  P     N F+ S+   E +    
Sbjct: 340 CNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPD 399

Query: 245 --DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
              +A   Y+EM  +    N           C +G  ++A ++ K M   GF+P  +TY+
Sbjct: 400 LLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYS 459

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I+  C    +  A      M+  G+ P+V T+  LI  FCK G + +A   F EM++ 
Sbjct: 460 KVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESV 519

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             SP+VVTY  L++ Y +       + ++  M+  G   + +TY+AL+ GLCK G+++KA
Sbjct: 520 GCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKA 579

Query: 423 ----AYLVKDLDK------------NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
               A ++   D             +S+ PN  TY ALI G C       A +L   M  
Sbjct: 580 CEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSS 639

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
           +GC PN  I++ L+  FC+    D A E                                
Sbjct: 640 NGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 699

Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              VL +MLE    P+ +  + +  GL   G+ + A+KL   ME RG  P
Sbjct: 700 AIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 150/320 (46%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  ++        A   F +M   G  P + +    L + L +++V  A   +  M 
Sbjct: 493 YTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMV 552

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM----ESMG------------FIPSVT 299
               +PN  T + ++   CK G  ++A EV+  M    +++G              P+V 
Sbjct: 553 DAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVV 612

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  LI G C    +  A +  ++M  NG +PN I ++ LI GFCK GKL  A  +F  M
Sbjct: 613 TYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRM 672

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P V TY +LI+   +    ++   +  +ML +    +++TY A+I GLC+ G+ 
Sbjct: 673 SKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGEC 732

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +KA  L+  ++K    PN  TY++LI G       + + QL+  MI  GC PN   + +L
Sbjct: 733 QKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVL 792

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           ++  C     D A  +L EM
Sbjct: 793 INHCCAAGLLDEAHSLLSEM 812



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 156/317 (49%), Gaps = 5/317 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + +++D L   +    K  NA + F +M   G+LP + +    + ++    R+D+A+
Sbjct: 642 CEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAI 701

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               +M  +  +PNV T   ++   C++G  ++A+++   ME  G  P+V TY +LI G 
Sbjct: 702 KVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGL 761

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G + ++++    M   G  PN +T+  LI   C  G L EA+ + SEMK T     V
Sbjct: 762 GKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYV 821

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             Y +++ G+ +   + +G  L EE+  +G+      Y  LI    K G+ +KA  L K+
Sbjct: 822 QGYCSVVQGFSKKFIASLG--LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKE 879

Query: 429 LDKNSL---VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           + + S    + +  TY++LI   C+    E+AF+LY  + R G  P    F  L+    +
Sbjct: 880 MMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIK 939

Query: 486 NEDFDRAAEVLLEMLEK 502
              ++ A ++   M ++
Sbjct: 940 VNKWNEALQLCYSMCDE 956



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/563 (21%), Positives = 216/563 (38%), Gaps = 98/563 (17%)

Query: 49  NPSVSENSMKMNRNPIPIPHRT-LPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPF 107
            P +S       + P P+ H   LP P+   +     AY+       ++           
Sbjct: 45  GPRLSSKDFAFLQVPTPVLHAAALPPPEAVLISKAIRAYASDFDGKAERFLRRHRDFLND 104

Query: 108 RVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL 167
            V   +L+  +   L + FF W +     S T   ++ +  +L  + + +++E +LR I 
Sbjct: 105 AVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIG 164

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           + D  ++  +L + I+   R C                   +  A +   +++D+G+ P 
Sbjct: 165 EDDR-EVLGRLLNVIV---RKC--------------CRHGAWAKALEELGRLKDFGYRPS 206

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-------IIE 280
             + N  +  L  + ++D+     KEM       + +T+     A CK G       +IE
Sbjct: 207 GATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIE 266

Query: 281 R-------------------------AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R                         A+     M     IP+V TY TL++G   K  L 
Sbjct: 267 REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLG 326

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +  ++M   G  PN   FN+L+  +C       A ++ + M      P  V YN  I
Sbjct: 327 WCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI 386

Query: 376 NGYGQVGNSE---------MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
              G + + E         +   +YEEML +   ++ +        LC  GK  KA  ++
Sbjct: 387 ---GSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQII 443

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC-- 484
           K + +   VP+ STYS +IT  C     E+AF L++ M   G  P+ + + +L+ +FC  
Sbjct: 444 KLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKV 503

Query: 485 ---------------------------------QNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                                            + +   +A+++   M++   AP++I  
Sbjct: 504 GLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITY 563

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
           S L  GL   G+ + A +++ KM
Sbjct: 564 SALVDGLCKAGESQKACEVYAKM 586



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 156/321 (48%), Gaps = 7/321 (2%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +  L  + +V  A      M  N   PN    + ++  FCK+G ++ A EV
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M   G++P+V TY +LI        L LA+K  + M ++   PNV+T+  +I G C+
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  +A ++ S M+    +PNVVTY +LI+G G+ G  +M   L+ +M+  G   + +T
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C  G   +A  L+ ++ +         Y +++ G    K    +  L + + 
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQG--FSKKFIASLGLLEELE 846

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH--CGK 523
             G      ++ +L+ +F +    ++A E+  EM+E   + + I   + Y+ L    C  
Sbjct: 847 SHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLN-ITSKDTYTSLIQALCLA 905

Query: 524 DEL--AMKLFRKMEIRGLLPK 542
            +L  A +L+ ++  +G++P+
Sbjct: 906 SQLEKAFELYSEITRKGVVPE 926


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 182/396 (45%), Gaps = 24/396 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G L    F    ++ + ++     C+ +P +F+ L   Y +   +  A   F +M 
Sbjct: 311 TLLSGFLKKKQFGWCKRIINMMMT--EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT 368

Query: 221 DYGFLPIIESCNKFLSSLL------DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
             G  P   + N F+ S+       ++E +D+    Y+EM       N           C
Sbjct: 369 TCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLC 428

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
            +G  E+A ++ K M   GF+P  +TY  +I+  C    +  +      M++ G+ P+V 
Sbjct: 429 GVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVY 488

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+  LI  FCK G + +A   F EM++   SPNVVTY  L++ Y +         ++  M
Sbjct: 489 TYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRM 548

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL----------------DKNSLVPNA 438
           +      + +TY+ALI GLCK G+ +KA  + + L                D  ++ PN 
Sbjct: 549 VDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNV 608

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY ALI G C  +    A +L  +M+ +GC PN+ +++ L+  FC+    D A EV L 
Sbjct: 609 VTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLR 668

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           M +    P     + L   +   G+ +LAMK+  +M
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 153/320 (47%), Gaps = 16/320 (5%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L  ++        A   F +MR  G  P + +    L + L S+++  A   +  M 
Sbjct: 490 YTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMV 549

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFK-------NMESMGFI---------PSVT 299
                PN  T + ++   CK G I++A EV++       N+ES  +          P+V 
Sbjct: 550 DAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVV 609

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  LI G C    +S A +  + M   G +PN I ++ LI GFCK GK+  A  +F  M
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P+V TY +LI+   + G  ++   +  EML +    +++TY A+I GL K G+ 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +KA  L+  +++    PN  TY+ALI G      ++ + +L+K M   GC PN   + +L
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789

Query: 480 MSTFCQNEDFDRAAEVLLEM 499
           ++  C     D A  +L EM
Sbjct: 790 INHCCAAGLLDEAHLLLDEM 809



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 185/432 (42%), Gaps = 52/432 (12%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-----VF 196
           T++ +LH   K+++   +  I   ++D+  +  P+ +  S L    +C +  +     V+
Sbjct: 524 TYTALLHAYLKSKQLIQAHDIFHRMVDAACY--PNAVTYSALID-GLCKAGEIQKACEVY 580

Query: 197 DLLFKTYAHRKK--FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           + L  T  + +   +    DT C +      P + +    +  L  +++V  A      M
Sbjct: 581 EKLIGTSGNVESDFYFEGNDT-CTIA-----PNVVTYGALIDGLCKAQKVSDAHELLDAM 634

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                 PN    + ++  FCK+G I+ A EVF  M   G++PSV TY +LI      G L
Sbjct: 635 LAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRL 694

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            LAMK  + M  +   PNV+T+  +I G  K G++ +A  + S M+    SPNVVTY  L
Sbjct: 695 DLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTAL 754

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA------------ 422
           I+G G+ G ++    L+++M   G   + +TY  LI   C  G   +A            
Sbjct: 755 IDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHW 814

Query: 423 -----AY----------------LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
                 Y                L+++++ +  VP A  Y  LI         E A +L+
Sbjct: 815 PKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELH 874

Query: 462 KSMIRSGCRPN---KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           K ++      N     ++  L+   C     + A  +  EM  K + PD I+   L  GL
Sbjct: 875 KELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGL 934

Query: 519 HHCGKDELAMKL 530
               K + A++L
Sbjct: 935 IEVNKWDEALQL 946



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 179/434 (41%), Gaps = 62/434 (14%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L + FF W +     S T   +  +  IL      +++E +LR I + D  ++  +L + 
Sbjct: 116 LCVRFFLWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIGEDDR-EVLRRLLNV 174

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++   R C    L              +  A +   +++D+G+ P   + N  +  L  +
Sbjct: 175 LV---RRCCRHGL--------------WDEALEELGRLKDFGYRPSAVTYNALVQVLASA 217

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            +V++     KEM  +    +  T+     A CK+G   R  +    +E   F       
Sbjct: 218 GQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVG---RWADALNMLEKEDFNLDTVLC 274

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             +ISG     L + AM F + M  N   PNV+T+ TL+ GF KK +     RI + M  
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMT 334

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE----- 416
              +PN   +N+L++GY   G+      L+  M   G     + YN  I  +C +     
Sbjct: 335 EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPN 394

Query: 417 ------------------------------------GKTKKAAYLVKDLDKNSLVPNAST 440
                                               GK +KA  ++K++ +   VP+ ST
Sbjct: 395 AELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTST 454

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ +IT  C  K  E++F L++ M R+G  P+ + + +L+ +FC+    ++A     EM 
Sbjct: 455 YTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMR 514

Query: 501 EKCMAPDSIILSEL 514
               +P+ +  + L
Sbjct: 515 SVGCSPNVVTYTAL 528


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 193/428 (45%), Gaps = 23/428 (5%)

Query: 117 QKDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSESILRGI-LDSDSFDL 174
           Q++  L+ + F +   + P  S T +T+  ++  L++ R F   ES+L  +  +S     
Sbjct: 25  QENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKC 84

Query: 175 PSKLFDSILYSYRMCDSSPL-------------------VFDLLFKTYAHRKKFRNATDT 215
              +F S++ +Y +     L                   + + L   +   K++     T
Sbjct: 85  GDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGST 144

Query: 216 FCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
               +D YG LP + S N  + +L     V+ AL  + EM    + PN+ T   ++  F 
Sbjct: 145 LKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFV 204

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
             G +  A +VF  +   G++P  TTY  L+ G+C +G LS A+K  + ME NG++PN +
Sbjct: 205 SRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEV 264

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+  +I  +CK+ K  EA  +  +M      P+      +I+   + G  E    L++ M
Sbjct: 265 TYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRM 324

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           L      D    + LI  LCKEGK  +A  L  + ++ + +P+  TY+ LI G C R   
Sbjct: 325 LEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGT-IPSLMTYNTLIAGMCERGEL 383

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
             A +L+  M+   CRPN   + ML+  F +         +L EML+    P+    + L
Sbjct: 384 NEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLL 443

Query: 515 YSGLHHCG 522
             GL   G
Sbjct: 444 IEGLQESG 451



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 128/275 (46%), Gaps = 2/275 (0%)

Query: 290 ESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           E     PSV   NTL++    NK    +    KN  +K G+ PNV +FN LI   CKK  
Sbjct: 114 EEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKND 173

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A ++F EM    + PN+VTY T++ G+   G+      ++ E+   G   D  TY  
Sbjct: 174 VENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTV 233

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L++G CK+G+   A  ++ +++ N + PN  TY  +I   C  K S  A  L   M+   
Sbjct: 234 LMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKK 293

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+  +   ++   C++   + A  +   MLEK   PD+ I+S L   L   GK   A 
Sbjct: 294 FLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEAR 353

Query: 529 KLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           KLF + E +G +P        I    E GE    G
Sbjct: 354 KLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAG 387



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 99/254 (38%), Gaps = 41/254 (16%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+ D++   Y   + + + + ++   Y   KK   A +    M D  FLP    C K + 
Sbjct: 249 KVMDNM--EYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVID 306

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L +  +V+ A   +K M      P+   ++ ++H  CK G +  A ++F   E  G IP
Sbjct: 307 VLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQ-GTIP 365

Query: 297 SVTTY-----------------------------------NTLISGHCNKGLLSLAMKFK 321
           S+ TY                                   N LI G    G++   ++  
Sbjct: 366 SLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRIL 425

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M  NG  PN  T+  LI G  + G   + +++ S M   +   +  +++  ++    V
Sbjct: 426 EEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMS-MAMASREVDADSWDLFLHKI--V 482

Query: 382 GNSEMGASLYEEML 395
           GN + G    + +L
Sbjct: 483 GNLDCGTGALDRLL 496


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 202/440 (45%), Gaps = 20/440 (4%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L  +S+ +  + +  VL + Q D  L    F W       S  L   ++           
Sbjct: 52  LKVISSRIRSYTITSVL-QEQPDTRLGFRLFIW----SLKSWHLRCRTV----------- 95

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
              + I+  ++  ++F+L  K+   +  S     S    F +L + Y+       A ++F
Sbjct: 96  --QDLIIGKLIKENAFELYWKVLQELKNSAIKISSE--AFSVLIEAYSEAGMDEKAVESF 151

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             MRD+   P + + N  L  L+  E   +AL  Y +M +  ++P+V T  +++H  CK 
Sbjct: 152 SLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKT 211

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
              + A+ +F  M   G +P+   Y+ ++SG C    +  A +  + M  +G   ++IT+
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N L+ GFCK G L +A  +   +        V+ Y  LING  +    E     Y++MLR
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             IK D++ Y  +I GL +EG+  +A  L+ ++ +  L P+   Y+ALI G C     + 
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L   + +  C PN H + +L+   C+N   ++A  +  EM +    P  +  + L +
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 517 GLHHCGKDELAMKLFRKMEI 536
           GL    + E A  LF +MEI
Sbjct: 452 GLCKANRLEEARLLFYQMEI 471



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 157/345 (45%), Gaps = 18/345 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ ++ +  +   +   A     +M + G  P     N  +    D   +D A     E
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG- 312
           + ++   PN +T ++++   CK G+I +A  +FK ME +G +PSV T+N+LI+G C    
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 313 -----LLSLAMK-------FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
                LL   M+       F  L +      ++ +   ++   C+ G + +A ++  ++ 
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
            + V P++ TYN LING+ + GN      L++EM   G   D +TY  LI GL + G+ +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  + + + K   VP +STY  ++T  C   N   A  ++   +R           ++ 
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVA 638

Query: 481 STFCQNEDFDRAAEVLLEMLEKC----MAPDSIILSELYSGLHHC 521
            +F  NE+   A   LLEM  K     +AP +I L  L      C
Sbjct: 639 ESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDC 682


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 171/335 (51%), Gaps = 16/335 (4%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S N  LS L   +        Y +MR + +S +  TLN++++  C +  +      
Sbjct: 67  PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  +   G+ P++ TYNTLI G C +  +S A +    M+K G  P+V+T+ TLI G C 
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186

Query: 346 KGKLHEANRIFSEM------KATNVSPNVVTYNTLINGYGQVGNSEMGASLYE------- 392
            G ++ A ++  EM         N  PNV+TYN +++G  +VG  +    L+E       
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246

Query: 393 ---EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
              EML  G++ D++T+N LI  LCKEGK  +A  L+  + ++ +VP+  TY++LI G C
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +  +   A +L+ SM   GC P+   + +L++ + +    + A ++  EML     P+ I
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               L  G+   GK + A KLF  M+  G+    +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 401



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 185/403 (45%), Gaps = 53/403 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L K      +   AT  F +M+  G  P + +    +  L  +  ++IAL  ++E
Sbjct: 140 VTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQE 199

Query: 254 MRRNRIS-------PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS--------- 297
           M  N IS       PNV T N+++   CK+G  + A ++F+ M++ G IP+         
Sbjct: 200 M-LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQP 258

Query: 298 -VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            + T+N LI   C +G +  A K   +M ++GI P+++T+N+LI GFC  G L+ A  +F
Sbjct: 259 DMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELF 318

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M +    P+V++YN LINGY +    E    LY EML  G + +++TY++L+ G+   
Sbjct: 319 VSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLA 378

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTY----------------------------------- 441
           GK   A  L   +  + +  N+ TY                                   
Sbjct: 379 GKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENL 438

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C     E A++L++ +   G  PN   + +++  FC+    D+A  ++ +M  
Sbjct: 439 NCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEA 498

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               PD I  + L  G +   K E  ++L  +M  + + P   
Sbjct: 499 NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 163/329 (49%), Gaps = 4/329 (1%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M D G  P + + N  + +L    +V  A      M  + I P++ T N ++  FC +G
Sbjct: 250 EMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVG 309

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A E+F +M S G  P V +YN LI+G+     +  AMK  N M   G +PNVIT++
Sbjct: 310 DLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD 369

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +L+ G    GK+ +A ++FS MKA  ++ N  TY   ++G  +         L+ E+  +
Sbjct: 370 SLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSS 429

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             K++I   N LI GLCK GK + A  L + L      PN  TY+ +I G C     ++A
Sbjct: 430 NFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 489

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L + M  +GC P+   +  LM  F ++   +   ++L  M +K ++PD+I  S +   
Sbjct: 490 NVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDM 549

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           L    K +  + L  +  I+    KG DK
Sbjct: 550 LSKDEKYQECLHLLPRFPIQ----KGVDK 574



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 138/281 (49%), Gaps = 8/281 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G       +   +LF S+    + C+   + +++L   Y+   K   A   + +M 
Sbjct: 300 SLIEGFCMVGDLNSARELFVSM--PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 357

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + +  L  +  + +VD A   +  M+ + I+ N YT  + +   CK   + 
Sbjct: 358 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 417

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++F  ++S  F   +   N LI G C  G L  A +    +   G +PNV+T+  +I
Sbjct: 418 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 477

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC++G++ +AN +  +M+A   +P+++TYNTL+ G+ +    E    L   M +  + 
Sbjct: 478 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 537

Query: 401 VDILTYNALILGLCKEGKTKKAAYLV------KDLDKNSLV 435
            D +T + ++  L K+ K ++  +L+      K +DK+ L+
Sbjct: 538 PDAITCSIVVDMLSKDEKYQECLHLLPRFPIQKGVDKHLLM 578



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 139/335 (41%), Gaps = 55/335 (16%)

Query: 260 SPNVYTLNMVMHAFCKLGIIE--RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           SPN      + H  CK G +    A+  F  M      PS++++N L+SG       S  
Sbjct: 31  SPNPQIAFFLRH--CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               N M  +G+  +  T N L+   C   +L E    F+ +     SPN+VTYNTLI G
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 378 ----------------------------YGQV-------GNSEMGASLYEEMLRN----- 397
                                       YG +       GN  +   L++EML +     
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 398 -GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA----------STYSALIT 446
              K +++TYN ++ GLCK G+  +A  L +++    ++PN            T++ LI 
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLID 268

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C       A +L   MI SG  P+   +  L+  FC   D + A E+ + M  K   P
Sbjct: 269 TLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEP 328

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D I  + L +G     K E AMKL+ +M + G  P
Sbjct: 329 DVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 363



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 27/288 (9%)

Query: 295 IPSVTTYNTLISGHCNKGLLSL--AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           IPS          HC  G ++   A+ F +LM ++   P++ +FN L+ G  K     + 
Sbjct: 29  IPSPNPQIAFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQV 88

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             ++++M+ + +S +  T N L+N    V     G + +  +LR G   +I+TYN LI G
Sbjct: 89  FSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKG 148

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS----- 467
           LC E +  +A  L   + K    P+  TY  LI G C   N   A +L++ M+       
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208

Query: 468 -GCRPNKHIFEMLMSTFCQNEDFDRAAEVLL----------EMLEKCMAPDSIILSELYS 516
             C+PN   + +++   C+    D A ++            EML++ + PD +  + L  
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLID 268

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
            L   GK   A KL   M   G++P         +GF  +  +N A E
Sbjct: 269 TLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 184/401 (45%), Gaps = 3/401 (0%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVF 196
           L L   + +L  L   R   S  ++L  +      D    L  ++ L  +  C  + + +
Sbjct: 59  LPLGEATSLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSY 118

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
            +L +     +    A      MR  G    + +    +  L D+  VD A+    EM  
Sbjct: 119 TVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCE 178

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           + I PNV   + ++  +CK G  E   +VF  M   G  P V  Y  LI   C  G    
Sbjct: 179 SGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKK 238

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A    ++M + G++PNV+T+N LI   CK+G + EA  +  +M    V+P+VVTYNTLI 
Sbjct: 239 AHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIK 298

Query: 377 GYGQVGNSEMGASLYEEMLR--NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           G   V   +    L EEM+R  N +K +++T+N++I GLC  G+ ++A  +   +++   
Sbjct: 299 GLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGC 358

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           + N  TY+ LI G        +A +L   M   G  P+   + +L+  FC+    DRA +
Sbjct: 359 MVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAED 418

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +L  M ++ + P+      L   +   G  E A  LF +M+
Sbjct: 419 LLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 13/387 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D+   D   +L         MC+S      +V+  L + Y    ++ +    F
Sbjct: 155 TLIRGLCDAAEVDKAVELMG------EMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVF 208

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M + G  P +      + SL    +   A G    M R  + PNV T N++++  CK 
Sbjct: 209 VEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKE 268

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM--EKNGIQPNVI 334
           G ++ A+ V K M   G  P V TYNTLI G  +   +  AM     M   KN ++PNV+
Sbjct: 269 GSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVV 328

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN++I G C  G++ +A ++ + M+ T    N+VTYN LI G  +V        L +EM
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
              G++ D  TY+ LI G CK  +  +A  L+  +    + P    Y  L+   C +   
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           ERA  L+  M  +    +   +  ++   C+  D   A E+L  ++++ + PD++  S +
Sbjct: 449 ERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIV 507

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +     G  E A  + ++M   G LP
Sbjct: 508 INMFAKSGDMEAANGVLKQMTASGFLP 534



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 148/286 (51%), Gaps = 2/286 (0%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN  +  ++M A C   + ++AV + ++M S G    V TY TLI G C+   +  A++ 
Sbjct: 113 PNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVEL 172

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M ++GI+PNV+ +++L+ G+CK G+  +  ++F EM    + P+VV Y  LI+   +
Sbjct: 173 MGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCK 232

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           VG ++    + + M+R G++ +++TYN LI  +CKEG  K+A  ++K + +  + P+  T
Sbjct: 233 VGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVT 292

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           Y+ LI G       + A  L + M+R     +PN   F  ++   C      +A +V   
Sbjct: 293 YNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAM 352

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           M E     + +  + L  GL    K   AM+L  +M   GL P  F
Sbjct: 353 MEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSF 398



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 160/327 (48%), Gaps = 3/327 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L          + A     +M + G  P + + N  +  L D   +D A+   +E
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 254 MRR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           M R  N + PNV T N V+   C +G + +A +V   ME  G + ++ TYN LI G    
Sbjct: 316 MVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRV 375

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +  AM+  + M   G++P+  T++ LI GFCK  ++  A  + S M+   + P +  Y
Sbjct: 376 HKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHY 435

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L+    + G  E   +L+ EM  N   +D++ Y+ +I G CK G  K A  L+K +  
Sbjct: 436 IPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVD 494

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L P+A TYS +I       + E A  + K M  SG  P+  +F+ L+  +    + ++
Sbjct: 495 EGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINK 554

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGL 518
             E++ EM+ K +A DS I+S L + L
Sbjct: 555 VLELIREMITKNIALDSKIISTLSTSL 581



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 97/214 (45%), Gaps = 1/214 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++LL        K R A +   +M   G  P   + +  +       +VD A 
Sbjct: 358 CMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAE 417

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                MR   I P ++    ++ A C+ G++ERA  +F  M++  F   V  Y+T+I G 
Sbjct: 418 DLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGA 476

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A +    +   G+ P+ +T++ +I  F K G +  AN +  +M A+   P+V
Sbjct: 477 CKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDV 536

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             +++LI GY   G       L  EM+   I +D
Sbjct: 537 AVFDSLIQGYSTKGEINKVLELIREMITKNIALD 570



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 4/202 (1%)

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRN---GIKVDILTYNALILGLCKEGKTKKAA 423
           + V+YNT++    + G+ +   +L   M        + + ++Y  L+  LC +    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++ +    +  +  TY  LI G C     ++A +L   M  SG  PN  ++  L+  +
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C++  ++   +V +EM EK + PD ++ + L   L   GK + A  +   M  RGL P  
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 544 FDKLRTINCAPENGE-KESGGL 564
                 INC  + G  KE+ G+
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGV 277


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 173/341 (50%), Gaps = 11/341 (3%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS-PNVYTLNMVM 270
           + D F +M      P I+  N     +  S+    A+   K +        +V TLN+++
Sbjct: 60  SVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLNILI 119

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL------ISGHCNKGLLSLAMKFKNLM 324
           +  C+L        V   M  +G  P++ T NT+      ++G C  G  S A++    M
Sbjct: 120 NCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKM 179

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY-GQVGN 383
            K  ++PNV+ +N ++ G CK+G + EA  +F EM   NV PNVVTYN LI G  G+VG 
Sbjct: 180 VKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGG 239

Query: 384 SEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
              G  L+ EM+   GI  D+ T++ L+ G CKEG   +A  +V  + +  +  N  TY+
Sbjct: 240 WREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYN 299

Query: 443 ALITGQCVRKNSERAFQLYKSMIR--SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           +LI+G C+R   E A +++  M+R   GC P+   +  L+  +C+ +  ++A  +L EM+
Sbjct: 300 SLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMV 359

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            K + PD    + L  G    GK   A +LF  M+ +G +P
Sbjct: 360 GKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVP 400



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 164/335 (48%), Gaps = 4/335 (1%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
            A ++  +M      P +   N  L  L     V  ALG + EM    + PNV T N ++
Sbjct: 171 GALESLKKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLI 230

Query: 271 HAFC-KLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
              C ++G     V +F  M +  G +P V T++ L++G C +GLL  A      M + G
Sbjct: 231 QGLCGEVGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIG 290

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEM--KATNVSPNVVTYNTLINGYGQVGNSEM 386
           ++ NV+T+N+LI G+C + ++ EA R+F  M  +     P+VVTYN+LI+G+ +V     
Sbjct: 291 VELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNK 350

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             SL  EM+  G+  D+ T+ +LI G  + GK   A  L   +     VP   T + ++ 
Sbjct: 351 AMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLD 410

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G         A  L+++M +SG   +  I+ +++   C+    + A ++L  +L K +  
Sbjct: 411 GLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKI 470

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           DS   + +  GL   G  + A +L RKM+  G  P
Sbjct: 471 DSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPP 505



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 152/301 (50%), Gaps = 40/301 (13%)

Query: 247 ALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            +G + EM   + I P+V T +++++ FCK G++ RA  +   M  +G   +V TYN+LI
Sbjct: 243 GVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLI 302

Query: 306 SGHCNKGLLSLAMKFKNLM--EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           SG+C +  +  A++  +LM  E  G  P+V+T+N+LI G+CK  K+++A  + SEM    
Sbjct: 303 SGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKG 362

Query: 364 VSPNVVTYNTLINGYGQVG------------------------------------NSEMG 387
           + P+V T+ +LI G+ +VG                                    +SE  
Sbjct: 363 LDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSE-A 421

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            +L+  M ++G+ +DI+ YN ++ G+CK GK   A  L+  +    L  ++ T++ +I G
Sbjct: 422 MTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKG 481

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A +L + M  +GC PNK  + + +    +  D  R+ + L  M +K    D
Sbjct: 482 LCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVD 541

Query: 508 S 508
           +
Sbjct: 542 A 542



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 146/332 (43%), Gaps = 45/332 (13%)

Query: 209 FRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSE---RVDIALGFYKEMRRNRISPNVY 264
           +R     F +M  + G +P +++ +  ++         R +  +GF   M R  +  NV 
Sbjct: 240 WREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGF---MIRIGVELNVV 296

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNM--ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           T N ++  +C    +E AV VF  M  E  G +PSV TYN+LI G C    ++ AM   +
Sbjct: 297 TYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLS 356

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP---------------- 366
            M   G+ P+V T+ +LI GF + GK   A  +F  MK     P                
Sbjct: 357 EMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCW 416

Query: 367 -------------------NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
                              ++V YN +++G  ++G       L   +L  G+K+D  T+N
Sbjct: 417 LDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWN 476

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I GLC+EG    A  L++ + +N   PN  +Y+  + G   + +  R+ +  + M   
Sbjct: 477 IMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDK 536

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           G   +    E+L+     NE+ D A +  L++
Sbjct: 537 GFPVDATTAELLIRFLSANEE-DNAFQEFLQI 567



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 117/254 (46%), Gaps = 2/254 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + ++ L   Y  R +   A   F  M     G LP + + N  +      ++V+ A+   
Sbjct: 296 VTYNSLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLL 355

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + P+V+T   ++  F ++G    A E+F  M+  G +P + T   ++ G    
Sbjct: 356 SEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKC 415

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
            L S AM     MEK+G+  +++ +N ++ G CK GKL++A ++ S +    +  +  T+
Sbjct: 416 WLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTW 475

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I G  + G  +    L  +M  NG   +  +YN  + GL ++    ++   ++ +  
Sbjct: 476 NIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKD 535

Query: 432 NSLVPNASTYSALI 445
                +A+T   LI
Sbjct: 536 KGFPVDATTAELLI 549



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/250 (22%), Positives = 103/250 (41%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +  +   ++FD ++     C  S + ++ L   +   KK   A     +M 
Sbjct: 300 SLISGYCLRNRMEEAVRVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMV 359

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    +    +  +   A   +  M+     P + T  +V+    K  +  
Sbjct: 360 GKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDS 419

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +F+ ME  G    +  YN ++ G C  G L+ A K  + +   G++ +  T+N +I
Sbjct: 420 EAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMI 479

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++G L +A  +  +MK     PN  +YN  + G  +  +        + M   G  
Sbjct: 480 KGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFP 539

Query: 401 VDILTYNALI 410
           VD  T   LI
Sbjct: 540 VDATTAELLI 549


>gi|270342070|gb|ACZ74655.1| hypothetical protein [Phaseolus vulgaris]
 gi|270342076|gb|ACZ74661.1| hypothetical protein [Phaseolus vulgaris]
          Length = 485

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 180/390 (46%), Gaps = 35/390 (8%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           ++++++     C+ +P++FD+L K Y        A +TF +  +   +P + +CN  LS 
Sbjct: 24  IYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIETRLIPNVIACNCLLSG 83

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L     +      Y EM R  +  N YT N++ H   K G  ++     + ME  GF P 
Sbjct: 84  LSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEPD 143

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TYNTL++ +C K  L  A     +M   G+ PN+IT+ TL+ G C++GK+ EA+++F 
Sbjct: 144 LVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLFH 203

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT------------ 405
           +M    ++P++V+YNTL+ GY + G  +M  S+  EM+ N I  D +T            
Sbjct: 204 QMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARDG 263

Query: 406 -----------------------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                                  Y+ L++ LCKEGK   A   +  + ++   P  +TY+
Sbjct: 264 KLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYN 323

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L+   C   N E A  L   M     + N   +  ++   C+ +    A  +L E++  
Sbjct: 324 KLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGS 383

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFR 532
            M PD  I   L  G     K + A+ L +
Sbjct: 384 DMLPDVEISRALIKGYCEENKVDKAVSLLK 413



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/337 (22%), Positives = 140/337 (41%), Gaps = 35/337 (10%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + GF P + + N  ++S     R++ A   YK M    + PN+ T   +M+  C+ G
Sbjct: 134 KMEEEGFEPDLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEG 193

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT-- 335
            ++ A ++F  M   G  P + +YNTL+ G+C  G + +       M  N I P+ IT  
Sbjct: 194 KVKEAHQLFHQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCR 253

Query: 336 ---------------------------------FNTLIFGFCKKGKLHEANRIFSEMKAT 362
                                            ++ L+   CK+GK   A      +   
Sbjct: 254 VIVDGYARDGKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISED 313

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +P + TYN L+    +  N E    L  +M    +KV+   Y A+I+ LC+  +T +A
Sbjct: 314 GYTPKMNTYNKLVESLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEA 373

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L++++  + ++P+     ALI G C     ++A  L K   +     +   +  ++  
Sbjct: 374 EVLLEEIIGSDMLPDVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKV 433

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           FC   +     EV  ++L+    P+ +    +  GL 
Sbjct: 434 FCDVGNVTELMEVEDKLLKVGYVPNKLTCRHVIHGLQ 470



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 4/315 (1%)

Query: 249 GFYKEMRR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           G Y+ + R     + N    +M++ A+ K+G++E+A+E F+       IP+V   N L+S
Sbjct: 23  GIYENLVRCTEDCNWNPVIFDMLVKAYVKVGMVEKALETFRRNIETRLIPNVIACNCLLS 82

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G      ++   +    M + G+Q N  TFN +     K G   +      +M+     P
Sbjct: 83  GLSRFNYITQCWEVYAEMGRLGVQRNAYTFNIMTHVLSKDGDTDKVTGFLEKMEEEGFEP 142

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VTYNTL+N Y +    E    LY+ M   G+  +++TY  L+ GLC+EGK K+A  L 
Sbjct: 143 DLVTYNTLVNSYCKKRRLEDAFYLYKIMYVRGVMPNLITYTTLMNGLCEEGKVKEAHQLF 202

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + P+  +Y+ L+ G C     +    +   MI +   P+     +++  + ++
Sbjct: 203 HQMVHRGIAPDIVSYNTLVCGYCRHGEMQMCRSILYEMIGNRICPDSITCRVIVDGYARD 262

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GF 544
                A   + E+    M     +   L   L   GK   A     ++   G  PK   +
Sbjct: 263 GKLLSALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTY 322

Query: 545 DKLRTINCAPENGEK 559
           +KL    C   N E+
Sbjct: 323 NKLVESLCEFNNEEE 337



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 78/204 (38%), Gaps = 35/204 (17%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   +E++R R+       + ++ A CK G    A      +   G+ P + TYN L+ 
Sbjct: 268 ALNTVEELKRFRMKIPEEVYDYLVVALCKEGKPFAARSFLHRISEDGYTPKMNTYNKLVE 327

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C       A+  K+ ME   ++ N   +  +I   C+  +  EA  +  E+  +++ P
Sbjct: 328 SLCEFNNEEEALILKSDMENKSMKVNAAAYRAVIICLCRVKRTVEAEVLLEEIIGSDMLP 387

Query: 367 NVV-----------------------------------TYNTLINGYGQVGNSEMGASLY 391
           +V                                    +YN ++  +  VGN      + 
Sbjct: 388 DVEISRALIKGYCEENKVDKAVSLLKLFAKEFQVYDTESYNAVVKVFCDVGNVTELMEVE 447

Query: 392 EEMLRNGIKVDILTYNALILGLCK 415
           +++L+ G   + LT   +I GL K
Sbjct: 448 DKLLKVGYVPNKLTCRHVIHGLQK 471


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 178/369 (48%), Gaps = 19/369 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L  + A  K          QM  +G  P I + +  ++S     RV  A    
Sbjct: 60  STVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVL 119

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            ++ +    P+  T   ++   C  G I  A+ +F  M   GF P V TY TLI+G C  
Sbjct: 120 AKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  S A++    M +   QPNV  +NT+I   CK  ++ EA  +FSEM    +SP++ TY
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+    +   +  A+L  EM+ + I  D++++N ++  LCKEGK  +A  +V  + +
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE---- 487
             + PN  TY+AL+ G C+    + A +++ +M+  GC PN   +  L++ +C+ +    
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359

Query: 488 ---------------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
                          + D A +V   M+ K   P+ I  + L +G     + + AM LF 
Sbjct: 360 AIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFG 419

Query: 533 KMEIRGLLP 541
           +M  + L+P
Sbjct: 420 EMCRQELIP 428



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 171/374 (45%), Gaps = 19/374 (5%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   ++ +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 197 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 256

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM  ++I P+V + N V+ A CK G +  A +V   M   G  P+V TY  L+ GH
Sbjct: 257 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGH 316

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK-------------------L 349
           C    +  A+K  + M   G  PNVI++NTLI G+CK  +                   +
Sbjct: 317 CLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNM 376

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA ++F  M      PNV++YNTLINGY ++   +    L+ EM R  +  D +TY+ L
Sbjct: 377 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 436

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I GLC   + + A  L  ++   S +PN  TY  L+   C  +    A  L K++  S  
Sbjct: 437 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 496

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+  +  + +   C+  + + A ++   +  K + PD    S + +GL   G  + A K
Sbjct: 497 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 556

Query: 530 LFRKMEIRGLLPKG 543
           LFR+M+  G    G
Sbjct: 557 LFREMDENGCTLNG 570



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 177/397 (44%), Gaps = 56/397 (14%)

Query: 192 SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP +F  + L     +  ++++      +M D   +P + S N  + +L    +V  A  
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHD 292

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M +  + PNV T   +M   C L  ++ AV+VF  M   G +P+V +YNTLI+G+C
Sbjct: 293 VVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYC 352

Query: 310 NKGLLSLAMKFKNLMEK-------------------NGIQPNVITFNTLIFGFCKKGKLH 350
               +  A+ +  LM+                     G  PNVI++NTLI G+CK  ++ 
Sbjct: 353 KIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 412

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR-------------- 396
           +A  +F EM    + P+ VTY+TLI+G   V   +   +L+ EM+               
Sbjct: 413 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 472

Query: 397 ---------------------NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                                + +  DI   N  I G+C+ G+ + A  L  +L    L 
Sbjct: 473 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TYS +I G C R   + A +L++ M  +GC  N  I+  +   F +N +  RA ++
Sbjct: 533 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 592

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           L EM+ +  + D+  ++     L   G D+   ++ R
Sbjct: 593 LQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 4/312 (1%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N+F S  L    +D A+  +  M R +  P+    N ++ +  K+      + +   M+S
Sbjct: 30  NRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ T + LI+  C+   +  A      + K G QP+  TF TLI G C +GK+ E
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F +M      P+VVTY TLING  +VGN+     L   M++   + ++  YN +I 
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LCK+ +  +A  L  ++    + P+  TY++LI   C     +    L   M+ S   P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMK 529
           +   F  ++   C+      A +V+ +M+++ + P+ +  + L  G  HC   E+  A+K
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDG--HCLLSEMDEAVK 327

Query: 530 LFRKMEIRGLLP 541
           +F  M  +G +P
Sbjct: 328 VFDTMVCKGCMP 339



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 128/260 (49%), Gaps = 6/260 (2%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M   G +P + S N  ++     +R+D A+  + EM R  + P+  T + ++H
Sbjct: 379 AVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIH 438

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C +  ++ A+ +F  M +   IP++ TY  L+   C    L+ AM     +E + + P
Sbjct: 439 GLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDP 498

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           ++   N  I G C+ G+L  A  +FS + +  + P+V TY+ +ING  + G  +  + L+
Sbjct: 499 DIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLF 558

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM  NG  ++   YN +  G  +  +T +A  L++++       +AST +       V+
Sbjct: 559 REMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF-----VK 613

Query: 452 KNSERAF-QLYKSMIRSGCR 470
             S+    Q  K ++R+GC+
Sbjct: 614 MLSDDGLDQSLKQILRNGCK 633



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 118/259 (45%), Gaps = 4/259 (1%)

Query: 171 SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           + D   K+FD+++   + C  + + ++ L   Y   ++   A   F +M     +P   +
Sbjct: 375 NMDEAVKVFDTMVC--KGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 432

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            +  +  L   ER+  A+  + EM      PN+ T  +++   CK   +  A+ + K +E
Sbjct: 433 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 492

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                P +   N  I G C  G L  A   F NL  K G+QP+V T++ +I G C++G L
Sbjct: 493 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK-GLQPDVWTYSIMINGLCRRGLL 551

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA+++F EM     + N   YNT+  G+ +   +     L +EM+  G   D  T    
Sbjct: 552 DEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLF 611

Query: 410 ILGLCKEGKTKKAAYLVKD 428
           +  L  +G  +    ++++
Sbjct: 612 VKMLSDDGLDQSLKQILRN 630



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/189 (24%), Positives = 82/189 (43%)

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           F+ M      P+ V +N L+    ++ +     SL  +M   GI  +I T + LI   C 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
             +   A  ++  + K    P+ +T++ LI G CV      A  L+  MI  G RP+   
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVT 168

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L++  C+  +   A  +L  M++K   P+    + +   L    +   A  LF +M 
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 228

Query: 536 IRGLLPKGF 544
            +G+ P  F
Sbjct: 229 TKGISPDIF 237


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 170/362 (46%), Gaps = 35/362 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M +YGF P   +    L+ L  S    +AL  +++M    I  +V   ++V+ + CK G
Sbjct: 229 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 288

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG------------------------- 312
             + A+ +F  ME  G    V TY++LI G CN G                         
Sbjct: 289 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 348

Query: 313 -LLSLAMKFKNLMEKN---------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            L+ + +K   L+E           GI P+ IT+N+LI GFCK+  LHEAN++F  M + 
Sbjct: 349 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 408

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P++VTY+ LIN Y +    + G  L+ E+   G+  + +TYN L+LG C+ GK   A
Sbjct: 409 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 468

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L +++    + P+  TY  L+ G C      +A ++++ M +S       I+ +++  
Sbjct: 469 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 528

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C     D A  +   + +K + PD +  + +  GL   G    A  LFRKM+  G  P 
Sbjct: 529 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588

Query: 543 GF 544
            F
Sbjct: 589 DF 590



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++   Y  +KK   A     +    G+ P   + +  ++      RV  A+     M   
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           +  P++ T++ +++  C  G +  A+ +   M   GF P   TY  +++  C  G  +LA
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +     ME+  I+ +V+ ++ +I   CK G   +A  +F+EM+   +  +VVTY++LI G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
               G  + GA +  EM+   I  D++T++ALI    KEGK  +A  L  ++    + P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++LI G C       A Q++  M+  GC P+   + +L++++C+ +  D    +  
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           E+  K + P++I  + L  G    GK   A +LF++M  RG+ P        ++   +NG
Sbjct: 439 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 498

Query: 558 E 558
           E
Sbjct: 499 E 499



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 35/369 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A D F  M     LP     N+  S++  +++ D+ LGF K M  N I  ++YT+ 
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ +C+   +  A  V      +G+ P   T++TL++G C +G +S A+   + M + 
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEA-----------------------NR---------- 354
             +P+++T +TLI G C KG++ EA                       NR          
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258

Query: 355 --IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M+  N+  +VV Y+ +I+   + G+ +   SL+ EM   GIK D++TY++LI G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC +GK    A +++++   +++P+  T+SALI           A +LY  MI  G  P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  FC+      A ++   M+ K   PD +  S L +      + +  M+LFR
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 438

Query: 533 KMEIRGLLP 541
           ++  +GL+P
Sbjct: 439 EISSKGLIP 447



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    +   A     +M +    P + + +  ++ L    RV  AL     
Sbjct: 170 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 229

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+  T   V++  CK G    A+++F+ ME      SV  Y+ +I   C  G 
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 289

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+   N ME  GI+ +V+T+++LI G C  GK  +  ++  EM   N+ P+VVT++ 
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 349

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       LY EM+  GI  D +TYN+LI G CKE    +A  +   +    
Sbjct: 350 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 409

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TYS LI   C  K  +   +L++ +   G  PN   +  L+  FCQ+   + A 
Sbjct: 410 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 469

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + P  +    L  GL   G+   A+++F KM+
Sbjct: 470 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 168/350 (48%), Gaps = 4/350 (1%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S + + ++  +      F +A   F +M   G    + + +  +  L +  + D     
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            +EM    I P+V T + ++  F K G +  A E++  M + G  P   TYN+LI G C 
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +  L  A +  +LM   G +P+++T++ LI  +CK  ++ +  R+F E+ +  + PN +T
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 451

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTL+ G+ Q G       L++EM+  G+   ++TY  L+ GLC  G+  KA  + + + 
Sbjct: 452 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 511

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K+ +      Y+ +I G C     + A+ L+ S+   G +P+   + +++   C+     
Sbjct: 512 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 571

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
            A  +  +M E    PD    + L     H G   L  +++L  +M++ G
Sbjct: 572 EADMLFRKMKEDGCTPDDFTYNILIRA--HLGGSGLISSVELIEEMKVCG 619



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +     +++FD  L   + C+   + + +L  +Y   K+  +    F ++ 
Sbjct: 384 SLIDGFCKENCLHEANQMFD--LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 441

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +     S +++ A   ++EM    + P+V T  +++   C  G + 
Sbjct: 442 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 501

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+ M+       +  YN +I G CN   +  A      +   G++P+V+T+N +I
Sbjct: 502 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 561

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
            G CKKG L EA+ +F +MK    +P+  TYN LI  +  +G S + +S  L EEM   G
Sbjct: 562 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH--LGGSGLISSVELIEEMKVCG 619

Query: 399 IKVDILTYNALI 410
              D  T   +I
Sbjct: 620 FSADSSTIKMVI 631



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 86/183 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    K   A + F +M   G  P + +    L  L D+  ++ AL  +++
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 509

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+++R++  +   N+++H  C    ++ A  +F ++   G  P V TYN +I G C KG 
Sbjct: 510 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 569

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A      M+++G  P+  T+N LI        L  +  +  EMK    S +  T   
Sbjct: 570 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 629

Query: 374 LIN 376
           +I+
Sbjct: 630 VID 632


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 219/493 (44%), Gaps = 47/493 (9%)

Query: 87  SHLIHS-DW---KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLET 142
           S+LI+  +W   K L +L++H+TP     ++     +  L + FF WV         L+ 
Sbjct: 23  SNLINKPNWEHDKTLKSLASHMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCYDLDG 82

Query: 143 HSIVLHILTKNRKFKSSESI-----------------LRGILDSD-------SFDLPSKL 178
              +L +L     F  ++                   L G LD         S+   S L
Sbjct: 83  RIQLLGVLVSRDLFGVAQKAVVLLIQECEDSENGVVKLMGALDGMTELGFRLSYPCYSTL 142

Query: 179 ----------FDSILYSYRMCDSSPLVFDLLFKTYAH---RKKFRNATDTFC-QMRDYGF 224
                     F + L   RM +   ++  + ++T  +   +  F  A + FC ++   GF
Sbjct: 143 LMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGF 202

Query: 225 LPIIESCNKFLSSLLDSERVDIALGF--YKEM-RRNRISPNVYTLNMVMHAFCKLGIIER 281
                 C   +  L +  R D+   F  +++M +     PN  T ++++H  C+ G +E 
Sbjct: 203 GLDTHVCTSLV--LANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEE 260

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A ++ + M   G  PS  TY  LI   C+ G+   AMK  + M      PNV T+  LI 
Sbjct: 261 AFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILID 320

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C++GK+ EAN +F +M    + P ++T+N LINGY + G       L   M +   K 
Sbjct: 321 RLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKP 380

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +I TYN L+ GLC+  K+ KA  L++ +  N L+P+  TY+ L+ G C       AF ++
Sbjct: 381 NIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIF 440

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM  +G  P+   F  L+   C+    ++A  +L  M++K ++ D +  + L  G    
Sbjct: 441 NSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKI 500

Query: 522 GKDELAMKLFRKM 534
           GK +    LF  M
Sbjct: 501 GKAKDVCFLFENM 513



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 178/374 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + +L        +   A     +M + G  P   +    + +  D    D A+
Sbjct: 238 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 297

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM      PNV+T  +++   C+ G IE A  VF+ M   G  P + T+N LI+G+
Sbjct: 298 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 357

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A +  ++MEK   +PN+ T+N L+ G C+  K ++A  +   +    + P+ 
Sbjct: 358 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 417

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN L++G+ + G   M  +++  M   G++ D  T+ ALI GLCK G+ ++A  ++  
Sbjct: 418 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 477

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  +  +  T++ALI G C    ++    L+++M+ + C    H F   +    ++  
Sbjct: 478 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 537

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            + A  +L +M++  + P  +  + L  G    G+  L++K+  +M+  G  P  +    
Sbjct: 538 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 597

Query: 549 TINCAPENGEKESG 562
            IN    NG  E  
Sbjct: 598 IINGLCNNGRVEEA 611



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 2/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++   D    D   K+ D +  + + C  +   + +L        K   A   F +M  
Sbjct: 283 LIKAKCDIGMTDKAMKMLDEM--ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P I + N  ++       V  A      M +    PN+ T N +M   C++    +
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  + + +   G +P   TYN L+ G C +G L++A    N M   G++P+  TF  LI 
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK G+L +AN I   M    +S + VT+  LI+G+ ++G ++    L+E M+ N    
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
              T+N  +  L K+ K  +A  ++  + K  LVP+  T++ LI G C    +  + ++ 
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M ++GC PN + + ++++  C N   + A  +L  M    ++P+    + L       
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 640

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ + A ++   M   G  P
Sbjct: 641 GRLDRAFQIVSTMVKNGCQP 660



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP   + N  +       ++++A   +  M    + P+ +T   ++   CKLG +E
Sbjct: 410 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 469

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL-SLAMKFKNLMEKNGIQPNVITFNTL 339
           +A  +  +M   G      T+  LI GHC  G    +   F+N++E N       TFN  
Sbjct: 470 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-NRCLTTAHTFNCF 528

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +    K  KL+EAN +  +M    + P+VVT+  LI G+ + G + +   + E M + G 
Sbjct: 529 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 588

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             ++ TY  +I GLC  G+ ++A  ++  +    + PN  TY+ L+         +RAFQ
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 648

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTF 483
           +  +M+++GC+PN HI+  L+S F
Sbjct: 649 IVSTMVKNGCQPNSHIYSALLSGF 672



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 42/325 (12%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R+S   Y+  ++  A   +G +  A  V++ M + GF+     Y T+++  C  G +  A
Sbjct: 133 RLSYPCYSTLLMCLAKLNMGFV--AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAA 190

Query: 318 MKF--KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTL 374
             F  K L    G+  +V T  +L+   C++  L EA R+F +M K  N  PN VTY+ L
Sbjct: 191 EMFCCKVLRLGFGLDTHVCT--SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSIL 248

Query: 375 INGYGQVGNSEMGASLYEEMLRNGI-------------KVDI------------------ 403
           I+G  + G  E    L +EM+  G              K DI                  
Sbjct: 249 IHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKAC 308

Query: 404 ----LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
                TY  LI  LC+EGK ++A  + + + K+ L P   T++ALI G C       AFQ
Sbjct: 309 VPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 368

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M +  C+PN   +  LM   C+     +A  +L  +++  + PD +  + L  G  
Sbjct: 369 LLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFC 428

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G+  +A  +F  M   GL P GF
Sbjct: 429 KEGQLNMAFNIFNSMNSAGLEPDGF 453



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 4/263 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++   F+          K   A     +M  YG +P + +    +     +    ++L
Sbjct: 518 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 577

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M++   SPNVYT  ++++  C  G +E A  +  +M S G  P+  TY  L+  H
Sbjct: 578 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 637

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS--EMKATNVSP 366
              G L  A +  + M KNG QPN   ++ L+ GF        A  + S  ++ A ++S 
Sbjct: 638 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 697

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
                N L +   ++ + +    + +E+ + G+  + L YN L++GLCKEG+  +A  L 
Sbjct: 698 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLT 756

Query: 427 KDLDKNSLVPNASTYSALITGQC 449
           +D+ K+ L P+ +  S++I   C
Sbjct: 757 QDMVKHGLFPDKAI-SSIIEHYC 778


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 177/373 (47%), Gaps = 10/373 (2%)

Query: 178 LFDSILYSYRMCDSSPL------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           L D  LY +R   + P       V D L K     ++   A + F +M   G +P + + 
Sbjct: 134 LLDEALYVFRRLRTLPALPACNAVLDGLVKA----RRPGCAWELFDEMLRRGLVPSVVTY 189

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +++      V  A   + +M   +I PNV T   ++ A C+ G I  A  +F  M+ 
Sbjct: 190 NTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKE 249

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TYN L+SGHC +  ++ A+     + K+G+ PN + F TLI GFCK  +  E
Sbjct: 250 AGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSE 309

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F EM    V+P V  YN+L++G  + GN++   +LY+EM R G+  D  T + ++ 
Sbjct: 310 AKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVR 369

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+   A   ++ + ++ +  NA+ Y+ALI   C   N E A      M   G  P
Sbjct: 370 GLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEP 429

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  L+    +      A  +  EM+ K + P+ +  + L  G    G  + A +L 
Sbjct: 430 NVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLH 489

Query: 532 RKMEIRGLLPKGF 544
           ++M   G+ P   
Sbjct: 490 KEMIENGISPNAI 502



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 165/351 (47%), Gaps = 17/351 (4%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A   F  M++ G  P   + N  +S     + V+ A+  Y+E+ ++ ++PN      ++
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLI 298

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             FCK      A  +F  M   G  P+V  YN+L+ G    G    A+     M + G+ 
Sbjct: 299 DGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLC 358

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+  T + ++ G C  G++H A+R    ++   V+ N   YN LI+ Y ++GN E   + 
Sbjct: 359 PDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALAT 418

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
              M   GI+ ++++Y++LI G  K GK + A  +  ++    + PN  TY+ALI G   
Sbjct: 419 CTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAK 478

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE------------ 498
               + AF+L+K MI +G  PN     +L+   C+      A   ++E            
Sbjct: 479 NGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSV 538

Query: 499 -----MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                + E+C+ P+S+I   L  GL+  G+   A KLF  M   G++P  F
Sbjct: 539 FSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSF 589



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 151/308 (49%), Gaps = 17/308 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F  L   +   K+F  A   F +M  +G  P +   N  +     S     AL  Y+E
Sbjct: 292 VIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQE 351

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + P+ +T ++V+   C  G +  A    + ++  G   +   YN LI  +C  G 
Sbjct: 352 MTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGN 411

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M + GI+PNV+++++LI G  K+GK+  A  I++EM A  + PNVVTY  
Sbjct: 412 LEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTA 471

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD----- 428
           LI+G+ + G  +    L++EM+ NGI  + +T + L+ GLC+E + ++A   V +     
Sbjct: 472 LIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLK 531

Query: 429 ------------LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
                       +++  L+PN+  Y  LI G  +      A +L+  M +SG  P+   +
Sbjct: 532 CSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591

Query: 477 EMLMSTFC 484
            +L+   C
Sbjct: 592 TLLIRGQC 599



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 164/333 (49%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP + +CN  L  L+ + R   A   + EM R  + P+V T N +++A    G + +A E
Sbjct: 148 LPALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQE 207

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V+  M +    P+V TY T+I   C +G +  A +  + M++ G+QPN  T+N L+ G C
Sbjct: 208 VWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHC 267

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++  ++ A  ++ E+  + ++PN V + TLI+G+ +         ++ EM R G+   + 
Sbjct: 268 QRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVP 327

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YN+L+ G  + G  ++A  L +++ +  L P+  T S ++ G C       A +  + +
Sbjct: 328 VYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGV 387

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   N   +  L+  +C+  + + A      M E  + P+ +  S L  G    GK 
Sbjct: 388 QEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKM 447

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           ++AM ++ +M  +G+ P        I+   +NG
Sbjct: 448 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 480



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 23/258 (8%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++RG+ D     +  +    +       +++   ++ L   Y        A  T  +M +
Sbjct: 367 VVRGLCDGGQMHVADRFLQGVQEDGVNLNAA--AYNALIDEYCRIGNLEEALATCTRMTE 424

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + S +  +       ++ IA+  Y EM    I PNV T   ++H   K G I+ 
Sbjct: 425 VGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDA 484

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ----------- 330
           A  + K M   G  P+  T + L+ G C +  +  A++F  +ME +G++           
Sbjct: 485 AFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRF--VMEYSGLKCSDIHSVFSNF 542

Query: 331 --------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
                   PN + + TLI+G    G+  EA ++FS M+ + + P+  TY  LI G   +G
Sbjct: 543 TIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLG 602

Query: 383 NSEMGASLYEEMLRNGIK 400
                  LY +M++ G+K
Sbjct: 603 YVLNAMMLYADMMKIGVK 620


>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
          Length = 414

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 179/346 (51%), Gaps = 14/346 (4%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVMHAFCK 275
           C++  Y +       N  L++L+   R   A+  ++   ++ + SP+V++ N+V+   C+
Sbjct: 42  CRIEWYAY-------NNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCR 94

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI-QPNVI 334
           +G +++A+E+ + M   G  P   T N L+ G C    ++   +    ++++G+  PNV+
Sbjct: 95  VGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVV 154

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ ++I G+CK G++ +A  ++++M  +   PN VTYN LINGYG+  + E    +Y ++
Sbjct: 155 TYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQL 214

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +    D++T+N+LI G C+ G+   A  +  ++ ++ + PN  T+S +I   C +  S
Sbjct: 215 ILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRS 274

Query: 455 ERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             A  L + + +R+   P   I+  ++   C+    D A  ++ +M EK   PD    + 
Sbjct: 275 AEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTI 334

Query: 514 LYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           L  G  HC K  +  A+ LF KM   G  P        I+C  + G
Sbjct: 335 LIIG--HCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAG 378



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 131/258 (50%), Gaps = 10/258 (3%)

Query: 290 ESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKN---GIQPNVITFNTLIFGFCK 345
           +  G++P    + + ++G C N GLL  A    NL+ K    G +     +N L+     
Sbjct: 3   DQSGYVPDAGFF-SFVAGSCTNAGLLDAA---ANLLTKGSWFGCRIEWYAYNNLLNTLIA 58

Query: 346 KGKLHEANRIF-SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
            G+  +A  +F S ++    SP+V ++N +I G  +VGN +    L E M   G   D +
Sbjct: 59  HGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTI 118

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSL-VPNASTYSALITGQCVRKNSERAFQLYKS 463
           T N L+ GLC+  +  K   +++ L ++ + +PN  TY+++I+G C     + AF +Y  
Sbjct: 119 TQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYND 178

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M++SG RPN   + +L++ + +  D + A  +  +++     PD +  + L  G   CG+
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQ 238

Query: 524 DELAMKLFRKMEIRGLLP 541
            + AM+++ +M    + P
Sbjct: 239 LDDAMRIWMEMGQHHIQP 256



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 107/231 (46%), Gaps = 1/231 (0%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           +C  + + +  +   Y    + ++A   +  M   G  P   + N  ++    +  ++ A
Sbjct: 148 VCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESA 207

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  Y ++  +   P+V T N ++  +C+ G ++ A+ ++  M      P+V T++ +I  
Sbjct: 208 VRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHS 267

Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C +   + A+   + L  +  I P    +N +I   CK GK+ EAN I ++M+     P
Sbjct: 268 LCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHP 327

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +  TY  LI G+   G      +L+ +M+  G + D +T N+ I  + K G
Sbjct: 328 DKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAG 378



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 7/190 (3%)

Query: 171 SFDLPSKL---FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           + D+ S +   +  IL+S   C    + F+ L   Y    +  +A   + +M  +   P 
Sbjct: 201 ALDMESAVRMYWQLILHS---CPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPN 257

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
           + + +  + SL    R   AL   +E+  R  I P  +  N ++   CK G ++ A  + 
Sbjct: 258 VYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIV 317

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +ME  G  P   TY  LI GHC KG +  A+   + M + G +P+ IT N+ I    K 
Sbjct: 318 TDMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKA 377

Query: 347 GKLHEANRIF 356
           G  +E ++I 
Sbjct: 378 GMPNEVHQIM 387


>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial [Vitis vinifera]
 gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 57/441 (12%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           L+P RV  ++ + Q++  L+L+ F    + H+  +   ET+  ++  L+K R F+  E++
Sbjct: 99  LSPKRVVSMISR-QQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETL 157

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +   L          LF +++ +Y                +A R K   A  TF ++  +
Sbjct: 158 ISQ-LHKSQIKCGENLFITVIRNY---------------GFAGRPKL--AIRTFLRIPSF 199

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIER 281
           G  P + S N  L++L+ ++R D+    +K  R+   I PNV+T N+++ A CK   I+ 
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 282 AVEVFKNMESMGFIPSVTTYNT-----------------------------------LIS 306
           A+ V + M +MGFIP+V TY T                                   L+ 
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMD 319

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C KG    A+K  + ME+N ++PN +T+  +I  +CK+ K  E   +  +M      P
Sbjct: 320 GYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIP 379

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +      +I+   + G  E+   L++++L+     D    + LI  LCKEGK  +A  L 
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            + +K S +P+  TY+ALI G C       A +L+ +M+  GC PN   + ML+  FC+ 
Sbjct: 440 DEFEKGS-IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498

Query: 487 EDFDRAAEVLLEMLEKCMAPD 507
            +      V+ EML+    P+
Sbjct: 499 GNAREGIRVMEEMLDNGCLPN 519



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 2/278 (0%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           A+  F  + S G  PSV ++NTL++    NK    + + FKN  +K GI PNV T N L+
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILV 248

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CKK  +  A R+  EM A    PNVVTY T++ GY   G+      ++ E+L  G  
Sbjct: 249 KALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWV 308

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY  L+ G CK+G+   A  ++ ++++N + PN  TY  +I   C  K S     L
Sbjct: 309 PDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNL 368

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M+     P+  +   ++   C+    + A E+  ++L+K   PD+ I S L   L  
Sbjct: 369 LDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCK 428

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            GK   A KLF + E +G +P        I    E GE
Sbjct: 429 EGKVWEARKLFDEFE-KGSIPSTLTYNALIAGMCEGGE 465



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 110/240 (45%), Gaps = 5/240 (2%)

Query: 324 MEKNGIQPNVITFNTLI--FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + K+ I+     F T+I  +GF  + KL  A R F  + +  + P+V ++NTL+N   Q 
Sbjct: 161 LHKSQIKCGENLFITVIRNYGFAGRPKL--AIRTFLRIPSFGLQPSVRSFNTLLNTLVQN 218

Query: 382 GNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
              ++   +++   +  GI  ++ T N L+  LCK+     A  +++++     +PN  T
Sbjct: 219 KRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVT 278

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ ++ G   + +   A +++  ++  G  P+   + +LM  +C+   F  A +V+ EM 
Sbjct: 279 YTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEME 338

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           E  + P+ +    +        K    + L   M  +  +P      R I+   E G+ E
Sbjct: 339 ENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVE 398


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 185/386 (47%), Gaps = 3/386 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           +S  +++ G      F+    L  ++       DS+     ++ + +  + +FRN TD F
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCT--VVVRAFCRQGRFRNVTDLF 239

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M + G  P + + + ++  L +   V  A    +EM    + PNVYT   ++   CK+
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 277 GIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           G +ERA  +F K ++S  + P+V TY  +I G+C +G L+ A      M + G+ PN  T
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           + TLI G CK G    A  + ++MK     PN+ TYN +I G+ + G  +    +     
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G+ +D +TY  LI   CK+G    A  L K + + S  P+  TY+ +I   C ++  E
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQME 479

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           ++ QL+   +  G  P K  +  +++ +C+      A +V   M++    PDSI    L 
Sbjct: 480 QSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALI 539

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L    + E A  LF  M  + L+P
Sbjct: 540 SSLCKESRLEEARALFETMLDKHLVP 565



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 157/340 (46%), Gaps = 8/340 (2%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLS-SLLDSERVDIALGFYKEMRR--NRISPNVY 264
           + R A D   ++R +G   ++E+ N  L   L        A   +  M R    + P+  
Sbjct: 123 RLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDHR 182

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           +   ++   C+ G  E A  +   M + GF     T   ++   C +G           M
Sbjct: 183 SFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRRM 242

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G  PN++ ++  I G C++G + +A  +  EM    + PNV T+ +LI+G  ++G  
Sbjct: 243 SEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWM 302

Query: 385 EMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
           E    L+ ++++ +  K ++ TY  +I G CKEGK  +A  L+  + +  L PN +TY+ 
Sbjct: 303 ERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTT 362

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G C   + +RAF+L   M   G  PN + +  ++  FC+      A +VL     + 
Sbjct: 363 LIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQG 422

Query: 504 MAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           +  D +  + L +   HC +  +  A+ LF++M  +   P
Sbjct: 423 LHLDKVTYTILIT--EHCKQGHITCALDLFKQMAEKSCHP 460



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/270 (27%), Positives = 131/270 (48%), Gaps = 5/270 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R ++ LG    M    ++PN  T   ++H  CK G  +RA E+   M+  GF+P++ TYN
Sbjct: 340 RAEMLLG---RMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYN 396

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I G C KG +  A K   +    G+  + +T+  LI   CK+G +  A  +F +M   
Sbjct: 397 AIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEK 456

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           +  P++ TY T+I  Y Q    E    L+++ L  G+     TY ++I G C+ GK   A
Sbjct: 457 SCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSA 516

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             + + + ++  +P++ TY ALI+  C     E A  L+++M+     P       L   
Sbjct: 517 LKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYE 576

Query: 483 FCQNEDFDRAAEVL--LEMLEKCMAPDSII 510
           +C+ +    A   L  L+  ++    D+++
Sbjct: 577 YCRRDKITIAVSFLDRLDKRQQAHTADALV 606



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 3/342 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   Y    K   A     +M + G  P   +    +         D A     +M+
Sbjct: 325 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMK 384

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN+YT N ++  FCK G I+ A +V +   S G      TY  LI+ HC +G ++
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHIT 444

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M +    P++ T+ T+I  +C++ ++ ++ ++F +  +  + P   TY ++I
Sbjct: 445 CALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMI 504

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY ++G       ++E M+++G   D +TY ALI  LCKE + ++A  L + +    LV
Sbjct: 505 AGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLV 564

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   T   L    C R     A      + +   R   H  + L+       + D A+  
Sbjct: 565 PCDVTRVTLAYEYCRRDKITIAVSFLDRLDK---RQQAHTADALVRKLSTVGNLDAASLF 621

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           L  +L+K  A D    +   +  +   +  LA ++  K+  R
Sbjct: 622 LKNVLDKHYAVDHATYTSFINSCYESNRYALASEISEKISKR 663



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 139/271 (51%), Gaps = 8/271 (2%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLIS-GHCNKGLLSLAMKFKNLMEK--NGIQPNV 333
           G +  A ++   + S G    V T N ++  G  + G  + A +  + M +   G++P+ 
Sbjct: 122 GRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRPDH 181

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            +F  L+ G C++G+  EA+ + + M A     +  T   ++  + + G       L+  
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G   +++ Y+A I GLC+ G  K+A ++++++    L PN  T+++LI G C    
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 454 SERAFQLYKSMIRSGC-RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
            ERAF+L+  +++S   +PN H + +++  +C+     RA  +L  M+E+ +AP++   +
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 513 ELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
            L  G  HC  G  + A +L  KM++ G LP
Sbjct: 362 TLIHG--HCKGGSFDRAFELMNKMKLEGFLP 390



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 3/217 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L   +  +     A D F QM +    P I +    ++      +++ +   + +
Sbjct: 428 VTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDK 487

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
                + P   T   ++  +C+LG +  A++VF+ M   G +P   TY  LIS  C +  
Sbjct: 488 CLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESR 547

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A      M    + P  +T  TL + +C++ K+  A      +   +      T + 
Sbjct: 548 LEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRL---DKRQQAHTADA 604

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           L+     VGN +  +   + +L     VD  TY + I
Sbjct: 605 LVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFI 641


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 200/452 (44%), Gaps = 30/452 (6%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLE--THSIVLHILTK 152
           K L   S  +TP +V+  LL+ ++D   +   F        +    +  T  +++  L  
Sbjct: 4   KTLLKWSKQITPSKVEQ-LLRAERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVS 62

Query: 153 NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM------------------CDSSPL 194
             +F+ +E +L   +  +   +  ++F SI   Y                    C  +  
Sbjct: 63  ANEFRPAEEMLNR-MKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDK 121

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL-DSERVDIALGFYKE 253
            +  +F       + + A   +  MR+ G    + S N  + +L  +S  +D A   ++E
Sbjct: 122 SYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFRE 181

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +    P+ YT   +++  CKLG    A E+FK M++ G  PSV TY+ L+ G C  G 
Sbjct: 182 MPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGN 241

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  AM   + M+K  I+PNV T+++L+ G CK G   EA  +   M      PN+VTY+T
Sbjct: 242 VDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYST 301

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LING  + G         + M   G+K D   Y  +I G C   K ++AA  + ++    
Sbjct: 302 LINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQ 361

Query: 434 LVPNASTYS-------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + PN  T+S        ++ G C   N  R+FQLY  M   G   +   F+ L+  FC+ 
Sbjct: 362 ISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKK 421

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            D  +AA +  EM+     PD  I S +  G 
Sbjct: 422 GDLHKAARIFDEMVLDGCVPDHGIWSAVVGGF 453



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 136/280 (48%), Gaps = 7/280 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R CD     +  L        K   A + F +M   G  P + + +  +  L  +  VD 
Sbjct: 185 RGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDE 244

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G + +M++  I PNV+T + +M   CK G    A+E+ + M      P++ TY+TLI+
Sbjct: 245 AMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLIN 304

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +G L+ A++  + M+  G++P+   +  +I GFC   K  EA     EM    +SP
Sbjct: 305 GLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISP 364

Query: 367 NVVTY-------NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           N VT+       N ++ G    GN      LY  M   GI +D  T+++L+   CK+G  
Sbjct: 365 NRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDL 424

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
            KAA +  ++  +  VP+   +SA++ G   R+    AF+
Sbjct: 425 HKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 173/368 (47%), Gaps = 19/368 (5%)

Query: 175 PSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
           PSK+ + +L + R    + ++FD     Y++   FR+   TF  M     +  + S N+F
Sbjct: 15  PSKV-EQLLRAERDLRKAKIIFDSASAEYSN--GFRHDHTTFGVM-----ISKLVSANEF 66

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
             +       +  L   KE  + RI+  ++    +   + ++ +   A+ VF  M   G 
Sbjct: 67  RPA-------EEMLNRMKE-EKCRITEEIFL--SICRGYGRVHMPLDAIRVFHKMNDFGC 116

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK-KGKLHEAN 353
            P+  +Y ++ +    +  L +AM F   M + G++ +V++ N LI   CK  G +  A 
Sbjct: 117 KPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAF 176

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            IF EM      P+  TY TLING  ++G +     L++EM   G    ++TY+ L+ GL
Sbjct: 177 EIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGL 236

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C+ G   +A  L   + K ++ PN  TYS+L+ G C    S  A +L + M+R   +PN 
Sbjct: 237 CQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNM 296

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L++  C+      A E L  M  + + PD+ +  ++ +G  +  K + A     +
Sbjct: 297 VTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDE 356

Query: 534 MEIRGLLP 541
           M +  + P
Sbjct: 357 MVLGQISP 364



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 5/221 (2%)

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           NG + +  TF  +I       +   A  + + MK          + ++  GYG+V     
Sbjct: 44  NGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLD 103

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              ++ +M   G K    +Y ++   L +E + K A    K + +  +  +  + + LI 
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIK 163

Query: 447 GQCVRKNS---ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
             C  KNS   + AF++++ M + GC P+ + +  L++  C+      A E+  EM  K 
Sbjct: 164 ALC--KNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKG 221

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            +P  +  S L  GL   G  + AM LF KM+ + + P  F
Sbjct: 222 CSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVF 262


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 162/344 (47%), Gaps = 16/344 (4%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            +++A R   RN       +  Y     + +  + LSSLL                R   
Sbjct: 60  MESFASRMPARNLRTYTTLINAYCLAGDLPASKRHLSSLL----------------RAGF 103

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           +P+ +     +  +C+ G++  A  +F  M   G + +  TY  L+ G C  G++  AM 
Sbjct: 104 APDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMS 163

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M+ +G  P+   + T++ G C  G+  EA  + S+  A    PNVV YN LI+GY 
Sbjct: 164 VFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYC 223

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            VG+ E+   ++E M  NG   ++ TY  LI G CK  K  +A  L   +    LVPN  
Sbjct: 224 NVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVV 283

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ALI GQC     + A++L +SM  SG  PN+    +L+   C++E    A  +L  +
Sbjct: 284 TYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSL 343

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           ++K +  + I+ + L  GL   G+   A +L + +  +G +P  
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA 387



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 151/315 (47%), Gaps = 8/315 (2%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L  L  +  V  A+  +  M+ +  +P+ +    ++H  C  G    A  +  +  + G
Sbjct: 148 LLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEG 207

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           F P+V  YN LI G+CN G L LA+     M+ NG  PNV T+  LI GFCK  KL  A 
Sbjct: 208 FEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAM 267

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +FS M    + PNVVTY  LI G    G  +    L + M  +G+  +  T + LI  L
Sbjct: 268 MLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDAL 327

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK  +  +A  L+  L +  +  N   Y++LI G C       A +L ++++  G  P+ 
Sbjct: 328 CKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDA 387

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD----SIILSELYSGLHHCGKDELAMK 529
           H +  L+   C+ ++   A  VL +M+EK + P     +II+ EL   +   G D  + K
Sbjct: 388 HTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL---VREVGADG-SKK 443

Query: 530 LFRKMEIRGLLPKGF 544
           +  KM   G+ P  F
Sbjct: 444 ILDKMIAAGIKPDVF 458



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 162/353 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C   P V+  +        + R A          GF P +   N  +    +   +++A+
Sbjct: 173 CAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAV 232

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++ M  N  SPNV T   ++  FCK   ++RA+ +F  M   G +P+V TY  LI G 
Sbjct: 233 DVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQ 292

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G L  A +    ME +G+ PN  T + LI   CK  ++ EA  +   +    +  N 
Sbjct: 293 CSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNE 352

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           + Y +LI+G  + G       L + ++  G   D  TY++LI GLC++ +  +A  ++ D
Sbjct: 353 IVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDD 412

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + +  + P+  TY+ +I        ++ + ++   MI +G +P+   + + + ++C    
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGR 472

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + A  ++L M++  + P+ +  + L  G  + G    A   F+ M   G  P
Sbjct: 473 MEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 137/282 (48%), Gaps = 4/282 (1%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
             +T   ++H  C  G++  A+ VF  M++ G  P    Y T++ G C  G    A    
Sbjct: 141 TAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLL 200

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           +     G +PNV+ +N LI G+C  G L  A  +F  M     SPNV TY  LI+G+ + 
Sbjct: 201 SDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKS 260

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
              +    L+  M+  G+  +++TY ALI G C +G+   A  L++ ++ + LVPN  T 
Sbjct: 261 RKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI   C  +    A  L  S+I+ G + N+ ++  L+   C+   F  A  ++  ++ 
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380

Query: 502 KCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           +   PD+   S L  GL  C + EL  AM +   M  +G+ P
Sbjct: 381 QGFVPDAHTYSSLIDGL--CRQKELSEAMLVLDDMMEKGVQP 420



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/327 (23%), Positives = 153/327 (46%), Gaps = 2/327 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G  +    +L   +F+ +      C  +   +  L   +   +K   A   F +M 
Sbjct: 217 ALIDGYCNVGDLELAVDVFERM--DVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G +P + +    +       ++D A    + M  + + PN +T ++++ A CK   + 
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +  ++   G   +   Y +LI G C  G  + A +    +   G  P+  T+++LI
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C++ +L EA  +  +M    V P+ VTY  +I+   +   ++    + ++M+  GIK
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+ TY   +   C EG+ + A +++  +  + + PN  TY+ALI G      + +AF  
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +K M+ +GC+PN+  + +L+    + E
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKE 541



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 152/409 (37%), Gaps = 86/409 (21%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + G +P   +C+  + +L   ERV  A      + +  I  N      ++   CK G 
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM-KFKNLMEKN---------- 327
              A  + + + S GF+P   TY++LI G C +  LS AM    ++MEK           
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427

Query: 328 ------------------------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
                                   GI+P+V T+   +  +C +G++ +A  +   M    
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK----------------------- 400
           V PN+VTYN LI GY  +G +    S ++ M+ NG K                       
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547

Query: 401 ----------------------------VDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
                                        +I  YN  +  LC+  +  +A  L+ ++   
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
           +L P+   Y+++I   C  K    A     SM++SG  P    +  ++S+ C+      A
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +V  +ML K    + I    L  GL   G       L   ME +   P
Sbjct: 668 KQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRP 716



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 72/384 (18%), Positives = 136/384 (35%), Gaps = 53/384 (13%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +  F    +L  +++    + D+    +  L      +K+   A      M 
Sbjct: 357 SLIDGLCKAGRFAAADRLMQTLVSQGFVPDAH--TYSSLIDGLCRQKELSEAMLVLDDMM 414

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   +    +  L+     D +     +M    I P+V+T  + + ++C  G +E
Sbjct: 415 EKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRME 474

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN-------- 332
            A  +  +M   G  P++ TYN LI G+ N GL S A      M  NG +PN        
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534

Query: 333 -------------------------------------------VITFNTLIFGFCKKGKL 349
                                                      +  +N  +   C+  +L
Sbjct: 535 RLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRL 594

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM++ N++P+   Y ++I    ++       +  + M+++G    + +Y  +
Sbjct: 595 DEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHI 654

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  LC+EG  + A  +  D+           +  LI G   +        L   M     
Sbjct: 655 ISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNY 714

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAA 493
           RP+  ++  L        D    A
Sbjct: 715 RPSDALYARLTGKITDANDIQEIA 738


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 153/295 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            L  ++EM    I PNV   + +++  C++G +  AV +F  M S G   +V TYN+LI 
Sbjct: 98  GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIH 157

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C  GL   A +  + M   GI P+V+TF TLI    KKGK+ EA +IF  M     +P
Sbjct: 158 ASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP 217

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+VTYN+L+NG       +    L+E M+  GIK+D+++YN LI G C  GKT++A  L 
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLF 277

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + +    L P+ +TY+ L+           A +L+ +M   G  P+   + +L+   C+N
Sbjct: 278 RKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKN 337

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + A +V   +      P   I S L  G+    + E AM++F ++   GL+P
Sbjct: 338 GCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVP 392



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 159/323 (49%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M + G  P +   +  ++ L    ++  A+  + EM    I  NV T N ++HA C+
Sbjct: 102 FREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCR 161

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
            G+ + A   F  M   G +P V T+ TLI     KG +  A K   LM K G  PN++T
Sbjct: 162 FGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVT 221

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +N+L+ G C   ++  A R+F  M    +  +V++YNTLINGY   G +E   +L+ +M 
Sbjct: 222 YNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQ 281

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
              +   I TY  L+  L + G+ + A  L  ++      P+  TY+ L+ G C     E
Sbjct: 282 YEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIE 341

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  +++S+     +P+  I+ +L+    Q   ++ A E+  E+    + P+ +  + + 
Sbjct: 342 EAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMI 401

Query: 516 SGLHHCGKDELAMKLFRKMEIRG 538
           +GL   GK   A +LF +ME  G
Sbjct: 402 NGLCKEGKLLEAERLFVQMEESG 424



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 166/337 (49%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L K      K  +A + F +M   GF   I      +++L  + +   A+  ++ M    
Sbjct: 15  LVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRMLSEI 74

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
            S N +T  +V+ + CK G+  + +++F+ M +MG  P+V  Y++LI+G C  G L  A+
Sbjct: 75  CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAV 134

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M   GI+ NVIT+N+LI   C+ G   EA R FS+M    + P+VVT+ TLI+  
Sbjct: 135 NLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHL 194

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G  +    ++E M++ G   +I+TYN+L+ GLC   +   A  L + + +  +  + 
Sbjct: 195 SKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDV 254

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y+ LI G C    +E A  L++ M      P+   + +L+    QN     A E+   
Sbjct: 255 ISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNN 314

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           M     +P     + L  GL   G  E A+ +FR ++
Sbjct: 315 MQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLK 351



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 158/319 (49%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P + + +  +  +    +V  AL  + +M R+    ++     +++A  K     RA
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           VE+ + M S     +  TY  +I   C  GL    +K    M   GI PNVI +++LI G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+ GKL EA  +F EM +  +  NV+TYN+LI+   + G  +     + +M+  GI  D
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++T+  LI  L K+GK ++A  + + + K    PN  TY++L+ G C+    + A +L++
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  G + +   +  L++ +C +   + A  +  +M  + + P     + L   L+  G
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303

Query: 523 KDELAMKLFRKMEIRGLLP 541
           +   A +LF  M+I G  P
Sbjct: 304 RIRTAKELFNNMQICGQSP 322



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 149/312 (47%), Gaps = 3/312 (0%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           ++ AT TF QM   G LP + +    +  L    +V  A   ++ M +   +PN+ T N 
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           +++  C    ++ AV +F+ M   G    V +YNTLI+G+C  G    AM     M+   
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           + P++ T+  L+    + G++  A  +F+ M+    SP++ TY  L++G  + G  E   
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
            ++  +     K  I  Y+ LI G+ +  + + A  +  ++    LVPN  TY+ +I G 
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD- 507
           C       A +L+  M  SGC  ++  F  ++  F Q     +A E L  M EK  +P+ 
Sbjct: 405 CKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464

Query: 508 --SIILSELYSG 517
             +++L  LY+ 
Sbjct: 465 SVTLMLVNLYAA 476



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 164/372 (44%), Gaps = 14/372 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +V+  L        K R A + F +M   G    + + N  + +           G +KE
Sbjct: 115 IVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHA-------SCRFGLWKE 167

Query: 254 MRR-------NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
             R         I P+V T   ++    K G ++ A ++F+ M   G  P++ TYN+L++
Sbjct: 168 ATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLN 227

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C    +  A++   +M + GI+ +VI++NTLI G+C  GK  EA  +F +M+   ++P
Sbjct: 228 GLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTP 287

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++ TY  L+    Q G       L+  M   G    + TY  L+ GLCK G  ++A  + 
Sbjct: 288 SITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVF 347

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + L      P+   YS LI G    +  E A +++  +   G  PN   + ++++  C+ 
Sbjct: 348 RSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKE 407

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
                A  + ++M E     D I  + +  G     + + AM+  ++M  +   P     
Sbjct: 408 GKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVT 467

Query: 547 LRTINCAPENGE 558
           L  +N    + +
Sbjct: 468 LMLVNLYAADAQ 479



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 101/216 (46%)

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           K+G QPN++T +TL+ G C +GK+ +A  +F +M  +    +++ Y  LIN   +   + 
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L+  ML      +  TY  +I  LCK+G   K   + +++    + PN   YS+LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A  L+  M+  G + N   +  L+   C+   +  A     +M+ + + 
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           PD +  + L   L   GK + A K+F  M  +G  P
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAP 217



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 114/246 (46%), Gaps = 6/246 (2%)

Query: 143 HSIVLHILTKNRKFK----SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           H++ L  +   R  K    S  +++ G   S   +    LF  +   Y     S   + +
Sbjct: 237 HAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKM--QYEELTPSITTYTI 294

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L K      + R A + F  M+  G  P +++    L  L  +  ++ A+  ++ ++  +
Sbjct: 295 LLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P++   ++++    +    E A+E+F  + ++G +P++ TYN +I+G C +G L  A 
Sbjct: 355 YKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAE 414

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    ME++G + + I+FN +I GF ++ ++ +A      M+  N SPN      L+N Y
Sbjct: 415 RLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLY 474

Query: 379 GQVGNS 384
                S
Sbjct: 475 AADAQS 480



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 74/145 (51%)

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           +++G + +++T + L+ G+C EGK   A  L   + ++    +   Y  LI      + +
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            RA +L++ M+   C  N   + +++ + C++    +  ++  EM+   + P+ I+ S L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGL 539
            +GL   GK   A+ LF +M  +G+
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGI 145


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDI 246
           C  +   +++L K      + + A +    M D G    P + S    ++       +D 
Sbjct: 158 CIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G Y EM    I PNV T + ++ A CK   +++A+EV  +M   G +P+  TYN+++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA ++F  M    + P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TY TL+ GY   G       L + M+RNGI  +   ++ LI    K+GK  +A  + 
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L P+  TY  +I   C     E A + ++ MI     P   ++  L+ + C  
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + +D+A E++LEML++ +  D+I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKP 512



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+GF K+M  + + P+V T N +M 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ LI  + K+GK+ +A  +FS+M+   ++P+ VTY T+I    + G  E     +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+   +    + YN+LI  LC   K  KA  L+ ++    +  +   ++++I   C  
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+  +C     D A ++L  M+   M PD +  
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + E A+ LFR+ME  G+ P
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+SP     N ++H+ C     ++A E+   M   G       +N++I  HC +G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT++TLI G+C  GK+ EA ++ + M +  + P+ VTYNTL
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 676 LFAALSANGLVPD 688



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++P+  T   V+   CK G +E A+  F+ M      P    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI   C       A +    M   GI  + I FN++I   CK+G++ E+ ++F  M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+++TY+TLI+GY   G  +    L   M+  G+K D +TYN LI G CK  + + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L ++++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +   GL+P 
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP- 687

Query: 543 GFDKLRTINCAPEN 556
               +RT +   EN
Sbjct: 688 ---DVRTYSLMAEN 698



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++ Y  +M D   SP  +V++ L  +     K+  A +   +M D G  L  I  
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-- 480

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + P++ T + ++  +C  G ++ A ++ 
Sbjct: 481 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TYNTLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I  L K G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +GC  N  +   ++    Q  D  RA   L  + EK
Sbjct: 718 NGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 133/304 (43%), Gaps = 18/304 (5%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIER-----AVEVFKNMESMG---FIPSVTTY 301
           F + +RR R   ++Y LN      C L  + R     AV  +  M   G     P++ TY
Sbjct: 42  FDELLRRGR-GASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMK 360
             LI   C  G L L       + K G + + I F  L+ G C   +  +A + +   M 
Sbjct: 95  GILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 154

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGK 418
                PNV +YN L+ G      S+    L + M  +G     D+++Y  +I G  KEG 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA     ++    ++PN  TYS++I   C  +  ++A ++  SM+++G  PN   +  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  +C +     A   L +M    + PD +  + L   L   G+   A K+F  M  RG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 539 LLPK 542
           L P+
Sbjct: 335 LKPE 338



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 26/345 (7%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFK 201
           ++H L    K+  ++ ++  +LD     L +  F+SI+ S+    R+ +S  L FDL+ +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVR 507

Query: 202 T---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                           Y    K   AT     M   G  P   + N  ++      R++ 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++EM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A  + 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V TY+ +     + G  E    L+  M  NG   +    N+++  L + G   +A   
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 426 VKDLDKNSLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRS 467
           +  +D+      AST S    L++G   ++      + YKS I S
Sbjct: 747 LFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIES 791


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 171/347 (49%), Gaps = 5/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L K +    K   A  TF ++   GF P + + +  L  L   +RV  AL F+ ++ 
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC 173

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    PNV     +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 174 K----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229

Query: 316 LAMKFKNLMEK-NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A+     ME+ + I+PNV+ ++ +I G  K G+  +A  +FSEM+   +SPN+ TYN +
Sbjct: 230 SALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCM 289

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING+   G       L  EM    +  D++T++ LI  L KEGK  +A  L  ++    +
Sbjct: 290 INGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGI 349

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TY+++I G   +   + A +++  M   GC P+   F +L+  +C  +  D   +
Sbjct: 350 IPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMK 409

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +L EM  + +  ++I  + L  G    G    A+ L ++M   G+ P
Sbjct: 410 LLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCP 456



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 13/344 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F +L        KF  A + + +M   G +P   + N  +       R+D A   +  
Sbjct: 319 VTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYL 378

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V T ++++  +C    ++  +++   M   G + +  TY TLI G C  G 
Sbjct: 379 MATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGN 438

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT----------- 362
           L+ A+     M  +G+ PNV+T NTL+ G C  GKL +A  +F  M+ +           
Sbjct: 439 LNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFN 498

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           +V P+V TYN LI G    G       LYEEM   G+  D +TYN++I GLCK+ +  +A
Sbjct: 499 DVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEA 558

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +   +      P+  T++ LI G C         +++  M R G   N   +  L+  
Sbjct: 559 TQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHG 618

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           FCQ  + + A ++  EM+   + PD+I +  + +GL    K+EL
Sbjct: 619 FCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWS--KEEL 660



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 172/377 (45%), Gaps = 46/377 (12%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A + F +M++ G  P + + N  ++    S R   A    +EM   ++SP+V T ++++
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI 325

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +A  K G    A E++  M   G IP+  TYN++I G   +  L  A +   LM   G  
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS 385

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+VITF+ LI G+C   ++ +  ++  EM    +  N +TY TLI+G+ Q+GN      L
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445

Query: 391 YEEMLRNGI----------------------------------------------KVDIL 404
            +EM+ +G+                                              + D+ 
Sbjct: 446 LQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQ 505

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN LI GL  EGK  +A  L +++    LVP+  TY+++I G C +   + A Q++ SM
Sbjct: 506 TYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G  P+   F  L++ +C+        EV  EM  + +  ++I    L  G    G  
Sbjct: 566 GSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNI 625

Query: 525 ELAMKLFRKMEIRGLLP 541
             A+ +F++M   G+ P
Sbjct: 626 NGALDIFQEMISSGVYP 642



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 169/366 (46%), Gaps = 29/366 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T S++++ L K  KF  +E +   +L       P  +  + +    M D           
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEML-------PRGIIPNTITYNSMIDG---------- 362

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            ++ + +   A   F  M   G  P + + +  +     ++RVD  +    EM R  +  
Sbjct: 363 -FSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVA 421

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N  T   ++H FC+LG +  A+++ + M S G  P+V T NTL+ G CN G L  A++  
Sbjct: 422 NTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMF 481

Query: 322 NLMEK-----------NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            +M+K           N ++P+V T+N LI G   +GK  EA  ++ EM    + P+ +T
Sbjct: 482 KVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTIT 541

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN++I+G  +    +    +++ M   G   D++T+  LI G CK G+      +  ++ 
Sbjct: 542 YNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMG 601

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  +V NA TY  LI G C   N   A  +++ MI SG  P+      +++     E+  
Sbjct: 602 RRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELK 661

Query: 491 RAAEVL 496
           RA + L
Sbjct: 662 RAVQCL 667



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 171/336 (50%), Gaps = 5/336 (1%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K   +A D F  M     LP +    K L  ++  ER D+ +  +++M   RI  N+Y+ 
Sbjct: 55  KGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSF 114

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++  FC    +  A+  F  +  +GF PS+ T++TL+ G C +  +S A+ F + + K
Sbjct: 115 TILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK 174

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
               PNVI F TL+ G C++G++ EA  +   M    + PN +TY T+++G  ++G++  
Sbjct: 175 ----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 230

Query: 387 GASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             +L  +M   + IK +++ Y+A+I GL K+G+   A  L  ++ +  + PN  TY+ +I
Sbjct: 231 ALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMI 290

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A +L + M      P+   F +L++   +   F  A E+  EML + + 
Sbjct: 291 NGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGII 350

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P++I  + +  G     + + A ++F  M  +G  P
Sbjct: 351 PNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 171/380 (45%), Gaps = 12/380 (3%)

Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
           +  ++ +++ + +++C  + + F  L        +   A     +M + G  P   +   
Sbjct: 158 VEDRVSEALHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGT 217

Query: 234 FLSSLLDSERVDIALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            +  +        AL   ++M   +RI PNV   + ++    K G    A  +F  M+  
Sbjct: 218 IVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G  P++ TYN +I+G C+ G  S A +    M +  + P+V+TF+ LI    K+GK  EA
Sbjct: 278 GISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEA 337

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +++EM    + PN +TYN++I+G+ +    +    ++  M   G   D++T++ LI G
Sbjct: 338 EELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDG 397

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C   +      L+ ++ +  LV N  TY+ LI G C   N   A  L + MI SG  PN
Sbjct: 398 YCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPN 457

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM-----------APDSIILSELYSGLHHC 521
                 L+   C N     A E+   M +  M            PD    + L  GL + 
Sbjct: 458 VVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINE 517

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A +L+ +M  RGL+P
Sbjct: 518 GKFSEAEELYEEMPHRGLVP 537


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 170/362 (46%), Gaps = 35/362 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M +YGF P   +    L+ L  S    +AL  +++M    I  +V   ++V+ + CK G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG------------------------- 312
             + A+ +F  ME  G    V TY++LI G CN G                         
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319

Query: 313 -LLSLAMKFKNLMEKN---------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            L+ + +K   L+E           GI P+ IT+N+LI GFCK+  LHEAN++F  M + 
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P++VTY+ LIN Y +    + G  L+ E+   G+  + +TYN L+LG C+ GK   A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L +++    + P+  TY  L+ G C      +A ++++ M +S       I+ +++  
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C     D A  +   + +K + PD +  + +  GL   G    A  LFRKM+  G  P 
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

Query: 543 GF 544
            F
Sbjct: 560 DF 561



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/361 (26%), Positives = 175/361 (48%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++   Y  +KK   A     +    G+ P   + +  ++      RV  A+     M   
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           +  P++ T++ +++  C  G +  A+ +   M   GF P   TY  +++  C  G  +LA
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +     ME+  I+ +V+ ++ +I   CK G   +A  +F+EM+   +  +VVTY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
               G  + GA +  EM+   I  D++T++ALI    KEGK  +A  L  ++    + P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++LI G C       A Q++  M+  GC P+   + +L++++C+ +  D    +  
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           E+  K + P++I  + L  G    GK   A +LF++M  RG+ P        ++   +NG
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469

Query: 558 E 558
           E
Sbjct: 470 E 470



 Score =  158 bits (399), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 35/369 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A D F  M     LP     N+  S++  +++ D+ LGF K M  N I  ++YT+ 
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ +C+   +  A  V      +G+ P   T++TL++G C +G +S A+   + M + 
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEA-----------------------NR---------- 354
             +P+++T +TLI G C KG++ EA                       NR          
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229

Query: 355 --IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M+  N+  +VV Y+ +I+   + G+ +   SL+ EM   GIK D++TY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC +GK    A +++++   +++P+  T+SALI           A +LY  MI  G  P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  FC+      A ++   M+ K   PD +  S L +      + +  M+LFR
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409

Query: 533 KMEIRGLLP 541
           ++  +GL+P
Sbjct: 410 EISSKGLIP 418



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    +   A     +M +    P + + +  ++ L    RV  AL     
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+  T   V++  CK G    A+++F+ ME      SV  Y+ +I   C  G 
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+   N ME  GI+ +V+T+++LI G C  GK  +  ++  EM   N+ P+VVT++ 
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       LY EM+  GI  D +TYN+LI G CKE    +A  +   +    
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TYS LI   C  K  +   +L++ +   G  PN   +  L+  FCQ+   + A 
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + P  +    L  GL   G+   A+++F KM+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 168/350 (48%), Gaps = 4/350 (1%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           +S + + ++  +      F +A   F +M   G    + + +  +  L +  + D     
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            +EM    I P+V T + ++  F K G +  A E++  M + G  P   TYN+LI G C 
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +  L  A +  +LM   G +P+++T++ LI  +CK  ++ +  R+F E+ +  + PN +T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTL+ G+ Q G       L++EM+  G+   ++TY  L+ GLC  G+  KA  + + + 
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K+ +      Y+ +I G C     + A+ L+ S+   G +P+   + +++   C+     
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
            A  +  +M E    PD    + L     H G   L  +++L  +M++ G
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRA--HLGGSGLISSVELIEEMKVCG 590



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 6/252 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +     +++FD  L   + C+   + + +L  +Y   K+  +    F ++ 
Sbjct: 355 SLIDGFCKENCLHEANQMFD--LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P   + N  +     S +++ A   ++EM    + P+V T  +++   C  G + 
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+ M+       +  YN +I G CN   +  A      +   G++P+V+T+N +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
            G CKKG L EA+ +F +MK    +P+  TYN LI  +  +G S + +S  L EEM   G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH--LGGSGLISSVELIEEMKVCG 590

Query: 399 IKVDILTYNALI 410
              D  T   +I
Sbjct: 591 FSADSSTIKMVI 602



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 86/183 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +    K   A + F +M   G  P + +    L  L D+  ++ AL  +++
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+++R++  +   N+++H  C    ++ A  +F ++   G  P V TYN +I G C KG 
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           LS A      M+++G  P+  T+N LI        L  +  +  EMK    S +  T   
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600

Query: 374 LIN 376
           +I+
Sbjct: 601 VID 603


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 164/350 (46%), Gaps = 9/350 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L  T   R + R+A      M   G  P + + N  L +         A+     MR
Sbjct: 170 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 229

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +PN  T N++M   C  G ++ A+E+ +N+ S G  PS   YNT++ G C+     
Sbjct: 230 AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 289

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M +    PN  TFN +I+  C+KG L +A ++  +M     + N+VTYN +I
Sbjct: 290 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 349

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  +  N +    L  +M   G K DI+TYN L+ GLC   +   A  L+ ++ +N  +
Sbjct: 350 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCL 409

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI   C +     A +++K M   GC PN   +  ++S   +    D+A E+
Sbjct: 410 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKD----ELAMKLFRKMEIRGLLP 541
             EM  K   PD I     Y  L  C  D    E A++  RK++  G+ P
Sbjct: 470 FNEMGHKGFNPDKI-----YQLLAECLNDDDTIEEAIQTVRKLQDSGISP 514



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 168/339 (49%), Gaps = 10/339 (2%)

Query: 213 TDTFCQM-------RDYGFLPIIESC---NKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           TD +C+        R  G +P+  +    N  + +L +  +V  AL    +M     +P+
Sbjct: 142 TDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPD 201

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           V T N+++ A CK     +A+E+   M + G  P+  TYN L+ G C +G +  A++   
Sbjct: 202 VVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLR 261

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            +  +G +P+ + +NT++ G C   +  +A+ + +EM   N  PN  T+N +I    + G
Sbjct: 262 NLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKG 321

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             +    L E+M ++G   +I+TYNA+I GLC++     A  L+  +      P+  TY+
Sbjct: 322 LLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYN 381

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            L+ G C       A +L  +M ++GC P+   F  L+   CQ      A EV  +M +K
Sbjct: 382 TLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 441

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              P+SI  S + SGL    K + A++LF +M  +G  P
Sbjct: 442 GCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNP 480



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 1/325 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  S + ++ + K     +++ +A +   +M      P   + N  + SL     +  A+
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M ++  + N+ T N +++  C+   ++ A+ +   M+S G  P + TYNTL+ G 
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+      A +  + M +NG  P+ +TFNTLI   C+KG + +A  +F +M     +PN 
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 447

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TY+T+I+G  +    +    L+ EM   G   D + Y  L   L  +   ++A   V+ 
Sbjct: 448 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 506

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L  + + P+   Y+A++ G C    +E A  +   M+ SGC P+   + +L+        
Sbjct: 507 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 566

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSE 513
            + A E+L+++  + +  +S+I SE
Sbjct: 567 LNEARELLIKLCSRDVLVNSLIKSE 591



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 116/254 (45%), Gaps = 6/254 (2%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
             + +ES    P     N L+   C +G    A   + ++   G    V+ +  L  G+C
Sbjct: 90  ALRLVESSPRPPDAALANRLVRDLCRRGRPDDA---ERVVGACGPAATVVAYGALTDGYC 146

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           + G+L +A R+   M    V PN  TYN LI+   + G      S+ ++ML  G   D++
Sbjct: 147 RAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVV 203

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN L+   CK    ++A  L+  +      PN  TY+ L+ G C   + + A +L +++
Sbjct: 204 TYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 263

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              GC+P+   +  ++   C  E +  A E++ EML +   P+    + +   L   G  
Sbjct: 264 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 323

Query: 525 ELAMKLFRKMEIRG 538
           + A++L  KM   G
Sbjct: 324 QQAIQLLEKMSKHG 337



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 5/205 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L+G+  +  +    +L D++  +   C    + F+ L      +    +A + F QM 
Sbjct: 382 TLLKGLCSAAQWVDAEELMDNM--TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN-VYTLNMVMHAFCKLGII 279
           D G  P   + +  +S L  + ++D AL  + EM     +P+ +Y L  +         I
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQL--LAECLNDDDTI 497

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A++  + ++  G  P    YN ++ G C  G    A+     M  +G  P+ +T+  L
Sbjct: 498 EEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 557

Query: 340 IFGFCKKGKLHEANRIFSEMKATNV 364
           I G   +G L+EA  +  ++ + +V
Sbjct: 558 IEGLAYEGYLNEARELLIKLCSRDV 582


>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
          Length = 612

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 187/424 (44%), Gaps = 39/424 (9%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           H P+S    +H ++ H L+          + R  L  DS   P +L   ++ +    D +
Sbjct: 121 HTPASFLSMSHLLIAHRLSHLALPLLRLLVSR--LGRDS---PPRLLPLLVSAASTDDPA 175

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI------ 246
           PLV   + K YA                D G LP  + C+  L +L    RV +      
Sbjct: 176 PLV-SAVAKVYA----------------DEGLLP--DGCSLLLLALRRGIRVPMPAWSDL 216

Query: 247 ---------ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
                    A  FY  +    + P     NM+M    + G +  A  VF  M   G  P+
Sbjct: 217 MNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPT 276

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           V T+NTL+SG C    L+ A   + LM K GI P+V T+   I G CK G++ +A  +F 
Sbjct: 277 VVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFE 336

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    ++PN V   TLI+ + + G+   G  L  EM   G+K D++ YNAL+ G C+  
Sbjct: 337 EMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVR 396

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             K A  +V+++ K+ L P+  TY+ LI G C     + A ++ + M   G   +   + 
Sbjct: 397 DMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYT 456

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+S   +      A  +L EM+E  + PD+   + +       G  +   K  ++M+ +
Sbjct: 457 ALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNK 516

Query: 538 GLLP 541
           G  P
Sbjct: 517 GKNP 520



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 2/326 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L +      K  +A + F +M   G  P + + N  +S +  +  ++ A      M 
Sbjct: 245 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 304

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  I+P+VYT    +   CK G I+ A+E+F+ M   G  P+     TLI  HC +G ++
Sbjct: 305 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVT 364

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             ++ +  M   G++ +++ +N L+ GFC+   +  AN I  EM+   + P+ VTY TLI
Sbjct: 365 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 424

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +    + +EM   G+ +D +TY ALI GL K G++  A  ++ ++ +  L 
Sbjct: 425 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 484

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ +I   C   + +  F+  K M   G  P    + ++M+ FC       A  +
Sbjct: 485 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 544

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC 521
           L  ML   + P+ I  + L  G  HC
Sbjct: 545 LNAMLNIGVCPNDITYNILLDG--HC 568



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 171/385 (44%), Gaps = 6/385 (1%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE--S 161
           L P     +LL +++   + +  ++ +    PS    E ++  LH+L      ++ +   
Sbjct: 190 LLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS--VPEAYAFYLHLLDAGVPPEARQFNM 247

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++R ++ S        +FD +L   R    + + F+ L           NA      M  
Sbjct: 248 LMRDMIRSGKLASARNVFDEMLR--RGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAK 305

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + +   F+  L  + R+  A+  ++EM    ++PN   L  ++ A CK G +  
Sbjct: 306 AGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTA 365

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            +E+   M + G    +  YN L++G C    +  A      M K+G++P+ +T+ TLI 
Sbjct: 366 GLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLID 425

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK+G+L  A  +  EM    V+ + VTY  LI+G  + G S     +  EM+  G++ 
Sbjct: 426 GCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQP 485

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  TY  +I   CK G  K     +K++      P   TY+ ++ G C     + A  L 
Sbjct: 486 DNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLL 545

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQN 486
            +M+  G  PN   + +L+   C++
Sbjct: 546 NAMLNIGVCPNDITYNILLDGHCKH 570



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/230 (23%), Positives = 96/230 (41%), Gaps = 9/230 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +   +  + A D   +MR  G  P   +    +        +D A+   +E
Sbjct: 383 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 442

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++ +  T   ++    K G    A  +   M   G  P  TTY  +I   C  G 
Sbjct: 443 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 502

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +    K    M+  G  P ++T+N ++ GFC  G++  A+ + + M    V PN +TYN 
Sbjct: 503 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 562

Query: 374 LING---YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           L++G   +G+V ++E      E     G+  D   Y +LI    K+   K
Sbjct: 563 LLDGHCKHGKVRDTE------ELKSAKGMVSDFGVYTSLINEFVKKKSAK 606


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 156/309 (50%), Gaps = 2/309 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L  +  V  A+G  +EM R  +SP++ + N +++  CK   ++ AV +   ME+
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  T  TL+ G C  G +  AM+    M+K G   +V+ + TLI GFC  G L  
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              +F EM    +S NVVTY+ L++G  ++G  +   ++   M  +GI  D++TY  LI 
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK+G+   A  L+  + +    P+  TY+ L++G C       AF++ + MI  G + 
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEML--EKCMAPDSIILSELYSGLHHCGKDELAMK 529
           +   +  LM   C     D A ++   M   E C+ P+    + L  GL   G+   A+K
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 530 LFRKMEIRG 538
           + RKM  +G
Sbjct: 302 IHRKMVKKG 310



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 11/339 (3%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I S N  ++ L  ++++  A+G   EM      PN  T   +M   CK G ++ A+E+
Sbjct: 31  PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 90

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            + M+  GF   V  Y TLISG CN G L    +  + M   GI  NV+T++ L+ G C+
Sbjct: 91  LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 150

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+  EAN + + M    + P+VVTY  LI+G  + G +     L   M+  G +   +T
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN L+ GLCKEG    A  +++ + +     +  TY+ L+ G C +   + A +L+ SM 
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 466 -RSGC-RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
               C  PN   F ML+   C+     +A ++  +M++K    + +  + L  G    GK
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 524 DELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
            + AM+L++++   G +P          GF K+R +N A
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 161/352 (45%), Gaps = 2/352 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L       KK + A     +M   G  P   +C   +  L    R+D A+   + M+
Sbjct: 36  YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMK 95

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +     +V     ++  FC  G ++R  E+F  M   G   +V TY+ L+ G C  G   
Sbjct: 96  KKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWK 155

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N M ++GI P+V+T+  LI G CK G+   A  + + M      P+ VTYN L+
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLL 215

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL--DKNS 433
           +G  + G       +   M+  G K D++TYN L+ GLC +GK  +A  L   +  ++N 
Sbjct: 216 SGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENC 275

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  T++ LI G C      +A ++++ M++ G   N   + ML+    +      A 
Sbjct: 276 LEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAM 335

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           E+  ++L+    P+S   S L  G        +A  LF +M   GL P  FD
Sbjct: 336 ELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 387



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 141/269 (52%)

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           +N+V+   C+ G +  A+ + + M      P + +YNTLI+G C    L  A+     ME
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G  PN +T  TL+ G CK G++ EA  +   MK      +VV Y TLI+G+   GN +
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            G  L++EML  GI  +++TY+ L+ GLC+ G+ K+A  ++  + ++ + P+  TY+ LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C    +  A  L   M+  G  P+   + +L+S  C+      A ++L  M+EK   
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKM 534
            D +  + L  GL   GK + A+KLF  M
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSM 269



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 180/383 (46%), Gaps = 4/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G  ++ + D   +LFD +L   +   ++ + +  L        +++ A      M 
Sbjct: 108 TLISGFCNNGNLDRGKELFDEMLG--KGISANVVTYSCLVHGLCRLGQWKEANTVLNAMA 165

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++G  P + +    +  L    R   A+     M      P+  T N+++   CK G++ 
Sbjct: 166 EHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVI 225

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM--EKNGIQPNVITFNT 338
            A ++ + M   G    V TYNTL+ G C+KG +  A+K  N M   +N ++PNV TFN 
Sbjct: 226 DAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNM 285

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G+L +A +I  +M       N+VTYN L+ G  + G  +    L++++L  G
Sbjct: 286 LIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              +  TY+ LI G CK      A  L  ++  + L P    Y+ L+   C   + E+A 
Sbjct: 346 FVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAK 405

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L++ M  + C P+   F  ++    +  DF    E+ ++M+E  + PD++  S L + L
Sbjct: 406 SLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRL 465

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ + A     +M   G  P
Sbjct: 466 SKLGELDEAKSALERMVASGFTP 488



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 154/320 (48%), Gaps = 9/320 (2%)

Query: 248 LGFYKE-------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           LG +KE       M  + I P+V T   ++   CK G    A+++   M   G  PS  T
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM- 359
           YN L+SG C +GL+  A K   +M + G + +V+T+NTL+ G C KGK+ EA ++F+ M 
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 270

Query: 360 -KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
                + PNV T+N LI G  + G       ++ +M++ G   +++TYN L+ G  K GK
Sbjct: 271 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGK 330

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            K+A  L K +     VPN+ TYS LI G C  +    A  L+  M   G  P    +  
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           LM++ C+    ++A  +  EM      PD I  + +  G    G  +   +L  KM   G
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450

Query: 539 LLPKGFDKLRTINCAPENGE 558
           L P        IN   + GE
Sbjct: 451 LRPDALTFSTLINRLSKLGE 470



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 206/455 (45%), Gaps = 39/455 (8%)

Query: 84  IAYSHLIHS-----DWKK----LTALSTH-LTPFRVKHVLL--KVQKD----YVLSLEFF 127
           + YS L+H       WK+    L A++ H + P  V +  L   + KD    + + L   
Sbjct: 139 VTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNL 198

Query: 128 TWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYR 187
              +  +PS++T   ++++L  L K      +  ILR +++        K  D + Y   
Sbjct: 199 MVEKGEEPSNVT---YNVLLSGLCKEGLVIDAFKILRMMIEK------GKKADVVTY--- 246

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVD 245
                    + L K    + K   A   F  M D      P + + N  +  L    R+ 
Sbjct: 247 ---------NTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLT 297

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+  +++M +     N+ T NM++    K G I+ A+E++K +  +GF+P+  TY+ LI
Sbjct: 298 KAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 357

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C   +L++A      M  +G+ P +  +NTL+   CK+G L +A  +F EM   N  
Sbjct: 358 DGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCE 417

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+++++NT+I+G  + G+ +    L  +M+  G++ D LT++ LI  L K G+  +A   
Sbjct: 418 PDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSA 477

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++ +  +   P+A  Y +L+ G   + ++     L   M   G   ++ I   +++  C 
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCH 537

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +       E+L    +      SI  +EL   LH 
Sbjct: 538 SIQEVDVMELLPTFFQGTSEGASISCNELLMQLHQ 572



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 98/206 (47%)

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            N ++ G C+ G + EA  +  EM   +VSP++V+YNTLING  +    +    L  EM 
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G   + +T   L+ GLCK+G+  +A  L++ + K     +   Y  LI+G C   N +
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           R  +L+  M+  G   N   +  L+   C+   +  A  VL  M E  + PD +  + L 
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL   G+   AM L   M  +G  P
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEP 206


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 192/387 (49%), Gaps = 18/387 (4%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           SD+  L  K+ +     YR      + ++ +  +    ++  +A D F ++   G  P +
Sbjct: 172 SDAVSLVDKMVE---IGYR---PDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNV 225

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            +    ++ L +S R + A    ++M + +I+PNV T + ++ AF K G +  A E+F+ 
Sbjct: 226 VTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEE 285

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M  M   P + TY++LI+G C    +  A +  +LM   G  P+V+++NTLI GFCK  +
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKR 345

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +  ++F +M    +  N VTYNTLI G+ QVG+ +     + +M   G+  DI TYN 
Sbjct: 346 VEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNI 405

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GLC  G  +KA  + +D+ K+ +  +  TY+ +I G C     E A+ L+ S+   G
Sbjct: 406 LLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKG 465

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML--EKCMAPDSII-LSELYSGLHHCGKDE 525
            +P+   +  +MS  C  +      E L   +  E  M  DS++ L +        G   
Sbjct: 466 LKPDIVTYTTMMSGLC-TKGLQHEVEALYTKMKQEGLMKNDSMLCLGD--------GDIT 516

Query: 526 LAMKLFRKMEIRGLLPKGFDKLRTINC 552
           ++ +L +KM   G  P     ++ + C
Sbjct: 517 ISAELIKKMLSCGYAPSLLGDIKPVGC 543



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 178/343 (51%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L KT     K  +A + F +M      P I   N+ LS+++  ++ D+ +   K+M    
Sbjct: 56  LSKTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLG 115

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I  ++YT N+V++ FC    +  A+ V   M  +G+ P   T  +L++G C +  +S A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+++ +N +I   CK  ++++A   F E+    + PNVVTY  L+NG 
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G     A L  +M++  I  +++TY+AL+    K GK  +A  + +++ + S+ P+ 
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS+LI G C+    + A Q++  M+  GC P+   +  L++ FC+ +  +   ++  +
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M ++ +  +++  + L  G    G  + A + F +M+  G+ P
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSP 398



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 167/342 (48%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   +  R +  +A     +M + G+ P I + N  + SL  + RV+ AL F+KE+ R  
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKG 220

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I PNV T   +++  C  G    A  + ++M      P+V TY+ L+      G +  A 
Sbjct: 221 IRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAK 280

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M +  I P+++T+++LI G C   ++ EAN++F  M +    P+VV+YNTLING+
Sbjct: 281 EIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGF 340

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +    E G  L+ +M + G+  + +TYN LI G  + G   KA      +D   + P+ 
Sbjct: 341 CKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDI 400

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ L+ G C     E+A  +++ M +S    +   +  ++   C+    + A  +   
Sbjct: 401 WTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCS 460

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +  K + PD +  + + SGL   G       L+ KM+  GL+
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLM 502



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 159/330 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A     +M   G+ P   +    ++      RV  A+    +M      P++   N ++ 
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIID 198

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           + CK   +  A++ FK +   G  P+V TY  L++G CN G  + A +    M K  I P
Sbjct: 199 SLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITP 258

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NVIT++ L+  F K GK+ EA  IF EM   ++ P++VTY++LING       +    ++
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           + M+  G   D+++YN LI G CK  + +    L + + +  LV N  TY+ LI G    
Sbjct: 319 DLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQV 378

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            + ++A + +  M   G  P+   + +L+   C N   ++A  +  +M +  M  D +  
Sbjct: 379 GDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTY 438

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  G+   GK E A  LF  + ++GL P
Sbjct: 439 TTVIQGMCKTGKVEDAWGLFCSLSLKGLKP 468



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 138/279 (49%), Gaps = 2/279 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+ +S  ++  ++L   ++   R    + + +  L   +    K   A + F +M 
Sbjct: 230 ALVNGLCNSGRWNDAARLLRDMIK--RKITPNVITYSALLDAFVKNGKVLEAKEIFEEMV 287

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P I + +  ++ L   +R+D A   +  M      P+V + N +++ FCK   +E
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVE 347

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +++F+ M   G + +  TYNTLI G    G +  A +F + M+  G+ P++ T+N L+
Sbjct: 348 DGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILL 407

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  G L +A  IF +M+ + +  ++VTY T+I G  + G  E    L+  +   G+K
Sbjct: 408 GGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLK 467

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            DI+TY  ++ GLC +G   +   L   + +  L+ N S
Sbjct: 468 PDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKNDS 506


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 220/478 (46%), Gaps = 72/478 (15%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL--TLETHSIVLHILTKNRKFKSSES 161
           +TP  V+  L++ ++D   +L  F        +     L T S+++  L    +F+ +E+
Sbjct: 42  VTPTHVQQ-LIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAET 100

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L   +  +  D+   +  SI                  + Y    K  ++   F +M+D
Sbjct: 101 LLDR-MKEEKIDVTEDILLSIC-----------------RAYGRIHKPLDSIRVFHKMQD 142

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIE 280
           +   P  +S    L+ L++  ++  A  FY++MR+  I P V +LN+++ AFCK  G ++
Sbjct: 143 FHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMD 202

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+ +F+ M + G  P   TY TLI+G C    +  A +    ME  G  P+V+T+ ++I
Sbjct: 203 KAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSII 262

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C+   + EA R+  +MK  N+ PNV TY++L++G+ + G+S     + E M++  ++
Sbjct: 263 HGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLR 322

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS--------------------- 439
            ++++Y+ L+ GLC EGK  +A  +   +      P+A                      
Sbjct: 323 PNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANF 382

Query: 440 ---------------------TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
                                T++ +I G C   NS RAFQLY S++  G       F  
Sbjct: 383 LDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNS 442

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL----AMKLFR 532
           L+  FC  +D  + + +L EM+     P      E++S + +C  DE     AMKL +
Sbjct: 443 LLKCFCNKKDLPKTSRILDEMVINGCIPQ----GEMWSTMVNCFCDERKACDAMKLLQ 496


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 174/334 (52%), Gaps = 2/334 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KLF+ +    + C    + +++L K +    +   A     ++  YG  P + S N  L 
Sbjct: 237 KLFNEM--RNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILR 294

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           SL    R   A+     M R    P+V T N++++  C+ G++ +A+ V + M   G  P
Sbjct: 295 SLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTP 354

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  ++N LI G CN   +  A+++  +M   G  P+++T+N L+   CK GK+ +A  I 
Sbjct: 355 NSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 414

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           S++ +   SP++++YNT+I+G  +VG +E+   L EEM   G+K D++T  +++ GL +E
Sbjct: 415 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 474

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           GK ++A      L + ++ PNA  Y+++ITG C  + +  A      M+  GC+P +  +
Sbjct: 475 GKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATY 534

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             L+         + A+++  E+  + +   S++
Sbjct: 535 TTLIKGITYEGLAEDASKLSNELYSRGLVKRSLV 568



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 173/343 (50%), Gaps = 3/343 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L + +    + +NA+     + + G +  + S N  +S    S  ++ AL   + + R  
Sbjct: 120 LIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEAL---RVLDRMG 176

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +SPN  T + V+ + C  G +++A++V          P V T   LI   C +  +  AM
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  N M   G +P+V+T+N LI GFCK G+L EA R   ++ +    P+V+++N ++   
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G       L   MLR G    ++T+N LI  LC++G   KA  +++ + K+   PN+
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +++ LI G C  K  +RA +  + M+  GC P+   + +L++  C++   D A  +L +
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  K  +P  I  + +  GL   GK ELA++L  +M  +GL P
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKP 459



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 150/313 (47%), Gaps = 3/313 (0%)

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           ES  + L  L+ +  ++    F + M     SP+V     ++  FCK+G  + A ++   
Sbjct: 80  ESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGI 139

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +E  G +  VT+YN LISG+C  G +  A++   ++++ G+ PN  T++ ++   C +GK
Sbjct: 140 LEESGAVIDVTSYNVLISGYCKSGEIEEALR---VLDRMGVSPNAATYDAVLCSLCDRGK 196

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L +A ++      +   P+VVT   LI+   +         L+ EM   G K D++TYN 
Sbjct: 197 LKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNV 256

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G CK G+  +A   +K L      P+  +++ ++   C       A +L  +M+R G
Sbjct: 257 LIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C P+   F +L++  CQ     +A  VL  M +    P+S   + L  G  +    + A+
Sbjct: 317 CLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAI 376

Query: 529 KLFRKMEIRGLLP 541
           +    M  RG  P
Sbjct: 377 EYLEIMVSRGCYP 389



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 99/217 (45%), Gaps = 5/217 (2%)

Query: 146 VLHILTKNRKFKSSES---ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKT 202
           VL ++ K+    +S S   +++G  +    D   +  + I+ S R C    + +++L   
Sbjct: 343 VLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLE-IMVS-RGCYPDIVTYNILLTA 400

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
                K  +A     Q+   G  P + S N  +  LL   + ++A+   +EM    + P+
Sbjct: 401 LCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPD 460

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           + T   V+    + G +  A++ F  ++     P+   YN++I+G C     SLA+ F  
Sbjct: 461 LITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLA 520

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            M   G +P   T+ TLI G   +G   +A+++ +E+
Sbjct: 521 DMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNEL 557



 Score = 55.5 bits (132), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 18/188 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I+L  L K+ K   +  IL          L SK     L SY        V D L K
Sbjct: 393 TYNILLTALCKDGKVDDAVVILS--------QLSSKGCSPSLISYNT------VIDGLLK 438

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K   A +   +M   G  P + +C   +  L    +V  A+ F+  ++R  I P
Sbjct: 439 V----GKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRP 494

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +  N ++   CK      A++   +M + G  P+  TY TLI G   +GL   A K  
Sbjct: 495 NAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLS 554

Query: 322 NLMEKNGI 329
           N +   G+
Sbjct: 555 NELYSRGL 562


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 232/513 (45%), Gaps = 43/513 (8%)

Query: 44  NPTFVNPSVS-------ENSMKMNRNPIPIPHR----------TLPEP--KGQDLDFVNI 84
           +P F+NP+VS         +   NR      HR          +L +P  +G +LD V  
Sbjct: 63  SPKFINPNVSIRPRTRISKARDPNRGKPWASHRLSTLGQQVLDSLIDPCFEGSELDKVLS 122

Query: 85  AYSHLIHSDWKKLTALSTHLTPFRVKHVL--LKVQKDYVLSLEFFTWVQTHK--PSSLTL 140
                 H +   L++ + +     V  ++  L   K   +++  F+WV+  +   S L  
Sbjct: 123 QLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCDMAMSVFSWVREREDFESVLNC 182

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-------------- 186
              ++++ +L K  K  ++ SIL   L  D FDL    + S++ +Y              
Sbjct: 183 SVVAVIITMLGKEGKVSAASSILNN-LRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFK 241

Query: 187 ----RMCDSSPLVFDLLFKTYAHRK-KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
                 C  + + ++++   Y      +   +     M+  G  P   + N  +S     
Sbjct: 242 KMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRG 301

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
              + A   ++EM+ +  SP+  T N ++  + K    + A+EV K ME  GF PS+ TY
Sbjct: 302 SLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTY 361

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N+LIS +   GLL  AM+ K+ M + GI+P+V T+ TL+ GF K G    A RIF EM+A
Sbjct: 362 NSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA 421

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               PN+ T+N LI  +G  G       ++EE+       DI+T+N L+    + G   +
Sbjct: 422 AGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSE 481

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
            + + K++ +   VP   T++ LI+      + ++A  +YK M+ +G  P+   +  +++
Sbjct: 482 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLA 541

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
              +   ++++ +V  EM +    P+ +    L
Sbjct: 542 ALARGGLWEQSEKVFAEMKDGRCKPNELTYCSL 574



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 162/338 (47%), Gaps = 8/338 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L   Y   ++ + A +   +M   GF P I + N  +S+      +  A+    +
Sbjct: 324 VTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQ 383

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+V+T   ++  F K G+ E A+ +F  M + G  P++ T+N LI  H N+G 
Sbjct: 384 MVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGR 443

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            +  MK    +E     P+++T+NTL+  F + G   E + +F EMK     P   T+NT
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 503

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ Y + G+ +   ++Y+ ML  G+  D+ +YNA++  L + G  +++  +  ++    
Sbjct: 504 LISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR 563

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE--MLMSTFCQNEDFDR 491
             PN  TY +L+      K  ER   L + +      P   + +  +L+++ C   D   
Sbjct: 564 CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKC---DLLM 620

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
             E   E L+K  +PD   LS L + +   G+ ++  K
Sbjct: 621 ETEHAFEELKKKGSPD---LSTLNAMIAIYGRRQMVAK 655



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 172/350 (49%), Gaps = 8/350 (2%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN--KFLSSLLDSE-RVDIALGFYKEMR 255
           + K     KK   A   F  +R+      + +C+    + ++L  E +V  A      +R
Sbjct: 150 IIKGLGFYKKCDMAMSVFSWVREREDFESVLNCSVVAVIITMLGKEGKVSAASSILNNLR 209

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL-L 314
           ++    +VY    ++ A+   G    AV VFK ME  G  P++ TYN +++ +   G+  
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE-ANRIFSEMKATNVSPNVVTYNT 373
           S      + M+ +G+ P+  T+NTLI   C++G L+E A ++F EMK +  SP+ VT+NT
Sbjct: 270 SKISGLVHGMKSSGVAPDDYTYNTLI-SCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNT 328

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++ YG+    +    + +EM  +G    I+TYN+LI    ++G  ++A  L   + +  
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ L++G       E A +++  M  +GC+PN   F  L+        F    
Sbjct: 389 IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMM 448

Query: 494 EVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +V  E +E C  APD +  + L +     G D     +F++M+  G +P+
Sbjct: 449 KV-FEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 497



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 157/330 (47%), Gaps = 1/330 (0%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +MR  G  P I + N  +    +  R    +  ++E+     +P++ T N ++ 
Sbjct: 412 AMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLA 471

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            F + G+      VFK M+  GF+P   T+NTLIS +   G    AM     M + G+ P
Sbjct: 472 VFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTP 531

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           ++ ++N ++    + G   ++ ++F+EMK     PN +TY +L++ Y      E   +L 
Sbjct: 532 DLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLA 591

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EE+     +   +    L+L   K     +  +  ++L K    P+ ST +A+I     R
Sbjct: 592 EEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRR 650

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           +   +A ++   M  SG  P+   +  LM    ++E+F+R+ EVL E+L K + PD I  
Sbjct: 651 QMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISY 710

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +       G+ + A ++F  M+  GL+P
Sbjct: 711 NTVIFAYCRNGRMKDASRIFSYMKTYGLVP 740



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/357 (22%), Positives = 164/357 (45%), Gaps = 43/357 (12%)

Query: 177 KLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
           K+F+ I     +C+ +P  + ++ L   +         +  F +M+  GF+P  ++ N  
Sbjct: 449 KVFEEI----EICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTL 504

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +S+         A+  YK M    ++P++ + N V+ A  + G+ E++ +VF  M+    
Sbjct: 505 ISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRC 564

Query: 295 IPSVTTYNTLISGHCN--------------------------KGLLSLAMKFKNLME--- 325
            P+  TY +L+  + N                          K L+ +  K   LME   
Sbjct: 565 KPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEH 624

Query: 326 -----KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
                K    P++ T N +I  + ++  + +AN I + M  +  SP++ TYN+L+  + +
Sbjct: 625 AFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSR 684

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             N E    + +E+L  G+K D+++YN +I   C+ G+ K A+ +   +    LVP+  T
Sbjct: 685 SENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVIT 744

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           Y+  +         E A  + + MI+ GC+ N++ +  ++  +C++    R A+ ++
Sbjct: 745 YNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKH---SRRADAIM 798



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 107/189 (56%), Gaps = 3/189 (1%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++E+++ + SP++ TLN ++  + +  ++ +A E+   M   GF PS+ TYN+L+  H  
Sbjct: 626 FEELKK-KGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSR 684

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                 + +    +   G++P++I++NT+IF +C+ G++ +A+RIFS MK   + P+V+T
Sbjct: 685 SENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVIT 744

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNT +  Y      E    +   M+++G K +  TYN+++ G CK  +   A   V  L 
Sbjct: 745 YNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIVDGYCKHSRRADAIMFVSSL- 803

Query: 431 KNSLVPNAS 439
            N L P+ +
Sbjct: 804 -NQLDPHVT 811


>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 207/441 (46%), Gaps = 57/441 (12%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESI 162
           L+P RV  ++ + Q++  L+L+ F    + H+  +   ET+  ++  L+K R F+  E++
Sbjct: 99  LSPKRVVSMISR-QQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKARAFEPMETL 157

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           +   L          LF +++ +Y                +A R K   A  TF ++  +
Sbjct: 158 ISQ-LHKSQIKCGENLFITVIRNY---------------GFAGRPKL--AIRTFLRIPSF 199

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIER 281
           G  P + S N  L++L+ ++R D+    +K  R+   I PNV+T N+++ A CK   I+ 
Sbjct: 200 GLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDA 259

Query: 282 AVEVFKNMESMGFIPSVTTYNT-----------------------------------LIS 306
           A+ V + M +MGFIP+V TY T                                   L+ 
Sbjct: 260 AIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMD 319

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C KG    A+K  + ME+N ++PN +T+  +I  +CK+ K  E   +  +M      P
Sbjct: 320 GYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIP 379

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +      +I+   + G  E+   L++++L+     D    + LI  LCKEGK  +A  L 
Sbjct: 380 SSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWEARKLF 439

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            + +K S +P+  TY+ALI G C       A +L+ +M+  GC PN   + ML+  FC+ 
Sbjct: 440 DEFEKGS-IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKV 498

Query: 487 EDFDRAAEVLLEMLEKCMAPD 507
            +      V+ EML+    P+
Sbjct: 499 GNAREGIRVMEEMLDNGCLPN 519



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 2/278 (0%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           A+  F  + S G  PSV ++NTL++    NK    + + FKN  +K GI PNV T N L+
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILV 248

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CKK  +  A R+  EM A    PNVVTY T++ GY   G+      ++ E+L  G  
Sbjct: 249 KALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWV 308

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY  L+ G CK+G+   A  ++ ++++N + PN  TY  +I   C  K S     L
Sbjct: 309 PDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNL 368

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M+     P+  +   ++   C+    + A E+  ++L+K   PD+ I S L   L  
Sbjct: 369 LDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCK 428

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
            GK   A KLF + E +G +P        I    E GE
Sbjct: 429 EGKVWEARKLFDEFE-KGSIPSTLTYNALIAGMCEGGE 465



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 105/228 (46%), Gaps = 5/228 (2%)

Query: 336 FNTLI--FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           F T+I  +GF  + KL  A R F  + +  + P+V ++NTL+N   Q    ++   +++ 
Sbjct: 173 FITVIRNYGFAGRPKL--AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKN 230

Query: 394 MLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
             +  GI  ++ T N L+  LCK+     A  +++++     +PN  TY+ ++ G   + 
Sbjct: 231 CRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKG 290

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           +   A +++  ++  G  P+   + +LM  +C+   F  A +V+ EM E  + P+ +   
Sbjct: 291 DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            +        K    + L   M  +  +P      R I+   E G+ E
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVE 398


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 169/325 (52%), Gaps = 6/325 (1%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R  G  P + S    ++        D A   Y EM   RISP+V T + ++ A CK   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++A+EV   M   G +P+  TYN+++ G+C+      A+ F   M  +G++P+V+T+N+L
Sbjct: 248 DKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSL 307

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   CK G+  EA +IF  M    + P++ TY TL+ GY   G      +L + M+RNGI
Sbjct: 308 MDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGI 367

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D   +N LI    K+ K  +A  +   + ++ L PN  TY A+I   C   + + A  
Sbjct: 368 HPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAML 427

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            ++ MI  G  PN  ++  L+ + C  + +D+A E++LEML++ +  ++I  + +   +H
Sbjct: 428 YFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI---IH 484

Query: 520 -HC--GKDELAMKLFRKMEIRGLLP 541
            HC  G+   + KLF  M   G+ P
Sbjct: 485 SHCKEGRVIESEKLFDLMVRIGVKP 509



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 164/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     SE+   A+GF K+MR + + P+V T N +M 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P + TY TL+ G+  KG L       +LM +NGI P
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN LI  + K+ K+ EA  +FS+M+   ++PNVVTY  +I    + G+ +     +
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+  +I+ Y +LI  LC   K  KA  L+ ++    +  N   ++++I   C  
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +PN   +  L+  +C     D A ++L  M    M PD +  
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + + A+ LF++M   G+ P
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 177/344 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   YA ++K   A   F +MR +G  P + +    +  L  S  VD A+ ++++M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++PN+     ++H+ C     ++A E+   M   G   +   +N++I  HC +G +
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++PNVIT++TLI G+C  GK+ EA ++ S M +  + P+ VTYNTL
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY +V   +   +L++EM+ +G+  +I+TYN ++ GL    +T  A  L   + K+  
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           + +      + P+      +   +   G  E   +LF  ME  G
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNG 716



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 170/365 (46%), Gaps = 2/365 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FDS+  + R  +     +  L + YA +            M   G  P     N  + 
Sbjct: 322 KIFDSM--TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +    E+VD A+  + +MR++ ++PNV T   V+   CK G ++ A+  F+ M   G  P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  Y +LI   C       A +    M   GI  N I FN++I   CK+G++ E+ ++F
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    V PNV+TY+TLI+GY   G  +    L   M   G+K D +TYN LI G C+ 
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRV 559

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +   A  L K++  + + PN  TY+ ++ G    + +  A +LY  + +SG +     +
Sbjct: 560 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +++   C+N   D A  +   +    +  ++   + +   L   G+++ A  LF     
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSS 679

Query: 537 RGLLP 541
            GL+P
Sbjct: 680 NGLVP 684



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 10/330 (3%)

Query: 180 DSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           D++LY  +M D   +P  +V+  L  +     K+  A +   +M D G        N  +
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            S     RV  +   +  M R  + PNV T + ++  +C  G ++ A ++  +M S+G  
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   TYNTLI+G+C    +  A+     M  +G+ PN+IT+N ++ G     +   A  +
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +  +  +     + TYN +++G  +   ++    +++ +    ++++  T+N +I  L K
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            G+  +A  L      N LVPN  TY  +   I GQ +    E   QL+ SM  +GC  +
Sbjct: 664 VGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFFSMEDNGCTVD 720

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             +   ++    Q  +  RA   L  + EK
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMIDEK 750



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P+V TY  LI 
Sbjct: 38  FDELLRRGR-GASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYGILIG 95

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G +   ITF  L+ G C   +  +A              
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +    +P+VV+Y T+ING+ + G+S+  
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML   I  D++TY+++I  LCK     KA  ++  + KN ++PN  TY++++ G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C  +  + A    K M   G  P+   +  LM   C+N     A ++   M ++ + PD
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 336 IATYCTLLQG 345



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 138/324 (42%), Gaps = 23/324 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
            ++ ++H L    K+  +E ++  +LD     L +  F+SI++S+    R+ +S  L FD
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFNSIIHSHCKEGRVIESEKL-FD 500

Query: 198 LLFKT---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+ +                Y    K   AT     M   G  P   + N  ++      
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+D AL  +KEM  + +SPN+ T N+++           A E++  +   G    ++TYN
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            ++ G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F    +
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSS 679

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + PN  TY  +       G  E    L+  M  NG  VD    N ++  L + G+  +
Sbjct: 680 NGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITR 739

Query: 422 AAYLVKDLDKNSLVPNASTYSALI 445
           A   +  +D+      AST S  I
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFI 763



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           NR+ +   A  V+P V TY  LI    + G  ++G +    +++ G +V+ +T+  L+ G
Sbjct: 73  NRM-ARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKG 131

Query: 413 LCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR---SG 468
           LC + +T  A  +V + + + S +P+  + + L+ G C    S+ A +L   M      G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   +  +++ F +  D D+A     EML++ ++PD +  S + + L      + AM
Sbjct: 192 SAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAM 251

Query: 529 KLFRKMEIRGLLP 541
           ++   M   G++P
Sbjct: 252 EVLTTMVKNGVMP 264


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 172/331 (51%), Gaps = 7/331 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  L+SL+   R   A+  ++   ++ + SP+V++ N+V+   C++G  ++A+E+ + M 
Sbjct: 183 NYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMT 242

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI-QPNVITFNTLIFGFCKKGKL 349
             G  P   T+N L+ G C    ++   +    ++++G+  PN +T+ ++I G+CK GK+
Sbjct: 243 EFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKM 302

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  ++++M  +   PN VTYN LINGYG+  + E    +Y +++      D++T+++L
Sbjct: 303 EDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSL 362

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSG 468
           I G C+ G+   A  + K++  + + PN  T+S +I   C +  S  A  + + + +R+ 
Sbjct: 363 IDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTD 422

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-- 526
             P   I+  ++   C+    D A  ++ +M EK   PD    + L  G  HC K  +  
Sbjct: 423 IAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIG--HCMKGRIPE 480

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           A+ LF KM   G  P        ++C  + G
Sbjct: 481 AITLFHKMVEAGCRPDNITVNSFVSCVLKAG 511



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/331 (24%), Positives = 165/331 (49%), Gaps = 3/331 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTF-CQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C   P  ++ L  +     + ++A   F   ++D  + P + S N  +  +        A
Sbjct: 175 CCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKA 234

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLIS 306
           L   + M     SP+  T N+++   C+   + +  EV + ++  G  +P+  TY ++IS
Sbjct: 235 LELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVIS 294

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G +  AM   N M ++G +PN +T+N LI G+ K   +  A R++ ++   +  P
Sbjct: 295 GYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPP 354

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVT+++LI+GY + G  +    +++EM  + I+ ++ T++ +I  LCK+ ++ +A  ++
Sbjct: 355 DVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDIL 414

Query: 427 KDLD-KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++L+ +  + P    Y+ +I   C     + A  +   M   GC P+K+ + +L+   C 
Sbjct: 415 RELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCM 474

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
                 A  +  +M+E    PD+I ++   S
Sbjct: 475 KGRIPEAITLFHKMVEAGCRPDNITVNSFVS 505



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 4/266 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C    +  ++L       K+     +   ++ RD   +P   +    +S    + +++ A
Sbjct: 246 CSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDA 305

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  Y +M  +   PN  T N++++ + K   +E AV +++ +      P V T+++LI G
Sbjct: 306 MSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDG 365

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSP 366
           +C  G L  A +    M  + IQPNV TF+ +I   CK+ +  EA  I  E+   T+++P
Sbjct: 366 YCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAP 425

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
               YN +I+   + G  +    +  +M   G   D  TY  LI+G C +G+  +A  L 
Sbjct: 426 QTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 485

Query: 427 KDLDKNSLVPNASTYSALITGQCVRK 452
             + +    P+  T ++ ++  CV K
Sbjct: 486 HKMVEAGCRPDNITVNSFVS--CVLK 509



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 137/301 (45%), Gaps = 42/301 (13%)

Query: 282 AVEVFKNMES--MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNT 338
           A+ +F  + S  +   PS  +Y  +I+  C  G    A+K F  +M+++G  P    F +
Sbjct: 90  ALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEA-GFFS 148

Query: 339 LIFGFC-KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            + G C   G L  A+ + ++            YN L+N     G ++   +L+E  +++
Sbjct: 149 FVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQD 208

Query: 398 GI-KVDILTYNALILGLCKEGKTKKAAYLVKDLDK----------NSLV----------- 435
           G+   D+ ++N +I G+C+ G  +KA  LV+ + +          N LV           
Sbjct: 209 GLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNK 268

Query: 436 ---------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
                          PNA TY+++I+G C     E A  +Y  M+ SG RPN   + +L+
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + + +  D + A  +  +++ +   PD +  S L  G   CG+ + A +++++M +  + 
Sbjct: 329 NGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388

Query: 541 P 541
           P
Sbjct: 389 P 389



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 18/277 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I++  L + ++      +LR  L  D   +P+ +                 +  +  
Sbjct: 252 THNILVDGLCRAKQVNKGHEVLRR-LQRDGVCMPNAV----------------TYTSVIS 294

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K  +A   +  M + G  P   + N  ++    +  ++ A+  Y+++      P
Sbjct: 295 GYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPP 354

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-F 320
           +V T + ++  +C+ G ++ A  ++K M      P+V T++ +I   C +   + A+   
Sbjct: 355 DVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDIL 414

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           + L  +  I P    +N +I   CK GK+ EAN I ++MK     P+  TY  LI G+  
Sbjct: 415 RELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCM 474

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            G      +L+ +M+  G + D +T N+ +  + K G
Sbjct: 475 KGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAG 511



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 1/171 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + F  L   Y    +  +A   + +M  +   P + + +  + SL    R   
Sbjct: 350 RHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAE 409

Query: 247 ALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           AL   +E+  R  I+P  +  N V+   CK G ++ A  +  +M+  G  P   TY  LI
Sbjct: 410 ALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILI 469

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            GHC KG +  A+   + M + G +P+ IT N+ +    K G  +E ++I 
Sbjct: 470 IGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVLKAGMPNEVDQIM 520


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 173/351 (49%), Gaps = 1/351 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S + F LL       K +  A     +M    G  P     N  ++SL   + V      
Sbjct: 74  SVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSV 133

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
              M +  + P+V T  ++++  C  G + RAVE+  ++E  G+   V TY  LI+G C 
Sbjct: 134 LGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCK 193

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G  S A+ +   ME+    PNV+ ++T++ G CK G + EA  +  EM    + PN+VT
Sbjct: 194 MGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVT 253

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI G    G  +   SL +EM++ G+  D+ + N L+  LCKEGK  +A  ++  + 
Sbjct: 254 YTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI 313

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
               VP+  TY++LI   C++   + A ++++ M+  GC P+   +  L+  +C+ ++ +
Sbjct: 314 LVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNIN 373

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A  +L EM++    PD +  + L  G    G+   A +LF  M   G +P
Sbjct: 374 KAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVP 424



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 162/350 (46%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F +L      +     A +    +   G+   +++    ++ L    +   A+G
Sbjct: 143 EPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVG 202

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           + ++M     +PNV   + VM   CK G++  A+ +   M   G  P++ TY  LI G C
Sbjct: 203 WLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLC 262

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N G    A    + M K G+ P++ + N L+   CK+GK+ +A  +   M      P+V 
Sbjct: 263 NFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVF 322

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN+LI+ Y      +    ++E M+  G   DI+ Y +LI G CK     KA +L+ ++
Sbjct: 323 TYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K    P+  T++ LI G C       A +L+ +M + G  PN     +++   C+++  
Sbjct: 383 IKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLL 442

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             A  +   M +  +  + +I S +  G+   GK   A++LF  +  +GL
Sbjct: 443 SEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 153/346 (44%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        K   A     +M +  + P +   +  +  L     V  ALG   EM 
Sbjct: 184 YGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS 243

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I PN+ T   ++   C  G  + A  +   M  MG +P + + N L+   C +G + 
Sbjct: 244 GKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIM 303

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   G  P+V T+N+LI  +C + ++ EA R+F  M +    P++V Y +LI
Sbjct: 304 QAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLI 363

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ ++ N      L +EM++ G   D++T+  LI G C+ G+   A  L  ++ K   V
Sbjct: 364 HGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQV 423

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T + ++ G C  +    A  L+ +M +S    N  I+ +++   C     + A E+
Sbjct: 424 PNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALEL 483

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +  K +  +    + + +G    G  + A  L   ME  G +P
Sbjct: 484 FSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMP 529



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 146/301 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P + +    +  L +  R   A     EM +  + P++ +LN+++   CK G
Sbjct: 241 EMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEG 300

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I +A  V   M  +G +P V TYN+LI  +C +  +  A +   LM   G  P+++ + 
Sbjct: 301 KIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYT 360

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G+CK   +++A  +  EM     +P+VVT+ TLI G+ QVG       L+  M + 
Sbjct: 361 SLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKY 420

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   ++ T   ++ GLCK     +A  L   ++K++L  N   YS ++ G C       A
Sbjct: 421 GQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTA 480

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L+  +   G + N + + ++++ F +    D+A ++L  M E    PDS   +    G
Sbjct: 481 LELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQG 540

Query: 518 L 518
           L
Sbjct: 541 L 541



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/335 (23%), Positives = 148/335 (44%), Gaps = 2/335 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G+ +   +     L D ++    M D   L  ++L        K   A      M  
Sbjct: 257 LIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSL--NILVDVLCKEGKIMQAKSVIGFMIL 314

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G +P + + N  +       ++D A   ++ M      P++     ++H +CK+  I +
Sbjct: 315 VGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINK 374

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +   M  +GF P V T+ TLI G C  G    A +    M K G  PN+ T   ++ 
Sbjct: 375 AMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILD 434

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK   L EA  +F  M+ +N+  N+V Y+ +++G    G       L+  +   G+++
Sbjct: 435 GLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQI 494

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++  Y  +I G  K+G   KA  L+ ++++N  +P++ TY+  + G    +   R+ +  
Sbjct: 495 NVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYL 554

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
             M   G   +    EM+++    N+  +   E L
Sbjct: 555 TMMRDKGFSVDATTTEMIINYLSTNQGDNELREFL 589



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 144/315 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L +   +  +++ A     +M   G +P ++S N  +  L    ++  A      
Sbjct: 252 VTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGF 311

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+V+T N ++  +C    ++ A  VF+ M S G +P +  Y +LI G C    
Sbjct: 312 MILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKN 371

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ AM   + M K G  P+V+T+ TLI GFC+ G+   A  +F  M      PN+ T   
Sbjct: 372 INKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAI 431

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +++G  +        SL+  M ++ + ++I+ Y+ ++ G+C  GK   A  L   L    
Sbjct: 432 ILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKG 491

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L  N   Y+ +I G   +   ++A  L  +M  +GC P+   + + +       +  R+ 
Sbjct: 492 LQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSI 551

Query: 494 EVLLEMLEKCMAPDS 508
           + L  M +K  + D+
Sbjct: 552 KYLTMMRDKGFSVDA 566



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 117/271 (43%), Gaps = 1/271 (0%)

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNV 333
           KL  I+ A+  F  M  M  +PSV  +  L+         + A+   K +    GI+P+ 
Sbjct: 52  KLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDT 111

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
              N +I   C    +     +   M    + P+VVT+  LING    G+      L + 
Sbjct: 112 FILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDH 171

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           + + G + D+ TY  LI GLCK GKT +A   ++ +++ +  PN   YS ++ G C    
Sbjct: 172 VEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGL 231

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A  L   M   G +PN   +  L+   C    +  A  +L EM++  + PD   L+ 
Sbjct: 232 VSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNI 291

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L   L   GK   A  +   M + G +P  F
Sbjct: 292 LVDVLCKEGKIMQAKSVIGFMILVGEVPDVF 322


>gi|326505288|dbj|BAK03031.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326529675|dbj|BAK04784.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 597

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 116/478 (24%), Positives = 218/478 (45%), Gaps = 26/478 (5%)

Query: 67  PHRTLPEPKGQDLDFVNIAY---SHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLS 123
           PH  +  P+      +  +Y   +HL+ +D   L A+   L+P               ++
Sbjct: 3   PHAGVDLPRAICAAVIKCSYRRHAHLLAADPNLLAAVLGRLSPLPS------------VA 50

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           L FF  +    P   +L   ++V  +    R    + ++LR        DL  +   S  
Sbjct: 51  LSFFRALPPPHPLDASL---ALVRLLAAHPRHHPVARTLLR--------DLSLRHPLSSP 99

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                  + P +   L    A   +  +A   F  MR  G  P   +C   L+SL  +  
Sbjct: 100 LLLPSLLAEPHLPSWLLLALAQGGRAGDAVRVFDHMRAEGLAPDAHACTALLTSLARARM 159

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A   +  M R  ++ N +  N ++H   K G   RA  +   M++ G    + ++NT
Sbjct: 160 TATARRVFDGMGRAGVAMNTHVYNAMLHVCLKAGDAARAEALMTRMDATGVPLDLFSFNT 219

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
            I+ +  KG+   AM  ++ M  +G++ +++T+NT+I G CK+G++ EA+++  +M A  
Sbjct: 220 AIALYVRKGMQYEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAG 279

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P+ VTY TL++GY + G+     +L   M   G+   + TYNA+I  LC++GK K+  
Sbjct: 280 IEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVN 339

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+ ++D+  +  +  T + LI     + +   A ++   M+ SG + ++  ++ L+  F
Sbjct: 340 GLLSEMDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGF 399

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +  D A E L EM+    +P+  + S L  G +     +  + +  ++  RGL P
Sbjct: 400 SKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKRGLPP 457



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 137/268 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+     M  + +  ++ T N V+H  CK G ++ A ++ ++M + G  P   TY TL+ 
Sbjct: 233 AMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRDMVAAGIEPDTVTYTTLVD 292

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C  G +  AM  + +ME  G+ P V T+N +I   C+ GK+ E N + SEM    V  
Sbjct: 293 GYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGKMKEVNGLLSEMDERKVQA 352

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VT NTLIN Y + G+      +   M+ +G+++D  TY ALI G  K  +  +A   +
Sbjct: 353 DHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKALIHGFSKAKQLDEAKEAL 412

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++      PN S +S L+ G   R N++    +   +++ G  P+K ++  L+   C+ 
Sbjct: 413 FEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKRGLPPDKSVYRSLIRRLCKK 472

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSEL 514
              D A +VL +M  K +  D ++ + L
Sbjct: 473 RLVDLAQKVLHQMQGKGLEADCLVYASL 500



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/433 (21%), Positives = 182/433 (42%), Gaps = 36/433 (8%)

Query: 136 SSLTLETH--SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           + + + TH  + +LH+  K      +E+++  +   D+  +P  LF              
Sbjct: 173 AGVAMNTHVYNAMLHVCLKAGDAARAEALMTRM---DATGVPLDLFS------------- 216

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             F+     Y  +     A     +M + G    I + N  +  +    R+  A   +++
Sbjct: 217 --FNTAIALYVRKGMQYEAMCVRDRMANDGVEADIVTWNTVIHGMCKEGRMKEASQLHRD 274

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+  T   ++  +C+ G +  A+ +   ME+ G +P V TYN +I   C  G 
Sbjct: 275 MVAAGIEPDTVTYTTLVDGYCRAGDVGEAMNLRAVMEARGMLPGVATYNAIIRKLCEDGK 334

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +       + M++  +Q + +T NTLI  + KKG +  A ++ + M  + +  +  TY  
Sbjct: 335 MKEVNGLLSEMDERKVQADHVTCNTLINSYSKKGDMPSACKVKTRMMESGLQLDQFTYKA 394

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+ +    +       EM+  G   +   ++ L+ G  K         +  +L K  
Sbjct: 395 LIHGFSKAKQLDEAKEALFEMMGAGFSPNYSVFSWLVDGFYKRNNADAVLLIPDELMKRG 454

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+ S Y +LI   C ++  + A ++   M   G   +  ++  L            A+
Sbjct: 455 LPPDKSVYRSLIRRLCKKRLVDLAQKVLHQMQGKGLEADCLVYASLAYAQLTAGKLAAAS 514

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC---GKDELAMKLFRKMEI-RGLLPKGFDK--- 546
           + L +M +K ++    +  ++Y+ L  C   G ++  + +F    I RGL+ K   K   
Sbjct: 515 DTLNDMAKKQLS----VTPQIYNCL--CTSYGDEKQTLNMFWVHAIERGLIGKSVYKLMH 568

Query: 547 ---LRTINCAPEN 556
              L+++N A EN
Sbjct: 569 QARLKSLNPAVEN 581


>gi|356523145|ref|XP_003530202.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 204/439 (46%), Gaps = 23/439 (5%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQ---THKPSSLTLETHSIVLHILTKNRKFKSSE 160
           LTP  +   L+  Q D  LSL+ F       +H P  L    H++ L  L++ R+F   E
Sbjct: 54  LTPHNLAS-LISRQHDPDLSLQIFHHAHPSLSHAPQPL----HALFLK-LSRARRFYHLE 107

Query: 161 SILRGILDSD----------SFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFR 210
           S+L  + +            ++ L  K   ++    +         + L       K+ R
Sbjct: 108 SLLTHLPNPPPEPPLTTLIRAYGLAGKPLSALRIFLKFQPLGVRSLNALLNALVQNKRHR 167

Query: 211 NATDTF-CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
            A   F      +  +P + SCN  L +L     VD+A+    EM    + PNV + + V
Sbjct: 168 LAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTV 227

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +  F   G +E A+ VF  +   G++P VT+Y  L+SG C  G L  A++  +LME+N +
Sbjct: 228 LGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRV 287

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QP+ +T+  +I  +CK  K  EA  +  +M    + P+ V    +++   + G+ E    
Sbjct: 288 QPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVERACE 347

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           ++  ++R G +V     + ++  LCKEGK  +A  ++ +L+K   V +  TY+ LI G C
Sbjct: 348 VWRGVVRKGWRVGGAVVSTIVHWLCKEGKVVEARGVLDELEKGE-VASLMTYNTLIAGMC 406

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            R     A +L+  M+  G  PN   + +LM  FC+  D   A  VL EM+E    P+  
Sbjct: 407 ERGQLCEAGRLWDEMVEKGRVPNAFTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKS 466

Query: 510 ILSELYSGLHHCG--KDEL 526
             S L  G+   G  K+E+
Sbjct: 467 TFSILVDGISLSGGKKEEI 485



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/217 (20%), Positives = 106/217 (48%), Gaps = 7/217 (3%)

Query: 330 QP-NVITFNTLIFGFCKKGKLHEANRIF-SEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           QP  V + N L+    +  +   A+ +F S  +   + PNVV+ N L+    +    ++ 
Sbjct: 146 QPLGVRSLNALLNALVQNKRHRLAHSVFKSSTEKFRLVPNVVSCNILLKALCKRNEVDVA 205

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             + +EM   G+  ++++Y+ ++ G   +G  + A  +  ++     +P+ ++Y+ L++G
Sbjct: 206 VRVLDEMSLMGLVPNVVSYSTVLGGFVFKGDMESAMRVFGEILDKGWMPDVTSYTVLMSG 265

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C       A ++   M  +  +P++  + +++  +C+      A  +L +M+EK + P 
Sbjct: 266 FCRLGKLVDAIRMMDLMEENRVQPSEVTYGVMIEAYCKGRKPGEAVNLLEDMVEKGLVPS 325

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           S++  ++   L   G  E A +++     RG++ KG+
Sbjct: 326 SVLCCKVVDLLCEEGSVERACEVW-----RGVVRKGW 357



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 9/228 (3%)

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE--- 392
             TLI  +   GK   A RIF + +   V     + N L+N   Q     +  S+++   
Sbjct: 122 LTTLIRAYGLAGKPLSALRIFLKFQPLGVR----SLNALLNALVQNKRHRLAHSVFKSST 177

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           E  R  +  ++++ N L+  LCK  +   A  ++ ++    LVPN  +YS ++ G   + 
Sbjct: 178 EKFR--LVPNVVSCNILLKALCKRNEVDVAVRVLDEMSLMGLVPNVVSYSTVLGGFVFKG 235

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           + E A +++  ++  G  P+   + +LMS FC+      A  ++  M E  + P  +   
Sbjct: 236 DMESAMRVFGEILDKGWMPDVTSYTVLMSGFCRLGKLVDAIRMMDLMEENRVQPSEVTYG 295

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            +        K   A+ L   M  +GL+P      + ++   E G  E
Sbjct: 296 VMIEAYCKGRKPGEAVNLLEDMVEKGLVPSSVLCCKVVDLLCEEGSVE 343


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 171/386 (44%), Gaps = 35/386 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L   Y              +MR  G    + + N  ++      R++ A 
Sbjct: 231 CSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAY 290

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            ++ EM+R  +  NV T +  + AFCK G+++ A+++F  M   G +P+  TY +L+ G 
Sbjct: 291 SYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGT 350

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A+   + M   G+ PNV+T+  ++ G CK+GK+ EA+ + S M+   V  N 
Sbjct: 351 CKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANE 410

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE------------ 416
           + Y TLI+G+    NSE    L  +M   G+++D+  Y  LI GLCK+            
Sbjct: 411 LLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHK 470

Query: 417 -----------------------GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                                  GK  +A  L+  +  +   PN  TY ALI G C   +
Sbjct: 471 MAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGS 530

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A   +  M   G  PN   +  L+  FC+    ++A  ++ EM++K M+ D ++ + 
Sbjct: 531 ISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTS 590

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  G       + A  L  KM   GL
Sbjct: 591 LIDGYMKQANLQDAFALKTKMIESGL 616



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 188/408 (46%), Gaps = 44/408 (10%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P V D L    A      +A     ++R     P   +CN  L  L  + +     G  +
Sbjct: 134 PSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG----GLVR 189

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            +      PNV+T N+V+   CK G +  A  +F  M++MG  P V TYN+LI G+   G
Sbjct: 190 RLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 249

Query: 313 --------------------------LLSLAMKFKNL---------MEKNGIQPNVITFN 337
                                     L++   KF  +         M++ G+  NV+TF+
Sbjct: 250 DLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFS 309

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T +  FCK+G + EA ++F++M+   + PN  TY +L++G  + G  +    L +EM+  
Sbjct: 310 TFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 369

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  +++TY  ++ GLCKEGK  +A  ++  +++  +  N   Y+ LI G  +  NSERA
Sbjct: 370 GLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERA 429

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M   G   +  ++  L+   C+++  D A  +L +M    + P+++I + +   
Sbjct: 430 LDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDA 489

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
           L   GK+  A+ L  K     +L  GF       CA  +G  ++G +S
Sbjct: 490 LFKAGKESEAVALLHK-----ILDSGFQPNVVTYCALIDGLCKAGSIS 532



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 164/367 (44%), Gaps = 9/367 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++        +   A   F +M+  G  P + + N  +        ++       EMR
Sbjct: 203 FNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMR 262

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++  + +V T N +++ F K G +E+A   F  M+  G + +V T++T +   C +GL+ 
Sbjct: 263 KSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQ 322

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AMK    M   G+ PN  T+ +L+ G CK G+L +A  +  EM    + PNVVTY  ++
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 382

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G      ++   M R G+K + L Y  LI G      +++A  L+  +    + 
Sbjct: 383 DGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGME 442

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            + S Y  LI G C  +  + A  L   M   G RPN  I+  +M    +      A  +
Sbjct: 443 LDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVAL 502

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDK 546
           L ++L+    P+ +    L  GL   G    A+  F KM   GL P          GF K
Sbjct: 503 LHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCK 562

Query: 547 LRTINCA 553
           + ++N A
Sbjct: 563 IGSLNKA 569



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 162/385 (42%), Gaps = 45/385 (11%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF-LSSLLD----SERVD 245
           ++ + F      +      + A   F QMR  G +P     N+F  +SL+D    + R+D
Sbjct: 303 ANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMP-----NEFTYTSLVDGTCKAGRLD 357

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+    EM    + PNV T  +++   CK G +  A  V   ME  G   +   Y TLI
Sbjct: 358 DAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            GH        A+   N M+  G++ +V  + TLI+G CK  K+ EA  +  +M    + 
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN V Y T+++   + G      +L  ++L +G + +++TY ALI GLCK G   +A   
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537

Query: 426 VKDLDKNSLVPNASTYSALITGQC-----------------------------------V 450
              + +  L PN   Y+ALI G C                                    
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
           + N + AF L   MI SG + + + +   +S FC       A  VL EM+   + PD  +
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657

Query: 511 LSELYSGLHHCGKDELAMKLFRKME 535
            + L       G  E A  L  +ME
Sbjct: 658 YNCLIRKYQKLGNMEEASSLQNEME 682



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 129/276 (46%), Gaps = 33/276 (11%)

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI-------------------- 334
           +PSV   +TL+S   + GLL  A++    + +  + PN                      
Sbjct: 133 LPSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRR 190

Query: 335 -----------TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
                      TFN +I   CK+G+L EA  +F  MKA   SP+VVTYN+LI+GYG+ G+
Sbjct: 191 LFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGD 250

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            E    L  EM ++G   D++TYNALI    K G+ +KA     ++ +  +V N  T+S 
Sbjct: 251 LEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFST 310

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
            +   C     + A +L+  M   G  PN+  +  L+   C+    D A  +L EM+ + 
Sbjct: 311 FVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQG 370

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           + P+ +  + +  GL   GK   A  +   ME  G+
Sbjct: 371 LVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGV 406


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 39/384 (10%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P VFD L    A      +A     ++R     P   +CN  L  L  + +     G  +
Sbjct: 133 PSVFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQG----GLVR 188

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH--CN 310
            +  +  +PNV+T N+V+   CK G +  A  +F  M++MG  P V TYN+LI G+  C 
Sbjct: 189 RLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCG 248

Query: 311 K---------------------------------GLLSLAMKFKNLMEKNGIQPNVITFN 337
           +                                 G +  A  +   M++ G+  NV+T +
Sbjct: 249 ELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLS 308

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T +  FCK+G + EA ++F++M+   + PN  TY +L++G  + G  +    L +EM+  
Sbjct: 309 TFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ 368

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  +++TY  ++ GLCKEGK   A  ++  +++  +  N   Y+ LI G  + KNSERA
Sbjct: 369 GLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERA 428

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L   M   G   +  ++  L+   C+ +  D A  +L +M +  + P+++I + +   
Sbjct: 429 LDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDA 488

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               GK+  A+ L  K+   GL P
Sbjct: 489 FFKAGKESEAVALLHKIPDSGLQP 512



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 171/386 (44%), Gaps = 35/386 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L   Y    +         +MR  G    + + N  ++       ++ A 
Sbjct: 230 CSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAY 289

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            ++ EM+R  +  NV TL+  + AFCK G++  A+++F  M   G +P+  TY +L+ G 
Sbjct: 290 SYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGT 349

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G L  A+   + M   G+ PNV+T+  ++ G CK+GK+  A+ + S M+   V  N 
Sbjct: 350 CKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANE 409

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC-------------- 414
           + Y TLI+G+    NSE    L  EM   G+++D+  Y  LI GLC              
Sbjct: 410 LLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHK 469

Query: 415 ---------------------KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
                                K GK  +A  L+  +  + L PN  TY ALI G C   +
Sbjct: 470 MDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGS 529

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              A   +  M   G  PN  ++  L+  FC+     +A  ++ EM++K M+ D ++ + 
Sbjct: 530 IYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTS 589

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  G    G  + A  L  KM   GL
Sbjct: 590 LIDGHMKQGDLQGAFALKAKMIETGL 615



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 159/346 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++      + +   A   F +M+  G  P + + N  +        ++       EMR
Sbjct: 202 FNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMR 261

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++  + +V T N +++ F K G IE+A   F  M+ +G + +V T +T +   C +GL+ 
Sbjct: 262 KSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVR 321

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AMK    M   G+ PN  T+ +L+ G CK G+L +A  +  EM    + PNVVTY  ++
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMV 381

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G   +   +   M R G+K + L Y  LI G      +++A  L+ ++    + 
Sbjct: 382 DGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGME 441

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            + S Y  LI G C  +  + A  L   M   G RPN  I+  +M  F +      A  +
Sbjct: 442 LDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVAL 501

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L ++ +  + P+ +    L  GL   G    A+  F KM   GL P
Sbjct: 502 LHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 156/337 (46%), Gaps = 10/337 (2%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKF-LSSLLD----SERVDIALGFYKEMRRNRISPNVY 264
           R A   F QMR  G +P     N+F  +SL+D    + R+D A+    EM    + PNV 
Sbjct: 321 REAMKLFAQMRVRGMMP-----NEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T  +++   CK G +  A +V   ME  G   +   Y TLI GH        A+   N M
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +  G++ +V  + TLI+G CK  KL EA  +  +M    + PN V Y T+++ + + G  
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
               +L  ++  +G++ +++TY ALI GLCK G   +A      + +  L PN   Y+ L
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C   +  +A  L   M+  G   +K ++  L+    +  D   A  +  +M+E  +
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D    +   SG  +    + A  +  +M   G+ P
Sbjct: 616 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 652



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 4/272 (1%)

Query: 197 DLLFKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           +LL+ T  H     K    A D   +M++ G    +      +  L   +++D A     
Sbjct: 409 ELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLH 468

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           +M    + PN      +M AF K G    AV +   +   G  P+V TY  LI G C  G
Sbjct: 469 KMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAG 528

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A+   + M + G+ PNV  + TLI GFCK G L +A  + +EM    +S + V Y 
Sbjct: 529 SIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYT 588

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +LI+G+ + G+ +   +L  +M+  G+++D+  Y   I G C     ++A  ++ ++   
Sbjct: 589 SLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGT 648

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            + P+ + Y+ LI       N E A  L   M
Sbjct: 649 GITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 2/216 (0%)

Query: 181 SILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           S+L+    C   P  +++  +   +    K   A     ++ D G  P + +    +  L
Sbjct: 465 SLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
             +  +  A+  + +MR   + PNV     ++  FCK+G + +AV +   M   G     
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDK 584

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
             Y +LI GH  +G L  A   K  M + G+Q ++  +   I GFC    + EA  + SE
Sbjct: 585 VVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSE 644

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           M  T ++P+   YN LI  Y ++GN E  +SL  EM
Sbjct: 645 MIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 45/252 (17%)

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +PSV  ++TL+S   + GLL  A++    + +  + PN  T N ++    +  +     R
Sbjct: 132 LPSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRR 189

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F  + A    PNV T+N +I+   + G      +L+  M   G   D++TYN+LI G  
Sbjct: 190 LFEHLPA----PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYG 245

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS--ERAFQLYKSMIRSGCRPN 472
           K G+ ++   LV ++ K+    +  TY+ALI   C  K    E+A+  +  M R G   N
Sbjct: 246 KCGELEEVELLVSEMRKSGCAADVVTYNALI--NCFSKFGWIEKAYSYFGEMKRLGVMAN 303

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
                  +  FC+                                    G    AMKLF 
Sbjct: 304 VVTLSTFVDAFCKE-----------------------------------GLVREAMKLFA 328

Query: 533 KMEIRGLLPKGF 544
           +M +RG++P  F
Sbjct: 329 QMRVRGMMPNEF 340


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG--FLPIIESCNKFLSSLLDSERVDI 246
           C  +   +++L K      + + A +    M D G    P + S    ++       +D 
Sbjct: 158 CIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDK 217

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A G Y EM    I PNV T + ++ A CK   +++A+EV  +M   G +P+  TYN+++ 
Sbjct: 218 AYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVH 277

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C+ G    A+ F   M  +G++P+V+T+N+L+   CK G+  EA ++F  M    + P
Sbjct: 278 GYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKP 337

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            + TY TL+ GY   G       L + M+RNGI  +   ++ LI    K+GK  +A  + 
Sbjct: 338 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVF 397

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L P+  TY  +I   C     E A + ++ MI     P   ++  L+ + C  
Sbjct: 398 SKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIF 457

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           + +D+A E++LEML++ +  D+I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 458 DKWDKAKELILEMLDRGICLDTIFFNSIID--SHCKEGRVIESEKLFDLMVRIGVKP 512



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  +     S +   A+GF K+M  + + P+V T N +M 
Sbjct: 253 AMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMD 312

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 313 YLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 372

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N   F+ LI  + K+GK+ +A  +FS+M+   ++P+ VTY T+I    + G  E     +
Sbjct: 373 NHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYF 432

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+   +    + YN+LI  LC   K  KA  L+ ++    +  +   ++++I   C  
Sbjct: 433 EQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKE 492

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+  +C     D A ++L  M+   M PD +  
Sbjct: 493 GRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 552

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + E A+ LFR+ME  G+ P
Sbjct: 553 NTLINGYCKISRMEDALVLFREMESSGVSP 582



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 161/313 (51%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA + K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 376 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              R+SP     N ++H+ C     ++A E+   M   G       +N++I  HC +G +
Sbjct: 436 IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRV 495

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT++TLI G+C  GK+ EA ++ + M +  + P+ VTYNTL
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTL 555

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L+ EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 556 INGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGT 615

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 616 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 675

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 676 LFAALSANGLVPD 688



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 153/314 (48%), Gaps = 4/314 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +VD A+  + +MR+  ++P+  T   V+   CK G +E A+  F+ M      P    YN
Sbjct: 389 KVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYN 448

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +LI   C       A +    M   GI  + I FN++I   CK+G++ E+ ++F  M   
Sbjct: 449 SLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 508

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P+++TY+TLI+GY   G  +    L   M+  G+K D +TYN LI G CK  + + A
Sbjct: 509 GVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDA 568

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L ++++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     + +++  
Sbjct: 569 LVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHG 628

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +   GL+P 
Sbjct: 629 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVP- 687

Query: 543 GFDKLRTINCAPEN 556
               +RT +   EN
Sbjct: 688 ---DVRTYSLMAEN 698



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 14/336 (4%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++ Y  +M D   SP  +V++ L  +     K+  A +   +M D G  L  I  
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-- 480

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   +  M R  + P++ T + ++  +C  G ++ A ++ 
Sbjct: 481 ---FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLL 537

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            +M S+G  P   TYNTLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 538 ASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQT 597

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+
Sbjct: 598 RRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 657

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I  L K G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  
Sbjct: 658 NIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEE 717

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           +GC  N  +   ++    Q  D  RA   L  + EK
Sbjct: 718 NGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/304 (26%), Positives = 132/304 (43%), Gaps = 18/304 (5%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIER-----AVEVFKNMESMG---FIPSVTTY 301
           F + +RR R   ++Y LN      C L  + R     AV  +  M   G     P++ TY
Sbjct: 42  FDELLRRGR-GASIYGLN------CALADVARHSPAAAVSRYNRMARAGADEVTPNLCTY 94

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMK 360
             L+   C  G L L       + K G   + I F  ++ G C   +  +A + +   M 
Sbjct: 95  GILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMT 154

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALILGLCKEGK 418
                PNV +YN L+ G      S+    L + M  +G     D+++Y  +I G  KEG 
Sbjct: 155 QLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGD 214

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             KA     ++    ++PN  TYS++I   C  +  ++A ++  SM+++G  PN   +  
Sbjct: 215 LDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNS 274

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++  +C +     A   L +M    + PD +  + L   L   G+   A K+F  M  RG
Sbjct: 275 IVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG 334

Query: 539 LLPK 542
           L P+
Sbjct: 335 LKPE 338



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 26/345 (7%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFK 201
           ++H L    K+  ++ ++  +LD     L +  F+SI+ S+    R+ +S  L FDL+ +
Sbjct: 450 LIHSLCIFDKWDKAKELILEMLDR-GICLDTIFFNSIIDSHCKEGRVIESEKL-FDLMVR 507

Query: 202 T---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
                           Y    K   AT     M   G  P   + N  ++      R++ 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL  ++EM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ 
Sbjct: 568 ALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILH 627

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A  + 
Sbjct: 628 GLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLV 686

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V TY+ +     + G  E    L+  M  NG   +    N+++  L + G   +A   
Sbjct: 687 PDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTY 746

Query: 426 VKDLDKNSLVPNASTYS---ALITGQCVRKNSERAFQLYKSMIRS 467
           +  +D+      AST S    L++G   ++      + YKS I S
Sbjct: 747 LFMIDEKHFSLEASTASLFLDLLSGGKYQEYHRFLPEKYKSFIES 791


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/291 (31%), Positives = 153/291 (52%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G LP + + N  L+ L    R+  A G   EMR   + P++ T   ++H +C  G
Sbjct: 41  EMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEG 100

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +++A+++F  M +    P + TYNTLI G C +G L  A    + M    I PN +T++
Sbjct: 101 KLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYS 160

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   C+KG++ +A     EM    + PN++TYN++I GY + GN   G    ++M+ N
Sbjct: 161 ILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN 220

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            +  D++TYN LI G  KE K   A  L+  ++K  + P+  TY+ LI G  V  N + A
Sbjct: 221 KVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
             +++ M   G  P+++ +  +++      +   A ++  EML++  APD 
Sbjct: 281 GWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 146/284 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ L       ++  +A     +MR+ G  P + +    +       ++D AL
Sbjct: 47  CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 106

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M   R+ P++ T N ++   C+ G +++A +++ +M S    P+  TY+ LI  H
Sbjct: 107 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 166

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C KG +  A  F + M   GI PN++T+N++I G+C+ G + +  +   +M    VSP++
Sbjct: 167 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDL 226

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYNTLI+GY +         L   M +  ++ D++TYN LI G    G  ++A ++ + 
Sbjct: 227 ITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEK 286

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +    + P+  TY ++I G     NS+ AFQL+  M++ G  P+
Sbjct: 287 MCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 132/256 (51%)

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            + M   G +P    Y  +I G C  GL+S A++ ++ M   G  P+V+T+NTL+ G CK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + +L +A  + +EM+   V P++ T+ TLI+GY   G  +    L++ ML   ++ DI+T
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN LI G+C++G   KA  L  D+    + PN  TYS LI   C +   E AF     MI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  PN   +  ++  +C++ +  +  + L +M+   ++PD I  + L  G     K  
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 526 LAMKLFRKMEIRGLLP 541
            A KL   ME   + P
Sbjct: 244 DAFKLLNMMEKEKVQP 259



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 161/304 (52%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           + + +EMR   + P+     MV+  FC+ G++  A+ V   M   G +P V TYNTL++G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C +  L  A    N M + G+ P++ TF TLI G+C +GKL +A ++F  M    + P+
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +VTYNTLI+G  + G+ +    L+++M    I  + +TY+ LI   C++G+ + A   + 
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 180

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++    ++PN  TY+++I G C   N  +  +  + M+ +   P+   +  L+  + + +
Sbjct: 181 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 240

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
               A ++L  M ++ + PD +  + L +G    G  + A  +F KM  +G+ P  +  +
Sbjct: 241 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 300

Query: 548 RTIN 551
             IN
Sbjct: 301 SMIN 304



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 158/324 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MR +G +P        +     +  +  AL    EM      P+V T N +++  CK  
Sbjct: 6   EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 65

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  +   M   G  P + T+ TLI G+C +G L  A++  + M    ++P+++T+N
Sbjct: 66  RLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYN 125

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TLI G C++G L +AN ++ +M +  + PN VTY+ LI+ + + G  E      +EM+  
Sbjct: 126 TLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK 185

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI  +I+TYN++I G C+ G   K    ++ +  N + P+  TY+ LI G         A
Sbjct: 186 GILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDA 245

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F+L   M +   +P+   + ML++ F  + +   A  +  +M  K + PD      + +G
Sbjct: 246 FKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMING 305

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G  + A +L  +M  RG  P
Sbjct: 306 HVTAGNSKEAFQLHDEMLQRGFAP 329


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 2/356 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G+      D   +L D ++   + C     V++ L        K   A +    M +
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQ--KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLE 155

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
              +P + +    +     +  +D A    ++M+ + ++P+    N +++  CK   +E 
Sbjct: 156 RSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEE 215

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             ++ + M   G  P   +YNT+++  C  G    A K    M +    P+V+T+N+L+ 
Sbjct: 216 VSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMD 275

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFCK  K+ EA R+  +M     +P V+TY TLI G+ +         + E+M + GI  
Sbjct: 276 GFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP 335

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TYN L+ GLCK GK ++A  L++ + +    P+  TYS L+ G C     + A  L 
Sbjct: 336 DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLL 395

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           + M+  GC+PN   F  ++  FC+    D   +VL  M E    PD +  S L  G
Sbjct: 396 EMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDG 451



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 8/381 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   +++ D   KL + +  S    D+  + ++ L      + +    +    +M 
Sbjct: 167 SLIVGCCQTNALDEARKLMEKMKESGLTPDT--VAYNALLNGLCKQNQLEEVSKLLEEMV 224

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P   S N  ++ L +S + + A    ++M   +  P+V T N +M  FCK+  ++
Sbjct: 225 EAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMD 284

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  + ++M      P+V TY TLI G      L+ A +    M K GI P+++T+N L+
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLL 344

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK GKL EA+ +   M   + +P+VVTY+ L+NG  ++G  +    L E ML  G +
Sbjct: 345 DGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQ 404

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++T+N +I G CK GK  +   +++ + + S  P+  TYS LI G C     + AF +
Sbjct: 405 PNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
                  G  P+K  +  ++   C     + A EV+  M ++   P S   + +  GL  
Sbjct: 465 L------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
             + + A+K+ + M  RG  P
Sbjct: 519 VERGDEALKMLQVMSERGCEP 539



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 149/308 (48%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L   +R+D A     EM +    P+    N ++   CK+G I+ A  V K M    
Sbjct: 98  LIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS 157

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
            +P V TY +LI G C    L  A K    M+++G+ P+ + +N L+ G CK+ +L E +
Sbjct: 158 CVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVS 217

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++  EM      P+  +YNT++    + G  E    + E+M+      D++TYN+L+ G 
Sbjct: 218 KLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGF 277

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK  K  +A  L++D+      P   TY+ LI G         A+++ + M ++G  P+ 
Sbjct: 278 CKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDL 337

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L+   C+    + A E+L  M+EK  APD +  S L +GL   GK + A  L   
Sbjct: 338 VTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEM 397

Query: 534 MEIRGLLP 541
           M  RG  P
Sbjct: 398 MLERGCQP 405



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 186/419 (44%), Gaps = 43/419 (10%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++  + +S  ++   K+ + ++   + C    + ++ L   +    K   A     
Sbjct: 234 SYNTVVACLCESGKYEEAGKILEKMIE--KKCGPDVVTYNSLMDGFCKVSKMDEAERLLE 291

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M      P + +    +     ++R+  A    ++M +  ISP++ T N ++   CK G
Sbjct: 292 DMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAG 351

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A E+ + M      P V TY+ L++G C  G +  A     +M + G QPN++TFN
Sbjct: 352 KLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFN 411

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I GFCK GK+ E +++   MK  + +P+VVTY+TLI+GY +    +   ++       
Sbjct: 412 TMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------ 465

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS------------------ 439
           GI  D  +Y++++ GLC  GK ++A  ++  + K    P +S                  
Sbjct: 466 GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEA 525

Query: 440 -----------------TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
                            TYS LI G C  K  E A  +   M+  GC P+   +  L+  
Sbjct: 526 LKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDG 585

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           FC+    D A +    M +    PD +  + L SG    G  E A+++ + M  +G  P
Sbjct: 586 FCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNP 644



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 175/377 (46%), Gaps = 31/377 (8%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G       D   +L + ++   R C  + + +  L   ++   +  +A      M 
Sbjct: 272 SLMDGFCKVSKMDEAERLLEDMVG--RRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + N  L  L  + +++ A    + M     +P+V T +++++  CKLG ++
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  + + M   G  P++ T+NT+I G C  G +    K   LM++    P+V+T++TLI
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLI 449

Query: 341 FGFCKK-----------------------------GKLHEANRIFSEMKATNVSPNVVTY 371
            G+CK                              GK+ EA  +   M      P    Y
Sbjct: 450 DGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHY 509

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             +I G   V   +    + + M   G + ++ TY+ LI GLCK  + + A  ++  + +
Sbjct: 510 ALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLE 569

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
              VP+ +TY++LI G C     + A+Q +K+M  SGC P+K  + +L+S FCQ+ + ++
Sbjct: 570 KGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEK 629

Query: 492 AAEVLLEMLEKCMAPDS 508
           A EV+  MLEK   PD+
Sbjct: 630 AIEVMQLMLEKGCNPDA 646



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 2/318 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P + + N  L +      +D AL  ++   +   SP  +T  +++H  C+   I+ A 
Sbjct: 55  FSPDVITHNTILKAYCQIGDLDRALSHFR--GKMWCSPTAFTYCILIHGLCQCQRIDEAY 112

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
           ++   M      P    YN LI+G C  G +  A     +M +    P+VIT+ +LI G 
Sbjct: 113 QLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+   L EA ++  +MK + ++P+ V YN L+NG  +    E  + L EEM+  G + D 
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            +YN ++  LC+ GK ++A  +++ + +    P+  TY++L+ G C     + A +L + 
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+   C P    +  L+  F + +    A  V+ +M +  ++PD +  + L  GL   GK
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 524 DELAMKLFRKMEIRGLLP 541
            E A +L   M  +   P
Sbjct: 353 LEEAHELLEVMVEKDCAP 370



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 148/307 (48%), Gaps = 6/307 (1%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           + L    EM   R SP+V T N ++ A+C++G ++RA+  F+    M   P+  TY  LI
Sbjct: 42  MVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILI 99

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G C    +  A +  + M +    P+   +N LI G CK GK+  A  +   M   +  
Sbjct: 100 HGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCV 159

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V+TY +LI G  Q    +    L E+M  +G+  D + YNAL+ GLCK+ + ++ + L
Sbjct: 160 PDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKL 219

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++++ +    P+  +Y+ ++   C     E A ++ + MI   C P+   +  LM  FC+
Sbjct: 220 LEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCK 279

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
               D A  +L +M+ +  AP  I  + L  G     +   A ++   M   G+ P    
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISP---- 335

Query: 546 KLRTINC 552
            L T NC
Sbjct: 336 DLVTYNC 342



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 142/292 (48%), Gaps = 2/292 (0%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F++E   +   P+  T   ++  F + G  +  +E+   M +  F P V T+NT++  +C
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A+   +   K    P   T+  LI G C+  ++ EA ++  EM   +  P+  
Sbjct: 71  QIGDLDRAL--SHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAA 128

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            YN LI G  ++G  +   ++ + ML      D++TY +LI+G C+     +A  L++ +
Sbjct: 129 VYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKM 188

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            ++ L P+   Y+AL+ G C +   E   +L + M+ +G  P+   +  +++  C++  +
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + A ++L +M+EK   PD +  + L  G     K + A +L   M  R   P
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAP 300



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 2/234 (0%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+  T+  LI GF + G       I +EM A   SP+V+T+NT++  Y Q+G+ +   S
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            +   +         TY  LI GLC+  +  +A  L+ ++ +    P+A+ Y+ LI G C
Sbjct: 81  HFRGKMW--CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                + A  + K M+   C P+   +  L+   CQ    D A +++ +M E  + PD++
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
             + L +GL    + E   KL  +M   G  P  F     + C  E+G+ E  G
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAG 252



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 2/191 (1%)

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           E    F E  +    P+  TY  LI G+ + GNS+M   +  EML      D++T+N ++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
              C+ G   +A  L     K    P A TY  LI G C  +  + A+QL   MI+  C 
Sbjct: 67  KAYCQIGDLDRA--LSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+  ++  L++  C+    D A  VL  MLE+   PD I  + L  G       + A KL
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 531 FRKMEIRGLLP 541
             KM+  GL P
Sbjct: 185 MEKMKESGLTP 195



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 102/228 (44%), Gaps = 6/228 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  L   Y    + ++A          G  P   S +  L  L  + +V+ A 
Sbjct: 438 CTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQ 491

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                M +    P      +++   C +   + A+++ + M   G  P++ TY+ LI+G 
Sbjct: 492 EVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +  A+   ++M + G  P+V T+ +LI GFCK  K+  A + F  M+ +   P+ 
Sbjct: 552 CKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDK 611

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + YN LI+G+ Q GN E    + + ML  G   D  TY +L+  L  E
Sbjct: 612 LAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 5/173 (2%)

Query: 136 SSLTLETHSIVLHILTKNRKFKSSES---ILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           S+  +E    V+ ++TK     +S     I+ G+ D +  D   K+    + S R C+ +
Sbjct: 483 STGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQ--VMSERGCEPN 540

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              + +L       K+  +A +    M + G +P + +    +       ++D A   +K
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            MR +   P+    N+++  FC+ G +E+A+EV + M   G  P   TY +L+
Sbjct: 601 TMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 169/330 (51%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     S +   A+GF K+MR + + P+V T +++M 
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P +TTY TL+ G+  KG L       +LM +NGI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   F+ LI  +  +GK+ +A  +FS+M+   ++PN VTY  +I    + G  E     +
Sbjct: 370 DHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+    + YN+LI GLC   K ++A  L+ ++    +  N   ++++I   C  
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L++ M+R G +PN   +  L++ +C     D A ++L  M+   + P+++  
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L +G     + E A+ LF++ME  G+ P
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSP 579



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 170/358 (47%), Gaps = 7/358 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD---YGFLPIIESCNKFLSSLLDSERVD 245
           C  +   +++L K      + + A +    M D    G  P + S    ++        D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   Y EM    I P+V T N ++ A CK   +++A+EV   M   G +P   TYN+++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C+ G    A+ F   M  +G++P+V+T++ L+   CK G+  EA +IF  M    + 
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P + TY TL+ GY   G       L + M+RNGI  D   ++ LI     +GK  +A  +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLV 393

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
              + +  L PNA TY A+I   C     E A   ++ MI  G  P   ++  L+   C 
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
              ++RA E++LEML++ +  ++I  + +     HC  G+   + KLF  M   G+ P
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKP 509



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 171/344 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF +L   YA++ K   A   F +MR  G  P   +    +  L  S RV+ A+ ++++M
Sbjct: 373 VFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +SP     N ++H  C     ERA E+   M   G   +   +N++I  HC +G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K   LM + G++PNVIT+NTLI G+C  GK+ EA ++ S M +  + PN VTY+TL
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY ++   E    L++EM  +G+  DI+TYN ++ GL +  +T  A  L   + ++  
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C  K ++ A Q+++++     +     F +++    +    D A +
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           + +      + P+      +   +   G  E   +LF  ME  G
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 171/365 (46%), Gaps = 2/365 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FDS+  + R        +  L + YA +            M   G  P     +  + 
Sbjct: 322 KIFDSM--TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILIC 379

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +  +  +VD A+  + +MR+  ++PN  T   V+   CK G +E A+  F+ M   G  P
Sbjct: 380 AYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 439

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
               YN+LI G C       A +    M   GI  N I FN++I   CK+G++ E+ ++F
Sbjct: 440 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 499

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    V PNV+TYNTLINGY   G  +    L   M+  G+K + +TY+ LI G CK 
Sbjct: 500 ELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKI 559

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            + + A  L K+++ + + P+  TY+ ++ G    + +  A +LY  +  SG +     +
Sbjct: 560 SRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTY 619

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +++   C+N+  D A ++   +    +  ++   + +   L   G+++ A  LF     
Sbjct: 620 NIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 679

Query: 537 RGLLP 541
            GL+P
Sbjct: 680 NGLVP 684



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 153/344 (44%), Gaps = 6/344 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + LL        +   A   F  M   G  P I +    L        +    G    
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M RN I P+ Y  ++++ A+   G +++A+ VF  M   G  P+  TY  +I   C  G 
Sbjct: 362 MVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  AM +   M   G+ P  I +N+LI G C   K   A  +  EM    +  N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+ + + G       L+E M+R G+K +++TYN LI G C  GK  +A  L+  +    
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PN  TYS LI G C     E A  L+K M  SG  P+   + +++    Q      A 
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL---AMKLFRKM 534
           E+ + + E   +   I LS     LH   K++L   A+++F+ +
Sbjct: 602 ELYVRITE---SGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 137/283 (48%), Gaps = 3/283 (1%)

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN---GIQPNVITFNTLIF 341
           V + M  +G IP+V +YN L+ G C++     A++  ++M  +   G  P+V+++ T+I 
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GF K+G   +A   + EM    + P+VVTYN++I    +    +    +   M++NG+  
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D +TYN+++ G C  G+ K+A   +K +  + + P+  TYS L+   C       A +++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            SM + G +P    +  L+  +           +L  M+   + PD  + S L     + 
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
           GK + AM +F KM  +GL P        I    ++G  E   L
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 20/339 (5%)

Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
            ++ D++LY  +M D   SP  +V++ L        K+  A +   +M D G  L  I  
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-- 477

Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              F +S++DS     RV  +   ++ M R  + PNV T N +++ +C  G ++ A+++ 
Sbjct: 478 ---FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
             M S+G  P+  TY+TLI+G+C    +  A+     ME +G+ P++IT+N ++ G  + 
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +   A  ++  +  +     + TYN +++G  +   ++    +++ +    +K++  T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKS 463
           N +I  L K G+  +A  L      N LVPN  TY  +   I GQ +    E   QL+ S
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLS 711

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
           M  +GC  +  +   ++    Q  +  RA   L  + EK
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 128/310 (41%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P + TY  LI 
Sbjct: 38  FDELLRRGR-GASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G + + I F  L+ G C   +  +A              
Sbjct: 96  CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +     P+VV+Y T+ING+ + G+S+  
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML  GI  D++TYN++I  LCK     KA  ++  + KN ++P+  TY++++ G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A    K M   G  P+   + +LM   C+N     A ++   M ++ + P+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 336 ITTYGTLLQG 345



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           NR+ +   A  V+P++ TY  LI    + G  ++G +    +++ G +VD + +  L+ G
Sbjct: 73  NRM-ARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131

Query: 413 LCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGC 469
           LC + +T  A  +V + + +   +PN  +Y+ L+ G C    S+ A +L   M   R G 
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191

Query: 470 RPNKHI-FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            P   + +  +++ F +  D D+A     EML++ + PD +  + + + L      + AM
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251

Query: 529 KLFRKMEIRGLLP 541
           ++   M   G++P
Sbjct: 252 EVLNTMVKNGVMP 264



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 21/319 (6%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPL------- 194
           ++H L    K++ +E ++  +LD     L +  F+SI+ S+    R+ +S  L       
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505

Query: 195 -------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
                   ++ L   Y    K   A      M   G  P   + +  ++      R++ A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  +KEM  + +SP++ T N+++    +      A E++  +   G    ++TYN ++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625

Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            C   L   A++ F+NL   + ++    TFN +I    K G+  EA  +F    +  + P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N  TY  +       G  E    L+  M  NG  VD    N ++  L + G+  +A   +
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744

Query: 427 KDLDKNSLVPNASTYSALI 445
             +D+      AST S  I
Sbjct: 745 SMIDEKHFSLEASTASLFI 763



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 35/218 (16%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y    +  +A   F +M   G  P I + N  L  L  + R   A   Y  
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM------------------------ 289
           +  +     + T N+++H  CK  + + A+++F+N+                        
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 290 -----------ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                       S G +P+  TY  +      +GLL    +    ME NG   +    N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           ++    ++G++  A    S +   + S    T +  I+
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 208/443 (46%), Gaps = 36/443 (8%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA 204
           +V HI    R+FK  + IL  +L  +      KL + +  S+R  +S+ LV+D+L    +
Sbjct: 100 LVSHIFAGQRRFKELQVILEQLLQEEG-----KLCELLSNSFRKWESTGLVWDMLLFLSS 154

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFL------------------------SSLLD 240
             +    +     +M+D       +S N  L                        S+++D
Sbjct: 155 RLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYSTVVD 214

Query: 241 S----ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                ++++ A+ F +      I P+V + N +M ++CKLG ++ A   F  +   G +P
Sbjct: 215 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVP 274

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           SV ++N LI+G C  G ++ A++  + M K+G++P+ +T+N L+ GF   G +  A  + 
Sbjct: 275 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVI 334

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-DILTYNALILGLCK 415
            +M    +SP+V+TY  L+ G  Q+GN +MG  L ++ML  G ++  I+ Y+ ++ GLCK
Sbjct: 335 QDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCK 394

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+  +A  L  DL+   L P+   YS +I G C     + A ++Y  M      PN   
Sbjct: 395 TGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRT 454

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
              +M   CQ      A  +L  ++      D I+ + +  G    G  E A++LF+   
Sbjct: 455 LGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAI 514

Query: 536 IRGLLP--KGFDKLRTINCAPEN 556
             G+ P    F+ L    C  +N
Sbjct: 515 ESGITPNVATFNSLIYGYCKTQN 537



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 16/345 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A   F  +  YG  P + + +  +  L    + D+A+  Y EM   RI PN  TL 
Sbjct: 397 RVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLG 456

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +M   C+ G++  A  +  ++ S G    +  YN +I G+   G +  A++   +  ++
Sbjct: 457 AIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIES 516

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI PNV TFN+LI+G+CK   + EA +I   +K   + P+VV+Y TL++ Y   G+ +  
Sbjct: 517 GITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSI 576

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGK------------TKKAAYLVKDLDKNSLV 435
             L  EM   GI    +TY+ +  GLC+  K             +K  ++++D++   + 
Sbjct: 577 EELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGIT 636

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ +I   C  K+  RAF+L+K M      P    + +L+ + C      +A   
Sbjct: 637 PDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRF 696

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRG 538
           L  + ++ ++      + +     HC  G  E+A+ LF ++  RG
Sbjct: 697 LYSLQKRNVSLSKFAYTTVIKA--HCVKGDPEMAVILFNQLLDRG 739



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 163/361 (45%), Gaps = 13/361 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L K +        A +    M D G  P + +    L        +D+ L   K+
Sbjct: 312 VTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKD 371

Query: 254 M-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           M  R     ++   ++++   CK G ++ A+ +F ++E+ G  P +  Y+ +I G C  G
Sbjct: 372 MLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLG 431

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
              +A++  + M    I PN  T   ++ G C+KG L EA  +   + ++  + +++ YN
Sbjct: 432 KFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYN 491

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            +I+GY + G  E    L++  + +GI  ++ T+N+LI G CK     +A  ++  +   
Sbjct: 492 IVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLY 551

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            LVP+  +Y+ L+       + +   +L + M   G  P    + ++    C+    +  
Sbjct: 552 GLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENC 611

Query: 493 AEVLLE-MLEK-----------CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +VL E +LEK            + PD I  + +   L        A +LF+KM+ + L 
Sbjct: 612 NQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLD 671

Query: 541 P 541
           P
Sbjct: 672 P 672



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 131/276 (47%), Gaps = 12/276 (4%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           ++ AL  +K    + I+PNV T N +++ +CK   I  A ++   ++  G +PSV +Y T
Sbjct: 503 IEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTT 562

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE----- 358
           L+  + N G +    + +  M+  GI P  +T++ +  G C+  KL   N++  E     
Sbjct: 563 LMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEK 622

Query: 359 -------MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
                  M++  ++P+ +TYNT+I    +V +      L+++M    +     TYN LI 
Sbjct: 623 FNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILID 682

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            LC  G  +KA   +  L K ++  +   Y+ +I   CV+ + E A  L+  ++  G   
Sbjct: 683 SLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNV 742

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
           +   +  +++  C+      +      ML + ++PD
Sbjct: 743 SIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPD 778



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/385 (23%), Positives = 170/385 (44%), Gaps = 54/385 (14%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-NR 258
           F+ + H   FR       Q+               ++ L+ SE  D+++ F+KE+R    
Sbjct: 42  FREFLHGHHFRGLVSELRQIH----------VEDIMAELM-SESSDLSVWFFKELRDIYG 90

Query: 259 ISPNVYTLNMVMHAFC------KLGII------------ERAVEVFKNMESMGFIPSVTT 300
              + ++  +V H F       +L +I            E     F+  ES G +  +  
Sbjct: 91  FRHSRFSTLLVSHIFAGQRRFKELQVILEQLLQEEGKLCELLSNSFRKWESTGLVWDMLL 150

Query: 301 YNTLISGHCNKGLLSL-AMKFKNL----------------------MEKNGIQPNVITFN 337
           + +      ++ L  L  MK +NL                      + K     N  T++
Sbjct: 151 FLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYS 210

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T++ G C++ KL +A       +  ++ P+VV++N++++ Y ++G  +M  S +  +L+ 
Sbjct: 211 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKC 270

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+   + ++N LI GLC  G   +A  L  D++K+ + P++ TY+ L+ G  +      A
Sbjct: 271 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGA 330

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII-LSELYS 516
            ++ + M+  G  P+   + +L+   CQ  + D    +L +ML +     SII  S + S
Sbjct: 331 GEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLS 390

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+ + A+ LF  +E  GL P
Sbjct: 391 GLCKTGRVDEALSLFYDLEAYGLTP 415



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 154/374 (41%), Gaps = 33/374 (8%)

Query: 140 LETHSIVLHILTKNRKF-------------------KSSESILRGILDSDSFDLPSKLFD 180
           L  +SIV+H L K  KF                   ++  +I+ G+           L D
Sbjct: 417 LVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLD 476

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           S++ S    D   ++++++   YA       A + F    + G  P + + N  +     
Sbjct: 477 SLISSGDTLD--IILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCK 534

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           ++ +  A      ++   + P+V +   +M A+   G I+   E+ + M++ G  P+  T
Sbjct: 535 TQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVT 594

Query: 301 YNTLISG--------HCNKGLLSLAM-KFKNL---MEKNGIQPNVITFNTLIFGFCKKGK 348
           Y+ +  G        +CN+ L    + KF ++   ME  GI P+ IT+NT+I   C+   
Sbjct: 595 YSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKH 654

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L  A  +F +MK+ N+ P   TYN LI+     G           + +  + +    Y  
Sbjct: 655 LSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTT 714

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I   C +G  + A  L   L       +   YSA+I   C R  +  +   +  M+  G
Sbjct: 715 VIKAHCVKGDPEMAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRG 774

Query: 469 CRPNKHIFEMLMST 482
             P+  I E+++ +
Sbjct: 775 ISPDLDICEVMIKS 788


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 180/357 (50%), Gaps = 11/357 (3%)

Query: 193 PLVFD--LLFKTYAHRKKFRNATDTFCQMRD---YGFLPIIESCNKFLSSLLDSERVDIA 247
           P VF   +L K      + + A +    M D    G  P + S    ++        D A
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              Y EM   RISP+V T + ++ A CK   +++A+EV   M   G +P+  TYN+++ G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C+      A+ F   M  +G++P+V+T+N+L+   CK G+  EA +IF  M    + P+
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           + TY TL+ GY   G      +L + M+RNGI  D   +N LI    K+ K  +A  +  
Sbjct: 336 IATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFS 395

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + ++ L PN  TY A+I   C   + + A   ++ MI  G  PN  ++  L+ + C  +
Sbjct: 396 KMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFD 455

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLH-HC--GKDELAMKLFRKMEIRGLLP 541
            +D+A E++LEML++ +  ++I  + +   +H HC  G+   + KLF  M   G+ P
Sbjct: 456 KWDKAEELILEMLDRGICLNTIFFNSI---IHSHCKEGRVIESEKLFDLMVRIGVKP 509



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 164/330 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     SE+   A+GF K+MR + + P+V T N +M 
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P + TY TL+ G+  KG L       +LM +NGI P
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHP 369

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN LI  + K+ K+ EA  +FS+M+   ++PNVVTY  +I    + G+ +     +
Sbjct: 370 DHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYF 429

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+  +I+ Y +LI  LC   K  KA  L+ ++    +  N   ++++I   C  
Sbjct: 430 EQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKE 489

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +PN   +  L+  +C     D A ++L  M    M PD +  
Sbjct: 490 GRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTY 549

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G     + + A+ LF++M   G+ P
Sbjct: 550 NTLINGYCRVSRMDDALALFKEMVSSGVSP 579



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 167/313 (53%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   YA ++K   A   F +MR +G  P + +    +  L  S  VD A+ ++++M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++PN+     ++H+ C     ++A E+   M   G   +   +N++I  HC +G +
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++PNVIT++TLI G+C  GK+ EA ++ S M +  + P+ VTYNTL
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY +V   +   +L++EM+ +G+  +I+TYN ++ GL    +T  A  L   + K+  
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGT 612

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 613 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKD 672

Query: 495 VLLEMLEKCMAPD 507
           +   +    + PD
Sbjct: 673 LFAALSANGLVPD 685



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 6/380 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FDS+  + R  +     +  L + YA +            M   G  P     N  + 
Sbjct: 322 KIFDSM--TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILIC 379

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +    E+VD A+  + +MR++ ++PNV T   V+   CK G ++ A+  F+ M   G  P
Sbjct: 380 AYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTP 439

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  Y +LI   C       A +    M   GI  N I FN++I   CK+G++ E+ ++F
Sbjct: 440 NIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLF 499

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    V PNV+TY+TLI+GY   G  +    L   M   G+K D +TYN LI G C+ 
Sbjct: 500 DLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRV 559

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +   A  L K++  + + PN  TY+ ++ G    + +  A +LY  + +SG +     +
Sbjct: 560 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTY 619

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +++   C+N   D A  +   +    +  ++   + +   L   G+++ A  LF  +  
Sbjct: 620 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679

Query: 537 RGLLPKGFDKLRTINCAPEN 556
            GL+P     +RT +   EN
Sbjct: 680 NGLVP----DVRTYSLMAEN 695



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 149/327 (45%), Gaps = 4/327 (1%)

Query: 180 DSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
           D++LY  +M D   +P  +V+  L  +     K+  A +   +M D G        N  +
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            S     RV  +   +  M R  + PNV T + ++  +C  G ++ A ++  +M S+G  
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   TYNTLI+G+C    +  A+     M  +G+ PN+IT+N ++ G     +   A  +
Sbjct: 544 PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKEL 603

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +  +  +     + TYN +++G  +   ++    +++ +    ++++  T+N +I  L K
Sbjct: 604 YVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLK 663

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+  +A  L   L  N LVP+  TYS +      +   E    L+ SM  +GC  N  +
Sbjct: 664 VGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRM 723

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEK 502
              ++    Q  D  RA   L  + EK
Sbjct: 724 LNSIVRKLLQRGDITRAGTYLSMIDEK 750



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 129/310 (41%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P+V TY  LI 
Sbjct: 38  FEELLRRGR-GASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYGILIG 95

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G +   ITF  L+ G C   +  +A              
Sbjct: 96  CCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCM 155

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +    +P+VV+Y T+ING+ + G+S+  
Sbjct: 156 PDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKA 215

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML   I  D++TY+++I  LCK     KA  ++  + KN ++PN  TY++++ G
Sbjct: 216 YSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHG 275

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C  +  + A    K M   G  P+   +  LM   C+N     A ++   M ++ + PD
Sbjct: 276 YCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPD 335

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 336 IATYCTLLQG 345



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 142/323 (43%), Gaps = 23/323 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
            ++ ++H L    K+  +E ++  +LD     L +  F+SI++S+    R+ +S  L FD
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDR-GICLNTIFFNSIIHSHCKEGRVIESEKL-FD 500

Query: 198 LLFKT---------------YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+ +                Y    K   AT     M   G  P   + N  ++      
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+D AL  +KEM  + +SPN+ T N+++           A E++  +   G    ++TYN
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            ++ G C   L   A++ F+NL   + +Q    TFN +I    K G+  EA  +F+ + A
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 679

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + P+V TY+ +     + G  E    L+  M  NG   +    N+++  L + G   +
Sbjct: 680 NGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITR 739

Query: 422 AAYLVKDLDKNSLVPNASTYSAL 444
           A   +  +D+      AST S L
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLL 762



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           A  V+P V TY  LI    + G  ++G +    +++ G +V+ +T+  L+ GLC + +T 
Sbjct: 80  AGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTS 139

Query: 421 KAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR---SGCRPNKHIF 476
            A  +V + + + S +P+  + + L+ G C    S+ A +L   M      G  P+   +
Sbjct: 140 DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSY 199

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             +++ F +  D D+A     EML++ ++PD +  S + + L      + AM++   M  
Sbjct: 200 TTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVK 259

Query: 537 RGLLP 541
            G++P
Sbjct: 260 NGVMP 264


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  167 bits (424), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 175/378 (46%), Gaps = 32/378 (8%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  +    A  K +      F  M   G    + S N  ++ L    R  IAL    +M 
Sbjct: 13  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+V T++ +++ FC+   +  A+++   ME MGF P V  YNT+I G C  GL++
Sbjct: 73  KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 132

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++  + ME++G++ + +T+N+L+ G C  G+  +A R+  +M   ++ PNV+T+  +I
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 192

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + + G       LYEEM R  +  D+ TYN+LI GLC  G+  +A  ++  +     +
Sbjct: 193 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 252

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG--------------------------- 468
           P+  TY+ LI G C  K  +   +L++ M + G                           
Sbjct: 253 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 312

Query: 469 -----CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
                 RPN   + +L+   C N   ++A  +   M +  +  D    + +  G+   G 
Sbjct: 313 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 372

Query: 524 DELAMKLFRKMEIRGLLP 541
            E A  LFR +  +GL P
Sbjct: 373 VEDAWDLFRSLSCKGLKP 390



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 165/313 (52%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP I   +K LS +  S+  D+ +  +  M    I  ++Y+ N+V++  C+      A+ 
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   M   G+ P V T ++LI+G C    +  A+   + ME+ G +P+V+ +NT+I G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K G +++A  +F  M+   V  + VTYN+L+ G    G     A L  +M+   I  +++
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T+ A+I    KEGK  +A  L +++ +  + P+  TY++LI G C+    + A Q+   M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +  GC P+   +  L++ FC+++  D   ++  EM ++ +  D+I  + +  G    G+ 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 525 ELAMKLFRKMEIR 537
           + A ++F +M+ R
Sbjct: 307 DAAQEIFSRMDSR 319



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 187/420 (44%), Gaps = 50/420 (11%)

Query: 162 ILRGILDSDSFDLPSKLFDSI--------LYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           +L  I  S ++DL   LF  +        LYSY          +++        +F  A 
Sbjct: 16  VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSY----------NIVINCLCRCSRFVIAL 65

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
               +M  +G+ P + + +  ++      RV  A+    +M      P+V   N ++   
Sbjct: 66  SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK+G++  AVE+F  ME  G      TYN+L++G C  G  S A +    M    I PNV
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           ITF  +I  F K+GK  EA +++ EM    V P+V TYN+LING    G  +    + + 
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV------------------ 435
           M+  G   D++TYN LI G CK  +  +   L +++ +  LV                  
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 436 --------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
                         PN  TYS L+ G C+    E+A  L+++M +S    +   + +++ 
Sbjct: 306 PDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIH 365

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  + + A ++   +  K + PD +  + + SG     + + +  L+RKM+  GLLP
Sbjct: 366 GMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 151/287 (52%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M ++R  P++   + V+    K    +  + +F +ME  G    + +YN +I+  C    
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
             +A+     M K G +P+V+T ++LI GFC+  ++ +A  + S+M+     P+VV YNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  ++G       L++ M R+G++ D +TYN+L+ GLC  G+   AA L++D+    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +VPN  T++A+I           A +LY+ M R    P+   +  L++  C +   D A 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           ++L  M+ K   PD +  + L +G     + +   KLFR+M  RGL+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLV 287



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 101/214 (47%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P+++ F+ ++    K         +F  M+   +  ++ +YN +IN   +     +  S+
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M++ G + D++T ++LI G C+  +   A  LV  +++    P+   Y+ +I G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                 A +L+  M R G R +   +  L++  C +  +  AA ++ +M+ + + P+ I 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            + +       GK   AMKL+ +M  R + P  F
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 221


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 172/349 (49%), Gaps = 6/349 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G   ++  D+   LFD +    R      + +  L +      +   A + F +M 
Sbjct: 15  SLIVGYCRTNQVDVARDLFDKM--PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 72

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P +      +  L ++ER +  L   + M+     P+      V+   C+    +
Sbjct: 73  Q----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A E+ + M   G  P V T   +I+ +C +G +S A++   LM+  G +PNV T+N L+
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC +GK+H+A  + ++M+A  V+P+ VTYN LI G    G+ E    L   M  +G+ 
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TYNALI  LCK+G+T +A  L   L+   + PNA T+++LI G C    ++ A++ 
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 308

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            + M+ +GC P+ + +   +   C+ +        + EML+K + P ++
Sbjct: 309 LEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTV 357



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/340 (25%), Positives = 163/340 (47%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
             +K + A +   +M + G  P + +C   +++     R+  AL   + M+     PNV+
Sbjct: 123 RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW 182

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N ++  FC  G + +A+ +   M + G  P   TYN LI G C  G +  A +   LM
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           E +G+  +  T+N LI   CK G+  +A  +F  ++   + PN VT+N+LING  + G +
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           ++     E+M+  G   D  TY++ I  LCK   +++    + ++ +  + P+   Y+ +
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 362

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I      +N     + +  M+ SGC P+   +   M  +C     + A  VL+EM +  +
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             D++  + L  G    G+ + A+ + ++M     +P  F
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 462



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 159/327 (48%), Gaps = 14/327 (4%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + N  +     + +VD+A   + +M     + +V +   ++   C+ G I+ A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCN-----KGLLSLAMKFKNLMEKNGIQPNVITFN 337
           VE+F  M+     P +  Y  L+ G CN     +GLL L       M++ G +P+   + 
Sbjct: 65  VELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLML-----RRMKELGWRPSTRAYA 115

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            ++   C++ K  EA  +  EM    ++P VVT   +IN Y + G       + E M   
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 175

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G K ++ TYNAL+ G C EGK  KA  L+  +    + P+A TY+ LI GQC+  + E A
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESA 235

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F+L + M   G   +++ +  L++  C++   D+A  +   +  + + P+++  + L +G
Sbjct: 236 FRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLING 295

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
           L   GK ++A K   KM   G  P  +
Sbjct: 296 LCKSGKADIAWKFLEKMVSAGCTPDTY 322



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 4/317 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y    +   A D F +M   GF   + S    +  L ++ R+D A+  + EM 
Sbjct: 13  FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD 72

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+++    ++   C     E  + + + M+ +G+ PS   Y  ++   C +    
Sbjct: 73  Q----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M + G+ P V+T   +I  +CK+G++ +A R+   MK     PNV TYN L+
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G+   G      +L  +M   G+  D +TYN LI G C +G  + A  L++ ++ + L+
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ALI   C    +++A  L+ S+   G +PN   F  L++  C++   D A + 
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 308

Query: 496 LLEMLEKCMAPDSIILS 512
           L +M+     PD+   S
Sbjct: 309 LEKMVSAGCTPDTYTYS 325



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFD 180
           +PS+     ++ V+    + RK K +E +L+ + +              +++    ++ D
Sbjct: 108 RPST---RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 164

Query: 181 SI----LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++    L   R C  +   ++ L + + +  K   A     +MR  G  P   + N  + 
Sbjct: 165 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIR 224

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  ++ A    + M  + +  + YT N +++A CK G  ++A  +F ++E+ G  P
Sbjct: 225 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 284

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+N+LI+G C  G   +A KF   M   G  P+  T+++ I   CK     E     
Sbjct: 285 NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 344

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM   +V P+ V Y  +I+   +  N  + A  + EM+ +G   D++TY   +   C E
Sbjct: 345 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 404

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+  +A  ++ ++ KN +  +   Y+ L+ G      ++ A  + K M      PN+  +
Sbjct: 405 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 464

Query: 477 EMLM 480
            +L+
Sbjct: 465 FILL 468



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 56/379 (14%)

Query: 213 TDTFCQMRD----YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           TD  C + D     G  P   + N  ++ L  S + DIA  F ++M     +P+ YT + 
Sbjct: 267 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSS 326

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
            +   CK+   +  +     M      PS   Y  +I     +    L  +    M  +G
Sbjct: 327 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 386

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             P+V+T+ T +  +C +G+L+EA  +  EM    V+ + + YNTL++G+  +G ++   
Sbjct: 387 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 446

Query: 389 SLYEEM---------------LRNGIKV----DIL------------------------- 404
           S+ ++M               LR+ +++    D+L                         
Sbjct: 447 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 506

Query: 405 --------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                   TY++++ G  ++G+T++A  LV  + ++S+  N   Y+AL+T  C  K    
Sbjct: 507 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 566

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A+ L  SMI+ G  P    ++ L+S        D+A E+ +    K  +PD I+   +  
Sbjct: 567 AWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 626

Query: 517 GLHHCGKDELAMKLFRKME 535
           GL   G  +++ ++   +E
Sbjct: 627 GLIKKGHSDISREMIIMLE 645



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/328 (18%), Positives = 135/328 (41%), Gaps = 38/328 (11%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS++    ++IV+H L K R                ++ L ++ +  ++ S   C+   
Sbjct: 353 KPSTVN---YTIVIHKLLKER----------------NYGLVARTWGEMVSS--GCNPDV 391

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +    + Y    +   A +   +M   G      + N  +       + D A+   K+
Sbjct: 392 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 451

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIE-----------RAVEV------FKNMESMGFIP 296
           M      PN +T  +++    ++ ++E           +A+E+      F  M+   F+P
Sbjct: 452 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 511

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  TY++++ G    G    A    +LM+++ I  N   +  L+  FCK  +  +A  + 
Sbjct: 512 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 571

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M      P +++Y  L++G    G ++    ++          D + +  +I GL K+
Sbjct: 572 CSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 631

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           G +  +  ++  L++ +  P+  TY+ L
Sbjct: 632 GHSDISREMIIMLERMNCRPSHQTYAML 659


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 168/325 (51%), Gaps = 4/325 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           ++D   +P   + N  +S L  +ER   A    +EM  +   P+++T   ++  FCK   
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-IQPNVITFN 337
            + A+ VF+ + + GF P V TY+ LI G C +G L  A+     M K+G   PN +T+N
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI GFC+ GK+ EA  +   M  T  SP+VVTY TL+NG+ ++   +    L  +M R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  +++T+ +L+ GLC+E +   A +++ ++ + S  P   TY+ ++ G C     E A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +    +    C PN   F +++   C+      A E++ E   +   PD ++ + +   
Sbjct: 285 RKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 518 LHHCGKDELAMKLFRKM-EIRGLLP 541
           L    K + A +++RKM E  G LP
Sbjct: 343 LCREKKVDEACRVYRKMLEEPGCLP 367



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 157/315 (49%), Gaps = 8/315 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  ++       L + ++YS   C      +  L   +   KK  +A   F Q+ 
Sbjct: 59  SLISGLCKAERASEAYDLLEEMVYS--GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 116

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGII 279
             GF P + + +  +  L    R+  A+  +  M +     PN  T N ++  FC++G +
Sbjct: 117 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 176

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + A+ + + M   G  P V TY TL++G C    L  A    N M + G+ PNV+TF +L
Sbjct: 177 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSL 236

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS-LYEEMLRNG 398
           + G C++ +L +A  I  EM+  + SP V TYNT+++GY +V   E     + EEM    
Sbjct: 237 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM---D 293

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              +++++N +I GLCK  ++ +A  LV++  +    P+   Y+ +I   C  K  + A 
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353

Query: 459 QLYKSMIRS-GCRPN 472
           ++Y+ M+   GC PN
Sbjct: 354 RVYRKMLEEPGCLPN 368



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 166/325 (51%), Gaps = 8/325 (2%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + ++ L       ++   A D   +M   G +P I +    ++    S++ D AL  +
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCN 310
           +++      P+V T + ++   CK G ++ A+++F  M +S   +P+  TYN+LISG C 
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 172

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G +  AM     M + G  P+V+T+ TL+ GFCK  +L +A  + ++M    ++PNVVT
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA-AYLVKDL 429
           + +L++G  +         +  EM R      + TYN ++ G C+  + ++A  ++++++
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
           D     PN  +++ +I G C    S  A +L +   R  C P+  ++  ++   C+ +  
Sbjct: 293 D---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 490 DRAAEVLLEMLEK--CMAPDSIILS 512
           D A  V  +MLE+  C+ P+SI  S
Sbjct: 350 DEACRVYRKMLEEPGCL-PNSITYS 373



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 40/189 (21%)

Query: 191 SSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           SSP  + +  L   +    +  +A D   QM   G  P + +    +  L    R+  A+
Sbjct: 191 SSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAV 250

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EMRR   SP VYT N ++  +C++  +E A +    +E M   P+V ++N +I G 
Sbjct: 251 HILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGL 308

Query: 309 CNKGLLSLAMK------------------------------------FKNLMEKNGIQPN 332
           C     S AM+                                    ++ ++E+ G  PN
Sbjct: 309 CKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPN 368

Query: 333 VITFNTLIF 341
            IT++T  +
Sbjct: 369 SITYSTFDY 377


>gi|307136214|gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 142/510 (27%), Positives = 233/510 (45%), Gaps = 40/510 (7%)

Query: 69  RTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFT 128
           + L  P  +D+ +  I   +L    WK L  +S  LT   V  V+ + +    L+LEF+ 
Sbjct: 22  KKLLSPSTEDIIYKAICV-NLKQRRWKFLEQVSPSLTNSLVCRVVREFRNSPQLALEFYN 80

Query: 129 WVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM 188
           WV+     S +LE+   ++H+L  +R F  + SI+  ++  +    P ++   ++ SY +
Sbjct: 81  WVEARDNFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKS-PLEVLGGLMNSYEI 139

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+S+P VFD L +T    K    A D   ++R  GF   I + N FL+ LL     D   
Sbjct: 140 CNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNNFLNLLLKLGETDKFW 199

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCK--------------------------------- 275
             Y EM  +  S NV T N++++A CK                                 
Sbjct: 200 NMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKA 259

Query: 276 --LGIIERAVEVFKNME--SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             +G ++ A+++ +N E  S G + P++ TYN +I+G C    L  A      M K GI 
Sbjct: 260 SKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGID 319

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            N  T+  LI G+ +KG L  A R+  EM  T + P+ V YN+LI      G  E  + L
Sbjct: 320 SNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFL 379

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
             +M+   I  D  TY+ L  GLC  G   KA  +   + + +LV +A T++ LI     
Sbjct: 380 LSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQ 439

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +N   A QL  SMI  G +P+   +  L++  C+    + A ++  + ++     + ++
Sbjct: 440 SRNIAGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVV 499

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + +  GL   G  + A  L  K++  G L
Sbjct: 500 YNSILDGLCKQGSIDAARLLVDKLQQNGFL 529



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/352 (23%), Positives = 166/352 (47%), Gaps = 9/352 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS----ERVDIALG 249
           + ++ +   +   ++  +A +   +M   G    I+S  +  + L+D       +D+A  
Sbjct: 288 VTYNCIINGFCKIRRLESAKNVLAEMIKLG----IDSNERTYAPLIDGYARKGSLDVAFR 343

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM   R+ P+    N +++     G +E A  +  +M +   +P   TY+ L  G C
Sbjct: 344 LCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLC 403

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L+ A++    + +  +  +  T N LI    +   +  A ++ S M    + P++V
Sbjct: 404 LSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVRGIKPDMV 463

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY TL+ G+ + G  E    +Y++ ++   K +++ YN+++ GLCK+G    A  LV  L
Sbjct: 464 TYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSIDAARLLVDKL 523

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            +N  + ++ TY+ L+ G CV    E+AF L+  MI  G   N   + ++++  C+    
Sbjct: 524 QQNGFL-DSVTYNTLLHGFCVNGEVEKAFALFLEMINVGSLVNIVSYNIMINFLCKMGLI 582

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +A E++  M  + + PD I  + L +        +  ++L   M ++G +P
Sbjct: 583 QQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIELHDYMVLKGAVP 634



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 153/342 (44%), Gaps = 4/342 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE-- 253
           F+L+        K   A      M      P + S N  +        +D+AL   +   
Sbjct: 217 FNLIIYALCKECKLLEAISVVYLMLKIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTE 276

Query: 254 -MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            +    +SPN+ T N +++ FCK+  +E A  V   M  +G   +  TY  LI G+  KG
Sbjct: 277 VISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKG 336

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L +A +  + M +  + P+ + +N+LI+    +G+L EA+ + S+M    + P+  TY+
Sbjct: 337 SLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDMINRRILPDEFTYS 396

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L  G    G+      ++  ++   +  D  T+N LI  + +      A  L+  +   
Sbjct: 397 ILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNIAGAKQLLSSMIVR 456

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + P+  TY  L+ G C     E A Q+Y   +++  + N  ++  ++   C+    D A
Sbjct: 457 GIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSILDGLCKQGSID-A 515

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           A +L++ L++    DS+  + L  G    G+ E A  LF +M
Sbjct: 516 ARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEM 557



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 96/386 (24%), Positives = 187/386 (48%), Gaps = 18/386 (4%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGI--LDSDSFDL 174
           + D  L L   T V +    S  + T++ +++   K R+ +S++++L  +  L  DS + 
Sbjct: 264 EMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIRRLESAKNVLAEMIKLGIDSNER 323

Query: 175 P-SKLFD------SILYSYRMCDS--------SPLVFDLLFKTYAHRKKFRNATDTFCQM 219
             + L D      S+  ++R+CD           +V++ L        +   A+     M
Sbjct: 324 TYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYNSLIYWLYIEGELEEASFLLSDM 383

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            +   LP   + +     L  S  ++ AL  +  +    +  + YT N++++   +   I
Sbjct: 384 INRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVERNLVKDAYTHNILINYMFQSRNI 443

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A ++  +M   G  P + TY TL++GHC +G +  A++  +   K   + N++ +N++
Sbjct: 444 AGAKQLLSSMIVRGIKPDMVTYGTLVAGHCKEGKIEAAVQIYDKTVKADGKSNLVVYNSI 503

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G CK+G + +A R+  +    N   + VTYNTL++G+   G  E   +L+ EM+  G 
Sbjct: 504 LDGLCKQGSI-DAARLLVDKLQQNGFLDSVTYNTLLHGFCVNGEVEKAFALFLEMINVGS 562

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
            V+I++YN +I  LCK G  ++A  L++ +    +VP+  TY+ LIT       S+   +
Sbjct: 563 LVNIVSYNIMINFLCKMGLIQQAMELMRAMASQGIVPDLITYTTLITNFVKSYGSDNVIE 622

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           L+  M+  G  P++  ++ L+S   Q
Sbjct: 623 LHDYMVLKGAVPDRQTYQSLVSPCLQ 648



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 33/367 (8%)

Query: 207 KKFRNATD------TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE-MRRNRI 259
           ++FRN+         + + RD  F   +ESC   +  L++S   + AL   +  M +N  
Sbjct: 66  REFRNSPQLALEFYNWVEARD-NFSHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGK 124

Query: 260 SP----------------NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           SP                N    + ++    +L  +E A +V + +   GF  ++  +N 
Sbjct: 125 SPLEVLGGLMNSYEICNSNPAVFDALVRTCTQLKSVEGAYDVIRKLRLEGFWVTIHAWNN 184

Query: 304 LISGHCNKGLLSLAMKFKNL---MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            ++     G      KF N+   M  +G   NV TFN +I+  CK+ KL EA  +   M 
Sbjct: 185 FLNLLLKLGETD---KFWNMYMEMVASGYSENVNTFNLIIYALCKECKLLEAISVVYLML 241

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYE--EMLRNG-IKVDILTYNALILGLCKEG 417
              + PNVV++N +I+   ++G  ++   L    E++  G +  +I+TYN +I G CK  
Sbjct: 242 KIEIWPNVVSFNMIIDKASKMGEMDLALKLTRNTEVISGGSVSPNIVTYNCIINGFCKIR 301

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           + + A  ++ ++ K  +  N  TY+ LI G   + + + AF+L   M+ +   P+  ++ 
Sbjct: 302 RLESAKNVLAEMIKLGIDSNERTYAPLIDGYARKGSLDVAFRLCDEMVETRLIPDTVVYN 361

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+       + + A+ +L +M+ + + PD    S L  GL   G    A+++   +  R
Sbjct: 362 SLIYWLYIEGELEEASFLLSDMINRRILPDEFTYSILTKGLCLSGHLNKALRVHYYIVER 421

Query: 538 GLLPKGF 544
            L+   +
Sbjct: 422 NLVKDAY 428


>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Brachypodium distachyon]
          Length = 547

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/510 (25%), Positives = 224/510 (43%), Gaps = 73/510 (14%)

Query: 46  TFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSD-----WKKLTAL 100
           T   P+ + + + +++    +P      P G D+  V      ++ S         L AL
Sbjct: 63  TAAGPAAATHELSVDQQFTVVPGTDGDGP-GSDVSEVAERVCRVVSSQPEPRIASALDAL 121

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
             +++P  V  VL  +    +L+L FF W +  +    T E+   ++  L K ++F+   
Sbjct: 122 GVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGKIKQFRLVW 181

Query: 161 SIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           S++     RG+L  D+F L                        + + YA  +K + A +T
Sbjct: 182 SLVEAMRCRGLLSKDTFRL------------------------IVRRYARARKVKEAVET 217

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M  +G    +   N  +  L  S++V  A                       HA   
Sbjct: 218 FEKMSSFGLKADLSDYNWLIDVLSKSKQVKKA-----------------------HA--- 251

Query: 276 LGIIERAVEVFKNMESMG-FIPSVTTYNTLISGHCN-KGLLSLAMKFKNLMEKNGIQPNV 333
                    +FK M+  G F+P + TY  L+ G  + K LL L   ++ +++  GI+P+V
Sbjct: 252 ---------IFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDA-GIKPDV 301

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           + + TLI  FCK GK  EA ++F EM+A    P+   Y  LING G     +     +E 
Sbjct: 302 VAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFEL 361

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
              +G  +++ T NA++   C+  K + A  +V ++ K  + PNA TY  ++      + 
Sbjct: 362 SKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQK 421

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E A+ +++ M   GC P  + + M++  FC NE  D A +V  +M EK + P   + S 
Sbjct: 422 IEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSS 481

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           L +GL    + E A   F++M  +G+ P G
Sbjct: 482 LINGLCFENRLEEACVYFQEMLDKGIRPPG 511



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 77/165 (46%)

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    KF++A     +MR  G  P   + +  L  L+ S++++ A   ++ M      P
Sbjct: 380 AYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEP 439

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
            + T  M++  FC    ++ A++V+K M+  G +P +  +++LI+G C +  L  A  + 
Sbjct: 440 QLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYF 499

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             M   GI+P    F+ L     + G++  A  +  ++     +P
Sbjct: 500 QEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKTP 544


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 175/378 (46%), Gaps = 38/378 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           + +T    K+ + A + F QM   GF P   + N  +  L  +     AL     M    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P   T  +++++ CK G +ERA E+F+ M + GF P+   Y +LI G    G +  A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+VIT   +I G CK G   +A + F EM      PNVVTY T+I G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++G       + + M+ +G   D +TY  L+ G CK G+  +AA L+ +LDK S  PN 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 439 STYSALITGQCVRKNSER------------------------------------AFQLYK 462
             YS+L+ G C   + E+                                    A ++++
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQ 530

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNED--FDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            M+  GC+P+   + +L++  C++ +   +RA  +L ++ +    PD++  + L  GL  
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCK 590

Query: 521 CGKDELAMKLFRKMEIRG 538
            G+ + A+K+  +   RG
Sbjct: 591 IGEVDRAVKMLEEASSRG 608



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 161/345 (46%), Gaps = 38/345 (11%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   S N  + S   + R D A+  ++ M+R R  P+++T  +++   CK G
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203

Query: 278 IIERAVEVFKNMESMGFI------------------------------------PSVTTY 301
           + E+A EVF  M +MGF+                                    P    Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NT+I G    G    A+K  + M      P  +T+  L+   CK G L  A  +F  M A
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +   PN V Y +LI+G+ + G  +   SL++EM+  G + D++T+  +I GLCK G  ++
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           AA   +++ +    PN  TY+ +I G         AF++ K MI  GC P+   +  L+ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 482 TFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDE 525
            FC+    D AA+ LL+ L+KC  +P+  + S L +GL   G  E
Sbjct: 444 GFCKLGRLDEAAQ-LLDELDKCSSSPNLQLYSSLVNGLCDGGSVE 487



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 5/368 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+ D++L   + C  + + + +L  +         A + F  M   GF P        + 
Sbjct: 281 KVLDNMLA--KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               S R+  A   + EM      P+V T  +++   CK G  E+A + F+ M   G  P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TY T+I G    G ++ A +    M  +G  P+ +T+  L+ GFCK G+L EA ++ 
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMG-ASLYEEMLRNGIKVDILTYNALILGLCK 415
            E+   + SPN+  Y++L+NG    G+ E     L+E+       +D     ++I+GLCK
Sbjct: 459 DELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCK 518

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC-VRKNS-ERAFQLYKSMIRSGCRPNK 473
            G+  +A  + + +      P+A+TY+ LI G C  R+N  ERAF L   + + G  P+ 
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDA 578

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L    C+  + DRA ++L E   +    D +  + L +GL + G+ + A+ LF++
Sbjct: 579 VTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQE 638

Query: 534 MEIRGLLP 541
           M  +G  P
Sbjct: 639 MVRQGGAP 646



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 3/306 (0%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--GIIERAVEVFKN 288
           C   +  L  + R+D A   ++ M      P+  T N++++  C+     +ERA  +  +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +E +G++P   TY  L  G C  G +  A+K        G   +V+ +  L  G C +G+
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A  +F EM     +P+   Y  +ING  +V   E     ++EM+  G K  + TY A
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 409 LILGLCKEGKTKKAAYLVKD-LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           L+  LC  G   +A +  +  L +  LV +   Y ALI G C     + A +L++ MI  
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P       L     ++   ++A E+L EM      P +   + +  GL    +    
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808

Query: 528 MKLFRK 533
           +KL ++
Sbjct: 809 LKLVQE 814



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 36/258 (13%)

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F+   E+ G Q +V T+N L+     +    +   I  EM    ++PN  ++N LI  + 
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG---------------------- 417
           +   ++   + +E M R   K D+ T+  L+  LCK G                      
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225

Query: 418 --------------KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
                         + K+A  +   ++K    P+A  Y+ +I G     +++ A ++  +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+   C P +  + +L+++ C+    +RA E+   M      P+S+I + L  G    G+
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 524 DELAMKLFRKMEIRGLLP 541
            + A  LF +M   G  P
Sbjct: 346 MKEACSLFDEMVEAGYRP 363


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 185/387 (47%), Gaps = 8/387 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++++G+  S   D    +   ++ S   C  + +++  L KT+    +F +A     +M+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I   N  +  L  ++R+D A  F  EM  N + PN +T    +  + +     
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A +  K M   G +P+      LI+ +C K  +  A      M   GI  +  T+  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K  K+ +A  IF EM+   ++P+V +Y  LING+ ++GN +  +S+++EM+  G+ 
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++ YN L+ G C+ G+ +KA  L+ ++    L PNA TY  +I G C   +   AF+L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  M   G  P+  ++  L+   C+  D +RA  +     + C A  +   + L + +  
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC-ASSTAPFNALINWVFK 778

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKL 547
            GK EL  ++  +     L+   FD+ 
Sbjct: 779 FGKTELKTEVLNR-----LMDGSFDRF 800



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 210/499 (42%), Gaps = 60/499 (12%)

Query: 89  LIHSDWKKL---TALSTHLTPFRVKHVLL-KVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
           L   +W+     + LS  + P  V  VL  K   D    L FF WV + K +   L++ S
Sbjct: 42  LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLP-SKLFDSIL---YSYRMCDSSPLVFDLLF 200
            +   L     F+ + S++  +++ +    P ++++ SI+     +       ++F +LF
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERN---WPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             Y  +     A   F        +P +  C   L +LL   R+D+    YK M    + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
            +V T +M++ A C+ G ++   +V    E         T    + G         A+K 
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFRTATLNVDG---------ALKL 264

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           K  M   G+ P   T++ LI G CK  +L +A  +  EM +  VS +  TY+ LI+G  +
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
             N++    L  EM+ +GI +    Y+  I  + KEG  +KA  L   +  + L+P A  
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 441 YSALITGQCVRKNSERAFQL-----------------------------------YKSMI 465
           Y++LI G C  KN  + ++L                                    K MI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            SGCRPN  I+  L+ TF QN  F  A  VL EM E+ +APD    + L  GL    + +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 526 LAMKLFRKMEIRGLLPKGF 544
            A     +M   GL P  F
Sbjct: 505 EARSFLVEMVENGLKPNAF 523



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 183/408 (44%), Gaps = 45/408 (11%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y  ++K   A   +  M D G L   ++    ++ L  +++VD A   ++EMR   
Sbjct: 563 LINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           I+P+V++  ++++ F KLG +++A  +F  M   G  P+V  YN L+ G C  G +  A 
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  + M   G+ PN +T+ T+I G+CK G L EA R+F EMK   + P+   Y TL++G 
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742

Query: 379 GQVGNSEMGASLYE---------------------EMLRNGIKVDIL------------- 404
            ++ + E   +++                      +  +  +K ++L             
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802

Query: 405 ----TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TYN +I  LCKEG  + A  L   +   +L+P   TY++L+ G          F +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS-----ELY 515
           +   I +G  P+  ++ ++++ F +     +A  ++ +M  K    D   LS      L 
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPENGEKES 561
           SG    G+ E+A K+   M     +P     +  IN  C   N   E+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 165/367 (44%), Gaps = 2/367 (0%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD ++ S  +  +    +  L + Y   K  R   +   +M+    +    +    +  
Sbjct: 369 LFDGMIASGLIPQAQA--YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           +  S  +D A    KEM  +   PNV     ++  F +      A+ V K M+  G  P 
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           +  YN+LI G      +  A  F   M +NG++PN  T+   I G+ +  +   A++   
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM+   V PN V    LIN Y +        S Y  M+  GI  D  TY  L+ GL K  
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           K   A  + +++    + P+  +Y  LI G     N ++A  ++  M+  G  PN  I+ 
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
           ML+  FC++ + ++A E+L EM  K + P+++    +  G    G    A +LF +M+++
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726

Query: 538 GLLPKGF 544
           GL+P  F
Sbjct: 727 GLVPDSF 733



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 165/358 (46%), Gaps = 4/358 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +D+L       K+  +A     +M   G      + +  +  LL     D A G   EM 
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + I+   Y  +  +    K G++E+A  +F  M + G IP    Y +LI G+C +  + 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +    M+K  I  +  T+ T++ G C  G L  A  I  EM A+   PNVV Y TLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 376 NGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             + Q  NS  G ++   +EM   GI  DI  YN+LI+GL K  +  +A   + ++ +N 
Sbjct: 460 KTFLQ--NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L PNA TY A I+G         A +  K M   G  PNK +   L++ +C+ E    A 
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEAC 577

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
                M+++ +  D+   + L +GL    K + A ++FR+M  +G+ P  F     IN
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 61/387 (15%)

Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
           +T++++++ L KN K   +E I R        ++  K     ++SY           +L 
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFR--------EMRGKGIAPDVFSY----------GVLI 634

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             ++     + A+  F +M + G  P +   N  L     S  ++ A     EM    + 
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----------- 309
           PN  T   ++  +CK G +  A  +F  M+  G +P    Y TL+ G C           
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 310 ---NK-----------GLLSLAMKFKNLMEKNGI-------------QPNVITFNTLIFG 342
              NK            L++   KF     K  +             +PN +T+N +I  
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK+G L  A  +F +M+  N+ P V+TY +L+NGY ++G       +++E +  GI+ D
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA-----STYSALITGQCVRKNSERA 457
            + Y+ +I    KEG T KA  LV  +   + V +      ST  AL++G       E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFC 484
            ++ ++M+R    P+      L++  C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 167/360 (46%), Gaps = 35/360 (9%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C++ D G +P + + N  +  L  +ER D A   +KEM    + PN  T  +++HA CK 
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL---------------------- 314
           G+IE A+ +F  M   G   +V  YN+LI+G+C +G L                      
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 315 -------------SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
                        S AM+    M + GI  N  TF  LI GFCK  K+ EA R+F +M  
Sbjct: 447 SPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +NV PN VT+N +I GY  VGN      LY++M+  G+K D  TY +LI GLC      K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   V DL+ +  V N  + +AL+ G          + L+  M   G + +   F +++ 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +  D +++  +  EM E+ + PD I  + +   L        A+  + +M I G  P
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSP 686



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 179/387 (46%), Gaps = 2/387 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  IL  ++    F L   LFD +L S    D    V+    + Y   +    A     
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDE--YVYTAGIRAYCESRNLDGARGLVV 222

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G        N  +  L  + RV  A+     M    ++ +  T   +++ FC++ 
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+ +  +M  +GF+PS    + +I     K L+  A      +   G+ PNV  +N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +  +A+R+F EM    + PN VTY  LI+   + G  E    L+++M   
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIKV +  YN+LI G CK+G   +A  L+  + K  L P A++YS LI G C   +   A
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSA 462

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L++ M   G   N + F  L++ FC+++  D AA +  +M++  + P+ +  + +  G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G    A +L+ +M   GL P  +
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNY 549



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 165/349 (47%), Gaps = 13/349 (3%)

Query: 204 AHRKKFRNATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERVDIALGF 250
           A    +R     FC+M +              GF+P   +C+  +  L   E V+ A   
Sbjct: 266 ADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++    + PNV+  N ++   CK    + A  +FK M   G  P+  TY  LI   C 
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G++  A+   + M   GI+  V  +N+LI G+CK+G L  A  + S M    ++P   +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ LI G  + G+      L+ EM   GI  +  T+ ALI G CK+ K  +AA L   + 
Sbjct: 446 YSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            ++++PN  T++ +I G C+  N  +AFQLY  M+  G +P+ + +  L+S  C      
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +A E + ++       ++  L+ L  GL   G+      L+ +M +RG+
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGV 614



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 172/397 (43%), Gaps = 46/397 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTF 216
           +++ G       D  ++LFD      +M DS+     + F+++ + Y      R A   +
Sbjct: 483 ALINGFCKDKKMDEAARLFD------KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 217 CQMRDYGFLPI----------------IESCNKFLSSLLDSERV-------DIALGFYKE 253
            QM + G  P                 +   N+F++ L +S  V        +  G ++E
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE 596

Query: 254 MRRNR------------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R               +  ++ +  ++++A  K    E++  +F+ M+  G  P    Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             +I     +  +  A+   + M  +G  PN +T   LI   CK G L  A  +  EM A
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            NV PN  TYN  ++ +   G+ E    L+  ML+ G    I+++N LI GLCK GK ++
Sbjct: 717 GNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQE 775

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L++ + ++   P+  +YS +I   C   +  +AF+L+  M+  G +P+   + + + 
Sbjct: 776 AIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIR 835

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
               + + D+A  +   M+   + P+      L SG+
Sbjct: 836 WCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 3/309 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++     +++D A   + +M  + + PN  T N+++  +C +G I +A +++  M  MG
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY +LISG C    +S A +F   +E +    N  +   L++G  ++G+  E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETY 603

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++ EM    V  ++V++  ++    +  + E    L+ EM   G+K D + Y  +I  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            KE    +A      +  +   PN  T++ LI   C       A  L K M+     PNK
Sbjct: 664 SKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII-LSELYSGLHHCGKDELAMKLFR 532
             +   +  F    D ++A ++   ML+  +A  SI+  + L  GL   GK + A+ L R
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMR 781

Query: 533 KMEIRGLLP 541
           K+   G  P
Sbjct: 782 KITESGFSP 790



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/366 (21%), Positives = 165/366 (45%), Gaps = 18/366 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L K           RG+++ D+  L  K+ D      +    +   ++ L  
Sbjct: 375 TYAILIHALCK-----------RGMIE-DALCLFDKMRD------KGIKVTVYPYNSLIN 416

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y  +     A      M   G  P   S +  ++ L  +  +  A+  ++EM    I+ 
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAW 476

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT   +++ FCK   ++ A  +F  M     IP+  T+N +I G+C  G +  A +  
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P+  T+ +LI G C    + +AN   ++++ +    N  +   L+ G  + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFRE 596

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L++EM   G+K+D++++  ++    K+   +K+  L +++ +  + P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I      +N  +A   +  M+  G  PN     +L++  C++     A  +  EML 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 502 KCMAPD 507
             + P+
Sbjct: 717 GNVLPN 722



 Score = 45.1 bits (105), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 41/185 (22%), Positives = 81/185 (43%), Gaps = 22/185 (11%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD----------- 190
           TH+++++ L K+    S+E + + +L  +   LP+K   +    Y   +           
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNV--LPNKFTYNCFLDYFATEGDMEKAKDLHS 747

Query: 191 -------SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                  +S + F++L K      K + A D   ++ + GF P   S +  +  L     
Sbjct: 748 AMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGD 807

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL-GIIERAVEVFKNMESMGFIPSVTTYN 302
           ++ A   + EM    + P+V   N+ +  +C + G  ++A+ ++ NM   G  P+  TY 
Sbjct: 808 INKAFELWNEMLYKGLKPDVVAYNIFIR-WCNVHGESDKALGIYTNMIRSGVQPNWDTYR 866

Query: 303 TLISG 307
            L+SG
Sbjct: 867 ALLSG 871


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 158/339 (46%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            LP + + N    +         AL   +EMR   +   + T N+V+   CK G +E A+
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
                M   G  P V TYNTLI  HC  G ++ A    + M + G++ +  T NT+++  
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           CK+ +  EA  +          P+ V+Y T++  Y +  NSE    L++EM+   +   I
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            TYN LI GL + G+ K+A   + +L +  LVP+ +TY+ +I   C   + E AFQ +  
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+ +  +P+      LM+  C N   D+A ++    +EK    D I  + L   +   G 
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640

Query: 524 DELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            + A+  F  ME RGL P  F     ++   E G  E  
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEA 679



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 186/415 (44%), Gaps = 71/415 (17%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            F+LL  T+  +    +A  T   M+ +G  P   + N  L++      +  A      M
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 265

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +++ ++P   T N ++ A+ +LG I++A +V + M + GF P + TYN L +G C  G +
Sbjct: 266 KKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKV 325

Query: 315 SLAMKFKNLMEKNG-IQPNVITFNTL---------------------------------- 339
             A + K+ ME+ G + P+V+T+NTL                                  
Sbjct: 326 DEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385

Query: 340 -IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            I G CK G+L  A    ++M    ++P+V+TYNTLI+ + + GN     +L +EM+R G
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +K+D  T N ++  LCKE + ++A  L++   +   +P+  +Y  ++       NSE A 
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL 505

Query: 459 QLYKSMI-----------------------------------RSGCRPNKHIFEMLMSTF 483
           +L+  MI                                     G  P+   + +++  +
Sbjct: 506 RLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAY 565

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           C+  D + A +   +M+E    PD +  + L +GL   GK + A+KLF     +G
Sbjct: 566 CKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKG 620



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 38/354 (10%)

Query: 226 PIIESCNKFLSSLLDSERV--DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           P +++ N  LS+L  S       +L  ++ +   R+ PN YT N+++H  C  G +  A+
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLS---------------------------- 315
                M+  G  P   TYNTL++ HC KG+L                             
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 316 -------LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPN 367
                   A K    M  NG +P++ T+N L  G C+ GK+ EA R+  EM +   + P+
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTYNTL +   +   S     L EEM   G+K  ++T+N +I GLCK+G+ + A   + 
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLN 404

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +  + L P+  TY+ LI   C   N  +A+ L   M+R G + +      ++   C+ +
Sbjct: 405 KMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEK 464

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            ++ A  +L    ++   PD +    + +        E A++L+ +M  + L P
Sbjct: 465 RYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP 518



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 160/315 (50%), Gaps = 6/315 (1%)

Query: 255 RRNRISPNVYTLNMVMHAFCKLGII--ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           RR R+ P++   N V+ A  +      + +++ F+++ ++   P+  T+N L+  HC+KG
Sbjct: 159 RRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKG 218

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L+ A+   + M+  G+ P+ +T+NTL+   C+KG L EA  + + MK   V+P   TYN
Sbjct: 219 TLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYN 278

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK- 431
           TL++ Y ++G  +    + E M  NG + D+ TYN L  GLC+ GK  +A  L  ++++ 
Sbjct: 279 TLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERL 338

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            +L+P+  TY+ L       + S  A +L + M   G +       +++   C++ + + 
Sbjct: 339 GTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEG 398

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI- 550
           A   L +M +  +APD I  + L       G    A  L  +M  RGL    F  L T+ 
Sbjct: 399 ALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTF-TLNTVL 457

Query: 551 -NCAPENGEKESGGL 564
            N   E   +E+ GL
Sbjct: 458 YNLCKEKRYEEAQGL 472



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 184/402 (45%), Gaps = 20/402 (4%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           TL TH+IV+  L K+ + + +   L  + D D        ++++++++    +    + L
Sbjct: 379 TLVTHNIVIKGLCKDGELEGALGCLNKMAD-DGLAPDVITYNTLIHAHCKAGNIAKAYTL 437

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           + +      K     DTF             + N  L +L   +R + A G  +   +  
Sbjct: 438 MDEMVRRGLKL----DTF-------------TLNTVLYNLCKEKRYEEAQGLLQSPPQRG 480

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+  +   VM A+ K    E A+ ++  M      PS++TYNTLI G    G L  A+
Sbjct: 481 FMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAI 540

Query: 319 -KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
            K   LMEK G+ P+  T+N +I  +CK+G L  A +  ++M   +  P+VVT NTL+NG
Sbjct: 541 DKLNELMEK-GLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNG 599

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
               G  +    L+E  +  G KVD++TYN LI  +CK+G    A +   D++   L P+
Sbjct: 600 LCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPD 659

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           A TY+ +++       +E A  +   +  SG         +L  +     +  + A+   
Sbjct: 660 AFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEE 719

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           E +E      S   ++L +GL   G+ + A  +  +M  +G+
Sbjct: 720 ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGM 761



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 155/355 (43%), Gaps = 61/355 (17%)

Query: 138 LTLETHSI--VLHILTKNRKFKSSESILRGILDSDSFDLPSKLF--DSILYSYRMCDSSP 193
           L L+T ++  VL+ L K ++++ ++ +L+          P + F  D + Y   M     
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSP--------PQRGFMPDEVSYGTVMA---- 493

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
                 FK Y      R     + +M +    P I + N  +  L    R+  A+    E
Sbjct: 494 ----AYFKEYNSEPALR----LWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNE 545

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    + P+  T N+++HA+CK G +E A +    M    F P V T NTL++G C  G 
Sbjct: 546 LMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGK 605

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L  A+K F++ +EK G + +VIT+NTLI   CK G +  A   F++M+A  + P+  TYN
Sbjct: 606 LDKALKLFESWVEK-GKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYN 664

Query: 373 TLINGYGQVGNSEMG-----------------------------------ASLYEEMLRN 397
            +++   + G +E                                     A   EE + N
Sbjct: 665 VVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVEN 724

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
                   Y  L+ GLC  G+ K+A  ++ ++ +  +  ++STY  L+ G   R+
Sbjct: 725 PQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQ 779


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 163/338 (48%), Gaps = 4/338 (1%)

Query: 205 HRKKFR-NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
            +++FR N T      +DY F     +  K L+    S + D +L F + M      P+V
Sbjct: 55  EQQQFRVNETKPTKHDQDYDFRDT--NFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDV 112

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
                ++  F  +  IE+A++V + +E  G  P V  YN +ISG C    +  A K  + 
Sbjct: 113 ILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDR 171

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M+K G +P+V+T+N LI  FC +G+L  A R+  ++   N  P V+TY  LI      G 
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGG 231

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +    L +EML  G++ D  TYN ++ G+CKEG   +A   +  + KN  V   STY+ 
Sbjct: 232 IDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNI 291

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           L+         E   +L   M+  GC PN   +  L++  C++   D A  VL  M EK 
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKA 351

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +APD      L S L   GK +LA++    M   G LP
Sbjct: 352 LAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLP 389



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 191/400 (47%), Gaps = 7/400 (1%)

Query: 146 VLHILTKNRK--FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
           V+ IL K+ K    +  +++ G   +D  D  SK+ D +    R  +   + +++L   +
Sbjct: 134 VMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRM--KKRGFEPDVVTYNILIGNF 191

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
             R +   A     Q+      P + +    + + +    +D A+    EM    + P+ 
Sbjct: 192 CGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDR 251

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
           YT N+V++  CK G+++RA E    +   G +  V+TYN L+    N+G      K  + 
Sbjct: 252 YTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSD 311

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G +PN IT++TLI   C+ GK+ EA  +   MK   ++P+  +Y+ LI+   + G 
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            ++     ++M+  G   DIL+YN+++  LCK G   +A  + + L +    PNA +Y+ 
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNT 431

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML--E 501
           L        +  RA  +   M+ +G  P++  +  L+S  C++   D+A E+L++M   E
Sbjct: 432 LFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESE 491

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           KC  P  I  + +  GL    +   A+++   M   G LP
Sbjct: 492 KCQ-PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLP 530



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/324 (28%), Positives = 156/324 (48%), Gaps = 1/324 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M + G+ P +  C K +    + ++++ A+   + + ++   P+V+  N V+  FCK  
Sbjct: 102 HMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKAD 160

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A +V   M+  GF P V TYN LI   C +G L LA++  + + K+  +P VIT+ 
Sbjct: 161 RVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYT 220

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI     +G + EA ++  EM +  + P+  TYN ++NG  + G  +        + +N
Sbjct: 221 ILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKN 280

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G    + TYN L+  L  EGK +    L+ D+      PN  TYS LIT  C     + A
Sbjct: 281 GCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEA 340

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             + K M      P+ + ++ L+S  C+    D A E L +M+     PD +  + + + 
Sbjct: 341 KNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILAS 400

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G  + A+ +F K+   G  P
Sbjct: 401 LCKNGNADEALNIFEKLGEVGCPP 424



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 165/359 (45%), Gaps = 1/359 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L K + + KK   A      +  +G  P + + N  +S    ++RVD A      M++  
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRG 176

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P+V T N+++  FC  G ++ A+ V   +      P+V TY  LI     +G +  AM
Sbjct: 177 FEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAM 236

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K  + M   G++P+  T+N ++ G CK+G L  A    S +        V TYN L+   
Sbjct: 237 KLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDL 296

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              G  E G  L  +ML  G + + +TY+ LI  LC++GK  +A  ++K + + +L P+ 
Sbjct: 297 LNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            +Y  LI+  C     + A +    MI  G  P+   +  ++++ C+N + D A  +  +
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           + E    P++   + L+  L   G    A+ +  +M   G+ P        I+C   +G
Sbjct: 417 LGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 1/260 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +  + + N  L  LL+  + +       +M      PN  T + ++ A C+ G I+ A
Sbjct: 281 GCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEA 340

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             V K M+     P   +Y+ LIS  C +G + LA++F + M   G  P+++++N+++  
Sbjct: 341 KNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILAS 400

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G   EA  IF ++      PN  +YNTL       G+      +  EML NGI  D
Sbjct: 401 LCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPD 460

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            +TYN+LI  LC++G   +A  L+ D+ +     P   +Y+ ++ G C  +    A ++ 
Sbjct: 461 EITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVL 520

Query: 462 KSMIRSGCRPNKHIFEMLMS 481
            +M+  GC PN+  + +L+ 
Sbjct: 521 AAMVNEGCLPNETTYTLLIQ 540



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 3/253 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +LR +L+   ++   KL   +L   + C+ +P+ +  L        K   A +    M++
Sbjct: 292 LLRDLLNEGKWEYGEKLMSDMLV--KGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKE 349

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P   S +  +S+L    +VD+A+ F  +M      P++ + N ++ + CK G  + 
Sbjct: 350 KALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADE 409

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+ +F+ +  +G  P+  +YNTL     + G    A+     M  NGI P+ IT+N+LI 
Sbjct: 410 ALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLIS 469

Query: 342 GFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             C+ G + +A  +  +M ++    P V++YNT++ G  +V        +   M+  G  
Sbjct: 470 CLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCL 529

Query: 401 VDILTYNALILGL 413
            +  TY  LI G+
Sbjct: 530 PNETTYTLLIQGI 542



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 3/196 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S + ++  +      DL  +  D ++    + D   L ++ +  +         A + F 
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDI--LSYNSILASLCKNGNADEALNIFE 415

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++ + G  P   S N    +L  S     ALG   EM  N I P+  T N ++   C+ G
Sbjct: 416 KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475

Query: 278 IIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           ++++A+E+  +M ES    P+V +YNT++ G C    +  A++    M   G  PN  T+
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTY 535

Query: 337 NTLIFGFCKKGKLHEA 352
             LI G    G  ++A
Sbjct: 536 TLLIQGIGFAGWRYDA 551



 Score = 47.0 bits (110), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 1/108 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKL 276
           +M   G  P   + N  +S L     VD A+    +M    +  P V + N V+   CK+
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKV 510

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             I  A+EV   M + G +P+ TTY  LI G    G    AM+  NL+
Sbjct: 511 QRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLL 558


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 177/374 (47%), Gaps = 36/374 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+++ K   + K +++A   F +M D G +P   + N  +  L    ++  AL  +++M 
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMN 413

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P + T + ++  +C  G ++ AV+++  M   GF P+V TY TL+ GH NK    
Sbjct: 414 ETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFD 473

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFC------------------------------- 344
            A      M++NG+  N  T+NTLI G C                               
Sbjct: 474 KAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSII 533

Query: 345 ----KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               K G +  A  ++ +M A  + PN+VTY + I+GY +    ++   +  ++   G++
Sbjct: 534 NGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLR 593

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI  YN+LI G C+EG    A  ++  + K+ L+PN S Y++ ITG    K  E A +L
Sbjct: 594 PDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRL 653

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           Y+ MI+ G   +   +  L+  F ++ +   A ++  EM+ K   PD I  + L  GL  
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713

Query: 521 CGKDELAMKLFRKM 534
            G  + A KL  +M
Sbjct: 714 NGDIDDARKLLDEM 727



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 54/418 (12%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L + RK +            ++ +L  K+ ++ +  Y       + +  L  
Sbjct: 388 TYNILIHWLCQRRKIR------------EALNLWEKMNETGVKPY------IVTYHSLLL 429

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y        A   + +M   GF P + +    +   ++    D A     EM++N +S 
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH------------- 308
           N YT N +++  C +G +    E+ K  E+ GF+P+  TYN++I+G              
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 309 ---CNKGL-------------------LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
              C KG+                     LA+K  N +   G++P++  +N+LIFGFC++
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQE 609

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           G +  A ++   M    + PN+  YN+ I GY  +   E    LYE+M++ GI +D  TY
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATY 669

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             LI G  K+G    A  L  ++     +P+  T++AL  G C   + + A +L   M R
Sbjct: 670 TTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNR 729

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              RPN  ++ ML++ + +N     A  +  EMLE+ + PD     ++  G+   G D
Sbjct: 730 LDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTY-DILVGMKSLGSD 786



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 5/291 (1%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EMR      + +  ++VM A  K G+ + AV +F  M +    P     +  I+  C   
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             + A+     M+  G  P   TFN+++    K G++ EA  I  E+ AT    +VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++GY           ++EE LR+G+    +TY  LI G  +EG  +KA  L + +  +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L+P+ + ++ +I G    K  + A  L+K M  SG  P+   + +L+   CQ      A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
             +  +M E  + P  +    L   L +C  G  + A+KL+ +M  +G  P
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLL--LCYCVNGCMDEAVKLYTEMPGKGFTP 454


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 194/402 (48%), Gaps = 19/402 (4%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRM----------------CDSSPLV--FDLL 199
            +E+++R  ++ +  D P  ++ +++  Y M                C  +P V  +  L
Sbjct: 429 QAEALVRE-MEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCL 487

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              YA   K   A +    M   G    +++ +  ++  L  +    A   ++++ ++ +
Sbjct: 488 INLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGL 547

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V   N ++ AFC +G ++RA+ + K M+     P+  T+  +I G    G +  A+ 
Sbjct: 548 KPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALD 607

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             ++M ++G  P V TFN LI G  +K ++ +A  I  EM    VSPN  TY T+++GY 
Sbjct: 608 VFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGYA 667

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            +G++      + ++   G+++D+ TY AL+   CK G+ + A  + K++   ++  N  
Sbjct: 668 ALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTF 727

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            Y+ LI G   R +   A  L + M + G +P+ H +   ++  C+  D  RA++++ EM
Sbjct: 728 VYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEEM 787

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + P+    + L  G       E A++ F++M++ GL P
Sbjct: 788 ETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKP 829



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 150/324 (46%), Gaps = 35/324 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            + +L   +   K + NA   F  +   G  P +   N  + +      +D A+   KEM
Sbjct: 518 TYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEM 577

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           ++ R  P   T   ++H F + G ++RA++VF  M   G IP+V T+N LI G   K  +
Sbjct: 578 QKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQM 637

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGF------------------------------- 343
             A++  + M   G+ PN  T+ T++ G+                               
Sbjct: 638 EKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEAL 697

Query: 344 ----CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
               CK G++  A  +  EM A N+  N   YN LI+G+ + G+    A L ++M + G+
Sbjct: 698 LKACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGV 757

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K DI TY + I   CK G   +A+ ++++++ + + PN  TY+ LI G       E+A +
Sbjct: 758 KPDIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALR 817

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ M  +G +P+K ++  LM+  
Sbjct: 818 CFQEMKLAGLKPDKAVYHCLMTAL 841



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 13/313 (4%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           +A   + + A D F  MR  G +P + + N  +  L++  +++ A+    EM    +SPN
Sbjct: 596 FARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPN 655

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +T   +MH +  LG   +A E F  +   G    V TY  L+   C  G +  A+    
Sbjct: 656 EHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTK 715

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M    I  N   +N LI G+ ++G + EA  +  +MK   V P++ TY + IN   + G
Sbjct: 716 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAG 775

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +    + + EEM  +G+K ++ TY  LI G  +    +KA    +++    L P+ + Y 
Sbjct: 776 DMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYH 835

Query: 443 ALITGQCVRKNSERAF------QLYKSMIRSGCRPNKHIFEMLMSTFCQN--EDFDRAAE 494
            L+T    R     A+       + K MI SG      I +M  +          +R   
Sbjct: 836 CLMTALLSRATVTEAYVRPGILSICKEMIESGL-----IVDMGTAVHWSKSLRKIERTGG 890

Query: 495 VLLEMLEKCMAPD 507
            L E L+K   PD
Sbjct: 891 ELTEALQKTFPPD 903



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 165/353 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + +  V+  L   YA  +    A     +M++ G    + + +  +         D 
Sbjct: 335 RGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADA 394

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  ++KE +      N      +++A+C+   +++A  + + ME  G    +  Y+T++ 
Sbjct: 395 ADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMD 454

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+   G     +     +++ G  P+V+++  LI  + K GK+ +A  +   M++  +  
Sbjct: 455 GYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKH 514

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+ TY+ LING+ ++ +     +++E+++++G+K D++ YN +I   C  G   +A  +V
Sbjct: 515 NMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMV 574

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++ K    P + T+  +I G       +RA  ++  M RSGC P  H F  L+    + 
Sbjct: 575 KEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEK 634

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              ++A E+L EM    ++P+    + +  G    G    A + F K+   GL
Sbjct: 635 RQMEKAIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGL 687



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 143/296 (48%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A    +EM    I   +   + +M  +  +G  E+ + VF+ ++  GF PSV +Y  
Sbjct: 427 MDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGC 486

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+ +   G +S A++   +ME  GI+ N+ T++ LI GF K      A  IF ++    
Sbjct: 487 LINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDG 546

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P+VV YN +I  +  +G  +    + +EM +   +    T+  +I G  + G+ K+A 
Sbjct: 547 LKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRAL 606

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   + ++  +P   T++ALI G   ++  E+A ++   M  +G  PN+H +  +M  +
Sbjct: 607 DVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTTIMHGY 666

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               D  +A E   ++ ++ +  D      L       G+ + A+ + ++M  + +
Sbjct: 667 AALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNI 722



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/409 (22%), Positives = 179/409 (43%), Gaps = 25/409 (6%)

Query: 140 LETHSIVLHI-LTKNRKFKS-SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
           +E H  +L + L   R+ K+ ++   R +   D  D  SK  +         D S   F 
Sbjct: 229 MEFHGRILTVKLDDGRRLKAKADERKRWVEGEDGDDYESKWHEER-------DGSRKAFR 281

Query: 198 LLFKTYAHRKKFRNATDTFCQM-----RDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            + +T    + +++    F ++     R+YG +        + +   D  R   A   ++
Sbjct: 282 RVLETQP--ENWQDVVSAFERIKKPSRREYGLMV------SYYARRGDMHR---ARQTFE 330

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
            MR   I P  +    ++HA+     +E A+   + M+  G   S+ TY+ ++ G    G
Sbjct: 331 SMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIG 390

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
               A ++    +      N I +  +I+ +C+   + +A  +  EM+   +   +  Y+
Sbjct: 391 NADAADRWFKEAKDRHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYH 450

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           T+++GY  VGN E   +++E +   G    +++Y  LI    K GK  KA  + K ++  
Sbjct: 451 TMMDGYTMVGNEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESA 510

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            +  N  TYS LI G    K+   AF +++ +++ G +P+  ++  ++  FC     DRA
Sbjct: 511 GIKHNMKTYSMLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRA 570

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++ EM ++   P S     +  G    G+ + A+ +F  M   G +P
Sbjct: 571 ICMVKEMQKERHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIP 619



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 59/124 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V+++L   +A R     A D   QM+  G  P I +   F+++   +  +  A    +E
Sbjct: 727 FVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINACCKAGDMLRASKMMEE 786

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + + PNV T   ++H + +  + E+A+  F+ M+  G  P    Y+ L++   ++  
Sbjct: 787 METSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPDKAVYHCLMTALLSRAT 846

Query: 314 LSLA 317
           ++ A
Sbjct: 847 VTEA 850


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/506 (23%), Positives = 217/506 (42%), Gaps = 68/506 (13%)

Query: 86  YSHLIHSDWKKLTALSTHLTP---FRVKHVL-----------LKVQKDYVLSLEFFTWVQ 131
           + H +  +  +L  LS+   P    R++H+L           L+ Q D  ++L FF W  
Sbjct: 132 FRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPPLVCAVLRSQADERVALNFFYWAD 191

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
                S     +  +L +L+K +  + +  +LR                  L + R  + 
Sbjct: 192 RQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLR------------------LMTRRGIEC 233

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
            P  F  +  +Y+   K RNA      M+  G  P +  CN  +  L+   +++ AL F 
Sbjct: 234 PPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFL 293

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-------------MGF---- 294
           + M+   I P++ T N ++  +C L  IE A+E+   + S             MGF    
Sbjct: 294 ERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKE 353

Query: 295 -------------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
                              IP   TYNTLI      G    A+ F    +  G   + + 
Sbjct: 354 KKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVG 413

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           ++ ++  FC+KG++ EA  +  +M +   +P+VVTY  +++G+ ++G  +    + ++M 
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           ++G K + ++Y AL+ GLC  GK+ +A  ++   +++   PNA TY A++ G        
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLS 533

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L + M+  G  P      +L+ + CQN+    A + L E L K  A + +  + + 
Sbjct: 534 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 593

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            G    G  E A+ +   M + G  P
Sbjct: 594 HGFCQIGDMEAALSVLDDMYLSGKHP 619



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 139/312 (44%), Gaps = 2/312 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
            +P   + N  +  L      D AL F KE +      +    + ++H+FC+ G ++ A 
Sbjct: 372 LIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAK 431

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +  +M S G  P V TY  ++ G C  G +  A K    M K+G +PN +++  L+ G 
Sbjct: 432 SLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGL 491

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C  GK  EA  + +  +    +PN +TY  +++G  + G       L  EM+  G     
Sbjct: 492 CHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTP 551

Query: 404 LTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           +  N LI  LC+  K  +A  YL + L+K   + N   ++ +I G C   + E A  +  
Sbjct: 552 VEINLLIQSLCQNQKVVEAKKYLEECLNKGCAI-NVVNFTTVIHGFCQIGDMEAALSVLD 610

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M  SG  P+   +  L     +    D AAE++++ML K + P  +    +       G
Sbjct: 611 DMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWG 670

Query: 523 KDELAMKLFRKM 534
           + +  + L  KM
Sbjct: 671 RVDDMLNLLEKM 682



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 2/317 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           + +D GF       +  + S     R+D A     +M     +P+V T   ++  FC+LG
Sbjct: 401 EAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLG 460

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I+ A ++ + M   G  P+  +Y  L++G C+ G    A +  N+ E++   PN IT+ 
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 520

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            ++ G  ++GKL EA  +  EM      P  V  N LI    Q           EE L  
Sbjct: 521 AVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNK 580

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G  ++++ +  +I G C+ G  + A  ++ D+  +   P+A TY+AL      +   + A
Sbjct: 581 GCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEA 640

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   M+  G  P    +  ++  + Q    D    +L +ML++   P   + +++   
Sbjct: 641 AELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEK 698

Query: 518 LHHCGKDELAMKLFRKM 534
           L   G  E A KL  K+
Sbjct: 699 LCDFGNLEEAEKLLGKV 715



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/437 (22%), Positives = 178/437 (40%), Gaps = 24/437 (5%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           +E   W     P  +T  T   ++H+L+K+     + + L+   D   F +    + +I+
Sbjct: 363 MEKMVWNSNLIPDQVTYNT---LIHMLSKHGHADDALAFLKEAQDK-GFHIDKVGYSAIV 418

Query: 184 YSY----RMCDSSPLVFDL--------------LFKTYAHRKKFRNATDTFCQMRDYGFL 225
           +S+    RM ++  LV D+              +   +    +   A     QM  +G  
Sbjct: 419 HSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCK 478

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P   S    L+ L  S +   A         +  +PN  T   VMH   + G +  A ++
Sbjct: 479 PNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDL 538

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            + M   GF P+    N LI   C    +  A K+       G   NV+ F T+I GFC+
Sbjct: 539 TREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQ 598

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G +  A  +  +M  +   P+ VTY  L +  G+ G  +  A L  +ML  G+    +T
Sbjct: 599 IGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 658

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y ++I    + G+      L++ + K    P  + Y+ +I   C   N E A +L   ++
Sbjct: 659 YRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVL 716

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           R+  + + +   +LM ++ +      A +V   M  + + PD  +  ++   L   GK  
Sbjct: 717 RTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLV 776

Query: 526 LAMKLFRKMEIRGLLPK 542
            A  L  +   RG+  K
Sbjct: 777 EADNLMLRFVERGIQQK 793


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 180/370 (48%), Gaps = 2/370 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++RG+     F     L D ++   R  D S  VF +L            A + F +M 
Sbjct: 225 SLIRGLCGVGKFLEGFGLVDEMIR--RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMV 282

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G+ P I +C   +        VD+A   +  +       +V+T N+ +H +CK+G + 
Sbjct: 283 NRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVR 342

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            AV VF  M   G +P++ TYN+LI   C  G +S A +    M ++G+ P+++T   L+
Sbjct: 343 DAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILL 402

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  +L +A  +F+++  + ++P+V +Y  LI+G           +L  +M    + 
Sbjct: 403 DGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLV 462

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             I+TY+ LI GLC+ G+   A  L+ ++     +P+  TYS L+     +++ + A  L
Sbjct: 463 PHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFL 522

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  MI+ G  P+   + +++  +C++E  D A  +  EM  K + PD +  + L++ +  
Sbjct: 523 FNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFK 582

Query: 521 CGKDELAMKL 530
            G +    K 
Sbjct: 583 SGSNSYEWKF 592



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 145/298 (48%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD    FY EM  N + PN +T   ++   C +G       +   M   G   SV  +  
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C  G+L  A +  + M   G +PN++T   L+ G+C KG +  A  +F  +    
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              +V TYN  I+GY +VG       +++EM R G+  +I+TYN+LI  LCK G+   A 
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +VK + ++ L P+  T   L+ G C  K  ++A  L+  ++ SG  P+   + +L+   
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C +     A  +L +M  K + P  +  S L  GL   G+   A +L  +M ++G LP
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLP 498



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 149/295 (50%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
             G   EM R  +  +VY   +++   CK G++  A E+F  M + G+ P++ T   L+ 
Sbjct: 239 GFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMG 298

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C KG + +A +  + + + G + +V T+N  I G+CK G++ +A R+F EM    V P
Sbjct: 299 GYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVP 358

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N+VTYN+LI+   + G       + + M R+G+  DI+T   L+ GLCK  +  +A  L 
Sbjct: 359 NIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLF 418

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L ++ L P+  +Y+ LI G C  +    A  L + M      P+   +  L+   C++
Sbjct: 419 NQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRS 478

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A  +L EM  K   PD+I  S L   L      + A+ LF +M  RGL P
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEP 533



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +  NV   ++V+   C+ G ++   E +  M   G  P+  TY +LI G C  G      
Sbjct: 181 VKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGF 240

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G+  +V  F  LI G CK G L EA  +F EM      PN+VT   L+ GY
Sbjct: 241 GLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
              GN +M   L++ +   G K D+ TYN  I G CK G+ + A  +  ++ +  +VPN 
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY++LI   C       A+++ K+M RSG  P+     +L+   C+++  D+A  +  +
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++E  + PD    + L  G     +   AM L R M ++ L+P
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVP 463



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 150/291 (51%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + EM      PN+ T   +M  +C  G ++ A E+F  +   GF   V TYN  I G+C 
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G +  A++  + M + G+ PN++T+N+LI   CK G++  A  I   M  + ++P++VT
Sbjct: 338 VGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVT 397

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
              L++G  +    +    L+ +++ +G+  D+ +Y  LI G C   +  +A  L++D+ 
Sbjct: 398 CCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMH 457

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
             +LVP+  TYS LI G C       A++L   M   G  P+   + +L+    + +  D
Sbjct: 458 LKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLD 517

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A  +  +M+++ + PD +  + +  G     + + A+ LFR+M ++ L+P
Sbjct: 518 EAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVP 568



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 164/335 (48%), Gaps = 9/335 (2%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           +  +++ G     + D+  +LFD+I  + ++        +++    Y    + R+A   F
Sbjct: 292 TCTALMGGYCLKGNVDMARELFDAIGEWGFK---RDVWTYNVFIHGYCKVGRVRDAVRVF 348

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G +P I + N  +  L  +  V  A    K M R+ ++P++ T  +++   CK 
Sbjct: 349 DEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKS 408

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             +++A+ +F  +   G  P V +Y  LI G C    +  AM     M    + P+++T+
Sbjct: 409 KRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTY 468

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           + LI G C+ G++  A R+ +EM      P+ +TY+ L++   +  + +    L+ +M++
Sbjct: 469 SCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIK 528

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G++ D++ Y  +I G CK  +  +A  L +++   +LVP+  TY+ L     V K+   
Sbjct: 529 RGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNA--VFKSGSN 586

Query: 457 AFQL-YKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +++  + ++IR    P   + + L +  C++E  D
Sbjct: 587 SYEWKFVNVIRD-INPPPRVLKYL-AALCKSEHLD 619



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/354 (22%), Positives = 146/354 (41%), Gaps = 44/354 (12%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH-AFCKLGIIERAVEVFKNME 290
           NK L+ L+ + +   A+  + +   N           ++   F  LG +  +  +F  + 
Sbjct: 40  NKHLTCLMKTNQHSTAIALFNQNEYNNFITPCIITLTIIITCFFHLGHVSFSFSIFGKIL 99

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G+       NT++ G C  G +  A++F + +  NG   N +++  LI G C+ G+++
Sbjct: 100 KRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVN 159

Query: 351 EANRI-------------------------------------------FSEMKATNVSPN 367
           EA  +                                           ++EM    V PN
Sbjct: 160 EAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPN 219

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             TY +LI G   VG    G  L +EM+R G+ V +  +  LI GLCK G   +A  +  
Sbjct: 220 EFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFD 279

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++      PN  T +AL+ G C++ N + A +L+ ++   G + +   + + +  +C+  
Sbjct: 280 EMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVG 339

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A  V  EM  + + P+ +  + L   L   G+   A ++ + M   GL P
Sbjct: 340 RVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTP 393


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 165/311 (53%), Gaps = 3/311 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L  S +VD A+  +K+M    I P+V T   ++    K   ++ A ++F+   + G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEA 352
             P+V TYNT+I G C  G +  A+   + M  + G +P V+T++TLI G C+  ++ + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++  EM     +PN VTYNTL+N     G S+   SL E+M  NG   +++T+  +I G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 413 LCKEGKTKKAAYLVKD--LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
           LCKEG+ + A  +V +  + ++ L P+  T+++++ G C  +    A  ++K  +  GCR
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   +  L+    +    D A ++L +M+E     +++  S +  GL   G+ E A+ +
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 531 FRKMEIRGLLP 541
            R+M   G LP
Sbjct: 301 LRQMRDAGCLP 311



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 170/370 (45%), Gaps = 1/370 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I++G+      +   ++ D +           + F+ +       ++  +A + F +  +
Sbjct: 177 IIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 236

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + +  +  L    ++D AL    +M       N  T + V+    K+G +E 
Sbjct: 237 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 296

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           AV V + M   G +P   TYNTLI G   +  L  A+     M + G  P+V+T+ TL  
Sbjct: 297 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 356

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C+ G+  EA  I   M A   +PN +TY+++++G  + G        +E+M R+ +  
Sbjct: 357 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 416

Query: 402 -DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++ Y+ALI GLCK GK  +A   ++ + +   +P+  T+S LI G C     +   +L
Sbjct: 417 PHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 476

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ M   GC P+   +  L+   C+    D A ++  +M    ++PD      +  GL  
Sbjct: 477 FRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLE 536

Query: 521 CGKDELAMKL 530
             +DE A ++
Sbjct: 537 VNRDEDAKRI 546



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 160/315 (50%), Gaps = 2/315 (0%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +GF P + + +  +  L     VD      +EM     +PN  T N +++A    G  + 
Sbjct: 95  FGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKE 154

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN--LMEKNGIQPNVITFNTL 339
           A  + + M + G  P + T+  +I G C +G +  A +  +   M ++G+ P+VITFN++
Sbjct: 155 AFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSV 214

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G CK+ ++ +A+ +F         PNVVTY+TLI+G  ++   +    L  +M+  G 
Sbjct: 215 LDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGC 274

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + + +TY+ ++ GL K G+ + A  +++ +     +P+A TY+ LI G   R+    A  
Sbjct: 275 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 334

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M+ +G  P+   +  L    C++  FD A E+L  M  +  AP++I  S +  GL 
Sbjct: 335 LLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLC 394

Query: 520 HCGKDELAMKLFRKM 534
             G+   A+  F KM
Sbjct: 395 KAGRVTEALGYFEKM 409



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 154/338 (45%), Gaps = 3/338 (0%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +K   A   F QM D    P + +    +  L    RV  A   ++E R     P V T 
Sbjct: 9   RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTY 68

Query: 267 NMVMHAFCKLGIIERAVEVFKNME-SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
           N ++   CK G IE A+ ++ +M    GF P+V TY+TLI G C    +    K    M 
Sbjct: 69  NTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G  PN +T+NTL+     +G+  EA  +  +M A    P ++T+  +I G  + G  E
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188

Query: 386 MGASLYEE--MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
               + +E  M+ +G+  D++T+N+++ GLCKE +   A  + K   +    PN  TYS 
Sbjct: 189 AAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYST 248

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           LI G       + A QL   M+  GCR N   +  ++    +    + A  VL +M +  
Sbjct: 249 LIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAG 308

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             PD++  + L  G     +   A+ L R+M   G  P
Sbjct: 309 CLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 174/384 (45%), Gaps = 5/384 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D   KL + +  + R C  + + ++ L      + + + A     QM 
Sbjct: 106 TLIDGLCRDHEVDKGCKLLEEM--AGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA 163

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM--RRNRISPNVYTLNMVMHAFCKLGI 278
             G  P + +    +  L     ++ A     EM    + +SP+V T N V+   CK   
Sbjct: 164 ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQR 223

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I  A  VFK     G  P+V TY+TLI G      +  A++    M + G + N +T++T
Sbjct: 224 ILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYST 283

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++ G  K G++ +A  +  +M+     P+ VTYNTLI+G+ +         L  EML  G
Sbjct: 284 VVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAG 343

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
               ++TY  L  GLC+ G+  +A  ++  +      PNA TYS+++ G C       A 
Sbjct: 344 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEAL 403

Query: 459 QLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             ++ M R     P+   +  L+   C+    D A E L  M+     PD +  S L +G
Sbjct: 404 GYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILING 463

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ +  ++LFR M  RG +P
Sbjct: 464 LCDAGRIDTGLELFRGMAERGCVP 487



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 167/358 (46%), Gaps = 7/358 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKK----FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           C    + F L+ K      +    FR   + F  M + G  P + + N  L  L   +R+
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRI 224

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   +K        PNV T + ++    K+  ++ A+++   M  +G   +  TY+T+
Sbjct: 225 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTV 284

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           + G    G +  A+     M   G  P+ +T+NTLI GF K+ +L EA  +  EM     
Sbjct: 285 VDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGF 344

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+VVTY TL +G  + G  +    + + M   G   + +TY++++ GLCK G+  +A  
Sbjct: 345 HPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALG 404

Query: 425 LVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
             + + ++ +V P+   YSALI G C     + A++  + MIR+G  P+   F +L++  
Sbjct: 405 YFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGL 464

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C     D   E+   M E+   PD +  + L   L    + + A  LF++M   GL P
Sbjct: 465 CDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 130/272 (47%), Gaps = 22/272 (8%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK-----LFDSILYSYRMCDSSPLVF 196
           T+S V+  L K  + + +  +LR + D+    LP       L D      R+ ++  L+ 
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGC--LPDAVTYNTLIDGFFKRQRLREAVGLLR 337

Query: 197 DLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           ++L          + T  H      +F  A +    M   G  P   + +  +  L  + 
Sbjct: 338 EMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAG 397

Query: 243 RVDIALGFYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           RV  ALG++++M R+ + +P+V   + ++   CK G I+ A E  + M   G IP V T+
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           + LI+G C+ G +   ++    M + G  P+++T+ TL+   C+  ++ EA  +F +M++
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
             +SP+  T  T+I+G  +V   E    + +E
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +    +   +L+++M+   I  D++TY ALI GL K+ + K+A  L ++     
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             P   TY+ +I G C     E A  LY  M I  G RP    +  L+   C++ + D+ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            ++L EM  +  AP+++  + L + L   G+ + A  L  +M   G  P+
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPE 170


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 3/363 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++  T     K   A D F + +  GF   + + +  +S+   S R   AL  ++ M++ 
Sbjct: 204 IMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKA 263

Query: 258 RISPNVYTLNMVMHAFCKLGI-IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLS 315
              PN+ T N ++ A  K G+ +++A+++F+ M+  G  P   T+N+LI+  C++G L  
Sbjct: 264 GCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIA-VCSRGSLWE 322

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            + +    M++ GI+ ++ T+NTLI   CK G++  A  I S M+  N+SPNVVTY+T+I
Sbjct: 323 DSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMI 382

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GYG++G  E    LY +M  +G++ D ++YN LI    K G+   A    KD+++  L 
Sbjct: 383 DGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLK 442

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ALI     +   + A  L+  M   G  PN   +  L+  + +      A  +
Sbjct: 443 ADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSI 502

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
            +E     + PD ++ S L      CG  E A+ L ++M   G+ P        I+    
Sbjct: 503 FVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGR 562

Query: 556 NGE 558
           NG+
Sbjct: 563 NGQ 565



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 167/339 (49%), Gaps = 19/339 (5%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-------IIESCNKFLSSLLDSERVDI- 246
            +  +   Y    + R A   F  M+  G  P       II++C K          VD+ 
Sbjct: 236 AYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDACGK--------GGVDLK 287

Query: 247 -ALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-IIERAVEVFKNMESMGFIPSVTTYNTL 304
            AL  ++EM++  + P+  T N ++ A C  G + E +  VF  M+  G    + TYNTL
Sbjct: 288 KALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTL 346

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I   C  G + LA    + M    I PNV+T++T+I G+ K G   EA  ++ +MK + V
Sbjct: 347 IDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGV 406

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+ V+YNTLI+ Y ++G  +   +  ++M R G+K D++TYNALI    K+GK K AA 
Sbjct: 407 RPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAG 466

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L   +    LVPN  TYSALI         + A  ++    R+G +P+  ++  L+ + C
Sbjct: 467 LFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCC 526

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +    + A  +L EM +  + P+ +  + L       G+
Sbjct: 527 KCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 169/348 (48%), Gaps = 7/348 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L    +    + ++   F +M+  G    I + N  + ++    ++++A      
Sbjct: 306 ITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSS 365

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           MR   ISPNV T + ++  + KLG  E A+ ++ +M+  G  P   +YNTLI  +   G 
Sbjct: 366 MRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGR 425

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+     ME+ G++ +V+T+N LI  + K+GK  +A  +F +MKA  + PNV+TY+ 
Sbjct: 426 FDDALTACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSA 485

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ Y + G  +   S++ E  R G+K D++ Y++LI   CK G  + A  L++++ +  
Sbjct: 486 LIDAYSKAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAG 545

Query: 434 LVPNASTYSALI-----TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + PN  TY++LI      GQ     + +         + G R  + I + L S    N+ 
Sbjct: 546 IQPNIVTYNSLIDAYGRNGQVDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDH 605

Query: 489 FD--RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
                A  V  EM +  + P+ +  S + +    C   + A  L  +M
Sbjct: 606 TGVLAAVSVFHEMQQFGLKPNVVTFSAILNACSRCSSLQEASVLLEQM 653



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/287 (19%), Positives = 115/287 (40%), Gaps = 44/287 (15%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   Y  + K+++A   F +M+  G +P + + +  + +   +     A   + E
Sbjct: 446 VTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVE 505

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
            +R  + P+V   + ++ + CK G++E AV + + M   G  P++ TYN+LI  +   G 
Sbjct: 506 FKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQ 565

Query: 314 LS------------------------------------------LAMKFKNLMEKNGIQP 331
           +                                            A+   + M++ G++P
Sbjct: 566 VDNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKP 625

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+TF+ ++    +   L EA+ +  +M+  +     + +  L+     V        L+
Sbjct: 626 NVVTFSAILNACSRCSSLQEASVLLEQMRFFDSWVYGIAHGLLMGLREHVWVEAQ--RLF 683

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           +E+ R         YNAL   L   G+ + A  +V    +  +  NA
Sbjct: 684 DEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKRRQVWENA 730


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 185/412 (44%), Gaps = 60/412 (14%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   GF P + + N  L  L   +RV  AL  + +M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC 77

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
           +    PNV T   +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 78  K----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 313 -LLSLAMKFKNL--------------------------------MEKNGIQPNVITFNTL 339
             L+L  K + L                                M+  GI P+++T++ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  GK  EA R+  EM    +SP+VVT++ LIN   + G+      L +EM+ +G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDK-----------NSLVPNASTYSALITGQ 448
             +++T N L+ GLC  GK K A  + K + K           N + P+  TY+ LI+G 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                   A +LY+ M   G  P+   +  +++  C+    D A ++   M  K  +P+ 
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTIN 551
           +  + L +G    G  +  ++LF +M  RG+         L +GF K+  IN
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 160/331 (48%), Gaps = 23/331 (6%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           D ++YS         + D L+K   H     +A + F +M+D G  P I + +  ++   
Sbjct: 151 DVVIYSA--------IIDGLWKDGRHT----DAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            S +   A    +EM   +ISP+V T + +++A  K G +  A ++ + M S G  P+V 
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGK 348
           T NTL+ G C+ G L  A++    M+K           NG++P+V T+N LI G   +GK
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             EA  ++ EM    + P+ VTY+++ING  +    +    +++ M       +I+T+N 
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G CK G       L  ++ +  +V NA TY  LI G     N   +  +++ MI SG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
             P+      +++     E+  RA  +L E+
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 5/279 (1%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           +I  ++Y+ N+++  FC    +  A+  F  +  +GF P++ T+NTL+ G C +  +S A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +   + M K    PNV+TF TL+ G C++G++ EA  +   M    + PN +TY T+++G
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 378 YGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
             ++G++    +L  +M   + IK D++ Y+A+I GL K+G+   A  L  ++    + P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TYS +I G C       A +L + M+     P+   F  L++   +  D + A ++L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            EM+   + P+ +  + L  GL   GK + A+++F+ M+
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 16/310 (5%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           D    D A   + EM+   I P++ T + +++ FC  G    A  + + M      P V 
Sbjct: 165 DGRHTD-AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T++ LI+    +G L+ A      M  +G+ PNV+T NTL+ G C  GKL +A  +F  M
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 360 KAT-----------NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +            V P+V TYN LI+G    G       LYEEM   GI  D +TY++
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I GLCK+ +  +A  +   +   S  PN  T++ LITG C     +   +L+  M R G
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-- 526
              N   +  L+  F +  + + + ++  EM+   + PD+I +  + +GL    K+EL  
Sbjct: 404 IVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW--SKEELKR 461

Query: 527 AMKLFRKMEI 536
           A+ +  ++++
Sbjct: 462 ALAMLEELQM 471



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 16/326 (4%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I S N  +       ++  AL  + ++ +    P + T N ++H  C    +  A+++F 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M      P+V T+ TL++G C +G +  A+   + M ++G+QPN IT+ T++ G CK G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 348 KLHEANRIFSEMKA-TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
               A  +  +M+  +++ P+VV Y+ +I+G  + G      +L+ EM   GI  DI+TY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           + +I G C  GK  +A  L++++    + P+  T+S LI       +   A  L + MI 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM-----------APDSIILSELY 515
           SG  PN      L+   C +     A E+   M +  M            PD    + L 
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           SGL + GK   A +L+ +M  RG++P
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVP 336



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   S  +    +L   +L   R      + F  L           +A D   +M  
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLV--RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-----------NRISPNVYTLNMVM 270
            G  P + +CN  L  L DS ++  AL  +K M++           N + P+V T N+++
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
                 G    A E+++ M   G +P   TY+++I+G C +  L  A +  + M      
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN++TFNTLI G+CK G + +   +F EM    +  N +TY TLI G+ +VGN      +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           ++EM+ +G+  D +T   ++ GL  + + K+A  ++++L
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 41/270 (15%)

Query: 295 IP-SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           IP  + ++N LI   C+   L  A+     + K G  P ++TFNTL+ G C + ++ EA 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F +M      PNVVT+ TL+N                                   GL
Sbjct: 71  DLFHQM----CKPNVVTFTTLMN-----------------------------------GL 91

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR-SGCRPN 472
           C+EG+  +A  L+  + ++ L PN  TY  ++ G C   ++  A  L + M   S  +P+
Sbjct: 92  CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPD 151

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I+  ++    ++     A  + +EM +K + PD +  S + +G    GK   A +L +
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +M +R + P        IN   + G+  S 
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSA 241



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 98/211 (46%), Gaps = 9/211 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS-------PLV--FDLLFKTYAHRKKFRN 211
           ++L G+ DS       ++F ++  S    D++       P V  +++L     +  KF  
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + + +M   G +P   + +  ++ L    R+D A   +  M     SPN+ T N ++ 
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK G+++  +E+F  M   G + +  TY TLI G    G ++ ++     M  +G+ P
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYP 441

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           + IT   ++ G   K +L  A  +  E++ +
Sbjct: 442 DTITIRNMLTGLWSKEELKRALAMLEELQMS 472


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 185/412 (44%), Gaps = 60/412 (14%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L K +    K   A  TF ++   GF P + + N  L  L   +RV  AL  + +M 
Sbjct: 18  FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC 77

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
           +    PNV T   +M+  C+ G +  AV +   M   G  P+  TY T++ G C  G   
Sbjct: 78  K----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133

Query: 313 -LLSLAMKFKNL--------------------------------MEKNGIQPNVITFNTL 339
             L+L  K + L                                M+  GI P+++T++ +
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC  GK  EA R+  EM    +SP+VVT++ LIN   + G+      L +EM+ +G+
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDK-----------NSLVPNASTYSALITGQ 448
             +++T N L+ GLC  GK K A  + K + K           N + P+  TY+ LI+G 
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                   A +LY+ M   G  P+   +  +++  C+    D A ++   M  K  +P+ 
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTIN 551
           +  + L +G    G  +  ++LF +M  RG+         L +GF K+  IN
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNIN 425



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 160/331 (48%), Gaps = 23/331 (6%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           D ++YS         + D L+K   H     +A + F +M+D G  P I + +  ++   
Sbjct: 151 DVVIYSA--------IIDGLWKDGRHT----DAQNLFIEMQDKGIFPDIVTYSCMINGFC 198

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            S +   A    +EM   +ISP+V T + +++A  K G +  A ++ + M S G  P+V 
Sbjct: 199 SSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEK-----------NGIQPNVITFNTLIFGFCKKGK 348
           T NTL+ G C+ G L  A++    M+K           NG++P+V T+N LI G   +GK
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
             EA  ++ EM    + P+ VTY+++ING  +    +    +++ M       +I+T+N 
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G CK G       L  ++ +  +V NA TY  LI G     N   +  +++ MI SG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
             P+      +++     E+  +A  +L E+
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 5/279 (1%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           +I  ++Y+ N+++  FC    +  A+  F  +  +GF P++ T+NTL+ G C +  +S A
Sbjct: 10  QIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEA 69

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +   + M K    PNV+TF TL+ G C++G++ EA  +   M    + PN +TY T+++G
Sbjct: 70  LDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125

Query: 378 YGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
             ++G++    +L  +M   + IK D++ Y+A+I GL K+G+   A  L  ++    + P
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFP 185

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TYS +I G C       A +L + M+     P+   F  L++   +  D + A ++L
Sbjct: 186 DIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLL 245

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            EM+   + P+ +  + L  GL   GK + A+++F+ M+
Sbjct: 246 QEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 151/310 (48%), Gaps = 16/310 (5%)

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           D    D A   + EM+   I P++ T + +++ FC  G    A  + + M      P V 
Sbjct: 165 DGRHTD-AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T++ LI+    +G L+ A      M  +G+ PNV+T NTL+ G C  GKL +A  +F  M
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 360 KAT-----------NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +            V P+V TYN LI+G    G       LYEEM   GI  D +TY++
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I GLCK+ +  +A  +   +   S  PN  T++ LITG C     +   +L+  M R G
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-- 526
              N   +  L+  F +  + + + ++  EM+   + PD+I +  + +GL    K+EL  
Sbjct: 404 IVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLW--SKEELKK 461

Query: 527 AMKLFRKMEI 536
           A+ +  ++++
Sbjct: 462 ALAMLEELQM 471



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 157/326 (48%), Gaps = 16/326 (4%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           I S N  +       ++  AL  + ++ +    P + T N ++H  C    +  A+++F 
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M      P+V T+ TL++G C +G +  A+   + M ++G+QPN IT+ T++ G CK G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 348 KLHEANRIFSEMKA-TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
               A  +  +M+  +++ P+VV Y+ +I+G  + G      +L+ EM   GI  DI+TY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           + +I G C  GK  +A  L++++    + P+  T+S LI       +   A  L + MI 
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM-----------APDSIILSELY 515
           SG  PN      L+   C +     A E+   M +  M            PD    + L 
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           SGL + GK   A +L+ +M  RG++P
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVP 336



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   S  +    +L   +L   R      + F  L           +A D   +M  
Sbjct: 193 MINGFCSSGKWSEAQRLLQEMLV--RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-----------NRISPNVYTLNMVM 270
            G  P + +CN  L  L DS ++  AL  +K M++           N + P+V T N+++
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
                 G    A E+++ M   G +P   TY+++I+G C +  L  A +  + M      
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN++TFNTLI G+CK G + +   +F EM    +  N +TY TLI G+ +VGN      +
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDI 430

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           ++EM+ +G+  D +T   ++ GL  + + KKA  ++++L
Sbjct: 431 FQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 41/270 (15%)

Query: 295 IP-SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           IP  + ++N LI   C+   L  A+     + K G  P ++TFNTL+ G C + ++ EA 
Sbjct: 11  IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +F +M      PNVVT+ TL+N                                   GL
Sbjct: 71  DLFHQM----CKPNVVTFTTLMN-----------------------------------GL 91

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR-SGCRPN 472
           C+EG+  +A  L+  + ++ L PN  TY  ++ G C   ++  A  L + M   S  +P+
Sbjct: 92  CREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPD 151

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I+  ++    ++     A  + +EM +K + PD +  S + +G    GK   A +L +
Sbjct: 152 VVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQ 211

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           +M +R + P        IN   + G+  S 
Sbjct: 212 EMLVRKISPDVVTFSGLINALVKEGDLNSA 241



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 9/211 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS-------PLV--FDLLFKTYAHRKKFRN 211
           ++L G+ DS       ++F ++  S    D++       P V  +++L     +  KF  
Sbjct: 262 TLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLE 321

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + + +M   G +P   + +  ++ L    R+D A   +  M     SPN+ T N ++ 
Sbjct: 322 AEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLIT 381

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK G+++  +E+F  M   G + +  TY TLI G    G ++ ++     M  +G+ P
Sbjct: 382 GYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYP 441

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           + IT   ++ G   K +L +A  +  E++ +
Sbjct: 442 DTITIRNMLTGLWSKEELKKALAMLEELQMS 472


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 190/392 (48%), Gaps = 5/392 (1%)

Query: 176 SKLFDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           +K +D +L   +  +   + +DL     +   +  R+K   A     ++   G+ P   +
Sbjct: 103 TKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVT 162

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  L+ L    RV  A+     M  ++  P++ TLN +++  C    +  AV++   M 
Sbjct: 163 FNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMM 222

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           + G  P+  TY  +++  C  G  + A+     ME   I+P+V+T+  +I   CK G+L 
Sbjct: 223 ANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLD 282

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A   FSEM+   +  NV TYN+LI  +   G  + GA L  +M+   I  +++T++ALI
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALI 342

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L KEGK  +A  L  ++    + PN  TY++LI G C  K  + A Q+   M+  GC 
Sbjct: 343 DSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCD 402

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   + +L++ FC+ +  D    +  +M  + M  D++  S L  G     K  +A K+
Sbjct: 403 PDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKV 462

Query: 531 FRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           F++M  +G+ P        ++   +NGE E  
Sbjct: 463 FQEMVSQGVHPGIMTYAILLDGLCDNGELEEA 494



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 178/394 (45%), Gaps = 6/394 (1%)

Query: 150 LTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL--LFKTYAHRK 207
           LT +RK  S +  LR  L     D    LF S+L S  +    P V D   LF   A  K
Sbjct: 49  LTSDRKMSSYKERLRSGLVDIKKDDAVALFQSMLRSRPL----PTVIDFNRLFGLLARTK 104

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           ++        QM   G    + + N  ++      ++  A     ++ +    PN  T N
Sbjct: 105 QYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFN 164

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            +++  C  G +  AVE+   M     +P + T NT+++G C K  +S A+     M  N
Sbjct: 165 TLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN 224

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G QPN  T+  ++   CK G    A  +  +M+   + P+VVTY  +I+   + G  +  
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S + EM   GIK ++ TYN+LI   C  G+    A L++D+    + PN  T+SALI  
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                    A  LY  MI  G  PN   +  L+   C ++  D A +++  M+ K   PD
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + L +G     + +  M+LFRKM +RG++ 
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA 438



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 154/310 (49%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P + + N  ++ L   +RV  A+     M  N   PN +T   +++  CK G    A++
Sbjct: 192 VPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALD 251

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           + + ME     P V TY  +I   C  G L  A+ F + ME  GI+ NV T+N+LI  FC
Sbjct: 252 LLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFC 311

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
             G+  +  ++  +M    ++PNVVT++ LI+   + G       LY EM+  GI+ + +
Sbjct: 312 SFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN+LI GLC + +  +A  ++  +      P+  TY+ LI G C  K  +   +L++ M
Sbjct: 372 TYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKM 431

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   +   +  L+  FCQ+     A +V  EM+ + + P  +  + L  GL   G+ 
Sbjct: 432 SLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGEL 491

Query: 525 ELAMKLFRKM 534
           E A+ +  +M
Sbjct: 492 EEALGILDQM 501



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 4/335 (1%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A D   +M      P + +    + +L    R+D AL F+ EM    I  NV+T N ++
Sbjct: 248 SALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLI 307

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            +FC  G  +   ++ ++M +    P+V T++ LI     +G L+ A    N M   GI+
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIE 367

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN IT+N+LI+G C   +L EAN++   M +    P++ TYN LING+ +    + G  L
Sbjct: 368 PNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRL 427

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           + +M   G+  D +TY+ LI G C+  K   A  + +++    + P   TY+ L+ G C 
Sbjct: 428 FRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCD 487

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               E A  +   M +     +  I+ +++   C     D A  +   +  K +  D   
Sbjct: 488 NGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQS 547

Query: 511 LSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKG 543
            + + SGL  C +  L  A  LFRKM+  G  P G
Sbjct: 548 YNIMLSGL--CKRSSLSEADALFRKMKEDGYEPDG 580



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 156/334 (46%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
           + +   A D   +M   G  P   +    L+ +  S     AL   ++M   +I P+V T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
             +++   CK G ++ A+  F  ME+ G   +V TYN+LI   C+ G      +    M 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
              I PNV+TF+ LI    K+GKL EA  +++EM    + PN +TYN+LI G       +
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               + + M+  G   DI TYN LI G CK  +      L + +    ++ +  TYS LI
Sbjct: 388 EANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLI 447

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C  +    A ++++ M+  G  P    + +L+   C N + + A  +L +M +  M 
Sbjct: 448 QGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKME 507

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            D  I + +  G+ +  K + A  LF  +  +G+
Sbjct: 508 LDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 187/413 (45%), Gaps = 29/413 (7%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKL-FDSILYSYRMCDS 191
           H P  +TL T  IV  +  K+R  ++ + I R + +      P++  +  IL   RMC S
Sbjct: 191 HVPDLITLNT--IVNGLCLKDRVSEAVDLIARMMANGCQ---PNQFTYGPILN--RMCKS 243

Query: 192 SPLVFDL-LFKTYAHRK-------------------KFRNATDTFCQMRDYGFLPIIESC 231
                 L L +   HRK                   +  +A   F +M   G    + + 
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + S     R D      ++M   +I+PNV T + ++ +  K G +  A +++  M +
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TYN+LI G CN   L  A +  +LM   G  P++ T+N LI GFCK  ++ +
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
             R+F +M    +  + VTY+TLI G+ Q     +   +++EM+  G+   I+TY  L+ 
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLD 483

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+ ++A  ++  + K  +  +   Y+ +I G C     + A+ L+ S+   G + 
Sbjct: 484 GLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKR 543

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +   + +++S  C+      A  +  +M E    PD    + L    H  G D
Sbjct: 544 DIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA-HLRGND 595



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 133/294 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L  +     K   A D + +M   G  P   + N  +  L + +R+D A      
Sbjct: 336 VTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDL 395

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+++T N++++ FCK   ++  + +F+ M   G I    TY+TLI G C    
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRK 455

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L +A K    M   G+ P ++T+  L+ G C  G+L EA  I  +M    +  ++  YN 
Sbjct: 456 LIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNI 515

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G       +   SL+  +   G+K DI +YN ++ GLCK     +A  L + + ++ 
Sbjct: 516 IIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDG 575

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
             P+  TY+ LI       +   + QL + M R G   +    +++M      E
Sbjct: 576 YEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGE 629



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 4/296 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + +  + SL+   ++  A   Y EM    I PN  T N +++  C    ++ A ++
Sbjct: 333 PNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQM 392

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M S G  P + TYN LI+G C    +   M+    M   G+  + +T++TLI GFC+
Sbjct: 393 MDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             KL  A ++F EM +  V P ++TY  L++G    G  E    + ++M +  +++DI  
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN +I G+C   K   A  L   L    +  +  +Y+ +++G C R +   A  L++ M 
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS----IILSELYSG 517
             G  P+   +  L+    +  D   + +++ EM     + D+    I++  L SG
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSG 628



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 4/160 (2%)

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             +L++ MLR+     ++ +N L   L +  +      L K ++   +  +  T + +I 
Sbjct: 74  AVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMIN 133

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
             C R+    AF     + + G  PN   F  L++  C       A E++  M+     P
Sbjct: 134 CFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVP 193

Query: 507 DSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
           D I L+ + +GL  C KD +  A+ L  +M   G  P  F
Sbjct: 194 DLITLNTIVNGL--CLKDRVSEAVDLIARMMANGCQPNQF 231


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 2/383 (0%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           +++  +LR  LD+ SF    K+FD ++    +   +   F  L        +        
Sbjct: 150 ETANWVLRAGLDTGSFAYARKVFDGMVTRGGLLPDAR-SFRALIVGCCRDGRMEEVDALL 208

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M+  GF     +C   +       R       ++ M      PNV      +   CK 
Sbjct: 209 TVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKR 268

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVIT 335
             +++A  V + M + G  P+V T+ +LI+G C  G    A + F  L++ +  +PNV T
Sbjct: 269 AYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHT 328

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +  +I G+CK+GKL  A  +   M    ++PN  TY TLI+G+ + G+      L  +M 
Sbjct: 329 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMR 388

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           R G + +I TYNALI GLCK+GK ++A  +++  +   L  +  TY+ +IT  C + +  
Sbjct: 389 REGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHIT 448

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L+  M  +GC P+ H +  L++ +CQ    + + ++  + L   + P     + + 
Sbjct: 449 YALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMI 508

Query: 516 SGLHHCGKDELAMKLFRKMEIRG 538
           +G    GK   A+++F +M   G
Sbjct: 509 AGYCKVGKSTSALRVFERMVQNG 531



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 157/345 (45%), Gaps = 36/345 (10%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           ++ + +  + +FR+ ++ F +M + G  P + +   ++  L     V  A    +EM   
Sbjct: 225 VIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAK 284

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVF------------------------------- 286
            + PNVYT   +++  CK+G  ERA  +F                               
Sbjct: 285 GLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344

Query: 287 -----KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
                  M   G  P+  TY TLISGHC +G  + A +  N M + G QPN+ T+N LI 
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALID 404

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CKKGK+ EA ++        +  + VTY  +I  + + G+      L+  M  NG   
Sbjct: 405 GLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHP 464

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI TY  LI   C++ + +++  L        LVP   TY+++I G C    S  A +++
Sbjct: 465 DIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVF 524

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           + M+++GC+ +   +  L+S  C+    + A  +   ML+K + P
Sbjct: 525 ERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLVP 569



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 3/339 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   Y    K   A     +M + G  P   +    +S        + A     +MR
Sbjct: 329 YTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMR 388

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    PN+YT N ++   CK G I+ A +V +   + G      TY  +I+ HC +G ++
Sbjct: 389 REGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHIT 448

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   N M +NG  P++ T+ TLI  +C++ ++ E+ ++F +  A  + P   TY ++I
Sbjct: 449 YALDLFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMI 508

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY +VG S     ++E M++NG + D +TY ALI GLCKE + ++A  L + +    LV
Sbjct: 509 AGYCKVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDKRLV 568

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   T   L    C R+ +  A  +   + +   R   H   +L+         + A+  
Sbjct: 569 PCEVTPVTLAFEYCRREKAVVAVSILDRLDK---RRKNHTVNVLVRKLSAIGHVEDASLF 625

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L + L+  +A D +  +   +  +   K  LA ++  K+
Sbjct: 626 LKKALDVDLAVDRLAYTSFINSCYANKKYALATEISEKI 664



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/386 (28%), Positives = 179/386 (46%), Gaps = 16/386 (4%)

Query: 165 GILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL-LFKTYAHRKKFRN-------ATDTF 216
           G +D+D   L     D+I+    + DS+     L LF+  A R+  R+       A  TF
Sbjct: 47  GAVDTDPGALAPD--DAIVALSSLADSAGSAAALELFRRLASRQDVRHLMRLYVTAATTF 104

Query: 217 CQMRDYGFLPII-ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
               D G LP+  E+  + +++  ++ R+  A     EMR + +   V T N V+ A   
Sbjct: 105 V---DRGSLPMAHEAMRRMVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLD 161

Query: 276 LGIIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
            G    A +VF  M +  G +P   ++  LI G C  G +        +M+  G   +  
Sbjct: 162 TGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNA 221

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T   ++  FC+KG+  + + +F  M      PNVV Y   I+G  +    +    + EEM
Sbjct: 222 TCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEM 281

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYL-VKDLDKNSLVPNASTYSALITGQCVRKN 453
           +  G+K ++ T+ +LI GLCK G T++A  L +K +  +S  PN  TY+ +I G C    
Sbjct: 282 VAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGK 341

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             RA  L   M+  G  PN + +  L+S  C+   F+ A E++ +M  +   P+    + 
Sbjct: 342 LARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA 401

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  GL   GK + A K+ R    +GL
Sbjct: 402 LIDGLCKKGKIQEAYKVLRMANNQGL 427



 Score = 47.4 bits (111), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 90/240 (37%), Gaps = 30/240 (12%)

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKL---HEANRIFSEMKATNVSPNVVTYNTLIN 376
           F+ L  +  ++  +  + T    F  +G L   HEA R                   ++ 
Sbjct: 81  FRRLASRQDVRHLMRLYVTAATTFVDRGSLPMAHEAMR------------------RMVA 122

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI-LGLCKEGKTKKAAYLVKDLD----K 431
            + + G     A +  EM  +G+   + T N ++  GL     T   AY  K  D    +
Sbjct: 123 AFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGL----DTGSFAYARKVFDGMVTR 178

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             L+P+A ++ ALI G C     E    L   M   G   +     +++  FCQ   F  
Sbjct: 179 GGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRD 238

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +E+   MLE    P+ +  +    GL      + A  +  +M  +GL P  +     IN
Sbjct: 239 VSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLIN 298


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 176/400 (44%), Gaps = 38/400 (9%)

Query: 180  DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLS 236
            D  L S  +  ++P       L   YA       AT    ++R+ YG LP +  CN+ L 
Sbjct: 1061 DDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLK 1120

Query: 237  SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
             L++  R D A   Y EM       + Y+  +++   C    +E  +++ +     G IP
Sbjct: 1121 LLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIP 1180

Query: 297  SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
             V  YN LI G+C +G +   +     ME  G  P ++T+ +LI    KKG L +   +F
Sbjct: 1181 HVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLF 1240

Query: 357  SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             EM+    SPNV  YN++I+   +  ++     + ++M  +G   DI+T+N LI GLC E
Sbjct: 1241 LEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHE 1300

Query: 417  GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------- 468
            G  +KA + +++  +  L PN  +Y+ LI G C+R     A  L   M+  G        
Sbjct: 1301 GHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTF 1360

Query: 469  ---------------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
                                         P+ +I+ +L+S  C+      A  +L EMLE
Sbjct: 1361 GALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1420

Query: 502  KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            K + PD  + + L  G         A K+F  ME +G+ P
Sbjct: 1421 KNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICP 1460



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 149/314 (47%), Gaps = 3/314 (0%)

Query: 208  KFRNATDTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
            K R+AT       QM   G  P I + N  ++ L     V  A  F +E  R  ++PN  
Sbjct: 1264 KCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQL 1323

Query: 265  TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
            +   ++H FC  G +  A ++   M   G  P V T+  LI G    G +S A+  +  M
Sbjct: 1324 SYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKM 1383

Query: 325  EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
             +  + P+V  +N LI G CKK  L  A  I  EM   NV P+   Y TLI+G+ +  N 
Sbjct: 1384 TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENL 1443

Query: 385  EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                 ++E M   GI  DI++ NA+I G C+ G   +A   + ++ K   +P+  TY+ +
Sbjct: 1444 GDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTV 1503

Query: 445  ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
            I+G   + N   A +    MI+  C+PN   +  L++ +C+  D D A  +   M  + +
Sbjct: 1504 ISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEAL 1563

Query: 505  APDSIILSELYSGL 518
            +P+ +  + L   L
Sbjct: 1564 SPNVVTYTILIGSL 1577



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 172/388 (44%), Gaps = 35/388 (9%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            C    + +++L   Y  R           +M   GFLP + +    ++ L     ++   
Sbjct: 1178 CIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIG 1237

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + EMR+   SPNV   N V+ A CK     +A+ + K M + G  P + T+NTLI+G 
Sbjct: 1238 SLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGL 1297

Query: 309  CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
            C++G +  A  F     +  + PN +++  LI GFC +G+L  A+ +  EM     +P+V
Sbjct: 1298 CHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDV 1357

Query: 369  VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            VT+  LI+G    G       + E+M    +  D+  YN LI GLCK+     A  ++++
Sbjct: 1358 VTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEE 1417

Query: 429  LDKNSLVPNASTYSALITGQCVRKNSERAFQLYK-------------------------- 462
            + + ++ P+   Y+ LI G    +N   A ++++                          
Sbjct: 1418 MLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGM 1477

Query: 463  ---------SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
                     +M + GC P++  +  ++S + +  + + A   L +M+++   P+ +  S 
Sbjct: 1478 MSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSS 1537

Query: 514  LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L +G    G  + A  LF  M+   L P
Sbjct: 1538 LINGYCKTGDTDFAEGLFANMQAEALSP 1565



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 142/334 (42%), Gaps = 2/334 (0%)

Query: 189  CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
            CD   + F+ L     H    R A     +       P   S    +        + +A 
Sbjct: 1283 CDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVAS 1342

Query: 249  GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                EM     +P+V T   ++H     G +  A+ V + M      P V  YN LISG 
Sbjct: 1343 DLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGL 1402

Query: 309  CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C K +L  A    + ++EKN +QP+   + TLI GF +   L +A +IF  M+   + P+
Sbjct: 1403 CKKRMLPAAKNILEEMLEKN-VQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPD 1461

Query: 368  VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            +V+ N +I GY Q G           M + G   D  TY  +I G  K+G    A   + 
Sbjct: 1462 IVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLC 1521

Query: 428  DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            D+ K    PN  TYS+LI G C   +++ A  L+ +M      PN   + +L+ +  + +
Sbjct: 1522 DMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKD 1581

Query: 488  DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
               RA      ML    +P+ + L  L +GL  C
Sbjct: 1582 KVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSC 1615



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 135/286 (47%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R  + + L +  L   +  R +   A+D   +M   G  P + +    +  L+ + +V  
Sbjct: 1316 RELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSE 1375

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            AL   ++M   ++ P+V   N+++   CK  ++  A  + + M      P    Y TLI 
Sbjct: 1376 ALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLID 1435

Query: 307  GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
            G      L  A K    ME  GI P++++ N +I G+C+ G + EA    S M+     P
Sbjct: 1436 GFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIP 1495

Query: 367  NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +  TY T+I+GY + GN         +M++   K +++TY++LI G CK G T  A  L 
Sbjct: 1496 DEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLF 1555

Query: 427  KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             ++   +L PN  TY+ LI     +    RA   +++M+ + C PN
Sbjct: 1556 ANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPN 1601



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 137/305 (44%), Gaps = 15/305 (4%)

Query: 195  VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            ++++L      ++    A +   +M +    P        +   + SE +  A   ++ M
Sbjct: 1394 IYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFM 1453

Query: 255  RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                I P++ + N ++  +C+ G++  A+    NM  +G IP   TY T+ISG+  +G L
Sbjct: 1454 EHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNL 1513

Query: 315  SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            + A+++   M K   +PNV+T+++LI G+CK G    A  +F+ M+A  +SPNVVTY  L
Sbjct: 1514 NGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTIL 1573

Query: 375  INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL------------CKEGKTK-K 421
            I    +          +E ML N    + +T + L+ GL            C   +   K
Sbjct: 1574 IGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGK 1633

Query: 422  AAYLV--KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A LV  K L  +   P  S Y+A+I   C       A      M + G  PN   F  L
Sbjct: 1634 DALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSL 1693

Query: 480  MSTFC 484
            +  FC
Sbjct: 1694 LYGFC 1698



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 75/177 (42%), Gaps = 15/177 (8%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R C  + + +  L   Y        A   F  M+     P + +    + SL   ++V  
Sbjct: 1526 RKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLR 1585

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAF--CKLGII-------------ERAVEVFKNMES 291
            A  +++ M  N  SPN  TL+ +++    C   +I             +  + VFK +  
Sbjct: 1586 AGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVF 1645

Query: 292  MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
                P  + YN +I   C   +L  A+ FKN M K G  PN ITF +L++GFC  GK
Sbjct: 1646 DIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGK 1702



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 118/312 (37%), Gaps = 73/312 (23%)

Query: 143  HSIVLHILTKNRKFKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
            +++++  L K R   ++++IL  +L+     D F + + L D  + S  + D+   +F+ 
Sbjct: 1395 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEF-VYATLIDGFIRSENLGDARK-IFEF 1452

Query: 199  L---------------FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            +                K Y        A      MR  G +P   +    +S       
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512

Query: 244  VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            ++ AL +  +M + +  PNV T + +++ +CK G  + A  +F NM++    P+V TY  
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572

Query: 304  LISG--------------------HCN----------KGLLS------------------ 315
            LI                      HC+           GL S                  
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1632

Query: 316  ---LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
               L + FK L+   G  P    +N +IF  C+   L EA    + M      PN +T+ 
Sbjct: 1633 KDALLVVFKKLVFDIG-DPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFL 1691

Query: 373  TLINGYGQVGNS 384
            +L+ G+  VG S
Sbjct: 1692 SLLYGFCSVGKS 1703


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 134/497 (26%), Positives = 227/497 (45%), Gaps = 48/497 (9%)

Query: 57  MKMNRNPIPIPHRTLPEPKGQDL--DFVNIAYSHLIHSDWKK--LTALS-THLTPFRVKH 111
           +K    P P P +   +P+  +L  D + + ++H   + W++   T  S + +    V H
Sbjct: 9   IKSKAKPTP-PSKPSLKPRINNLVKDILEVLHTH---NQWEENLQTRFSESEVLASDVAH 64

Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPSS-LTLETHSIVLHILTKNRKFKSSESILRGILDSD 170
           ++L   +D  L L+FF WV   + S  +    +S +L +L ++R F   E +L  +    
Sbjct: 65  LVLDRIRDVELGLKFFDWVSRGQYSGPINGFAYSSLLKLLARSRVFSEMEVVLENM---- 120

Query: 171 SFDLPSKLFDSILYSYRMCDSSPL--VFDLLFKTYAHRKKFRNATDTFC-QMRDYGFLPI 227
                           R+ + SP      ++ + Y+       A + +   ++ Y + P 
Sbjct: 121 ----------------RVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPD 164

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +CN  L+ L+   R++IA  F              T  MV    CK G +E   ++ +
Sbjct: 165 VIACNSLLNMLVKLGRIEIARKF--------------TCIMV-KGLCKEGKLEEGRKLIE 209

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           +    G IP++  YNTLI G+C KG + +A      ++  G  P V T+  +I GFCKKG
Sbjct: 210 DRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKG 269

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
                +R+  EM +  ++ NV  YNT+I+   + G+        E M+  G K DI+TYN
Sbjct: 270 DFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYN 329

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G C++GK  +A  L++      L+PN  +Y+ LI   C +   +RA      M   
Sbjct: 330 TLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTER 389

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+   +  L+       + D A  +  +MLE+ + PD+ I + L SGL    K   A
Sbjct: 390 GHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAA 449

Query: 528 MKLFRKMEIRGLLPKGF 544
             L  +M  + +LP  F
Sbjct: 450 KLLLAEMLDQSVLPDAF 466



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 164/362 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + ++ L   Y  +     A   F +++  GFLP +E+    ++            
Sbjct: 216 CIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAID 275

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    ++ NV   N ++ A  K G I +AVE  + M   G  P + TYNTLISG 
Sbjct: 276 RLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGS 335

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +S A +        G+ PN  ++  LI  +CK+G    A+    EM      P++
Sbjct: 336 CRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDL 395

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY  L++G    G  ++  ++ E+ML  G+  D   YN L+ GLCK+ K   A  L+ +
Sbjct: 396 VTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAE 455

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +   S++P+A  Y+ L+ G     N + A +L++  I  G  P    +  ++  +C+   
Sbjct: 456 MLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGM 515

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
              A   +  M ++ +APD    S +  G       + A K+FR+M      P   D L+
Sbjct: 516 MKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVMDGLQ 575

Query: 549 TI 550
            +
Sbjct: 576 GL 577


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 175/352 (49%), Gaps = 1/352 (0%)

Query: 188 MCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           M  + P++ F+ +  ++A  K +  A     ++   G  P + + N  ++      ++  
Sbjct: 53  MRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITF 112

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                 ++ +    P+  TLN ++   C  G +++A+     + + GF  +  +Y TLI+
Sbjct: 113 GFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 172

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G    A+KF   ++    +P+V+ +NT+I   CK   + EA  +FSEM    +S 
Sbjct: 173 GVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISA 232

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYNTLI G+  VG  +    L  EM+   I  ++ TYN L+  LCKEGK K+A  ++
Sbjct: 233 DVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + K  + P+  TYS L+ G  +    ++A  ++ +M   G  P+ H + +L++ FC+N
Sbjct: 293 AVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKN 352

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D A  +  EM +K M P  +  S L  GL   G+      L  +M  RG
Sbjct: 353 KMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRG 404



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 169/354 (47%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R+     ++++ +       +    A   F +M   G    + + N  +       ++  
Sbjct: 193 RLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKE 252

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+G   EM    I+PNVYT N+++ A CK G ++ A  V   M      P V TY+TL+ 
Sbjct: 253 AIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMD 312

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+     +  A    N M   G+ P+V T+  LI GFCK   + EA  +F EM   N+ P
Sbjct: 313 GYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVP 372

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +VTY++LI+G  + G       L +EM   G   D++TY++LI GLCK G   +A  L 
Sbjct: 373 GIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 432

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +    + PN  T++ L+ G C     + A ++++ ++  G   N + + ++++  C+ 
Sbjct: 433 NKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 492

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              + A  +L +M +    P++     +   L    +++ A KL R+M  RGLL
Sbjct: 493 GLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 165/351 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  ++L   + H  +         ++   G+ P   + N  +  L    +V  AL F+ +
Sbjct: 95  ITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDK 154

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       N  +   +++  CK+G    A++  + ++     P V  YNT+I   C   L
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQL 214

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A    + M   GI  +V+T+NTLI+GFC  GKL EA  + +EM    ++PNV TYN 
Sbjct: 215 VSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++   + G  +   S+   ML+  +K D++TY+ L+ G     + KKA ++   +    
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  TY+ LI G C  K  + A  L+K M +    P    +  L+   C++       
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +++ EM ++    D I  S L  GL   G  + A+ LF KM+ + + P  F
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIF 445



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 143/292 (48%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ F +++      P+V   N ++ A CK  ++  A  +F  M   G    V TYNTLI 
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A+   N M    I PNV T+N L+   CK+GK+ EA  + + M    V P
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +V+TY+TL++GY  V   +    ++  M   G+  D+ TY  LI G CK     +A  L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           K++ + ++VP   TYS+LI G C        + L   M   G   +   +  L+   C+N
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              DRA  +  +M ++ + P+    + L  GL   G+ + A ++F+ +  +G
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 474



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 138/300 (46%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           + VD A+  +  M   R +P +   N ++ +F K+     AV +   +E  G  P + T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           N LI+  C+ G ++        + K G  P+ +T NTLI G C KG++ +A     ++ A
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
                N V+Y TLING  ++G++        ++     K D++ YN +I  +CK     +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L  ++    +  +  TY+ LI G C+    + A  L   M+     PN + + +L+ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+      A  VL  ML+ C+ PD I  S L  G     + + A  +F  M + G+ P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 171/357 (47%), Gaps = 36/357 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  LSSL+ ++     +  +K+ + N ++PN+ TLN++++ FC L  I  A  VF N+  
Sbjct: 97  DNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILK 156

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG---- 347
            G+ P   T NTLI G C  G +  A+ F + +   G Q + +++ TLI G CK G    
Sbjct: 157 RGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 216

Query: 348 -------------------------------KLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                                          ++ +A  ++SEM    +SPNV TYNTLI 
Sbjct: 217 VARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIY 276

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +GN +   SL  EM    I  D+ T+N LI  L KEGK  +A  L +++   ++ P
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFP 336

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           N  TY++LI G C   + ERA  L K M   G +P+ + + +L+   C+    + A +  
Sbjct: 337 NIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFF 396

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
             +L K    +    + + +GL   G     M L  KME +G +P      +TI CA
Sbjct: 397 QHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAI-TFKTIICA 452



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 161/345 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            ++L   + H      A   F  +   G+ P   + N  +  L     +  AL F+ ++ 
Sbjct: 131 LNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVV 190

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  +   +++  CK G  +    + + +E     P V  Y T+I   C    + 
Sbjct: 191 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVG 250

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M   GI PNV T+NTLI+GFC  G L EA  + +EMK  N++P+V T+N LI
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI 310

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G  +   SL+EEM    +  +I+TY +LI GLCK    ++A  L K + +  + 
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  +Y+ L+   C     E A Q ++ ++  G   N   + ++++  C+   F    ++
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +M  K   PD+I    +   L    +++ A K  R+M  RGLL
Sbjct: 431 KSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGLL 475



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 147/317 (46%), Gaps = 2/317 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R  P  +  + ++ +  K       + +FK  +S G  P++ T N LI+
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             C+   ++ A   F N++ K G  P+ IT NTLI G C  G++  A     ++ A    
Sbjct: 137 CFCHLAHITFAFSVFANIL-KRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQ 195

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            + V+Y TLING  + G ++  A L  ++  + +K D++ Y  +I  LCK  +   A  L
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++    + PN  TY+ LI G C+  N + AF L   M      P+ + F +L+    +
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGK 315

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
               D A  +  EM  K M P+ +  + L  GL      E A+ L +KM+ +G+ P  + 
Sbjct: 316 EGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYS 375

Query: 546 KLRTINCAPENGEKESG 562
               ++   + G  E+ 
Sbjct: 376 YTILLDALCKGGRLENA 392



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)

Query: 140 LETHSI---------VLHILTKNRKFKS-----SESILRGILDSDSFDLPSKLFD----- 180
           LE HS+         ++H L KN++        SE I++GI   + F   + ++      
Sbjct: 224 LEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGI-SPNVFTYNTLIYGFCIMG 282

Query: 181 ------SILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
                 S+L   ++ + +P V  F++L        K   A   F +M+     P I +  
Sbjct: 283 NLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYT 342

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +  L  +  ++ A+   K+M+   I P+VY+  +++ A CK G +E A + F+++   
Sbjct: 343 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVK 402

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+  +V TYN +I+G C  GL    M  K+ ME  G  P+ ITF T+I    +K +  +A
Sbjct: 403 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 462

Query: 353 NRIFSEMKA 361
            +   EM A
Sbjct: 463 EKFLREMIA 471


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 171/334 (51%), Gaps = 13/334 (3%)

Query: 197 DLLFKTYAHR-KKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +L  K+ +H  K   +A D F  M R   F   ++ CNK +   +   R D+A+  Y++M
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKM 132

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
              RI  N+Y+ N+++  FC    +  ++  F  +  +GF P V T+NTL+ G C +  +
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192

Query: 315 SLAMKFKNLMEKN----------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           S A+     M +           G+ P VITFNTLI G C +G++ EA  + ++M    +
Sbjct: 193 SEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 252

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             +VVTY T++NG  ++G+++   +L  +M    IK D++ Y+A+I  LCK+G    A Y
Sbjct: 253 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 312

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L  ++ +  + PN  TY+ +I G C       A +L + MI     P+   F  L+S   
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +      A ++  EML +C+ PD++  + +  G 
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 406



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 170/382 (44%), Gaps = 41/382 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG------ 249
           F++L K +    K   +  TF ++   GF P + + N  L  L   +R+  AL       
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 250 ----FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                + +M    ++P V T N +++  C  G +  A  +   M   G    V TY T++
Sbjct: 204 ETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 263

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G C  G    A+   + ME+  I+P+V+ ++ +I   CK G   +A  +FSEM    ++
Sbjct: 264 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 323

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNV TYN +I+G+   G       L  +M+   I  D+LT+NALI    KEGK  +A  L
Sbjct: 324 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 383

Query: 426 VKDLDKNSLVPNASTYSALITG-------------------------------QCVRKNS 454
             ++    + P+  TY+++I G                                C  K  
Sbjct: 384 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 443

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           +   QL + + R G   N   +  L+  FC+ ++ + A ++  EM+   + PD+I  + L
Sbjct: 444 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 503

Query: 515 YSGLHHCGKDELAMKLFRKMEI 536
             G     K E A++LF  +++
Sbjct: 504 LYGFCENEKLEEALELFEVIQM 525



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 143/294 (48%), Gaps = 8/294 (2%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + EM    I+PNV+T N ++  FC  G    A  + ++M      P V T+N LIS   
Sbjct: 313 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 372

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A K  + M    I P+ +T+N++I+GFCK  +  +A  +F  M     SP+VV
Sbjct: 373 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVV 428

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+NT+I+ Y +    + G  L  E+ R G+  +  TYN LI G C+      A  L +++
Sbjct: 429 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             + + P+  T + L+ G C  +  E A +L++ +  S    +   + +++   C+    
Sbjct: 489 ISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKV 548

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           D A ++   +    + PD    + + SG   CGK  +  A  LF KM+  G  P
Sbjct: 549 DEAWDLFCSLPIHGVEPDVQTYNVMISGF--CGKSAISDANVLFHKMKDNGHEP 600



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +S+ +   ++  A     EM    I P+  T N +++ FCK    + A  +
Sbjct: 359 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 418

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M S    P V T+NT+I  +C    +   M+    + + G+  N  T+NTLI GFC+
Sbjct: 419 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 474

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              L+ A  +F EM +  V P+ +T N L+ G+ +    E    L+E +  + I +D + 
Sbjct: 475 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 534

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN +I G+CK  K  +A  L   L  + + P+  TY+ +I+G C +     A  L+  M 
Sbjct: 535 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 594

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            +G  P+   +  L+    +  + D++ E++ EM     + D+  +
Sbjct: 595 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 640



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L F+ L        K   A     +M      P   + N  +       R D A    K 
Sbjct: 362 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 417

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V T N ++  +C+   ++  +++ + +   G + + TTYNTLI G C    
Sbjct: 418 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 477

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A      M  +G+ P+ IT N L++GFC+  KL EA  +F  ++ + +  + V YN 
Sbjct: 478 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 537

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +    +    L+  +  +G++ D+ TYN +I G C +     A  L   +  N 
Sbjct: 538 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 597

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             P+ STY+ LI G       +++ +L   M  +G   +    +M+
Sbjct: 598 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 643



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    + FD    +FD       M     + F+ +   Y   K+         ++ 
Sbjct: 401 SMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 454

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +    + + ++ A   ++EM  + + P+  T N++++ FC+   +E
Sbjct: 455 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 514

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E+F+ ++          YN +I G C    +  A      +  +G++P+V T+N +I
Sbjct: 515 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 574

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC K  + +AN +F +MK     P+  TYNTLI G  + G  +    L  EM  NG  
Sbjct: 575 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 634

Query: 401 VDILTYNALILGLCKEGKTKKA 422
            D  T   ++  L  +G+  K+
Sbjct: 635 GDAFTIK-MVADLITDGRLDKS 655


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +LL ++     +  +    F  +   G  P   + NK + + + +  +D+AL   + M R
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGR 185

Query: 257 NRISP--NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +  +P  + ++ N+V+    + G    A++VF  M  MG +P+  TYNT+I GH   G L
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 245

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
               + ++ M  +G +PN++T+N L+ G C+ G++ E   +  EM + ++ P+  TY+ L
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 305

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
            +G  + G S    SL+ E L+ G+ +   T + L+ GLCK+GK  KA  +++ L    L
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP    Y+ LI G C  ++   AF +++ M     RP+   +  L++  C+ E   +A +
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +++EM +  + P     + L       G+ E    +   M+ +G+
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 3/329 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P     N  ++       +  A   +++M+   I P+  T N +++  CKL ++ +A
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 423

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++   ME  G  PSV T+NTLI  +   G L       + M++ GI+ +VI+F +++  
Sbjct: 424 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 483

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCK GK+ EA  I  +M   +V+PN   YN++I+ Y + G++E    L E+M  +G+   
Sbjct: 484 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 543

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ GLC+  +  +A  L+  L    L P+  +Y+ +I+  C + ++++A +L +
Sbjct: 544 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 603

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G RP    +  L+S             +  +ML K + P S I   +      C 
Sbjct: 604 EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 663

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            D     L ++M  +G+    FD  +  N
Sbjct: 664 NDSKVASLKKEMSEKGI---AFDDTKRSN 689



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 156/294 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  + E  +  +    YT +++++  CK G + +A +V + +   G +P+   YNTLI+G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C    L  A      M+   I+P+ IT+N LI G CK   + +A  +  EM+ + V P+
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG  G  E   ++  +M + GIK D++++ +++   CK GK  +A  ++ 
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    + PNA  Y+++I       ++E+AF L + M  SG   +   + +L+   C++ 
Sbjct: 499 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 558

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D A E++  +  + + PD +  + + S   + G  + A++L ++M   G+ P
Sbjct: 559 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 9/369 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        K  +A   F +M D G +P   + N  +   +    ++       +M 
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +   PN+ T N+++   C+ G ++    +   M S    P   TY+ L  G    G   
Sbjct: 257 HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 316

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +       K G+     T + L+ G CK GK+ +A ++   +  T + P  V YNTLI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 376

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY QV +      ++E+M    I+ D +TYNALI GLCK     KA  LV +++K+ + 
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI         E+ F +   M + G + +   F  ++  FC+N     A  +
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLPKGFDK 546
           L +M+ K +AP++ + + +       G  E A  L  KM+  G         LL KG  +
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 556

Query: 547 LRTINCAPE 555
              I+ A E
Sbjct: 557 SSQIDEAEE 565



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 149/319 (46%), Gaps = 2/319 (0%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP + SCN  L SLL   R       +  +      P+ +  N V+ A    G ++ A+ 
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 285 VFKNM-ESMGFIP-SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           + + M  S G  P    +YN +I+G    G  S A+K  + M   G+ PN IT+NT+I G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             K G L    R+  +M      PN+VTYN L++G  + G  +    L +EM  + +  D
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
             TY+ L  GL + G+++    L  +  K  ++  A T S L+ G C      +A Q+ +
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            ++ +G  P   I+  L++ +CQ  D   A  +  +M  + + PD I  + L +GL    
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A  L  +ME  G+ P
Sbjct: 419 MVTKAEDLVMEMEKSGVDP 437



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 122/257 (47%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D   +M   G  P +E+ N  + +   + +++       +M++  I  +V +   V+ 
Sbjct: 423 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 482

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           AFCK G I  AV +  +M      P+   YN++I  +   G    A      M+ +G+  
Sbjct: 483 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 542

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++T+N L+ G C+  ++ EA  +   ++   + P+VV+YNT+I+     G+++    L 
Sbjct: 543 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 602

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM + GI+  + TY+ L+  L   G+      L + +   ++ P++S Y  ++      
Sbjct: 603 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 662

Query: 452 KNSERAFQLYKSMIRSG 468
           +N  +   L K M   G
Sbjct: 663 ENDSKVASLKKEMSEKG 679



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S  + F  + K +    K   A      M      P  +  N  + + ++S   + A   
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 531

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            ++M+ + +S ++ T N+++   C+   I+ A E+   + + G  P V +YNT+IS  CN
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG    A++    M K GI+P + T++TL+      G++H+   ++ +M   NV P+   
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           Y  +++ Y +  N    ASL +EM   GI  D
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 106/246 (43%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D S   F+ L   Y    +          M+  G    + S    + +   + ++  A+ 
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M    ++PN    N ++ A+ + G  E+A  + + M++ G   S+ TYN L+ G C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A +    +   G++P+V+++NT+I   C KG   +A  +  EM    + P + 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+TL++     G       LY++ML   ++     Y  ++    +     K A L K++
Sbjct: 616 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 430 DKNSLV 435
            +  + 
Sbjct: 676 SEKGIA 681



 Score = 48.1 bits (113), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 2/181 (1%)

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++ + N L+     VG      + +  ++  G + D   +N ++      G    A  +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 426 VKDLDKNSLVP--NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           V+ + ++   P  +A +Y+ +I G         A +++  M+  G  PN   +  ++   
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            +  D +    +  +ML     P+ +  + L SGL   G+ +    L  +M    + P G
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 544 F 544
           F
Sbjct: 300 F 300


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 195/410 (47%), Gaps = 24/410 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           +++ +L  L K  ++  +E ++R ++       P    D + YS             L  
Sbjct: 47  SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTP----DLVTYS------------TLLS 90

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K   + +   ++   G  P      K ++SL  S R+  AL   +EM R    P
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP 150

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
            + T N ++   C+   +E A  + + M + G    V TYNTL+ G C  G L  A +  
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+ +G  P+V+ +++ ++G CK GK+  A+++  +M+ ++  PNVVTYNT+++G  + 
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKS 270

Query: 382 GNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           G  +    + E+M   +G  ++++ Y+ ++ GLCK G+T++A  +++ + +    P+  T
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM- 499
           YS+L+ G C     E A +  + M   GC+PN   +  L+   C       A  ++ EM 
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390

Query: 500 -----LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                 + C  P     + L  GL   G+ + A+K F++M  +G  P G 
Sbjct: 391 SGGGGGDHC-PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 168/356 (47%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + F+ L   ++ + +  +       M   G  P + S N  L  L   ER   A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 249 GFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
              ++M  R  R +P++ T + ++  +CK G +E + E+ K + S G  P    Y  +++
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C    L  A++    M + G  P +ITFNTLI G C++  L  A+ +   M A+ V  
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYNTL++G  + G  +    L E M  +G   D++ Y++ + GLCK GK   A  ++
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQ 485
           + +  +   PN  TY+ ++ G C     + A ++ + M  S GC  N   +  ++   C+
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 A  V+  M      PD +  S L +GL   GK E A++  R+M + G  P
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 154/307 (50%), Gaps = 6/307 (1%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + N  +S     + +++A    + M  + +  +V T N +M   CK G ++ A
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++ + M++ G  P V  Y++ + G C  G +  A +    M  +   PNV+T+NT++ G
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDG 266

Query: 343 FCKKGKLHEANRIFSEMKATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            CK GK+  A  +  +M +++    NVV Y+T+++G  ++G ++   S+ E M R G + 
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TY++L+ GLCK GK ++A   V+++      PNA TY +L+ G C       A ++ 
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386

Query: 462 KSMIRSG-----CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           + M   G     C P+   +  L+   C+    D A +    M  +   PD +  S +  
Sbjct: 387 EEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE 446

Query: 517 GLHHCGK 523
           GL   G+
Sbjct: 447 GLARSGR 453



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 25/361 (6%)

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESILRGI----LDSDSFDLPSKLFDSILYSYRM--- 188
           S+  L T+S +L    K  K + S  +L+ +    L  D+  + +K+  S+  S R+   
Sbjct: 78  STPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL-MYTKVMASLCKSARLGEA 136

Query: 189 -----------CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
                      C  + + F+ L       K    A      M   G    + + N  +  
Sbjct: 137 LELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDG 196

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
           L  + R+  A    + M+ +  +P+V   +  ++  CK G +  A +V + M      P+
Sbjct: 197 LCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPN 256

Query: 298 VTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           V TYNT++ G C  G +  A++  + +   +G   NV+ ++T++ G CK G+  EA  + 
Sbjct: 257 VVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVM 316

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M      P+VVTY++L+NG  + G  E       EM   G K + +TY +L+ GLC  
Sbjct: 317 EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSC 376

Query: 417 GKTKKAAYLVKDL-----DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G+  +A  +V+++       +   P+ STY+ALI G C     + A + ++ M   GC P
Sbjct: 377 GRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDP 436

Query: 472 N 472
           +
Sbjct: 437 D 437



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 11/305 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G     + ++   L  ++  S    D   + ++ L        + + A     +M+
Sbjct: 157 TLISGCCREKNLEMADSLLQTMAASGVKADV--VTYNTLMDGLCKAGRLQEAEQLLERMK 214

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + + + F+  L  S +V  A    ++MR +   PNV T N ++   CK G I+
Sbjct: 215 ASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKID 274

Query: 281 RAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            A+E+ + M S  G   +V  Y+T++ G C  G    A      M + G +P+V+T+++L
Sbjct: 275 TALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSL 334

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G CK GK+ EA     EM      PN VTY +L++G    G       + EEM   G 
Sbjct: 335 VNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGG 394

Query: 400 KVD-----ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             D     + TYNALI GLCK G+   A    + +      P+  +YS ++ G      S
Sbjct: 395 GGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL---ARS 451

Query: 455 ERAFQ 459
            RA Q
Sbjct: 452 GRALQ 456



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 2/248 (0%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+  G  P+  T+N L++G   +G      +    M   GIQPNV+++N L+ G CK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 349 LHEANRIFSEM--KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            HEA  +  +M  +    +P++VTY+TL++GY + G  E    L +E++  G++ D L Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             ++  LCK  +  +A  L++++ +    P   T++ LI+G C  KN E A  L ++M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SG + +   +  LM   C+      A ++L  M     APD +  S    GL   GK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 527 AMKLFRKM 534
           A ++  +M
Sbjct: 241 AHQVLEQM 248



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 46/330 (13%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R    PN  T N +++ F K G       + + M + G  P+V +YN L+ G C    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 314 LSLAMKF-KNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSE------------- 358
              A +  ++++ + G   P+++T++TL+ G+CK GK+ E+  +  E             
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 359 ----------------------MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                                 M      P ++T+NTLI+G  +  N EM  SL + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           +G+K D++TYN L+ GLCK G+ ++A  L++ +  +   P+   YS+ + G C       
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL----- 511
           A Q+ + M  S   PN   +  ++   C++   D A    LEM+E+  + D   L     
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGY 296

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S +  GL   G+ + A  +   M   G  P
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRP 326



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 138/306 (45%), Gaps = 32/306 (10%)

Query: 128 TWVQTHKPSSLTLE--THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYS 185
           + +QT   S +  +  T++ ++  L K  + + +E +L  +  S          D + YS
Sbjct: 173 SLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAP------DVVAYS 226

Query: 186 ---YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
              Y +C S                K  NA     QMRD    P + + N  L  L  S 
Sbjct: 227 SFVYGLCKSG---------------KVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSG 271

Query: 243 RVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ++D AL   ++M   +    NV   + V+   CKLG  + A  V + M   G  P V TY
Sbjct: 272 KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTY 331

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           ++L++G C  G +  A++    M   G +PN +T+ +L+ G C  G+L EA R+  EM +
Sbjct: 332 SSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSS 391

Query: 362 T-----NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
                 +  P+V TYN LI G  + G  +     ++ M   G   D ++Y+ ++ GL + 
Sbjct: 392 GGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARS 451

Query: 417 GKTKKA 422
           G+  +A
Sbjct: 452 GRALQA 457


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 174/344 (50%), Gaps = 7/344 (2%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           CQ+  + +  +I    +       S ++D A+  ++EM+     P+ YT   +++A  K 
Sbjct: 96  CQLDRFAYNVLIRYFGR-------SGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKA 148

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A   F  M   G  P++ TYN L+      G L +A+     M++ G QP+V+T+
Sbjct: 149 GRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTY 208

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N L+   C  G++  A ++F +M     SP+  TY+TL+NG G+ G  E    ++ EM+ 
Sbjct: 209 NILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVD 268

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+ VD++ YN+L+  L K G   +   L+K++ +    P+A +++ ++         + 
Sbjct: 269 RGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDA 328

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +++  M+ SGC+P+   + +L+ ++ +  D  +A ++L EM+E    P++   + L  
Sbjct: 329 AREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIH 388

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            L   G+ + A  +  +ME  G  P      R ++   + GE +
Sbjct: 389 WLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 178/353 (50%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      +++L + +    +  +A + F +M+  G  P   +    +++L  + RV  A 
Sbjct: 96  CQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEAR 155

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
            F+  M    ++PN+ T N++M AF K+G ++ A+ +F  M+  GF PSV TYN L+   
Sbjct: 156 SFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDAL 215

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G +  A K  + M  +G  P+  T++TL+ G  K G++ EA+++F EM    V+ ++
Sbjct: 216 CSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDL 275

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V YN+L+    + GN +    L +EM R G   D  ++N ++  L K  K   A  +   
Sbjct: 276 VNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFAR 335

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + ++   P+  +Y+ LI       ++ +A Q+ + M+ +G  P    +  L+     +  
Sbjct: 336 MVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQ 395

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D A  VL EM      PD +  + L   L   G+++ A +LF++M+ +G+ P
Sbjct: 396 VDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEP 448



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 197/419 (47%), Gaps = 17/419 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGI------LDSDSFDLPSKLF------DSILY 184
           S T+   + ++ IL  + +F+ +E + + +      LD  ++++  + F      DS + 
Sbjct: 62  SPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAME 121

Query: 185 SYR---MCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
            +R   +  S P    +  L        + + A   F  M + G  P I + N  + +  
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
              ++D+ALG + EM+R    P+V T N+++ A C  G +  A ++F  M   G  P   
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY+TL++G    G +  A K    M   G+  +++ +N+L+    K G +    ++  EM
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                 P+  ++NT+++  G+    +    ++  M+ +G K D+++YN LI    + G  
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  +++++ +   +P   TY++LI         + AF + + M  +GCRP+   +  L
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           M    +  +  RAA +  +M +K + PD++  +    GL    + + A+ LF+ M+  G
Sbjct: 422 MDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVG 480



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 156/335 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++LL   +    +   A   F +M+  GF P + + N  L +L  + RV  A   + +M 
Sbjct: 173 YNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMT 232

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +  SP+ YT + +++   K G +E A +VF+ M   G    +  YN+L++     G + 
Sbjct: 233 GDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMD 292

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              K    M + G  P+  +FNT++    K  K   A  +F+ M  +   P++++YN LI
Sbjct: 293 RVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILI 352

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + Y + G++     + EEM+  G   +  TYN+LI  L  +G+  +A  ++++++     
Sbjct: 353 DSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCR 412

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+     R  ++RA +L++ M   G  P+   + + +     ++  D A  +
Sbjct: 413 PDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVL 472

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
             +M       D  +   L    H  G  EL  +L
Sbjct: 473 FKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 4/287 (1%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA- 317
           + PN  TL  ++ A+ +      A ++F   ES    P+V  +  LI    N G    A 
Sbjct: 28  LRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAE 85

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           + +K L++K G Q +   +N LI  F + G+L  A  +F EMK     P+  TY  L+N 
Sbjct: 86  LVYKKLVQK-GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNA 144

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
            G+ G  +   S ++ ML  G+  +I TYN L+    K G+   A  L  ++ +    P+
Sbjct: 145 LGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPS 204

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ L+   C       A +L+  M   GC P+ + +  L++   ++   + A +V  
Sbjct: 205 VVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFR 264

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           EM+++ +A D +  + L + L   G  +   KL ++M  +G  P  F
Sbjct: 265 EMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      +  L        +   A   F +M D G    + + N  L++L  +  +D   
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              KEM R    P+ ++ N +M A  K    + A EVF  M   G  P + +YN LI  +
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G  + A +    M + G  P   T+N+LI      G++ EA  +  EM+     P+V
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN L++  G+ G ++  A L+++M   G++ D L+Y   I GL  + +  +A  L KD
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +       + + Y  LI       ++E   QL
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/263 (25%), Positives = 109/263 (41%)

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           GI++    + K M + G      T   LI+ +        A    N  E     P V  F
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAF 68

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             LI      G+   A  ++ ++       +   YN LI  +G+ G  +    ++ EM  
Sbjct: 69  TKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKI 128

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G + D  TY  L+  L K G+ ++A      + +  L PN  TY+ L+         + 
Sbjct: 129 KGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDM 188

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L+  M R G +P+   + +L+   C       A ++  +M     +PDS   S L +
Sbjct: 189 ALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVN 248

Query: 517 GLHHCGKDELAMKLFRKMEIRGL 539
           GL   G+ E A K+FR+M  RG+
Sbjct: 249 GLGKSGRVEEAHKVFREMVDRGV 271



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 6/242 (2%)

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
           + E   ++PN  T   LI  + +  K  +A  +F++ ++   SP V  +  LI+     G
Sbjct: 22  VAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSG 79

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             E    +Y+++++ G ++D   YN LI    + G+   A  + +++      P+  TY 
Sbjct: 80  EFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYG 139

Query: 443 ALIT--GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
            L+   G+  R    R+F  + +M+  G  PN   + +LM  F +    D A  +  EM 
Sbjct: 140 FLVNALGKAGRVQEARSF--FDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
            +   P  +  + L   L   G+   A KLF KM   G  P  +     +N   ++G  E
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 561 SG 562
             
Sbjct: 258 EA 259



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 83/198 (41%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ +        K   A + F +M + G  P + S N  + S         A    +EM 
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P   T N ++H     G ++ A  V + ME+ G  P V TYN L+     +G   
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M+  G++P+ +++   I G     +L EA  +F +MKA     +   Y  LI
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492

Query: 376 NGYGQVGNSEMGASLYEE 393
               + G++E+ A L  E
Sbjct: 493 RAAHRAGDTELEAQLKHE 510


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 169/303 (55%), Gaps = 3/303 (0%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + SL  +  +  AL  ++ M+     P++ T N+++++ C  G   +A+++F++M+    
Sbjct: 17  VQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKR 76

Query: 295 I-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           + P   TYNTLISG C+ G    A K  + M    I  NV T++++I    K+ K  E+ 
Sbjct: 77  VEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESY 136

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           ++  EM A   +P+V  +N ++ G+ +  N E    +Y+ M+ +G K D ++Y+ LI GL
Sbjct: 137 KVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGL 196

Query: 414 CKEGKTKKAAYLVKDLDKNSL--VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            K GK  ++  ++ ++   +   VPN  T+S LI G C     E+A +++ SM+ +GC+P
Sbjct: 197 AKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 256

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           NK+ +  L++  C+ E   +A E+  +M + C+ PD++  + L +G    G  + A KL+
Sbjct: 257 NKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 316

Query: 532 RKM 534
           R+M
Sbjct: 317 REM 319



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 180/356 (50%), Gaps = 4/356 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C  S + +++L  +  +  +F  A D F  M R+    P   + N  +S L  S   + A
Sbjct: 41  CVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGA 100

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
                EMR   I+ NV+T + ++ +  K    E + +V + M + G  P V  +N ++ G
Sbjct: 101 RKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQG 160

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE--MKATNVS 365
                 +  A +    M ++G +P+ ++++ LI G  K GKL E+ +I SE  M+A    
Sbjct: 161 FARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYV 220

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNV+T++TLI+G  + G  E    ++  ML  G K +  TY  LI GLC+  K  +A  L
Sbjct: 221 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQAREL 280

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFC 484
            + + +  + P+A  Y++LI G C R + + A +LY+ M   +G +P    F  L+  FC
Sbjct: 281 FEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFC 340

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +     RA E++ EM  K +A D+     L +GL    K + A++++++M  +  L
Sbjct: 341 KLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFL 396



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 148/294 (50%), Gaps = 3/294 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+     F+ + + +A       A + +  M + G+ P   S +  +  L    ++D +L
Sbjct: 147 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 206

Query: 249 GFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               EM  R     PNV T + ++H  C+ G +E+A+EVF +M   G  P+  TY TLI+
Sbjct: 207 KILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIA 266

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVS 365
           G C    +  A +    M +  I P+ + +N+LI G+CK+G + EA +++ EM     + 
Sbjct: 267 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 326

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P +VT+NTLI+G+ ++G       L  EM   G+  D  TY  LI GL +  K  +A  +
Sbjct: 327 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEV 386

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            K + +   + +  +  + + G C   N ++A+ ++++  +SG  PN   F +L
Sbjct: 387 YKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRIL 440



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/248 (27%), Positives = 124/248 (50%), Gaps = 3/248 (1%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y+ ++      G+L+ A++    M+     P+++T+N LI   C  G+  +A  +F  M
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 360 K-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           K    V P+  TYNTLI+G    GN+E    L  EM    I  ++ TY+++I  L KE K
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            +++  +++++      P+   ++ ++ G     N E+A ++Y+ M+ SG +P+   + +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMA--PDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
           L+    +    D + ++L EM  +     P+ I  S L  GL   G+ E A+++F  M  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 537 RGLLPKGF 544
            G  P  +
Sbjct: 252 AGCKPNKY 259



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 108/235 (45%), Gaps = 1/235 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A + F  M + G  P   +    ++ L  +E+V  A   +++
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKG 312
           M +  I P+    N ++  +CK G ++ A ++++ M    G  P++ T+NTLI G C  G
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A +    M   G+  +  T+  LI G  +  KL EA  ++ +M+      + V+  
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCV 403

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           + + G  + GN +   +++E   ++G   +  T+  L   L K G+ + A  L++
Sbjct: 404 SFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 65/321 (20%)

Query: 86  YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQK-DYVLSL--EFFTWVQTHKPSSLTLET 142
           Y H++ S +K    +S H+    + H L K+ K D  L +  E       + P+ +T  T
Sbjct: 174 YQHMVESGYKP-DNVSYHI----LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFST 228

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKT 202
                              ++ G+  +   +   ++F S+L +   C  +   +  L   
Sbjct: 229 -------------------LIHGLCRTGELEKALEVFGSMLEA--GCKPNKYTYTTLIAG 267

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISP 261
               +K   A + F +M      P   + N  ++       +D A   Y+EM     + P
Sbjct: 268 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 327

Query: 262 NVYTLNMVMHAFCKLGIIERA-----------------------------------VEVF 286
            + T N ++  FCKLG + RA                                   +EV+
Sbjct: 328 TIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVY 387

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           K M    F+    +  + + G C  G +  A        K+G  PN  TF  L     K 
Sbjct: 388 KQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKL 447

Query: 347 GKLHEANRIFSEMKATNVSPN 367
           G++ +A ++    KA +++  
Sbjct: 448 GRVEDAQKLMEPAKARDITAQ 468


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 150/293 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++++        +  +A +    +  YG  P   S N  L  L  +ER + A 
Sbjct: 12  CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              +EM      PNV T NM++   C+ G++E A+EV + +   G  P+  +YN L+   
Sbjct: 72  KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +  +  AM F  LM   G  P+++++NTL+   C+ G++  A  +  ++K    SP +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++YNT+I+G  + G ++    L +EM+  G++ DI+TY  +  GLC+E K ++A      
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           +    + P    Y+A++ G C R+ +  A  L+  MI +GC PN+  + +L+ 
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVE 304



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 160/329 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +MRD G  P I + N  L+ +    RVD A+ F + +      PN  + N+V+       
Sbjct: 6   EMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAE 65

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             E A ++ + M   G  P+V T+N LIS  C +GL+  AM+    + K G  PN +++N
Sbjct: 66  RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYN 125

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            L+  FCK+ K+ +A      M +    P++V+YNTL+    + G  ++   L  ++   
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G    +++YN +I GL K GKTK+A  L+ ++    L P+  TY+ + +G C     E A
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEA 245

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            + +  +   G RP   ++  ++   C+  +   A ++   M+     P+    + L  G
Sbjct: 246 IRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEG 305

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           L + G  + A  L  ++  RG++ K F K
Sbjct: 306 LAYEGLVKEARDLLGQLCSRGVVNKKFMK 334



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/274 (25%), Positives = 137/274 (50%), Gaps = 2/274 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+G+  ++ ++   KL + +  +++ C  + + F++L      R     A +   Q+  
Sbjct: 57  VLKGLFTAERWEDAEKLMEEM--AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK 114

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           YG  P   S N  L +    +++D A+ F + M      P++ + N ++ A C+ G ++ 
Sbjct: 115 YGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDV 174

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++   ++  G  P + +YNT+I G    G    A++  + M   G+QP++IT+ T+  
Sbjct: 175 AIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIAS 234

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C++ K+ EA R F +++   + P VV YN ++ G  +   +     L+  M+ NG   
Sbjct: 235 GLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMP 294

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  TY  L+ GL  EG  K+A  L+  L    +V
Sbjct: 295 NESTYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 116/224 (51%)

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           MK  + M   G  P++IT+N ++ G C++G++ +A      + +    PN V+YN ++ G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
                  E    L EEM   G   +++T+N LI  LC+ G  + A  +++ + K    PN
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           + +Y+ L+   C +K  ++A    + M+  GC P+   +  L++  C+N + D A ++L 
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++  K  +P  I  + +  GL   GK + A++L  +M  +GL P
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQP 224



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 125/259 (48%)

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++   M   G  P + TYN +++G C +G +  AM+F   +   G +PN +++N ++ G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
                +  +A ++  EM      PNVVT+N LI+   + G  E    + E++ + G   +
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            L+YN L+   CK+ K  KA   V+ +      P+  +Y+ L+T  C     + A  L  
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            +   GC P    +  ++    +      A E+L EM+ K + PD I  + + SGL    
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240

Query: 523 KDELAMKLFRKMEIRGLLP 541
           K E A++ F K++  G+ P
Sbjct: 241 KIEEAIRTFCKVQDMGIRP 259



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 4/171 (2%)

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L +EM   G   DI+TYN ++ G+C+EG+   A   +++L      PN  +Y+ ++ G  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +  E A +L + M   GC PN   F ML+S  C+    + A EVL ++ +    P+S+
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK--GFDKLRTINCAPENGE 558
             + L        K + AM     M  RG  P    ++ L T  C   NGE
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALC--RNGE 171


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 202/440 (45%), Gaps = 20/440 (4%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L  +S+ +  + +  VL + Q D  L    F W       S  L   ++           
Sbjct: 52  LKVISSRIRSYTITSVL-QEQPDTRLGFRLFIW----SLKSWHLRCRTV----------- 95

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
              + I+  ++  ++F+L  K+   +  S     S    F +L + Y+       A ++F
Sbjct: 96  --QDLIIGKLIKENAFELYWKVLQELKNSAIKISSEA--FSVLIEAYSEAGMDEKAVESF 151

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             MRD+   P + + N  L  L+  E   +AL  Y +M +  ++P+V T  +++H  CK 
Sbjct: 152 GLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKT 211

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
              + A+ +F  M   G +P+   Y+ ++SG C    +  A +  + M  +G   ++IT+
Sbjct: 212 CKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITY 271

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N L+ GFCK G L +A  +   +        V+ Y  LING  +    E     Y++MLR
Sbjct: 272 NVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLR 331

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             IK D++ Y  +I GL +EG+  +A  L+ ++ +  L P+   Y+ALI G C     + 
Sbjct: 332 ENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDE 391

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L   + +  C PN H + +L+   C+N   ++A  +  EM +    P  +  + L +
Sbjct: 392 AESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLIN 451

Query: 517 GLHHCGKDELAMKLFRKMEI 536
           GL    + E A  LF +MEI
Sbjct: 452 GLCKANRLEEARLLFYQMEI 471



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 157/345 (45%), Gaps = 18/345 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ ++ +  +   +   A     +M + G  P     N  +    D   +D A     E
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG- 312
           + ++   PN +T ++++   CK G+I +A  +FK ME +G +PSV T+N+LI+G C    
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANR 458

Query: 313 -----LLSLAMK-------FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
                LL   M+       F  L +      ++ +   ++   C+ G + +A ++  ++ 
Sbjct: 459 LEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLV 518

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
            + V P++ TYN LING+ + GN      L++EM   G   D +TY  LI GL + G+ +
Sbjct: 519 DSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNE 578

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  + + + K   VP +STY  ++T  C   N   A  ++   +R           ++ 
Sbjct: 579 DALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVA 638

Query: 481 STFCQNEDFDRAAEVLLEMLEKC----MAPDSIILSELYSGLHHC 521
            +F  NE+   A   LLEM  K     +AP +I L  L      C
Sbjct: 639 ESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDC 682


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 3/270 (1%)

Query: 241 SERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           ++RVD A     +M  +    P++   N+++H FCK G +  A E+ + + SMG +P+  
Sbjct: 152 AQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAV 211

Query: 300 TYNTLISGHCNKGLLSLAMK-FKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           TY TLI G C  G LS A++ FK L  ++   +PNV+TFN LI G CK  +L  A  +  
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +MKA ++  +  TY TL++G  + G +   + ++EEMLR G    ++TY  L+   CK G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             + A  +++ +    + P+ +TY+ L+ G         A + ++ ++R  C P   ++ 
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            L+   C+    D A +  +EML++ +APD
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPD 421



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 176/384 (45%), Gaps = 11/384 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-R 220
           +L  +  +   D    +F  I      C  S +  ++L   +   +    A + F +M +
Sbjct: 44  LLASLCQAGKMDQAMAIFRGI-----QCSPSVITLNILINGFCELQLLDKALELFHEMEK 98

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++  +P   +    +      +R+D A    +E   +  S +V  +  V   FCK   ++
Sbjct: 99  NFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVD 156

Query: 281 RAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            A ++  +M E     P +  +N +I G C  G +  A +    +   G  PN +T+ TL
Sbjct: 157 EAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTL 216

Query: 340 IFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           I GFCK G L EA ++F  + + +    PNVVT+N LI+G  +    E    L ++M   
Sbjct: 217 IDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            ++ D  TY  L+ GLCK+G+T + + + +++ +    P+  TY+ L+   C   + + A
Sbjct: 277 DLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDA 336

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            Q+ +SM+  G  P+   + +L+    +N     A E   ++L +   P +++ S L  G
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
                  + A+K + +M  R L P
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAP 420



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 9/312 (2%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++ L  + R+  A+  Y +M      PN+  +N+++ + C+ G +++A+ +F+ ++   
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFRGIQCS- 67

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEA 352
             PSV T N LI+G C   LL  A++  + MEKN  + P   T+  +I  +CK  +L +A
Sbjct: 68  --PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQA 125

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML-RNGIKVDILTYNALIL 411
            ++  E  ++  S +V+   ++  G+ +    +    L  +M+ +   K DI+ +N +I 
Sbjct: 126 RQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIH 183

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--C 469
           G CK G+ ++A  +++ L     VPNA TY+ LI G C   N   A QL+K +       
Sbjct: 184 GFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHA 243

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            PN   F  L+S  C+ +  + A E++ +M  + +  D+   + L  GL   G+     +
Sbjct: 244 EPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSR 303

Query: 530 LFRKMEIRGLLP 541
           +F +M   G  P
Sbjct: 304 VFEEMLREGCNP 315



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 5/298 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+ RG   +   D   +L   ++   +      + ++++   +    + R A +    + 
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMV-EKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLV 202

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM--RRNRISPNVYTLNMVMHAFCKLGI 278
             G +P   +    +     S  +  AL  +K +  R +   PNV T N ++   CK   
Sbjct: 203 SMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADR 262

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A E+ K M++        TY TL+ G C +G  S   +    M + G  P+V+T+ T
Sbjct: 263 LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+   CK G L +A ++   M A  + P+V TY  L+ G  + G        +E++LR  
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 399 IKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
                + Y+AL+ G CK     +A  Y V+ LD+  L P+ +T   L+   C R  ++
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR-LAPDPATCKLLVEMLCKRGRTD 439



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 40/286 (13%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+  T++ LI+G C  G L  A++  N M +    PN+   N L+   C+ GK+ +A  I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-------------- 401
           F   +    SP+V+T N LING+ ++   +    L+ EM +N   V              
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 402 --------------------DILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNAST 440
                               D++   ++  G CK  +  +A  L+ D+ +K S  P+   
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV--LLE 498
           ++ +I G C       A+++ ++++  GC PN   +  L+  FC++ +   A ++  +L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +    P+ +  + L SGL    + E A +L ++M+ R L    F
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 16/239 (6%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN  TF+ LI G CK G+L EA   +++M   +  PN+   N L+    Q G  +   ++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 391 YEEMLRNGIKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITG 447
           +      GI+    ++T N LI G C+     KA  L  +++KN +LVP A+TY+A+I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-P 506
            C     ++A QL +    S C  +      +   FC+ +  D A ++LL+M+EK  A P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
           D +  + +  G    G+   A ++   +   G +P        I     +G  +SG LS
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI-----DGFCKSGNLS 227


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 204/449 (45%), Gaps = 54/449 (12%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           + E    ++  K  +  L T+S V++   K  +   +  ILR ++  D    P    D +
Sbjct: 60  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGI-AP----DVV 114

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
            Y+         V D L +      K   A +   +M+  G  P   + +  ++   ++ 
Sbjct: 115 TYTS--------VVDGLCRD----GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 162

Query: 243 RVDIALGFYKE-MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           +VD AL  YKE +  +   P+V T   ++  FCK G +E+A+++   ME    +P+V TY
Sbjct: 163 KVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 222

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           ++L+ G C  G L  A+     M   G  PNV+T+ TLI G C   K+  A  +  EM A
Sbjct: 223 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 282

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM--------------------------- 394
           T   P+ V+YN L++GY ++G  E    L++EM                           
Sbjct: 283 TCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEE 342

Query: 395 ----LRN-----GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L N     GI  D++TY+ ++ G  +  +  +AA  ++++   ++ PNA TYS+LI
Sbjct: 343 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 402

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C     + A ++ K+M+     P+   F  ++   C+  D D A ++L+ M    + 
Sbjct: 403 DGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLE 462

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKM 534
           P  +  + L  G    G+ E+A +LF  M
Sbjct: 463 PGMVTYTTLLEGFSRTGRMEIAYELFEVM 491



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 173/350 (49%), Gaps = 4/350 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + ++   +    + + A   F +MR++   P   + N  ++ L  +     A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAY 61

Query: 249 GFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM-GFIPSVTTYNTLIS 306
              KEMR  + ++P++ T + V++ FCK G ++RA E+ + M +  G  P V TY +++ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE-MKATNVS 365
           G C  G +  A +    M+  G++P+  TF+ LI G+C   K+ EA +++ E + +++  
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VVTY  LI+G+ + GN E    +   M       +++TY++L+ GLCK G   +A  L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
            + +     VPN  TY+ LI G C     + A  L   M  + C P+   +  L+  +C+
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
               + A ++  EM  K   PD I  + L  G  +  + E A  L   M+
Sbjct: 302 LGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351



 Score =  145 bits (365), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 143/250 (57%), Gaps = 6/250 (2%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           P+V T+  +I G C    L  A+  F+ + E   + PN  T+N ++ G CK     +A  
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF--VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 355 IFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML-RNGIKVDILTYNALILG 412
           +  EM+   +V+P++VTY+T+ING+ + G  +    +  EM+ R+GI  D++TY +++ G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI-RSGCRP 471
           LC++GK  +A  +V+++    + P+  T+SALITG C  +  + A +LYK ++  S  +P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  L+  FC++ + ++A ++L  M  +   P+ +  S L  GL   G  + A+ LF
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 532 RKMEIRGLLP 541
           R+M  +G +P
Sbjct: 243 RRMTSKGCVP 252



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 16/319 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  +   D    L D +  +   C    + ++ L   Y    +   A   F +M 
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTAT--CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMA 316

Query: 221 DYGFLP--IIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLG 277
               LP  I  +C   +    ++ R++ A    + M+    I P+V T ++V+  + +  
Sbjct: 317 TKSCLPDRITYTC--LVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITF 336
               A E  + M +    P+  TY++LI G C  G +  AM+  KN++ K  ++P+V TF
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR-VEPSVGTF 433

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N++I   C+ G + EA ++   M A  + P +VTY TL+ G+ + G  E+   L+E M +
Sbjct: 434 NSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRK 493

Query: 397 NGIK-------VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
              K       V    ++ALI GLCK  +  KA  +V++L      P      A++ G  
Sbjct: 494 KAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLL 553

Query: 450 VRKNSERAFQLYKSMIRSG 468
               +E A +L  S+ + G
Sbjct: 554 RAGRTEEAGKLINSISKVG 572



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 38/182 (20%)

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P VVT+  +I+G+ +    +   + +E+M R  +  +  TYN ++ GLCK   T KA  
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKM-REFVAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 425 LVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           ++K++ D  S+ P+  TYS +I G                                   F
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVING-----------------------------------F 87

Query: 484 CQNEDFDRAAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           C+  + DRA E+L EM+ +  +APD +  + +  GL   GK + A ++ R+M+++G+ P 
Sbjct: 88  CKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPD 147

Query: 543 GF 544
            F
Sbjct: 148 KF 149


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 161/352 (45%), Gaps = 9/352 (2%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L       +K     D F +M   G +    +CN  L+ L      +      ++M    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNME--------SMGFIPSVTTYNTLISGHCN 310
           I PNV T  ++++  CK   ++ A+EV + M         S+   P V  YNTLI G C 
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 311 KGLLSLAMKFKNLME-KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            G     +     M  + G  P+ IT+N LI GFCK G++ +   +F EM    V+PNVV
Sbjct: 396 VGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV 455

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T NTL+ G  + G      + + E  R G+K D +TY ALI   C     +KA  L  ++
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K+   P+A  Y  LI+G         A  +   + + G RP+   +  L+  FC+   F
Sbjct: 516 LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKF 575

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            R  E+L EM E  + PD+I  + L +     G  + A K+ RKM   G++P
Sbjct: 576 HRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVP 627



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 162/318 (50%), Gaps = 2/318 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVE 284
           P +   N  +  L    R    LG  + MR  +  +P+  T N ++  FCK G IE+  E
Sbjct: 381 PDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKE 440

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +F  M   G  P+V T NTL+ G C  G +S A+ F    ++ G++ + +T+  LI  FC
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
                 +A  +F+EM  +  SP+ + Y TLI+G+ Q G     + +  E+ + GI+ D +
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YN LI G C+  K  +   ++K++++  L P+  TY+ LI       + + A ++ + M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGK 523
           I++G  P    +  +++ +C N + + A E+  +M     + P+++I + L + L    K
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 524 DELAMKLFRKMEIRGLLP 541
            + A+ L   M+I G+ P
Sbjct: 681 VKSAVSLMEDMKIWGVTP 698



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 160/355 (45%), Gaps = 1/355 (0%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           + S + C    + ++ L   +    +     + F +M   G  P + + N  +  +  + 
Sbjct: 409 MRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTG 468

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           RV  A+ F+ E +R  +  +  T   +++AFC +   E+A+E+F  M   G  P    Y 
Sbjct: 469 RVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYY 528

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TLISG    G ++ A      ++K GI+P+ + +NTLI GFC+  K H    +  EM+  
Sbjct: 529 TLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEA 588

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ +TYNTLI    + G+ +    +  +M++ G+   + TY A+I   C  G   +A
Sbjct: 589 GLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEA 648

Query: 423 AYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
             + KD+   S V PN   Y+ LI   C     + A  L + M   G  PN   +  +  
Sbjct: 649 MEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFK 708

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
                +D ++  E +  M+E    PD I +  L   L   G+ E   K     E+
Sbjct: 709 GLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCEV 763



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 3/274 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++    + ++F+   +LF+ +L S   C    +V+  L   ++   +  +A+    +++
Sbjct: 494 ALINAFCNVNNFEKAMELFNEMLKSG--CSPDAIVYYTLISGFSQAGRMADASFVLAELK 551

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P     N  +     + +        KEM    + P+  T N ++    K G ++
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
            A +V + M   G +P+V TY  +I+ +C  G  + AM+ FK++   + + PN + +N L
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   CK  K+  A  +  +MK   V+PN  TYN +  G     + E      + M+ +  
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHAC 731

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
             D +T   L   L   G+ ++    V   + +S
Sbjct: 732 NPDYITMEILTEWLSAVGEIERLKKFVAGCEVSS 765



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 33/244 (13%)

Query: 345 KKGKLHEANRIFSEM----KATNVSPNVVTYNTLINGY-GQVGNSEMGASLYEEMLRN-- 397
           + G++ +A ++  EM      +N  PN  T + L +    +  N E+   L E+ + N  
Sbjct: 202 RSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL---LSEDEIVNLV 258

Query: 398 ------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
                 G+ +       LI  LC+  KT +   L  ++ K   V  ++  ++L+TG    
Sbjct: 259 LKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLARE 318

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM--------LEKC 503
            N  R  +L + M+    +PN   F +L++  C+    D A EVL +M        +   
Sbjct: 319 GNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVS 378

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEI-RGLLPKGFDKLRTINCAPEN----GE 558
           + PD +I + L  GL   G+ +  + L  +M   +G  P       T NC  +     GE
Sbjct: 379 VEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTI----TYNCLIDGFCKAGE 434

Query: 559 KESG 562
            E G
Sbjct: 435 IEKG 438


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 155/320 (48%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P + S N  L  L  + R        +EM      PN+ T + ++   C+ G+ ER
Sbjct: 211 FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFER 270

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
             EV   M   G  P V  Y T+I G C +  L +A    N M   G+ PNV+ +NTL+ 
Sbjct: 271 VHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLK 330

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C   +  EA  + +EM   +   + VT+N L++   Q G  +    + E+ML +G   
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TY  +I G CKEG   +A  L++ +      PN  +Y+ ++ G C  +    A +L 
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             MI+ GC PN   F  L++  C+    ++A E+L +ML    +PD I  S +  GL   
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  + A++L   M  +G+ P
Sbjct: 511 GNTDEALELLNVMVKKGMSP 530



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/354 (26%), Positives = 169/354 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C     ++  +       ++   A     +M  YG  P +   N  L  L  ++R + A 
Sbjct: 283 CAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAE 342

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G   EM       +  T N+++   C+ G+++R +EV + M   G +P V TY T+I+G 
Sbjct: 343 GLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +GL+  A+     M   G +PN +++  ++ G C   +  +A  + S+M      PN 
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT+NTLIN   + G  E    L ++ML NG   D+++Y+ +I GL K G T +A  L+  
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  + PN   YS++ +         +  Q+++++  +  R +  ++  ++S+ C+  +
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGE 582

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            DRA E L  M+     P+    + L  GL   G  + A ++  ++  +G L K
Sbjct: 583 TDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRK 636



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 145/321 (45%), Gaps = 8/321 (2%)

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y + P++ +       L    R+  AL    +M R   +P     ++ + A C+      
Sbjct: 112 YTYFPLVRA-------LCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRG 164

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLI 340
           AV V +++   G    V   N ++   C++G +  A++  ++L+   G +P+V+++N ++
Sbjct: 165 AVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVL 224

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C   +      +  EM A    PN+VT++TLI    + G  E    ++ +M  +G  
Sbjct: 225 RGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCA 284

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+  Y  +I G+CKE + + A  ++  +    L PN   Y+ L+ G C     E A  L
Sbjct: 285 PDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGL 344

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M    C  +   F +L+   CQN   DR  EVL +MLE    PD I  + + +G   
Sbjct: 345 LAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCK 404

Query: 521 CGKDELAMKLFRKMEIRGLLP 541
            G  + A+ L R M   G  P
Sbjct: 405 EGLIDEAVMLLRSMAACGCRP 425



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 170/374 (45%), Gaps = 1/374 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ + D    D   +L   +L S+  C+   + ++ + +     +++ +  D   +M  
Sbjct: 187 VLQAVCDQGPVDEAVRLLRDLLPSFG-CEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA 245

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P I + +  +  L  +   +     + +M  +  +P+V     ++   CK   +E 
Sbjct: 246 AGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M S G  P+V  YNTL+ G C+      A      M       + +TFN L+ 
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             C+ G +     +  +M      P+V+TY T+ING+ + G  +    L   M   G + 
Sbjct: 366 FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP 425

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + ++Y  ++ GLC   +   A  L+  + +    PN  T++ LI   C +   E+A +L 
Sbjct: 426 NTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 485

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           K M+ +GC P+   +  ++    +  + D A E+L  M++K M+P++II S + S L   
Sbjct: 486 KQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGE 545

Query: 522 GKDELAMKLFRKME 535
           G+    +++F  ++
Sbjct: 546 GRINKVIQMFENIQ 559



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 123/268 (45%), Gaps = 6/268 (2%)

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN +++G+C  G L+ A +    +    + PN  T+  L+   C +G++ +A  +  +M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
               +P    Y+  +    +         +  ++   G  +D+   N ++  +C +G   
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 421 KAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +A  L++DL  +    P+  +Y+A++ G C+ +       L + M+ +GC PN   F  L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+N  F+R  EV  +M E   APD  + + +  G+    + E+A  +  +M   GL
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 540 LPK--GFDKLRTINCAPENGEKESGGLS 565
            P    ++ L    C+ +  E+  G L+
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLA 346


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 180/397 (45%), Gaps = 37/397 (9%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S+  ++ G   S S D    L D +         +   ++ L  +Y  ++          
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDEL--PRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLK 207

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M + G  P + +    +  L  +  +      Y EM+R  ++ +VY  + V++A+C+ G
Sbjct: 208 EMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGG 267

Query: 278 IIERAVEVFKNMESMGFIPSVTTY-----------------------------------N 302
            + RA EVF      G  P+  TY                                   N
Sbjct: 268 NVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFN 327

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T+I G+C  G++  A++ K +MEK GI+ ++ T+NTL  G C+  ++ +A ++   M   
Sbjct: 328 TMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEK 387

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V+PN V+Y TLI+ + + G+      L+ +M   G +  ++TYN +I G  K G  ++A
Sbjct: 388 GVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREA 447

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
               K+++K  LVP+  TY+ L+ G CV    + A +L++ M   G +PN   +  L+S 
Sbjct: 448 ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
             +    + A ++  +ML   + PD  + S L   LH
Sbjct: 508 LAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLH 544



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S +  +     S  VD A G   E+ R+ +  N    N ++ ++ +    +    + K M
Sbjct: 150 SASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEM 209

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           E+ G  P+V TY  L+ G    G +S      + M++  +  +V  ++ +I  +C+ G +
Sbjct: 210 ENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNV 269

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM-LRN----------- 397
             A+ +F E     V PN  TY  LING+ ++G  E    L  +M LR            
Sbjct: 270 RRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTM 329

Query: 398 -----------------------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
                                  GI++DI TYN L  GLC+  + + A  L+  + +  +
Sbjct: 330 IDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  +Y+ LI+      +   A +L++ M   G RP+   + +++  + +N     A  
Sbjct: 390 APNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAER 449

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
              EM +K + PD    + L  G  HC  GK ++A++LF +M+ RG  P
Sbjct: 450 FKKEMEKKGLVPDIYTYAGLVHG--HCVNGKVDVALRLFEEMKHRGTKP 496



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 102/206 (49%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           ++ + ++ GFCK G + +A+ +  E+    V  N   YN+L++ Y +  N +  A L +E
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G++  + TY  L+ GL + G   K   +  ++ + ++  +   YSA+I   C   N
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             RA +++   +  G  PN+  +  L++ FC+    + A  +L +M  + +  + I+ + 
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  G    G  E A+++   ME  G+
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGI 354



 Score = 46.2 bits (108), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 9/159 (5%)

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           L+ + ++ G CK G    A  L+ +L ++ +  NA  Y++L+     ++N +    L K 
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M   G  P    + +L+    +  D  +   V  EM  K +A D    S + +     G 
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 524 DELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
              A ++F +    G+ P          GF K+  I  A
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAA 307


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 147/270 (54%), Gaps = 3/270 (1%)

Query: 241 SERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           ++RVD A     +M  +    P++   N+++H FCK G +  A E+ + + SMG +P+  
Sbjct: 152 AQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAV 211

Query: 300 TYNTLISGHCNKGLLSLAMK-FKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           TY TLI G C  G LS A++ FK L  ++   +PNV+TFN LI G CK  +L  A  +  
Sbjct: 212 TYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVK 271

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           +MKA ++  +  TY TL++G  + G +   + ++EEMLR G    ++TY  L+   CK G
Sbjct: 272 QMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAG 331

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             + A  +++ +    + P+ +TY+ L+ G         A + ++ ++R  C P   ++ 
Sbjct: 332 SLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYS 391

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            L+   C+    D A +  +EML++ +APD
Sbjct: 392 ALVRGCCKAALVDEAVKYYVEMLDRRLAPD 421



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 95/384 (24%), Positives = 177/384 (46%), Gaps = 11/384 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-R 220
           +L  +  + + D    +F  I      C  S +  ++L   +   +    A + F +M +
Sbjct: 44  LLASLCQAGTMDQAMAIFRGI-----QCSPSVITLNILINGFCELQLLDKALELFHEMEK 98

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++  +P   +    +      +R+D A    +E   +  S +V  +  V   FCK   ++
Sbjct: 99  NFALVPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVD 156

Query: 281 RAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            A ++  +M E     P +  +N +I G C  G +  A +    +   G  PN +T+ TL
Sbjct: 157 EAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTL 216

Query: 340 IFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           I GFCK G L EA ++F  + + +    PNVVT+N LI+G  +    E    L ++M   
Sbjct: 217 IDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKAR 276

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            ++ D  TY  L+ GLCK+G+T + + + +++ +    P+  TY+ L+   C   + + A
Sbjct: 277 DLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDA 336

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            Q+ +SM+  G  P+   + +L+    +N     A E   ++L +   P +++ S L  G
Sbjct: 337 QQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRG 396

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
                  + A+K + +M  R L P
Sbjct: 397 CCKAALVDEAVKYYVEMLDRRLAP 420



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 157/312 (50%), Gaps = 9/312 (2%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++ L  + R+  A+  Y +M      PN+  +N+++ + C+ G +++A+ +F+ ++   
Sbjct: 9   LIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQCS- 67

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEA 352
             PSV T N LI+G C   LL  A++  + MEKN  + P   T+  +I  +CK  +L +A
Sbjct: 68  --PSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQA 125

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML-RNGIKVDILTYNALIL 411
            ++  E  ++  S +V+   ++  G+ +    +    L  +M+ +   K DI+ +N +I 
Sbjct: 126 RQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIH 183

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--C 469
           G CK G+ ++A  +++ L     VPNA TY+ LI G C   N   A QL+K +       
Sbjct: 184 GFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHA 243

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            PN   F  L+S  C+ +  + A E++ +M  + +  D+   + L  GL   G+     +
Sbjct: 244 EPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSR 303

Query: 530 LFRKMEIRGLLP 541
           +F +M   G  P
Sbjct: 304 VFEEMLREGCNP 315



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 5/298 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S+ RG   +   D   +L   ++   +      + ++++   +    + R A +    + 
Sbjct: 144 SVARGFCKAQRVDEAYQLLLDMV-EKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLV 202

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM--RRNRISPNVYTLNMVMHAFCKLGI 278
             G +P   +    +     S  +  AL  +K +  R +   PNV T N ++   CK   
Sbjct: 203 SMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADR 262

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A E+ K M++        TY TL+ G C +G  S   +    M + G  P+V+T+ T
Sbjct: 263 LEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTT 322

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+   CK G L +A ++   M A  + P+V TY  L+ G  + G        +E++LR  
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 399 IKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
                + Y+AL+ G CK     +A  Y V+ LD+  L P+ +T   L+   C R  ++
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRR-LAPDPATCKLLVEMLCKRGRTD 439



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 40/286 (13%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+  T++ LI+G C  G L  A++  N M +    PN+   N L+   C+ G + +A  I
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV-------------- 401
           F   +    SP+V+T N LING+ ++   +    L+ EM +N   V              
Sbjct: 61  F---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 402 --------------------DILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNAST 440
                               D++   ++  G CK  +  +A  L+ D+ +K S  P+   
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV--LLE 498
           ++ +I G C       A+++ ++++  GC PN   +  L+  FC++ +   A ++  +L 
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLS 237

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +    P+ +  + L SGL    + E A +L ++M+ R L    F
Sbjct: 238 SRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTF 283



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 114/239 (47%), Gaps = 16/239 (6%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN  TF+ LI G CK G+L EA   +++M   +  PN+   N L+    Q G  +   ++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 391 YEEMLRNGIKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITG 447
           +      GI+    ++T N LI G C+     KA  L  +++KN +LVP A+TY+A+I  
Sbjct: 61  F-----RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKC 115

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-P 506
            C     ++A QL +    S C  +      +   FC+ +  D A ++LL+M+EK  A P
Sbjct: 116 YCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKP 173

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGLS 565
           D +  + +  G    G+   A ++   +   G +P        I     +G  +SG LS
Sbjct: 174 DIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLI-----DGFCKSGNLS 227


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 199/424 (46%), Gaps = 24/424 (5%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L+  +  L P  V  V+ K QK+   +L FF W     P+     +HS + ++       
Sbjct: 105 LSQFAPFLNPXLVIQVI-KSQKNPYHALFFFNWASNPNPNPNNY-SHSHLCYV------- 155

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
               +I   ++    F   S L  S    +R+ D +   F    K Y  R   R A   F
Sbjct: 156 ----AITDLLISHGLFSTASSLLQS---HHRLSDFAAAKF---VKAYGDRGDIRGAIHWF 205

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCK 275
            + +       + S N  L   + + R+ +A   + ++ +   + P+V T   ++  +CK
Sbjct: 206 HRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCK 265

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM-EKNGIQPNVI 334
           +G+IE A  VF   + MG  P++ TYNT+I+G C KGL+  AMK  + M E     P+ +
Sbjct: 266 MGMIENAKNVF---DEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTV 322

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ TLI G+CK+G+L EA +   EM + N  PNV+TYN +I G    GN +    +   M
Sbjct: 323 TYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRM 382

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
             NG+K ++ T+ +++ GLC  GK   AA  +K++    +  +A  Y  ++   C    +
Sbjct: 383 RLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKA 442

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A  L K M   G  P+   F  +     ++   D+A  +L +M +    P+ +  S +
Sbjct: 443 DDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTV 502

Query: 515 YSGL 518
             GL
Sbjct: 503 IDGL 506



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 163/311 (52%), Gaps = 5/311 (1%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           KF+ +  D   +  A+ ++   ++      +++ N ++  F K   I  A  VF  +   
Sbjct: 187 KFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKE 246

Query: 293 GFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           G + P V+TY T+I G+C  G++  A   KN+ ++ G +PN++T+NT+I GFCKKG +  
Sbjct: 247 GVVKPDVSTYTTIIRGYCKMGMIENA---KNVFDEMGCKPNLVTYNTMINGFCKKGLMES 303

Query: 352 ANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           A +I  +M  T +  P+ VTY TLI+GY + G  E      EEM+    + ++LTYNA+I
Sbjct: 304 AMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAII 363

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLC  G   +A  ++  +  N L  N +T+++++ G CV    + A +  K M+  G  
Sbjct: 364 YGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGME 423

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
            +   + ++++ +C+    D A  +L EM  + + P     + ++  L   GK + A  +
Sbjct: 424 ADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLI 483

Query: 531 FRKMEIRGLLP 541
            R+M+  G  P
Sbjct: 484 LRQMKQLGCTP 494



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 84/175 (48%), Gaps = 2/175 (1%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           + D A+   KEM+   I+P+V + N V     + G  ++A  + + M+ +G  P+  +Y+
Sbjct: 441 KADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYS 500

Query: 303 TLISGHCN-KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           T+I G C  KG +    +F + M +NG   +   ++ L+ G+C+ G    A R+F EM  
Sbjct: 501 TVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLD 560

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI-LGLCK 415
                N+ ++   + G      +      +EEM R    +DI  Y  ++   LCK
Sbjct: 561 MGYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCK 615


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 3/348 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
             +L   + H+     A   F  +   GF P   + N  +  L     +   L F+ ++ 
Sbjct: 96  LSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVV 155

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  +   +++  CK G  +    + + +E     P V  YNT+I+  C   LL 
Sbjct: 156 AQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 215

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M   GI P+V+T+ TLI GFC  GK+ EA  + +EMK  N++P+V T++ LI
Sbjct: 216 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLI 275

Query: 376 NGYGQVGNSEM---GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +  G+ G  +M     SL+EEM    +  DI+TYN+LI GLCK    ++A  L+K++ ++
Sbjct: 276 DALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEH 335

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + P+  +Y+ L+ G C     E A + ++ ++  GC  N   + ++++  C+   F  A
Sbjct: 336 GIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEA 395

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            ++  +M  K   P++I    +   L    +++ A K+ R+M  RGLL
Sbjct: 396 MDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLL 443



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 174/360 (48%), Gaps = 39/360 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LSSL+ ++R    +  +K+   N I+P++ TL+++++ FC    I  A  VF N+  
Sbjct: 62  NNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILK 121

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL---------------------------- 323
            GF P   T NTLI G C +G +   + F +                             
Sbjct: 122 RGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKA 181

Query: 324 -------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                  +E + ++P+V+ +NT+I   CK   L +A  ++SEM    +SP+VVTY TLI+
Sbjct: 182 VARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIH 241

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK---KAAYLVKDLDKNS 433
           G+  +G  +   SL  EM    I  D+ T++ LI  L KEGK K   +A  L +++   +
Sbjct: 242 GFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKN 301

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++P+  TY++LI G C   + ERA  L K M   G +P+ + + +L+   C+    + A 
Sbjct: 302 MIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAK 361

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           E    +L K    +    + + +GL   G    AM L  KME +G +P      RTI CA
Sbjct: 362 EFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAI-TFRTIICA 420



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 151/333 (45%), Gaps = 44/333 (13%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R  P  +  N ++ +  K       + +FK  E  G  P + T + LI+
Sbjct: 42  AVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 101

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIF------------------------ 341
             C++  ++LA   F N++ K G  P+ IT NTLI                         
Sbjct: 102 CFCHQAHITLAFSVFANIL-KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 342 -----------GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS- 389
                      G CK G+     R+  +++  +V P+VV YNT+IN   +  N  +G + 
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCK--NKLLGDAC 218

Query: 390 -LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG- 447
            +Y EM+  GI  D++TY  LI G C  GK K+A  L+ ++   ++ P+  T+S LI   
Sbjct: 219 DVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278

Query: 448 --QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
             +  +K  + A  L++ M      P+   +  L+   C+N   +RA  +L EM E  + 
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           PD    + L  GL   G+ E+A + F+ + ++G
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKG 371



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 118/245 (48%), Gaps = 3/245 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    K   +A D + +M   G  P + +    +       ++  A     E
Sbjct: 199 VMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNE 258

Query: 254 MRRNRISPNVYTLNMVMHAFCKLG---IIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           M+   I+P+VYT ++++ A  K G   +++ A+ +F+ M+    IP + TYN+LI G C 
Sbjct: 259 MKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCK 318

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              L  A+     M+++GIQP+V ++  L+ G CK G+L  A   F  +       NV  
Sbjct: 319 NHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWP 378

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN +ING  + G       L  +M   G   + +T+  +I  L ++ +  KA  +++++ 
Sbjct: 379 YNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMI 438

Query: 431 KNSLV 435
              L+
Sbjct: 439 ARGLL 443



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 110/239 (46%)

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           NLM      P    FN ++    K  +      +F + +   ++P++ T + LIN +   
Sbjct: 47  NLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQ 106

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            +  +  S++  +L+ G   D +T N LI GLC  G+ KK  Y    +       +  +Y
Sbjct: 107 AHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSY 166

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
             LI G C    ++   +L + +     +P+  ++  ++++ C+N+    A +V  EM+ 
Sbjct: 167 GTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIV 226

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           K ++PD +  + L  G    GK + A  L  +M+++ + P  +     I+   + G+K+
Sbjct: 227 KGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 194/409 (47%), Gaps = 22/409 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           +++ +L  L K  ++  +E ++R ++       P    D + YS             L  
Sbjct: 47  SYNGLLEGLCKLERWHEAEELVRDMISRGGRSTP----DMVTYST------------LLS 90

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K   + +   ++   G  P      K ++SL  S R+  AL   +EM R    P
Sbjct: 91  GYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCP 150

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
            + T N ++   C+   +E A  + + M + G    V TYNTL+ G C  G L  A +  
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M+ +G  P+V+ +++ ++G CK GK+ +A+++  +M+ ++  PNVVTYNT+++G  + 
Sbjct: 211 ERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKS 270

Query: 382 GNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           G  +    + E+M   +G  ++++ Y+ ++ GLCK G+T++A  +++ + +    P+  T
Sbjct: 271 GKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           YS+L+ G C     E A +  + M   GC+PN   +  L+   C       A  ++ EM 
Sbjct: 331 YSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMS 390

Query: 501 EKCMA-----PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                     P     + L  GL   G+ + A+K F++M  +G  P G 
Sbjct: 391 SGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 168/356 (47%), Gaps = 3/356 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + F+ L   ++ + +  +       M      P + S N  L  L   ER   A 
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 249 GFYKEM--RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
              ++M  R  R +P++ T + ++  +CK G +E + E+ K + S G  P    Y  +++
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C    L  A++    M + G  P +ITFNTLI G C++  L  A+ +  +M A+ V  
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VVTYNTL++G  + G  +    L E M  +G   D++ Y++ + GLCK GK   A  ++
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQ 485
           + +  +   PN  TY+ ++ G C     + A ++ + M  S GC  N   +  ++   C+
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 A  V+  M      PD +  S L +GL   GK E A++  R+M + G  P
Sbjct: 306 LGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKP 361



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 155/307 (50%), Gaps = 6/307 (1%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P + + N  +S     + +++A    ++M  + +  +V T N +M   CK G ++ A
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEA 206

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++ + M++ G  P V  Y++ + G C  G +  A +    M  +   PNV+T+NT++ G
Sbjct: 207 EQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDG 266

Query: 343 FCKKGKLHEANRIFSEMKATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            CK GK+  A  +  +M +++    NVV Y+T+++G  ++G ++   S+ E M R G + 
Sbjct: 267 LCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D++TY++L+ GLCK GK ++A   V+++      PNA TY +L+ G C       A ++ 
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386

Query: 462 KSMIRSG-----CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           + M   G     C P+   +  L+   C+    D A +    M  +   PD +  S +  
Sbjct: 387 EEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE 446

Query: 517 GLHHCGK 523
           GL   G+
Sbjct: 447 GLARSGR 453



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 172/382 (45%), Gaps = 25/382 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGI----LDSDSFDLPSKLFDSILYSYRM--------- 188
           T+S +L    K  K + S  +L+ +    L  D+  + +K+  S+  S R+         
Sbjct: 84  TYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL-MYTKVVASLCKSARLGEALELLEE 142

Query: 189 -----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                C  + + F+ L       K    A     +M   G    + + N  +  L  + R
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGR 202

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +  A    + M+ +  +P+V   +  ++  CK G +  A +V + M      P+V TYNT
Sbjct: 203 LQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNT 262

Query: 304 LISGHCNKGLLSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           ++ G C  G +  A++  + +   +G   NV+ ++T++ G CK G+  EA  +   M   
Sbjct: 263 ILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARA 322

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P+VVTY++L+NG  + G  E       EM   G K + +TY +L+ GLC  G+  +A
Sbjct: 323 GCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEA 382

Query: 423 AYLVKDLDKNSLV-----PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
             +V+++           P+ STY+ALI G C     + A + ++ M   GC P+   + 
Sbjct: 383 ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYS 442

Query: 478 MLMSTFCQNEDFDRAAEVLLEM 499
            ++    ++    +A  +L E+
Sbjct: 443 TIVEGLARSGRALQAEMILSEV 464



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 124/248 (50%), Gaps = 2/248 (0%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+  G  P+  T+N L++G   +G      +    M    IQPNV+++N L+ G CK  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 349 LHEANRIFSEM--KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            HEA  +  +M  +    +P++VTY+TL++GY + G  E    L +E++  G++ D L Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             ++  LCK  +  +A  L++++ +    P   T++ LI+G C  KN E A  L + M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SG + +   +  LM   C+      A ++L  M     APD +  S    GL   GK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 527 AMKLFRKM 534
           A ++  +M
Sbjct: 241 AHQVLEQM 248



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 147/330 (44%), Gaps = 46/330 (13%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R    PN  T N +++ F K G       + + M +    P+V +YN L+ G C    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 314 LSLAMKF-KNLMEKNGIQ-PNVITFNTLIFGFCKKGKLHEANRIFSE------------- 358
              A +  ++++ + G   P+++T++TL+ G+CK GK+ E+  +  E             
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 359 ----------------------MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
                                 M      P ++T+NTLI+G  +  N EM  SL ++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           +G+K D++TYN L+ GLCK G+ ++A  L++ +  +   P+   YS+ + G C       
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL----- 511
           A Q+ + M  S   PN   +  ++   C++   D A    LEM+E+  + D   L     
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEMMEQMASSDGCGLNVVGY 296

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S +  GL   G+ + A  +   M   G  P
Sbjct: 297 STVVDGLCKLGRTQEARSVMEAMARAGCRP 326



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 118/282 (41%), Gaps = 44/282 (15%)

Query: 84  IAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETH 143
           +AYS  ++   K    L  H        VL +++  +            H P+ +T  T 
Sbjct: 223 VAYSSFVYGLCKSGKVLDAH-------QVLEQMRDSH------------HDPNVVTYNT- 262

Query: 144 SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTY 203
             +L  L K+ K  ++  ++  +  SD   L     + + YS         V D L K  
Sbjct: 263 --ILDGLCKSGKIDTALEMMEQMASSDGCGL-----NVVGYST--------VVDGLCKL- 306

Query: 204 AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNV 263
               + + A      M   G  P + + +  ++ L  + +++ A+   +EM      PN 
Sbjct: 307 ---GRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNA 363

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-----PSVTTYNTLISGHCNKGLLSLAM 318
            T   ++H  C  G +  A  + + M S G       PSV+TYN LI G C  G +  A+
Sbjct: 364 VTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDAL 423

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           KF   M   G  P+ ++++T++ G  + G+  +A  I SE++
Sbjct: 424 KFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/327 (29%), Positives = 166/327 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     S +   A+G  K+MR + + PNV T + +M+
Sbjct: 228 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 287

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P + TY TL+ GHC +G +  + K  +LM + G++P
Sbjct: 288 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKP 347

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           ++IT+NTLI G C  GK+ EA ++ + M +  V P++VTY TLINGY +V   +   +L+
Sbjct: 348 DIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALF 407

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM+ +G+  +I+TYN ++ GL    +T  A  L   + K+      STY+ ++ G C  
Sbjct: 408 KEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKN 467

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
             ++ A ++++++  +  +     F +++    +    D A ++        + PD    
Sbjct: 468 NLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTY 527

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRG 538
           S +   L   G  E    LF  ME  G
Sbjct: 528 SLMAENLIEQGSLEELDDLFLSMEENG 554



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           L ++ +D A+     M +N + P+  T N ++H +C  G  + A+   K M S G  P+V
Sbjct: 220 LTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNV 279

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY++L++  C  G  + A K  + M K G++P++ T+ TL+ G CK+G++ E+ ++F  
Sbjct: 280 VTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDL 339

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    V P+++TYNTLI+G    G  +    L   M+  G+K DI+TY  LI G C+  +
Sbjct: 340 MVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSR 399

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A  L K++  + + PN  TY+ ++ G    + +  A +LY S+ +SG +     + +
Sbjct: 400 MDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNI 459

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++   C+N   D A  +   +    +  ++   + +   L  CG+ + A  LF      G
Sbjct: 460 ILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANG 519

Query: 539 LLPKGFDKLRTINCAPEN 556
           L+P     +RT +   EN
Sbjct: 520 LVP----DVRTYSLMAEN 533



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/291 (24%), Positives = 130/291 (44%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M   G  P I +    L       RV  +   +  M R  + P++ T N ++ 
Sbjct: 298 ARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLID 357

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G ++ A ++  +M S+G  P + TY TLI+G+C    +  A+     M  +G+ P
Sbjct: 358 GCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSP 417

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+IT+N ++ G     +   A  ++  +  +     + TYN +++G  +   ++    ++
Sbjct: 418 NIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMF 477

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           + +    ++++  T+N +I  L K G+  +A  L      N LVP+  TYS +      +
Sbjct: 478 QNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 537

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            + E    L+ SM  +GC  +  +   ++    Q  D  RA   L  + EK
Sbjct: 538 GSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 588



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 144/342 (42%), Gaps = 52/342 (15%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P+V TY  LI 
Sbjct: 43  FDELLRRGR-GASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G + + ITF  L+ G C   +  +A              
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVG-NSEM 386
                           NR         + ++ +     P+VV+YNT++NG+ + G  +++
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKL 220

Query: 387 GASLYEE-------MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            A   ++       M++NG+  D +TYN+++ G C  G+ K+A   +K +  + + PN  
Sbjct: 221 TAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVV 280

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TYS+L+   C    S  A +++ SM + G  P+   +  L+   C+      + ++   M
Sbjct: 281 TYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLM 340

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   + PD I  + L  G    GK + A KL   M   G+ P
Sbjct: 341 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKP 382



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 109/239 (45%), Gaps = 2/239 (0%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   AT     M   G  P I +    ++      R+D AL  +KEM  + +SPN+ T N
Sbjct: 364 KMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYN 423

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEK 326
           +++           A E++ ++   G    ++TYN ++ G C   L   A++ F+NL   
Sbjct: 424 IILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLT 483

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           + +Q    TFN +I    K G++ EA  +F+   A  + P+V TY+ +     + G+ E 
Sbjct: 484 D-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 542

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
              L+  M  NG   D    N+++  L + G   +A   +  +D+      AST S L+
Sbjct: 543 LDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 601



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 79/190 (41%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   Y    +  +A   F +M   G  P I + N  L  L  + R   A   Y  
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + ++     + T N+++H  CK  + + A+ +F+N+          T+N +I      G 
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A         NG+ P+V T++ +     ++G L E + +F  M+    S +    N+
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 564

Query: 374 LINGYGQVGN 383
           ++    Q G+
Sbjct: 565 IVRKLLQRGD 574


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 175/411 (42%), Gaps = 58/411 (14%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL------LDSE 242
           C  SP +F+ L   Y        A     +M   G  P     N  + S+      L   
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCH 427

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            +++A   Y EM    +  N   ++      C  G  E+A  V + M   GFIP  +TY+
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++   CN   + LA      M++ G+  +V T+  ++  FCK G + +A + F+EM+  
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
             +PNVVTY  LI+ Y +         L+E ML  G   +I+TY+ALI G CK G+ +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKA 607

Query: 423 AYLV------KDL-----------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
             +       KD+           D NS  PN   Y AL+ G C     E A +L  +M 
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMS 667

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAE------------------------------- 494
             GC PN+ +++ L+   C+    D A E                               
Sbjct: 668 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQD 727

Query: 495 ----VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               VL +MLE   AP+ +I +E+  GL   GK + A KL + ME +G  P
Sbjct: 728 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 778



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/459 (22%), Positives = 190/459 (41%), Gaps = 62/459 (13%)

Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           + FF W         T   ++ ++ ++ ++   K  E +L+ I D D      ++F   L
Sbjct: 149 ISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDK-----EVFGEFL 203

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        ++L + Y     F  A +   +++D+ F P   + N  + + L ++ 
Sbjct: 204 -------------NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADC 250

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   ++EM    +  + +TL    ++ CK+G    A+ +   ME+  F+P    Y  
Sbjct: 251 LDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTK 307

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LISG C   L   AM F N M      PNV+T++TL+ G   K +L    R+ + M    
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367

Query: 364 VSPNVVTYNTLINGYGQVGNS--------------------------------------- 384
             P+   +N+L++ Y   G+                                        
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCH 427

Query: 385 --EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
             E+    Y EML  G+ ++ +  ++    LC  GK +KA  +++++     +P+ STYS
Sbjct: 428 LLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            ++   C     E AF L++ M R G   + + + +++ +FC+    ++A +   EM E 
Sbjct: 488 KVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              P+ +  + L        K   A +LF  M   G LP
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 158/348 (45%), Gaps = 7/348 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G       +   KL D++  S   C+ + +V+D L        K   A +   +M 
Sbjct: 645 ALLDGFCKLHRVEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           ++GF   + + +  +      +R D+A     +M  N  +PNV     ++   CK+G  +
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++ + ME  G  P+V TY  +I G    G +   ++    M   G+ PN +T+  LI
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI 822

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G L  A+ +  EMK T+   +   Y  +I G+ +     +G  L +E+ ++   
Sbjct: 823 DHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLG--LLDEIGQDDTA 880

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAF 458
             +  Y  L+  L K  + + A  L++++   S  LV  +STY++LI   C+    ++AF
Sbjct: 881 PFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAF 940

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           +L+  M + G  P    F  L+    +N     A  +LL+ +   + P
Sbjct: 941 RLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEAL-LLLDFISHMVCP 987



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 20/359 (5%)

Query: 187 RMCDSSPLV-FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           RMC S  +   D+ FK Y      R     +  + D GF  +               RV+
Sbjct: 613 RMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLD-GFCKL--------------HRVE 657

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A      M      PN    + ++   CK+G ++ A EV   M   GF  ++ TY++LI
Sbjct: 658 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             +       LA K  + M +N   PNV+ +  +I G CK GK  EA ++   M+     
Sbjct: 718 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 777

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PNVVTY  +I+G+G++G  E    L E M   G+  + +TY  LI   CK G    A  L
Sbjct: 778 PNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 837

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++++ +     +A+ Y  +I G    K    +  L   + +    P   ++ +L+    +
Sbjct: 838 LEEMKQTHWPTHAAGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIK 895

Query: 486 NEDFDRAAEVLLEM--LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +  + A  +L E+      +   S   + L   L    K + A +LF +M  +G++P+
Sbjct: 896 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPE 954



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 177/449 (39%), Gaps = 124/449 (27%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K+  A     +M   GF+P   + +K L  L ++ ++++A   ++EM+R  +  +VYT  
Sbjct: 463 KYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522

Query: 268 MVMHAFCKLGIIERAV-----------------------------------EVFKNMESM 292
           +++ +FCK G+IE+A                                    E+F+ M S 
Sbjct: 523 IMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLA-----------------MKFK-------------- 321
           G +P++ TY+ LI GHC  G +  A                 M FK              
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVI 642

Query: 322 ---------------------NLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------- 352
                                + M   G +PN I ++ LI G CK GKL EA        
Sbjct: 643 YGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMS 702

Query: 353 ---------------------------NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
                                      +++ S+M   + +PNVV Y  +I+G  +VG ++
Sbjct: 703 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 762

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L + M   G + +++TY A+I G  + GK +    L++ +    + PN  TY  LI
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLI 822

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C     + A  L + M ++    +   +  ++  F  N++F  +  +L E+ +   A
Sbjct: 823 DHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTA 880

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKM 534
           P   +   L   L    + E+A++L  ++
Sbjct: 881 PFLSLYRLLVDNLIKAQRLEMALRLLEEV 909


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 178/347 (51%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    K   +A + + QM      P + + +  +       +++ A G ++E
Sbjct: 209 VMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+P+ YT N+++ A CK G ++ A  +   M   G +P+V TY++L+ G+C    
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    N + + G  PN  ++ T+I GFCK   + EA  +F++M+   ++P+ VTYN+
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G  + G       L +EM  NG   +I TYN LI  LCK     +A  LVK +    
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+  T++ LI G C     + A  +++ ++  G   N   + ++++  C+   FD A 
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +L +M +  + PD++    L   L H  ++E A KL R+M  R ++
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVV 555



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 161/312 (51%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + SL   + V  A   Y +M   +ISP+V T + +++ FC +G +E A  +F+ M  
Sbjct: 212 NTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVL 271

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               P   T+N L+   C +G L  A     +M K G+ PNV+T+++L+ G+C   ++++
Sbjct: 272 KNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNK 331

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  + + +     +PN  +Y T+ING+ ++   +   SL+ +M   GI  D +TYN+LI 
Sbjct: 332 AKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLID 391

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK G+   A  LV ++  N    N  TY+ LI   C   + ++A  L K +   G +P
Sbjct: 392 GLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQP 451

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           + + F +L+   C+      A +V  ++L K  + ++   + + +GL   G  + A  L 
Sbjct: 452 DMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALL 511

Query: 532 RKMEIRGLLPKG 543
            KM+  G++P  
Sbjct: 512 SKMDDNGIIPDA 523



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 167/344 (48%), Gaps = 37/344 (10%)

Query: 232 NKFLSSLLDSE--RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           NK L SL+ S       A+   + +  + I+P+++T N++++ +C +  +  A  +   +
Sbjct: 70  NKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFSMMAKI 129

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN--------------------------- 322
             MG+ P   T+NTLI G C  G +  A+ F +                           
Sbjct: 130 LKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGET 189

Query: 323 ------LMEKNG--IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
                 L + +G  ++ NV+ +NT+I   CK   + +A  ++S+M A  +SP+VVT++ L
Sbjct: 190 RTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSAL 249

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+  VG  E    L+ EM+   I  D  T+N L+  LCKEG  K A  ++  + K  +
Sbjct: 250 IYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGV 309

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +PN  TYS+L+ G C+     +A  +  ++ + G  PN H +  +++ FC+ +  D A  
Sbjct: 310 MPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALS 369

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  +M  K +APD +  + L  GL   G+   A +L  +M   G
Sbjct: 370 LFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 170/349 (48%), Gaps = 6/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L   Y H  +   A     ++   G+ P   + N  +  L  + +V  AL F+  + 
Sbjct: 106 FNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 + ++   +++  CK+G    A+++ + ++      +V  YNT+I   C   L+ 
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M    I P+V+TF+ LI+GFC  G+L EA  +F EM   N++P+  T+N L+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   + GN +   ++   M++ G+  +++TY++L+ G C   +  KA +++  + +    
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PNA +Y  +I G C  K  + A  L+  M   G  P+K  +  L+   C++     A E+
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 496 LLEMLEKCMAPDSIILSELYSGL---HHCGKDELAMKLFRKMEIRGLLP 541
           + EM +     +    + L   L   HH  +   A+ L +K++ +G+ P
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQ---AIALVKKIKDQGIQP 451



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 140/287 (48%), Gaps = 5/287 (1%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG--IIERAVEVFKNME 290
           +F+ S +D   VD  +  +  + R + + ++   N ++ +  K        A+ + + +E
Sbjct: 39  QFVPSNID---VDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLE 95

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             G  P + T+N LI+ +C+   ++ A      + K G +P+ ITFNTLI G C  GK+ 
Sbjct: 96  FHGITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVK 155

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA      + A     +  +Y TLING  ++G +     +  ++    +K++++ YN +I
Sbjct: 156 EALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTII 215

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             LCK      A  L   +    + P+  T+SALI G C+    E AF L++ M+     
Sbjct: 216 DSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNIN 275

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           P+ + F +L+   C+  +   A  +L+ M+++ + P+ +  S L  G
Sbjct: 276 PDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDG 322


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 133/494 (26%), Positives = 221/494 (44%), Gaps = 62/494 (12%)

Query: 110 KHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE------- 160
           KHV  +LK QKD + +L  F  V+       T  T+  ++  L  + +F + E       
Sbjct: 8   KHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR 67

Query: 161 -----SILRGILDSD--SFDLPSKLFDSILYSYRM----CDSSPLVFDLLFKTYAHRKKF 209
                S+L G+  S   ++    K+ +++    RM    C+ S   ++ +         F
Sbjct: 68  LNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYF 127

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL--------------------- 248
             A   + +M+  G  P + +    + S   ++R   AL                     
Sbjct: 128 NQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTV 187

Query: 249 --GFYKE------------MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
             GFY+E            M R  I P++ T N +MH  CK G ++   ++   +   G 
Sbjct: 188 ISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGV 247

Query: 295 IPSVTTYNTLISGHCNKGLL----SLAMKFKNLMEK---NGIQPNVITFNTLIFGFCKKG 347
            P++ T+N  I G C KG+L    S  ++ +N + K    G++P+  T+NT+I+G+ K G
Sbjct: 248 CPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVG 307

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K+ +A+RI  + K     P+  TY +LI G  Q G+ +   +L+EE L  G+K  I+ YN
Sbjct: 308 KIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYN 367

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI GL ++G   KA  L+ D+ K  + P+  TY+ +I G C       A  L  + I  
Sbjct: 368 TLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK 427

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P+   F  L+  +C+    D A  +L  M    + PD I  + + +GL    K E  
Sbjct: 428 GYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDV 487

Query: 528 MKLFRKMEIRGLLP 541
           M+ F+ +  +G LP
Sbjct: 488 METFKMIMEKGCLP 501



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 159/305 (52%), Gaps = 1/305 (0%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           C K +    +S+ V+ A  +  +M    + P+ +T N +++ + K+G I+ A  + K+ +
Sbjct: 262 CRKGVLEGANSKVVE-AENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAK 320

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
             GF+P   TY +LI G C  G +  A+         G++P+++ +NTLI G  ++G + 
Sbjct: 321 FKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVL 380

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           +A ++ ++M    +SP++ TYN +ING  ++G      +L    +  G   DI T+N LI
Sbjct: 381 KALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLI 440

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            G CK  K   A  ++  +  + + P+  TY++++ G C     E   + +K ++  GC 
Sbjct: 441 DGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCL 500

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           PN   + +L+ + C+      A ++L E+  + + PD +    + SG  + G  + A +L
Sbjct: 501 PNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQL 560

Query: 531 FRKME 535
           FR+ME
Sbjct: 561 FRRME 565



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/400 (23%), Positives = 181/400 (45%), Gaps = 23/400 (5%)

Query: 179 FDSILYSY----RMCDSSPLVFDLLFKTYA--------------HRKKFRNATDTFCQMR 220
           +++I+Y Y    ++ D+S ++ D  FK +                     +A   F +  
Sbjct: 296 YNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEAL 355

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I   N  +  L     V  AL    +M +  +SP+++T N+V++  CK+G + 
Sbjct: 356 GKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVS 415

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +     + G++P + T+NTLI G+C +  +  A+   + M  +G+ P+VIT+N+++
Sbjct: 416 DANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSIL 475

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK  K  +    F  +      PN++TYN LI    +         L EE+   G+ 
Sbjct: 476 NGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLI 535

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQ 459
            D +++  +I G C  G   +A  L + +++   +    +TY+ +I     + + + A +
Sbjct: 536 PDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQK 595

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L+  M   GC P+ + + +++  FC+  + +   + LL+ +E    P       + + L 
Sbjct: 596 LFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLC 655

Query: 520 HCGKDELAMKLFRKMEIRGLLPKG----FDKLRTINCAPE 555
              +   A+ +   M   G++P+     FD  +    AP+
Sbjct: 656 VQHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPK 695



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 98/227 (43%), Gaps = 3/227 (1%)

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV--TYNTLING 377
           F ++ +++G +   +T+  +I      G+     R+  EM+  NV  +++   Y + +  
Sbjct: 27  FNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMR-LNVDNSLLEGVYVSAMRN 85

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           YG+ G  +    ++E M     +  I +YNA++  L + G   +A  +   +    + P+
Sbjct: 86  YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPD 145

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             T++  I   C  K    A +L  +M   GC  N  ++  ++S F +      A E+  
Sbjct: 146 VCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFN 205

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +ML   + P     ++L   L   G  +   KL  K+   G+ P  F
Sbjct: 206 KMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLF 252


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 236/533 (44%), Gaps = 78/533 (14%)

Query: 84  IAYSHLIHSDWKKLTA-LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH---KPSSLT 139
           I+ S L  +  ++ TA LS++ TP ++   L + Q D   +L   +W       +P+S  
Sbjct: 31  ISNSTLSFASTQQHTATLSSNFTPAQLLDTLRR-QNDETAALRLLSWASKQPNFRPNSSI 89

Query: 140 LETHSIVLHILTKNRKFKSSESIL-----------RGIL----DSDS-FDLPSKLF---- 179
            E    +L  L K   F S + IL           RG+L    DS + F+L  ++     
Sbjct: 90  YEE---ILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVE 146

Query: 180 ----------DSILYSYRM---CDSSPL--------------------VFDLLFKTYAHR 206
                     D++LY++ +    D + L                     F++L K     
Sbjct: 147 VMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKA 206

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            + R A     +M  YG +P  ++    +   ++   +D A    ++M          T+
Sbjct: 207 HQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTV 266

Query: 267 NMVMHAFCKLGIIERA----------------VEVFKNMESMGFIPSVTTYNTLISGHCN 310
           N+++H FCK G IE A                +E++  M++ G  P   TYN LI   C 
Sbjct: 267 NVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCY 326

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G L  A+     ME +G   NVIT+NTLI GFCK  K+ EA  IF +M+   +S N VT
Sbjct: 327 RGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVT 386

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YNTLI+G  +    +  A L ++M+  G+K D  TYN+++   C+EG  +KAA +V+ + 
Sbjct: 387 YNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMT 446

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            N   P+  TY  LI G C     E A +L +S+   G     H +  ++    + +   
Sbjct: 447 SNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTK 506

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD-ELAMKLFRKMEIRGLLPK 542
            A  +  EM EK   PD+     ++ GL + G     A+    +M  +G LP+
Sbjct: 507 EAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPE 559



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 5/264 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      +++L  +  +R K + A     +M   G    + + N  +     +++++ A 
Sbjct: 310 CQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAE 369

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M    +S N  T N ++   CK   ++ A ++   M   G  P   TYN++++  
Sbjct: 370 EIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYF 429

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS--EMKATNVSP 366
           C +G +  A      M  NG +P+++T+ TLI G CK G++  A+R+    ++K   ++P
Sbjct: 430 CREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTP 489

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK-TKKAAYL 425
           +   YN +I    +   ++    L+ EM   G   D  TY  +  GL   G    +A   
Sbjct: 490 H--AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDF 547

Query: 426 VKDLDKNSLVPNASTYSALITGQC 449
           V ++ +   +P  S++  L  G C
Sbjct: 548 VIEMIEKGFLPEFSSFYMLAEGLC 571



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 5/123 (4%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG-IIERAVEVFKNME 290
           N  + +L   +R   A+  ++EM     +P+ +T  +V       G  I  AV+    M 
Sbjct: 493 NPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMI 552

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL-MEKNGIQPNVITFNTLIFGFCKKGKL 349
             GF+P  +++  L  G C+  +    +K  +L MEK     N +    +I GF K  K 
Sbjct: 553 EKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEV---VMIRGFLKIRKF 609

Query: 350 HEA 352
            +A
Sbjct: 610 QDA 612


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 205/430 (47%), Gaps = 28/430 (6%)

Query: 151 TKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFDLLFKTYAHR 206
            +N +   +E  LR +++   F+     ++SI+  Y     + D++ ++ D +FK +   
Sbjct: 271 VRNSRVVEAEEYLRKMVNG-GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPD 329

Query: 207 K-KFRNATDTFCQMRD-------------YGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           +  + +  + FC+  D              G  P I   N  +  L     +  AL    
Sbjct: 330 EFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMN 389

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM  N   PN++T N+V++  CK+G +  A  +  +  + G  P + TYNTLI G+C + 
Sbjct: 390 EMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQL 449

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A +  N M   G+ P+VIT+NTL+ G CK GK  E   IF  M+    +PN++TYN
Sbjct: 450 KLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYN 509

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            +++   +         L  EM   G+K D++++  L  G CK G    A  L + ++K 
Sbjct: 510 IIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQ 569

Query: 433 -SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             +    +TY+ +++    + N   A +L+  M  SGC P+ + + +++  FC+  +  +
Sbjct: 570 YDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQ 629

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKG----FD 545
             + LLE +EK   P       + + L  C KD++  A+ +   M  +G++P+     F+
Sbjct: 630 GYKFLLENMEKRFIPSLTTFGRVLNCL--CVKDKVHEAVGIIHLMLQKGIVPETVNTIFE 687

Query: 546 KLRTINCAPE 555
             + +  AP+
Sbjct: 688 ADKKVVAAPK 697



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/404 (27%), Positives = 185/404 (45%), Gaps = 18/404 (4%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH 205
           ++H+L K      SE +L  +L      +   LF   ++   +C    L           
Sbjct: 222 LVHVLCKKGLVFESERLLGKVLKRG---VCPNLFTFNIFVQGLCREGAL------DRAVR 272

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
             +   A +   +M + GF P   + N  +        V  A    K+       P+ +T
Sbjct: 273 NSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFT 332

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
              +++ FCK G  +RA+ VFK+    G  PS+  YNTLI G   +GL+  A++  N M 
Sbjct: 333 YCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMA 392

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +NG  PN+ T+N +I G CK G + +A+ +  +  A    P++ TYNTLI+GY +    +
Sbjct: 393 ENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLD 452

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               +   M   G+  D++TYN L+ GLCK GK+++   + K +++    PN  TY+ ++
Sbjct: 453 SATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIV 512

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK--- 502
              C  K    A  L   M   G +P+   F  L + FC+  D D A ++   M ++   
Sbjct: 513 DSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDV 572

Query: 503 --CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
               A  +II+S     L+      +AMKLF  M+  G  P  +
Sbjct: 573 CHTTATYNIIVSAFSEQLNM----NMAMKLFSVMKNSGCDPDNY 612



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 199/446 (44%), Gaps = 28/446 (6%)

Query: 110 KHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL 167
           KHV  ++K+Q D + +LE F   ++      T  T+  ++  L  + +F+  E +L  + 
Sbjct: 8   KHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR 67

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           ++ +  L    +   +                 K Y  + K + A DTF +M  Y   P 
Sbjct: 68  ENVNNALLEGAYIEAM-----------------KNYGRKGKVQEAVDTFERMDFYNCDPS 110

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + S N  ++ L++    + A   Y  MR   +  +VYT  + + +FCK      A+ + +
Sbjct: 111 VHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLR 170

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
           NM  +G   +   Y T+++G  + G    A +  + M    + P+V+ FN L+   CKKG
Sbjct: 171 NMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKG 230

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG-------NSEM--GASLYEEMLRNG 398
            + E+ R+  ++    V PN+ T+N  + G  + G       NS +        +M+  G
Sbjct: 231 LVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGG 290

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            + D LTYN++I G CK+G  + A  ++KD       P+  TY +LI G C   + +RA 
Sbjct: 291 FEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAM 350

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            ++K  +  G RP+  ++  L+    Q      A +++ EM E    P+    + + +GL
Sbjct: 351 AVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGL 410

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G    A  L      +G  P  F
Sbjct: 411 CKMGCVSDASHLVDDAIAKGCPPDIF 436



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 8/282 (2%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P I + N  +       ++D A      M    ++P+V T N +++  CK G  E  
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +E+FK ME  G  P++ TYN ++   C    ++ A+     M+  G++P+V++F TL  G
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549

Query: 343 FCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           FCK G +  A ++F  M K  +V     TYN +++ + +  N  M   L+  M  +G   
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609

Query: 402 DILTYNALILGLCKEGK-TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           D  TY  +I G CK G  T+   +L+++++K   +P+ +T+  ++   CV+     A  +
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKR-FIPSLTTFGRVLNCLCVKDKVHEAVGI 668

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
              M++ G  P     E + + F  ++    A ++L+E L K
Sbjct: 669 IHLMLQKGIVP-----ETVNTIFEADKKVVAAPKILVEDLLK 705



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 21/185 (11%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           F  LF  +        A   F +M + Y       + N  +S+  +   +++A+  +  M
Sbjct: 543 FGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVM 602

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVE-VFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           + +   P+ YT  +V+  FCK+G I +  + + +NME   FIPS+TT+  +++  C K  
Sbjct: 603 KNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR-FIPSLTTFGRVLNCLCVKDK 661

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+   +LM + GI P  +                  N IF   K    +P ++  + 
Sbjct: 662 VHEAVGIIHLMLQKGIVPETV------------------NTIFEADKKVVAAPKILVEDL 703

Query: 374 LINGY 378
           L  G+
Sbjct: 704 LKKGH 708


>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
 gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/381 (27%), Positives = 189/381 (49%), Gaps = 38/381 (9%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
            + K + A   F  + + G  P + S    L++L   +R D       ++  N ++P+  
Sbjct: 25  EKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSI 84

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             N V++AF + G +E A+E F  M+  G  P+ +TYNTLI G+   G    ++K   LM
Sbjct: 85  FFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELM 144

Query: 325 EKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
            + G ++PN+ T+N L+  +C K ++ EA  +  +M A+ + P+VVTYNT+   Y Q G 
Sbjct: 145 SQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGA 204

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA---AYLVKDLDK-------NS 433
            +    +  EM  NG++ +  T   ++ G CKEG+ ++A   AY +K+L         NS
Sbjct: 205 LDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNS 264

Query: 434 LV-------------------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+                         P+  T+S ++         E+  +++  M+++G
Sbjct: 265 LIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAG 324

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+ H + +L   + + ++ ++A E+L  M++    P+ +I + + SG    GK + A+
Sbjct: 325 IEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAV 384

Query: 529 KLFRKMEIRGLLP--KGFDKL 547
           ++F KM  RG+ P  K F+ L
Sbjct: 385 RVFDKMCQRGISPNLKTFETL 405



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 105/409 (25%), Positives = 195/409 (47%), Gaps = 25/409 (6%)

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
           HKPS   L +++ +L  LT  ++F S  SI+  + + +  + P  +F             
Sbjct: 44  HKPS---LISYTTLLAALTMQKRFDSIYSIISQV-EENGMN-PDSIF------------- 85

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
              F+ +   ++      +A +TF +M++ G  P   + N  +     + + + ++   +
Sbjct: 86  ---FNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLE 142

Query: 253 EM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            M +   + PN+ T N+++ A+C    I  A  V   M + G  P V TYNT+ + +  K
Sbjct: 143 LMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQK 202

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A      M+ NG+QPN  T   ++ G+CK+G++ EA R    MK   + PN+V +
Sbjct: 203 GALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIF 262

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI G+  + + +    +   M   G+K D++T++ ++      G  +K   +  D+ K
Sbjct: 263 NSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVK 322

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + P+A  YS L  G    +  E+A +L  +MI+SG +PN  IF  ++S +C     D 
Sbjct: 323 AGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDY 382

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHC---GKDELAMKLFRKMEIR 537
           A  V  +M ++ ++P+      L  G        K E  +++  + E++
Sbjct: 383 AVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQ 431



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 132/278 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L + + ++K+   A +   +M   G  P + + N   ++      +D A G   EM+
Sbjct: 157 YNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQ 216

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N + PN  T  ++M  +CK G I  A+     M+ +G  P++  +N+LI G        
Sbjct: 217 NNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRD 276

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +  NLME+ G++P+VITF+T++  +   G + +   IF +M    + P+   Y+ L 
Sbjct: 277 GVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILA 336

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY +    E    L   M+++G + +++ +  +I G C  GK   A  +   + +  + 
Sbjct: 337 KGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGIS 396

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           PN  T+  LI G    +   +A ++ + M     +P K
Sbjct: 397 PNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEK 434



 Score = 48.5 bits (114), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 8/200 (4%)

Query: 161 SILRG---ILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S+++G   I+D D  D    L +             + F  +   ++         + F 
Sbjct: 264 SLIKGFVAIMDRDGVDEVLNLMEEF-----GVKPDVITFSTIMNAWSTAGFMEKCREIFD 318

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P   + +      + ++  + A      M ++   PNV     V+  +C  G
Sbjct: 319 DMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAG 378

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ AV VF  M   G  P++ T+ TLI G         A +   +M +  +QP   T  
Sbjct: 379 KMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTML 438

Query: 338 TLIFGFCKKGKLHEANRIFS 357
            +   +   G   EANR+  
Sbjct: 439 LVAEAWRATGMTKEANRLLG 458


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 161/341 (47%), Gaps = 37/341 (10%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +L  + ++D A     EM R ++ P+V+T N+V+   CK   I RA+E F+ M    
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE-- 98

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P V TYNTL+ G C  G ++ A      ME  GI P+ +T+ TLI  FCK  +   A 
Sbjct: 99  --PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +   M +   SP V +Y ++ING  +    +    L+EEM   G K D +TYN LI GL
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C + +  +A  L+  + +N   P+  T++ALI G C     + AF L++ M + GC P+ 
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 474 HIFEMLMSTFC---------------------------------QNEDFDRAAEVLLEML 500
               +L+S  C                                 +   FDRAA +L +M 
Sbjct: 277 VTHTVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMA 336

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + + P+ +  +  + GL    +   A + FR+M  +G+ P
Sbjct: 337 RRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEP 377



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 186/470 (39%), Gaps = 94/470 (20%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + +L +L + R+ +    + R I   D                  C  + L +  L K
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQD------------------CKPNALSYCYLVK 43

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K   A  T  +M     +P + + N  + +L  + R+  A+ F++ M      P
Sbjct: 44  ALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EP 99

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK-------GLL 314
           +V T N ++   CK G + +A  +F +ME  G  PS  TY TLI   C         GLL
Sbjct: 100 DVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLL 159

Query: 315 SL----------------------------AMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
            L                            A +    M+  G +P+ +T+NTLI G C K
Sbjct: 160 QLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVK 219

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            +LHEA  + + M      P+ +T+  LI G       +    L++ M + G   D++T+
Sbjct: 220 QRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTH 279

Query: 407 NALILGLCKEGKTK---------------------------------KAAYLVKDLDKNS 433
             L+  LC   K +                                 +AA L++ + +  
Sbjct: 280 TVLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRG 339

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+A   G    K   RA++ ++ M+  G  P+   + +L+  FC+ +  D A 
Sbjct: 340 VPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAE 399

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           +++  M +  + P+ +  + L    HHC  GK E   +L   M  RG  P
Sbjct: 400 KMVRYMDQSGLPPNIVTYNTLVG--HHCRKGKVEAIGELLHTMVSRGRQP 447



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 152/367 (41%), Gaps = 33/367 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L        +   A   F  M   G  P   +    +       + + A G  + 
Sbjct: 102 VTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQL 161

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M   + SP VY+   +++  CK   +++A ++F+ M+  G  P   TYNTLI G C K  
Sbjct: 162 MASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQR 221

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A     +M +NG QP+ ITF  LI G C   ++ EA  +F  M     +P++VT+  
Sbjct: 222 LHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTV 281

Query: 374 LINGY---------------------------------GQVGNSEMGASLYEEMLRNGIK 400
           L++                                   G+    +  A L ++M R G+ 
Sbjct: 282 LVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVP 341

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +++TY A   GL    +  +A    + + +  + P+   Y+ L+ G C     + A ++
Sbjct: 342 PNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKM 401

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            + M +SG  PN   +  L+   C+    +   E+L  M+ +   PD    S L +GL  
Sbjct: 402 VRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFM 461

Query: 521 CGKDELA 527
            G+ + A
Sbjct: 462 VGQADAA 468



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/308 (20%), Positives = 134/308 (43%), Gaps = 4/308 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G+  +   D   +LF+ +  +   C    + ++ L      +++   A D    M 
Sbjct: 176 SIINGLCKNRKVDQAYQLFEEMKLA--GCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMV 233

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + GF P   +    +  L  ++R+  A   ++ M +   +P++ T  +++   C L  + 
Sbjct: 234 ENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLR 293

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ V +N  +     +V  Y  +      +     A +    M + G+ PNV+T+    
Sbjct: 294 PALSVVRNYPACP--EAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFF 351

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G     +   A R F  M    + P++V YN L++G+ +    +M   +   M ++G+ 
Sbjct: 352 KGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLP 411

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            +I+TYN L+   C++GK +    L+  +      P+ +T+S L+ G  +   ++ A+  
Sbjct: 412 PNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSF 471

Query: 461 YKSMIRSG 468
               +  G
Sbjct: 472 LNLAMSQG 479



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 31/204 (15%)

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VT N L++   +   SE    ++  +     K + L+Y  L+  LC+ GK  KA   + +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQ----------------------------- 459
           + +  LVP+  TY+ +I   C  +   RA +                             
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVTYNTLLGGLCKNGRVAQA 120

Query: 460 --LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L+ SM  +G  P+   +  L+  FC+   F+ A  +L  M  +  +P       + +G
Sbjct: 121 CSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIING 180

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L    K + A +LF +M++ G  P
Sbjct: 181 LCKNRKVDQAYQLFEEMKLAGCKP 204


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 206/471 (43%), Gaps = 77/471 (16%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF-DSILYSYRMCDSS 192
           +P    L++ ++  H L   R   ++ +IL   L    F  P + F +  + +Y+   S 
Sbjct: 142 RPHPHLLQSFAVAAH-LAAVRDPGAARAILVRAL---RFPSPHRHFVEQFISTYKAFSSD 197

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK------------------- 233
           P+ FDLL            +     ++R YG  P  ESCN                    
Sbjct: 198 PVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPE 250

Query: 234 --------FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--------- 276
                    L +L  + R+  A   + EM      P+V T  +++H +C L         
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 277 --------------------------GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
                                     G +  AV V ++M   G +     + T++SG C 
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L+ A  + + M+K G+  + +T+  LI G C+ G+L EA R+  EM+   +  + VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI+GY +VG       ++ +M++  +  +++TY AL  GLCK+G    A  L+ ++ 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L  N  TY++LI G C   N E+A +    M  +G +P+ + +  ++   CQ+++ D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA  +L EML+K + P  +  + L +G    G+ E   +L   M  + + P
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 154/321 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + ++   Y    +   A     +M   G      +    ++ L D  +V  A+   ++
Sbjct: 286 VTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVED 345

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  + +  +      VM  FC+ G +  A   F  M+  G      TY  LI+G C  G 
Sbjct: 346 MVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A +    ME  G+  + +T+  LI G+CK GK+ EA  + ++M    V+PNVVTY  
Sbjct: 406 LKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTA 465

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L +G  + G+      L  EM   G++++I TYN+LI GLCK G  ++A   + D+D+  
Sbjct: 466 LSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAG 525

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY+ +I   C  K  +RA  L + M+  G +P    + +LM+ FC +   +   
Sbjct: 526 LKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGK 585

Query: 494 EVLLEMLEKCMAPDSIILSEL 514
            +L  MLEK + P++   + L
Sbjct: 586 RLLEWMLEKNIHPNTTTYNSL 606



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF  +   +  +     A + F +M+  G      +    ++ L  +  +  A    +EM
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +  +  T  +++  +CK+G +  A  V   M      P+V TY  L  G C +G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  + M   G++ N+ T+N+LI G CK G L +A R   +M    + P+V TY T+
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I    Q    +   SL +EML  GIK  I+TYN L+ G C  G+ +    L++ + + ++
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN +TY++L+   C+ KN +   ++YK M+     PN++ + +L+   C+  +   A  
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              EM+EK     +   + L   L+   K   A +LF KM
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 121/275 (44%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + + +L   Y    K   A     +M      P + +       L     V  A  
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM    +  N++T N +++  CK G +E+A+    +M+  G  P V TY T+I   C
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A      M   GI+P ++T+N L+ GFC  G++    R+   M   N+ PN  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN+L+  Y    N +    +Y+ ML   +  +  TYN LI G CK    K+A Y   ++
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            +      AS+Y+ALI     +K    A +L++ M
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 109/234 (46%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  +  ++ A+    +M    + P+VYT   ++ A C+   ++RA  + + M  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ TYN L++G C  G +    +    M +  I PN  T+N+L+  +C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              I+  M +  V PN  TYN LI G+ +  N +     + EM+  G ++   +YNALI 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            L K+ K  +A  L + + K+ L      Y+  I       N E    L   ++
Sbjct: 679 LLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 15/236 (6%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E  +R ++D D   L   ++        +C S               K+   A     +M
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS---------------KELDRAHSLLQEM 556

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D G  P I + N  ++    S RV+      + M    I PN  T N +M  +C    +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +   E++K M S   +P+  TYN LI GHC    +  A+ F + M + G +    ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           I    KK K  EA R+F +M+   ++     YN  I+      N E   +L +E++
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 2/203 (0%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A  T   M + G  P + +    + +L  S+ +D A    +EM    I P + T N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKN 327
           +M+ FC  G +E    + + M      P+ TTYN+L+  +C  K + S    +K ++ + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PN  T+N LI G CK   + EA    SEM          +YN LI    +       
Sbjct: 631 -VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 388 ASLYEEMLRNGIKVDILTYNALI 410
             L+E+M ++ +  +   YN  I
Sbjct: 690 RRLFEKMRKDRLTAEPDVYNFYI 712



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           +YN L+  LC  G+ K A  L    D+ +  P+  TY  ++ G C     E A +L   M
Sbjct: 255 SYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   N   +  +++  C       A  V+ +M+   +  D+ + + + SG    G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             A   F +M+ RGL   G      IN     GE
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 183/384 (47%), Gaps = 2/384 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG+           + D +L   R C    + + +L +    R  ++ A     +MR
Sbjct: 161 TLIRGLCGRGRTGNALVVLDDMLR--RGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I + N  ++ +    RVD A+ F K +  +   PN  + N+V+   C     E
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++   M   G+ P+V T+N LIS  C +GL+  AM+  + + K G  PN +++N ++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK+ K+  A      M +    P++V+YNTL+    + G  +    L  ++   G  
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             +++YN +I GL K GKTK+A  L+ ++    L P+  TYS + +G C     E A + 
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRA 458

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  +   G RPN  ++  ++   C+  +   A ++ + M+     P+    + L  GL +
Sbjct: 459 FCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTY 518

Query: 521 CGKDELAMKLFRKMEIRGLLPKGF 544
            G  + A +L  ++  RG++ KG 
Sbjct: 519 EGLVKEARELLGELCSRGVVSKGL 542



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 165/334 (49%), Gaps = 2/334 (0%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           KL D +    + C    + ++++        +  +A +    +  +G  P   S N  L 
Sbjct: 212 KLLDEM--RAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            L  +ER + A     EM +    PNV T NM++   C+ G++E A+EV   +   G  P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  +YN ++   C +  +  AM F  LM   G  P+++++NTL+   C+ G++  A  + 
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            ++K    +P +++YNT+I+G  + G ++    L  EM+  G++ DI+TY+ +  GLC+E
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            + ++A      +    + PN   Y+A++ G C R+ +  A  L+  MI +GC PN+  +
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTY 509

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +L+           A E+L E+  + +    +I
Sbjct: 510 TILIEGLTYEGLVKEARELLGELCSRGVVSKGLI 543



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 3/316 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  ++    + ++D A     +M    + P+ YT N ++   C  G    A+ V
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
             +M   G +P V TY  L+   C +     AMK  + M   G  P++IT+N ++ G C+
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G++ +A      + +    PN V+YN ++ G       E    L  EM + G   +++T
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +N LI  LC+ G  + A  ++  + K    PN+ +Y+ ++   C +K  +RA    + M+
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             GC P+   +  L++  C+  + D A E+L ++ +K   P  I  + +  GL   GK +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 526 LAMKLFRKMEIRGLLP 541
            A++L  +M  +GL P
Sbjct: 419 EALELLNEMVTKGLQP 434



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 4/348 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L +    R +  NA      M   G +P + +    L +         A+    EMR
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +P++ T N+V++  C+ G ++ A+E  K++ S G  P+  +YN ++ G C      
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K    M + G  PNV+TFN LI   C++G +  A  +  ++     +PN ++YN ++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPIL 338

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           + + +    +   +  E M+  G   DI++YN L+  LC+ G+   A  L+  L      
Sbjct: 339 HAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 398

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   +Y+ +I G      ++ A +L   M+  G +P+   +  + S  C+ +  + A   
Sbjct: 399 PVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRA 458

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
             ++ +  + P++++ + +  GL  C + E   A+ LF  M   G +P
Sbjct: 459 FCKVQDMGIRPNTVLYNAILLGL--CKRRETHNAIDLFIYMISNGCMP 504



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 8/281 (2%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+    N  +    + G +E A+ + ++M  +    +      LI   C  G  + A + 
Sbjct: 57  PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV 116

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
               E     P+V+ +N ++ G+C  G+L  A R+ ++M    + P+  TYNTLI G   
Sbjct: 117 LAACE-----PDVMAYNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCG 168

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G +     + ++MLR G   D++TY  L+   CK    K+A  L+ ++      P+  T
Sbjct: 169 RGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIIT 228

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ ++ G C     + A +  KS+   GC PN   + +++   C  E ++ A +++ EM 
Sbjct: 229 YNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 288

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +K   P+ +  + L S L   G  E AM++  ++   G  P
Sbjct: 289 QKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 164/350 (46%), Gaps = 9/350 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L  T   R + R+A      M   G  P + + N  L +         A+     MR
Sbjct: 10  YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMR 69

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               +PN  T N++M   C  G ++ A+E+ +N+ S G  PS   YNT++ G C+     
Sbjct: 70  AEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWG 129

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M +    PN  TFN +I+  C+KG L +A ++  +M     + N+VTYN +I
Sbjct: 130 DADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAII 189

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  +  N +    L  +M   G K DI+TYN L+ GLC   +   A  L+ ++ +N  +
Sbjct: 190 NGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCL 249

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI   C +     A +++K M   GC PN   +  ++S   +    D+A E+
Sbjct: 250 PDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKD----ELAMKLFRKMEIRGLLP 541
             EM  K   PD I     Y  L  C  D    E A++  RK++  G+ P
Sbjct: 310 FNEMGHKGFNPDKI-----YQLLAECLNDDDTIEEAIQTVRKLQDSGISP 354



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 137/283 (48%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN YT N ++H  C+ G +  A+ V  +M   G  P V TYN L+   C       AM
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +  +LM   G  PN +T+N L+ G C +G + +A  +   + +    P+ V YNT++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
                      L  EMLR     +  T+N +I  LC++G  ++A  L++ + K+    N 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+A+I G C ++N + A  L   M   GC+P+   +  L+   C    +  A E++  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M +    PD++  + L   L   G    A+++F++M  +G  P
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTP 285



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 159/325 (48%), Gaps = 1/325 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  S + ++ + K     +++ +A +   +M      P   + N  + SL     +  A+
Sbjct: 108 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 167

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              ++M ++  + N+ T N +++  C+   ++ A+ +   M+S G  P + TYNTL+ G 
Sbjct: 168 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 227

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+      A +  + M +NG  P+ +TFNTLI   C+KG + +A  +F +M     +PN 
Sbjct: 228 CSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNS 287

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TY+T+I+G  +    +    L+ EM   G   D + Y  L   L  +   ++A   V+ 
Sbjct: 288 ITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRK 346

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L  + + P+   Y+A++ G C    +E A  +   M+ SGC P+   + +L+        
Sbjct: 347 LQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGY 406

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSE 513
            + A E+L+++  + +  +S+I SE
Sbjct: 407 LNEARELLIKLCSRDVLVNSLIKSE 431



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 5/208 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L+G+  +  +    +L D++  +   C    + F+ L      +    +A + F QM 
Sbjct: 222 TLLKGLCSAARWVDAEELMDNM--TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 279

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN-VYTLNMVMHAFCKLGII 279
           D G  P   + +  +S L  + ++D AL  + EM     +P+ +Y L  +         I
Sbjct: 280 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKIYQL--LAECLNDDDTI 337

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A++  + ++  G  P    YN ++ G C  G    A+     M  +G  P+ +T+  L
Sbjct: 338 EEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 397

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPN 367
           I G   +G L+EA  +  ++ + +V  N
Sbjct: 398 IEGLAYEGYLNEARELLIKLCSRDVLVN 425


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 206/471 (43%), Gaps = 77/471 (16%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF-DSILYSYRMCDSS 192
           +P    L++ ++  H L   R   ++ +IL   L    F  P + F +  + +Y+   S 
Sbjct: 142 RPHPHLLQSFAVAAH-LAAVRDPGAARAILVRAL---RFPSPHRHFVEQFISTYKAFSSD 197

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK------------------- 233
           P+ FDLL            +     ++R YG  P  ESCN                    
Sbjct: 198 PVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPE 250

Query: 234 --------FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--------- 276
                    L +L  + R+  A   + EM      P+V T  +++H +C L         
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 277 --------------------------GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
                                     G +  AV V ++M   G +     + T++SG C 
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L+ A  + + M+K G+  + +T+  LI G C+ G+L EA R+  EM+   +  + VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI+GY +VG       ++ +M++  +  +++TY AL  GLCK+G    A  L+ ++ 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L  N  TY++LI G C   N E+A +    M  +G +P+ + +  ++   CQ+++ D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA  +L EML+K + P  +  + L +G    G+ E   +L   M  + + P
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 143/280 (51%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           ++ L D  +V  A+   ++M  + +  +      VM  FC+ G +  A   F  M+  G 
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
                TY  LI+G C  G L  A +    ME  G+  + +T+  LI G+CK GK+ EA  
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           + ++M    V+PNVVTY  L +G  + G+      L  EM   G++++I TYN+LI GLC
Sbjct: 447 VHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLC 506

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G  ++A   + D+D+  L P+  TY+ +I   C  K  +RA  L + M+  G +P   
Sbjct: 507 KAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIV 566

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            + +LM+ FC +   +    +L  MLEK + P++   + L
Sbjct: 567 TYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF  +   +  +     A + F +M+  G      +    ++ L  +  +  A    +EM
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +  +  T  +++  +CK+G +  A  V   M      P+V TY  L  G C +G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  + M   G++ N+ T+N+LI G CK G L +A R   +M    + P+V TY T+
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I    Q    +   SL +EML  GIK  I+TYN L+ G C  G+ +    L++ + + ++
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN +TY++L+   C+ KN +   ++YK M+     PN++ + +L+   C+  +   A  
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              EM+EK     +   + L   L+   K   A +LF KM
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/392 (23%), Positives = 160/392 (40%), Gaps = 30/392 (7%)

Query: 75  KGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHK 134
           +GQ  D V +    ++H         +T ++ F  K  L   +           W    +
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAAR----------NWFDEMQ 382

Query: 135 PSSLTLE--THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
              L  +  T++ +++ L +  + K +E +L+ + D                  +  D  
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMED------------------KGLDVD 424

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
            + + +L   Y    K   A     +M      P + +       L     V  A     
Sbjct: 425 AVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLH 484

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM    +  N++T N +++  CK G +E+A+    +M+  G  P V TY T+I   C   
Sbjct: 485 EMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSK 544

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            L  A      M   GI+P ++T+N L+ GFC  G++    R+   M   N+ PN  TYN
Sbjct: 545 ELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYN 604

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           +L+  Y    N +    +Y+ ML   +  +  TYN LI G CK    K+A Y   ++ + 
Sbjct: 605 SLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEK 664

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
                AS+Y+ALI     +K    A +L++ M
Sbjct: 665 GFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 108/234 (46%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  +  ++ A+    +M    + P+VYT   ++ A C+   ++RA  + + M  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ TYN L++G C  G +    +    M +  I PN  T+N+L+  +C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              I+  M +  V PN  TYN LI G+ +  N +     + EM+  G ++   +YNALI 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            L K+ K  +A  L + + K  L      Y+  I       N E    L   ++
Sbjct: 679 LLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 15/236 (6%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E  +R ++D D   L   ++        +C S               K+   A     +M
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS---------------KELDRAHSLLQEM 556

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D G  P I + N  ++    S RV+      + M    I PN  T N +M  +C    +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +   E++K M S   +P+  TYN LI GHC    +  A+ F + M + G +    ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           I    KK K  EA R+F +M+   ++     YN  I+      N E   +L +E++
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 2/203 (0%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A  T   M + G  P + +    + +L  S+ +D A    +EM    I P + T N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKN 327
           +M+ FC  G +E    + + M      P+ TTYN+L+  +C  K + S    +K ++ + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PN  T+N LI G CK   + EA    SEM          +YN LI    +       
Sbjct: 631 -VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 388 ASLYEEMLRNGIKVDILTYNALI 410
             L+E+M +  +  +   YN  I
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYI 712



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           +YN L+  LC  G+ K A  L    D+ +  P+  TY  ++ G C     E A +L   M
Sbjct: 255 SYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   N   +  +++  C       A  V+ +M+   +  D+ + + + SG    G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             A   F +M+ RGL   G      IN     GE
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 156/296 (52%), Gaps = 1/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL    +M+   +SP+  T N +++A C+ G++  A  +   M+  G +P+  TYNTL+S
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVS 287

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN-VS 365
            +   G +  A      M   G +P++ T+N L  G C+ GK+ EA ++  EM+    VS
Sbjct: 288 AYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVS 347

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+VVTYNTL++   +   S    +L EEM   G+K  ++T+N ++ GLC+EG+ ++A   
Sbjct: 348 PDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGR 407

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++ + +  L P+  TY+ LI   C   N  +AF L   M+RSG + +      L+   C+
Sbjct: 408 LEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCK 467

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + ++ A E+L    ++   PD +    + +      K E A+ L+ +M  R L P
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTP 523



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/414 (26%), Positives = 184/414 (44%), Gaps = 71/414 (17%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+LL  T+  +    +A  T  +M+ +G  P   + N  L++      +  A      M+
Sbjct: 212 FNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMK 271

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  I P   T N ++ A+ +LG I++A +V + M + GF P + TYN L +G C  G + 
Sbjct: 272 KEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 331

Query: 316 LAMKFKNLMEKNGI-QPNVITFNTLIF--------------------------------- 341
            A K K+ ME+ GI  P+V+T+NTL+                                  
Sbjct: 332 EAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNII 391

Query: 342 --GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
             G C++G+L EA      M    ++P+V+TYNTLI+   + GN      L +EM+R+G+
Sbjct: 392 VKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGL 451

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVK-------------------------------- 427
           K+D  T N L+  LCKE + ++A  L++                                
Sbjct: 452 KMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALC 511

Query: 428 ---DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
              ++ K  L P+ STY+ LI G         A      ++  G  P+   + +++  +C
Sbjct: 512 LWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYC 571

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +  D ++A +   +M+E    PD +  + L +GL   G+ E AMKLF     +G
Sbjct: 572 KEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 1/328 (0%)

Query: 218 QMRDYGFL-PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           +M   G + P + + N  + +    +R   AL   +EMR   +  ++ T N+++   C+ 
Sbjct: 339 EMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCRE 398

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G +E A+   + M   G  P V TYNTLI   C  G ++ A    + M ++G++ +  T 
Sbjct: 399 GQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTL 458

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTL++  CK+ +  EA  +          P+ V+Y T++  Y +    E    L++EM++
Sbjct: 459 NTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIK 518

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
             +   I TYN LI GL   GK  +A   + +L +  LVP+ +TY+ +I   C   + E+
Sbjct: 519 RKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEK 578

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           AFQ +  M+ +  +P+      LM+  C     ++A ++    +EK    D I  + L  
Sbjct: 579 AFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQ 638

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            L      + A++ F  ME+RGL P  F
Sbjct: 639 ALCKDNDVDTALRFFADMEVRGLQPDVF 666



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 150/323 (46%), Gaps = 17/323 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMR--------------RNRISPNVYTLNMVMHAFCKLGII 279
            L+S   S   D AL  Y  +R              R  + P++   N V+ A  +    
Sbjct: 129 LLASFPTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPST 188

Query: 280 --ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + +++ F ++ ++   P+  T+N L+  HC+KG L+ A+   + M+  G+ P+ +T+N
Sbjct: 189 SPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYN 248

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL+   C+KG L EA  + + MK   + P   TYNTL++ Y ++G  +    + E M   
Sbjct: 249 TLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAF 308

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSER 456
           G + D+ TYN L  GLC+ GK  +A  L  ++++  +V P+  TY+ L+      + S  
Sbjct: 309 GFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L + M   G + +     +++   C+    + A   L  M E+ + PD I  + L  
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 517 GLHHCGKDELAMKLFRKMEIRGL 539
                G    A  L  +M   GL
Sbjct: 429 ASCKAGNVAKAFVLMDEMVRSGL 451



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            K++  A +        GF+P   S    +++     + + AL  + EM + +++P++ T
Sbjct: 468 EKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSIST 527

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N ++     +G +  A++    +  MG +P  TTYN +I  +C +G L  A +F N M 
Sbjct: 528 YNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMV 587

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           +N  +P+V+T NTL+ G C  G+L +A ++F          +V+TYNTLI    +  + +
Sbjct: 588 ENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVD 647

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                + +M   G++ D+ TYN L+  L + G++ +A  ++  L+++  +     Y ++ 
Sbjct: 648 TALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIK 707

Query: 446 TG-QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           +  + V    +   +     + +    ++  +   +   C       A  VL EM++K M
Sbjct: 708 SSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGM 767

Query: 505 APDSIILSELYSGL 518
           + D+     L  GL
Sbjct: 768 SVDNSTYITLMEGL 781



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/295 (25%), Positives = 138/295 (46%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS +  +++ K      +   A      M + G  P + + N  + +   +  V  A   
Sbjct: 383 SSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVL 442

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             EM R+ +  + +TLN +++  CK    E A E+ +     GF+P   +Y T+++ +  
Sbjct: 443 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFK 502

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +     A+   + M K  + P++ T+NTLI G    GKL EA    +E+    + P+  T
Sbjct: 503 EYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN +I+ Y + G+ E     + +M+ N  K D++T N L+ GLC  G+ +KA  L +   
Sbjct: 563 YNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWV 622

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +     +  TY+ LI   C   + + A + +  M   G +P+   + +L+S   +
Sbjct: 623 EKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSE 677



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 160/361 (44%), Gaps = 62/361 (17%)

Query: 136 SSLTLETHSI--VLHILTKNRKFKSSESILRGILDSDSFDLPSKLF--DSILYSYRMCDS 191
           S L ++T ++  +L+ L K ++++ +E +LR          P + F  D + Y       
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP--------PQRGFVPDEVSYG------ 494

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
              V    FK Y    K   A   + +M      P I + N  +  L    ++  A+   
Sbjct: 495 --TVMAAYFKEY----KPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKL 548

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            E+    + P+  T N+++HA+CK G +E+A +    M    F P V T NTL++G C  
Sbjct: 549 NELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLY 608

Query: 312 GLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           G L  AMK F++ +EK G + +VIT+NTLI   CK   +  A R F++M+   + P+V T
Sbjct: 609 GRLEKAMKLFESWVEK-GKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNG-------------------------IKVDILT 405
           YN L++   + G S     +  ++  +G                         +K DI +
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIES 727

Query: 406 -----------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
                      YN  I  LC  G+ K+A  ++ ++ +  +  + STY  L+ G   R+  
Sbjct: 728 VGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKR 787

Query: 455 E 455
           +
Sbjct: 788 Q 788



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 79/179 (44%), Gaps = 2/179 (1%)

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           V P++   N +++   +  ++   ASL  +  ++   +  +  T+N L+   C +G    
Sbjct: 168 VRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLAD 227

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   +  +    L P+A TY+ L+   C +     A  L   M + G  P +  +  L+S
Sbjct: 228 ALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVS 287

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + +     +A +V+  M      PD    + L +GL   GK + A KL  +ME  G++
Sbjct: 288 AYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIV 346


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 170/328 (51%), Gaps = 1/328 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           NK + + + +  +D A+G  + M  +   +PN ++ N+V+    K G    AV++F  M 
Sbjct: 156 NKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMP 215

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
               +P+  TYNT+I GH  KG L    +  + M ++G++PNVIT+N L+ G C+ G++ 
Sbjct: 216 EKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMG 275

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           E   +  EM +  + P+  TY+ L +G+ + G+S+   SL+EE ++ G+K+   T + L+
Sbjct: 276 ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILL 335

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
            GLCK+GK  KA  +++ L  + L+     Y+ LI G C   + E AF +++ M     R
Sbjct: 336 NGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIR 395

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           P+   +  L++   + E    A ++++EM +  + P     + L       G+ E    +
Sbjct: 396 PDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFII 455

Query: 531 FRKMEIRGLLPKGFDKLRTINCAPENGE 558
              M+ +GL P        +N   +NG+
Sbjct: 456 LSDMQEKGLKPNVVSYGSIVNAFCKNGK 483



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 168/342 (49%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L        K   A +    + + G L      N  ++       ++ A   +++M+  
Sbjct: 333 ILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSR 392

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+  T N +++   K+  I  A ++   ME  G  PSV T+NTLI  +   G L   
Sbjct: 393 LIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKC 452

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               + M++ G++PNV+++ +++  FCK GK+ EA  I  +M   +V P    YN +I+ 
Sbjct: 453 FIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDA 512

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + G+++    L E+M  +G+   I+TYN LI GLCK+ +  +A  L+  L    L P+
Sbjct: 513 YIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPD 572

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             +Y+ LI+  C R N++RA +L K M + G +P+   + ML S+            +  
Sbjct: 573 VISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQ 632

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +ML+K + P S I + +      CG++     L ++M  +G+
Sbjct: 633 QMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGI 674



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 156/294 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++E  +  +    YT +++++  CK G I +A EV + + + G + +   YNTLI+G
Sbjct: 313 LSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLING 372

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C  G L  A      M+   I+P+ IT+N LI G  K  ++ EA+ +  EM+   V+P+
Sbjct: 373 YCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPS 432

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG+ G  E    +  +M   G+K ++++Y +++   CK GK  +A  ++ 
Sbjct: 433 VETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    ++P A  Y+A+I       ++++AF L + M  SG  P+   + +L+   C+  
Sbjct: 493 DMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQS 552

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               A E+L  +    +APD I  + L S   +    + A++L ++M   G+ P
Sbjct: 553 QISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKP 606



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 164/357 (45%), Gaps = 4/357 (1%)

Query: 189 CDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           CD +P      ++++           +A   F +M +   +P   + N  +   +    +
Sbjct: 180 CDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDL 239

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           +     + +M R+ + PNV T N+++   C+ G +     V   M S   +P   TY+ L
Sbjct: 240 ESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSIL 299

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             GH   G     +       K G++    T + L+ G CK GK+ +A  +   +  + +
Sbjct: 300 FDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGL 359

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
               V YNTLINGY Q+G+ E   S++++M    I+ D +TYNALI GL K  +  +A  
Sbjct: 360 LQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHD 419

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           LV +++KN + P+  T++ LI         E+ F +   M   G +PN   +  +++ FC
Sbjct: 420 LVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFC 479

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +N     A  +L +M  K + P + + + +      CG  + A  L  KM+  G+ P
Sbjct: 480 KNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPP 536



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 154/345 (44%), Gaps = 19/345 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY--------------- 186
           T SI+L+ L K+ K   +E +L+ +++S      + ++++++  Y               
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQT-TVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 187 ---RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
              R+     + ++ L       ++   A D   +M   G  P +E+ N  + +   + +
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           ++       +M+   + PNV +   +++AFCK G I  AV +  +M     +P    YN 
Sbjct: 449 LEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNA 508

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I  +   G    A      M+ +G+ P+++T+N LI G CK+ ++ EA  +   ++   
Sbjct: 509 IIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYG 568

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           ++P+V++YNTLI+      N++    L +EM + GIK    TY  L   L   G+  +  
Sbjct: 569 LAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEME 628

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
            L + +    +VP +  Y+ ++          +   L K M   G
Sbjct: 629 NLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKG 673



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 87/177 (49%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP  +  N  + + ++    D A    ++M+ + + P++ T N+++   CK   I  A E
Sbjct: 500 LPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEE 559

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           +  ++ + G  P V +YNTLIS  C +     A++ +  M K GI+P+  T+  L     
Sbjct: 560 LLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLG 619

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
             G++HE   ++ +M   +V P    YN +++ Y + G      +L +EM   GI V
Sbjct: 620 GAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEMSDKGIAV 676


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/474 (24%), Positives = 212/474 (44%), Gaps = 43/474 (9%)

Query: 125 EFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
           EF  W+ +    S   +     +  ++  +R     E +  G++D  + D    LF  ++
Sbjct: 120 EFDEWIKEVDVGSDGKIRYEDFIARMVANDRNLSYRERLRSGLVDIKADD-AIDLFRDMI 178

Query: 184 YSYRMCDSSPLVFDL--LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           +S  +    P V D   LF   A  K++        QM   G    + + +  ++     
Sbjct: 179 HSRPL----PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 234

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            ++ +A     ++ +    PN  T + +++  C  G +  A+E+   M  MG  P + T 
Sbjct: 235 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 294

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF------------------------- 336
           NTL++G C  G  + AM   + M + G QPN +T+                         
Sbjct: 295 NTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEE 354

Query: 337 ----------NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
                     + +I G CK G L  A  +F+EM+   ++ N++TYN LI G+   G  + 
Sbjct: 355 RNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDD 414

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
           GA L  +M++  I  +++T++ LI    KEGK ++A  L K++    + P+  TY++LI 
Sbjct: 415 GAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLID 474

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C   + ++A Q+   M+  GC PN   F +L++ +C+    D   E+  +M  + +  
Sbjct: 475 GFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVA 534

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           D++  + L  G    GK  +A +LF++M  R + P        ++   +NGE E
Sbjct: 535 DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE 588



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A +   +M + G  P + + N  ++ L  S +   A+    +
Sbjct: 257 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 316

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T   V++  CK G    A+E+ + ME          Y+ +I G C  G 
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 376

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N ME  GI  N+IT+N LI GFC  G+  +  ++  +M    ++PNVVT++ 
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       L++EM+  GI  D +TY +LI G CKE    KA  +V  +    
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  T++ LI G C     +   +L++ M   G   +   +  L+  FC+    + A 
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + P+ +    L  GL   G+ E A+++F K+E
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 598



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 152/298 (51%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           NA + F +M   G    I + N  +    ++ R D      ++M + +I+PNV T ++++
Sbjct: 379 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 438

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            +F K G +  A E+ K M   G  P   TY +LI G C +  L  A +  +LM   G  
Sbjct: 439 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 498

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+ TFN LI G+CK  ++ +   +F +M    V  + VTYNTLI G+ ++G   +   L
Sbjct: 499 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 558

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++EM+   +  +I+TY  L+ GLC  G+++KA  + + ++K+ +  +   Y+ +I G C 
Sbjct: 559 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 618

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               + A+ L+ S+   G +P    + +++   C+      A  +  +M E   APD 
Sbjct: 619 ASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 149/301 (49%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   + EM    I+ N+ T N+++  FC  G  +   ++ ++M      P+V T++ 
Sbjct: 377 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 436

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI     +G L  A +    M   GI P+ IT+ +LI GFCK+  L +AN++   M +  
Sbjct: 437 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 496

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             PN+ T+N LINGY +    + G  L+ +M   G+  D +TYN LI G C+ GK   A 
Sbjct: 497 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 556

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L +++    + PN  TY  L+ G C    SE+A ++++ + +S    +  I+ +++   
Sbjct: 557 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 616

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C     D A ++   +  K + P     + +  GL   G    A  LFRKME  G  P G
Sbjct: 617 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 676

Query: 544 F 544
           +
Sbjct: 677 W 677



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 161/348 (46%), Gaps = 9/348 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +E   I  +I+T N        ++ G  ++  +D  +KL   ++   R  + + + F +L
Sbjct: 387 MEMKGITTNIITYN-------ILIGGFCNAGRWDDGAKLLRDMIK--RKINPNVVTFSVL 437

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
             ++    K R A +   +M   G  P   +    +        +D A      M     
Sbjct: 438 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 497

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            PN+ T N++++ +CK   I+  +E+F+ M   G +    TYNTLI G C  G L++A +
Sbjct: 498 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 557

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M    + PN++T+  L+ G C  G+  +A  IF +++ + +  ++  YN +I+G  
Sbjct: 558 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 617

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
                +    L+  +   G+K  + TYN +I GLCK+G   +A  L + ++++   P+  
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 677

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           TY+ LI       ++ ++ +L + + R G   +    +M++     ++
Sbjct: 678 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 174/345 (50%), Gaps = 2/345 (0%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +LL ++     +  +    F  +   G  P   + NK + + + +  +D AL   + M R
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186

Query: 257 NRISP--NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +  +P  + ++ N+V+    + G    A++VF  M   G  P+  TYNT+I GH   G L
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDL 246

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
               + ++ M ++G +PNV+T+N L+ G C+ G++ E   +  EM + ++ P+  TY+ L
Sbjct: 247 EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSIL 306

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
            +G  + G+S    SL+ E L+ G+ +   T + L+ GLCK+GK  KA  +++ L    L
Sbjct: 307 FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP  + Y+ LI G C  ++ + AF +++ M     RP+   +  L++  C+ E    A +
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAED 426

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +++EM +  + P     + L       G+ E    +   M+ +G+
Sbjct: 427 LVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGI 471



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 164/324 (50%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  Y  LP   + +     L  +      L  + E  +  +    YT +++++  CK G
Sbjct: 290 EMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDG 349

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A +V + +   G +P+   YNTLI+G+C    L  A      M+   I+P+ IT+N
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK   + EA  +  EM+ + V P+V T+NTLI+ YG+ G  E   ++  +M   
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK 469

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIK +++++ +++   CK GK  +A  ++ D+    +VPNA  Y+++I        +E+A
Sbjct: 470 GIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQA 529

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F L + M  SG   +   + +L+   C+N   D A E++  +  + + PD +  + + S 
Sbjct: 530 FLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISA 589

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
             + G  + A++L ++M    + P
Sbjct: 590 CCNKGDTDRALELLQEMHKYDIRP 613



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 135/261 (51%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P     N  ++       +  A   +++M+   I P+  T N +++  CK+ +I  A
Sbjct: 365 GLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEA 424

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++   ME  G  PSV T+NTLI  +   G L       + M+  GI+ NVI+F +++  
Sbjct: 425 EDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKA 484

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCK GK+ EA  I  +M   +V PN   YN++I+ Y + G +E    L E+M  +G+   
Sbjct: 485 FCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSAS 544

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I TYN L+ GLCK  +  +A  L+ +L    L P+  +Y+ +I+  C + +++RA +L +
Sbjct: 545 IFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQ 604

Query: 463 SMIRSGCRPNKHIFEMLMSTF 483
            M +   RP    +  L+S  
Sbjct: 605 EMHKYDIRPTLRTYHPLLSAL 625



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 164/369 (44%), Gaps = 9/369 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        K  +A   F +M D G  P   + N  +   +    ++       +M 
Sbjct: 198 YNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQML 257

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++   PNV T N+++   C+ G ++    +   M S   +P   TY+ L  G    G   
Sbjct: 258 QDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSR 317

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +       K G+     T + L+ G CK GK+ +A ++   +  T + P    YNTLI
Sbjct: 318 TMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLI 377

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY QV + +   S++E+M    I+ D +TYNALI GLCK     +A  LV +++K+ + 
Sbjct: 378 NGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVD 437

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI         E+ F +   M   G + N   F  ++  FC+N     A  +
Sbjct: 438 PSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAI 497

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLPKGFDK 546
           L +M+ K + P++ + + +       G  E A  L  KM+  G         LL KG  K
Sbjct: 498 LDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCK 557

Query: 547 LRTINCAPE 555
              I+ A E
Sbjct: 558 NSQIDEAEE 566



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 6/275 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L       +    A D   +M   G  P +E+ N  + +   + +++       +
Sbjct: 406 ITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSD 465

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   I  NV +   V+ AFCK G I  AV +  +M     +P+   YN++I  +   G 
Sbjct: 466 MQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGG 525

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A      M+ +G+  ++ T+N L+ G CK  ++ EA  +   +    + P+VV+YNT
Sbjct: 526 TEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNT 585

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+     G+++    L +EM +  I+  + TY+ L+  L   G+      L + +   +
Sbjct: 586 IISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKN 645

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           + P++S Y      +C  +N  +   L K M   G
Sbjct: 646 VEPSSSIYGT----RC--ENESKVASLKKEMSEKG 674



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/181 (19%), Positives = 77/181 (42%), Gaps = 2/181 (1%)

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P++ + N L+     VG      + +  ++  G + D   +N  +      G   +A  +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180

Query: 426 VKDLDKNSLVP--NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           ++ + ++   P  +A +Y+ +I G         A +++  M+  G  PN+  +  ++   
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            +  D +    +  +ML+    P+ +  + L SGL   G+ +    L  +M    +LP G
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 544 F 544
           F
Sbjct: 301 F 301


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 205/451 (45%), Gaps = 53/451 (11%)

Query: 113 LLKVQKDYVLSLEFFTWVQ----THKPSSLTLETHSIVLHILTKNRKFKSSESILRGI-- 166
           L+KV  D    L FF WV     +HK  S  L     +L  L + R   ++ + L  I  
Sbjct: 80  LIKVPAD---GLRFFDWVYNKGFSHKEQSFFL-----MLEFLGRARNLNAARNFLFSIEK 131

Query: 167 LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP 226
             +    L  + F+S                 L ++Y +   F+ + + F  M+  G  P
Sbjct: 132 RSNGCVKLQDRYFNS-----------------LIRSYGNAGLFQESVNLFQTMKKMGISP 174

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEV 285
            + + N  LS LL   R  +A   + EMRR   ++P+ YT N ++  FCK  ++++A  +
Sbjct: 175 SVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTI 234

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK--NGIQPNVITFNTLIFGF 343
           FK ME     P V TYNT+I G C  G + +A    N M K    + PN++++ TL+ G+
Sbjct: 235 FKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGY 294

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLING------YGQVGNSEMGASLYEEMLRN 397
           C K ++ EA  +F EM    + PN VTYNTLI G      Y ++    +G   +      
Sbjct: 295 CMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAF-----T 349

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D  T+N LI   C  G    A  + +++    L P++++YS LI   C+R   ++A
Sbjct: 350 TFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKA 409

Query: 458 FQLYKSMI-------RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
             L+  +        ++ C+P    + ++    C N    +A +V  +++++  A D   
Sbjct: 410 ETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSS 468

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              L +GL   GK + A +L   M  R  +P
Sbjct: 469 YRTLITGLCREGKFKAAYELLVLMLRREFVP 499



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 166/415 (40%), Gaps = 43/415 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  +    +   L + +L        + + +  L + Y  +++   A   F +M 
Sbjct: 252 TIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEML 311

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGII 279
             G  P   + N  +  L ++ R D   GF          SP+  T N+++ A C  G +
Sbjct: 312 TRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHL 371

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN-------LMEKNGIQPN 332
           + A++VF+ M +M   P   +Y+ LI   C +     A    N       L+ KN  +P 
Sbjct: 372 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPL 431

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
              +N +    C  GK  +A ++F + MK     P+  +Y TLI G  + G  +    L 
Sbjct: 432 AAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPS--SYRTLITGLCREGKFKAAYELL 489

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
             MLR     D  TY  LI GL K G+   A   ++ + ++S +P A+T+ +++     R
Sbjct: 490 VLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKR 549

Query: 452 KNSERAFQLYKSMIRSGCRPN--------KHIF------------------------EML 479
           K +  +F L   M+    R N        + +F                        E L
Sbjct: 550 KFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEEL 609

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +   C+N     A  ++L  LEK    D    + +  GL    +   A  L+ ++
Sbjct: 610 LDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNEL 664



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 118/312 (37%), Gaps = 40/312 (12%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM- 254
           F++L K +        A   F +M +    P   S +  + +L      D A   + E+ 
Sbjct: 358 FNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELF 417

Query: 255 ------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
                  +N   P     N++    C  G  ++A +VF+ +   G     ++Y TLI+G 
Sbjct: 418 EKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGL 476

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G    A +   LM +    P+  T+  LI G  K G+   A+     M  ++  P  
Sbjct: 477 CREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVA 536

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI-LTYNALILGLCKEGKTKK------ 421
            T+++++    +   +     L   ML   I+ +I L+  A+ L      K K       
Sbjct: 537 TTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRL 596

Query: 422 ---AAYLVKD-------------LDKNSLV---------PNASTYSALITGQCVRKNSER 456
                YL+K              LD ++LV          +  T + +I G C  K    
Sbjct: 597 LYDNGYLIKMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSE 656

Query: 457 AFQLYKSMIRSG 468
           AF LY  ++  G
Sbjct: 657 AFSLYNELVELG 668


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/439 (27%), Positives = 205/439 (46%), Gaps = 18/439 (4%)

Query: 100 LSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSS 159
           +S  L P  V  VL K QKD + +LE F  V+       +L T+  ++  L  +  F + 
Sbjct: 1   MSASLLPKHVAAVL-KQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAM 59

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E++L         D+ + L +              V+    K+Y  + K + A D F +M
Sbjct: 60  ENVLA----ETRMDIDNSLLEG-------------VYIGAMKSYGRKGKVQEAVDVFERM 102

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
             Y   P + S N  ++ L++S     A   +  M+   I P+VYT  + + +FC+    
Sbjct: 103 DFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRP 162

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A+ +  NM S G   +   Y T+++G   +     A +  N M + GI P+V TFN L
Sbjct: 163 HSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKL 222

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   CKKG++ E+ R+ +++    +  N+ T+N  I G  + G      S+ + ++R G+
Sbjct: 223 LHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL 282

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             D++TYN LI GLCK     +A   +  L    L P+  TY+ LI G C     + A +
Sbjct: 283 TPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEK 342

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           + +  I  G  P++  +  L++  CQN++ DRA  +    L K + P  I+ + L  GL 
Sbjct: 343 ILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLC 402

Query: 520 HCGKDELAMKLFRKMEIRG 538
             G    A+++  +M   G
Sbjct: 403 QEGLILQALQMMNEMSENG 421



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 191/395 (48%), Gaps = 18/395 (4%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           + T + +LH L K  + + SE +L  +L                    MC S+   F++ 
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKG-----------------MC-SNLFTFNIF 257

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
            +    +     A      +   G  P + + N  +  L  +  V  A  +  ++    +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+ +T N ++  +CK+G+++ A ++ +     GF+P   TY +LI+G C    +  A+ 
Sbjct: 318 EPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALA 377

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             N     G++P VI +N LI G C++G + +A ++ +EM     S ++ TYN +ING  
Sbjct: 378 LFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLC 437

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           ++G      +L  + +  G   D+ T+N LI G CK+ K +    ++  +  + + P+  
Sbjct: 438 KMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVI 497

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY++++ G      +E   + +++M+  GC PNK  + +L  + C+    + A +++ E+
Sbjct: 498 TYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEI 557

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           L K + PD++  + + SG  + G  + A +LFR+M
Sbjct: 558 LNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 157/330 (47%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A + F  M   G  P + + NK L +L     V  +     ++ +  +  N++T N+ + 
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQ 259

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C+ G++  A+ +  ++   G  P V TYNTLI G C    +  A K+ + +   G++P
Sbjct: 260 GLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEP 319

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +  T+NTLI G+CK G L  A +I          P+  TY +LING  Q    +   +L+
Sbjct: 320 DGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALF 379

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
              L  G+K  ++ YN LI GLC+EG   +A  ++ ++ +N    +  TY+ +I G C  
Sbjct: 380 NAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKM 439

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  L    I  G  P+   F  L+  +C+    +   ++L +M    + PD I  
Sbjct: 440 GCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITY 499

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + + +GL    K+E  M+ F  M  +G +P
Sbjct: 500 NSVLNGLSKAVKNEDLMETFETMVEKGCVP 529



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 168/358 (46%), Gaps = 1/358 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y      +NA          GF+P   +    ++ L  ++ +D AL  +    
Sbjct: 324 YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAAL 383

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P V   NM++   C+ G+I +A+++   M   G    + TYN +I+G C  G +S
Sbjct: 384 GKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVS 443

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    N     G  P+V TFNTLI G+CK+ K+    +I ++M +  V+P+V+TYN+++
Sbjct: 444 DANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVL 503

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  +   +E     +E M+  G   + +TYN L   LCK GK  +A  LV ++    + 
Sbjct: 504 NGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P+  +++ +I+G     + + A+QL++ M            + ++++ F +  D     +
Sbjct: 564 PDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEK 623

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
           + LEM     APD+     +  G    G  +   K   +M  +G +P      R INC
Sbjct: 624 LFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINC 681



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 149/321 (46%), Gaps = 1/321 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G  P +   N  +  L     +  AL    EM  N  S +++T N+V++  CK+G +  A
Sbjct: 386 GLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +  +  + G++P V T+NTLI G+C +  +   ++  N M  +G+ P+VIT+N+++ G
Sbjct: 446 NNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNG 505

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             K  K  +    F  M      PN +TYN L     + G       L +E+L  GI  D
Sbjct: 506 LSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPD 565

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN-ASTYSALITGQCVRKNSERAFQLY 461
            +++  +I G    G  K A  L + + +   V +  +TY+ +I     + +     +L+
Sbjct: 566 TVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLF 625

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   GC P+ + + +++  FC   + D   + LLEM+EK   P       + + L   
Sbjct: 626 LEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQ 685

Query: 522 GKDELAMKLFRKMEIRGLLPK 542
            +   A+ +   M   G++P+
Sbjct: 686 HRVHEAVDIIHFMVHNGIVPE 706



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 138/289 (47%)

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           M ++ + G ++ AV+VF+ M+     PSV +YN +++     G    A K    M+  GI
Sbjct: 83  MKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGI 142

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
            P+V TF   I  FC+  + H A R+ + M +     N V Y T++ G+ +         
Sbjct: 143 VPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYE 202

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ +MLR GI  D+ T+N L+  LCK+G+ +++  L+  + K  +  N  T++  I G C
Sbjct: 203 LFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLC 262

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +     A  +  S+IR G  P+   +  L+   C+N +   A + L +++   + PD  
Sbjct: 263 RKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGF 322

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             + L  G    G  + A K+ +    +G +P  F     IN   +N E
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 101/229 (44%), Gaps = 10/229 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           +H +   ++T N       S+L G+  +   +   + F++++   + C  + + +++L +
Sbjct: 489 SHGVTPDVITYN-------SVLNGLSKAVKNEDLMETFETMVE--KGCVPNKITYNILTE 539

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRIS 260
           +     K   A D   ++ + G  P   S    +S   ++  +  A   ++ M  + ++S
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
               T N++++AF +   +    ++F  M + G  P   TY  +I G C  G      KF
Sbjct: 600 HTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF 659

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
              M + G  P++ TF  +I   C + ++HEA  I   M    + P VV
Sbjct: 660 LLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 154/303 (50%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           ++FR A   F  M + G  P   +    + SL     +D AL  +  MR   I   VY  
Sbjct: 349 RRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPY 408

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N +++ +C+     +A  +   M   G  PS  +Y+ LI+G C KG L+ AM+    M +
Sbjct: 409 NSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMAR 468

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           NG+  NV TF TLI GFCK G + EA R+F +M  ++V PN VT+N +I GY +VGN   
Sbjct: 469 NGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRK 528

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              LY++M+  G+  D  TY +LI  LC      KA   V DL+ N +V N+ + + L+ 
Sbjct: 529 AFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMY 588

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C        + ++  M   G + +   F +++    +  D ++ + +  EM EK + P
Sbjct: 589 GFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKP 648

Query: 507 DSI 509
           D++
Sbjct: 649 DNV 651



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 157/316 (49%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F+P + SC+  +  L     +D A      +    + PN++  N ++   CK      A 
Sbjct: 296 FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +F+ M + G  P+  TY  LI   C +G++  A+   + M + GI+  V  +N+LI G+
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGY 415

Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
           C+    H+A  + +EM    ++P+  +Y+ LI G  + G+      L+ EM RNG+  ++
Sbjct: 416 CQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNV 475

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
            T+  LI G CK+G   +AA L   +  +S+VPN  T++ +I G C   N  +AFQLY  
Sbjct: 476 YTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQ 535

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+  G  P+ + +  L+S  C      +A E + ++   C+  +S  L+ L  G    G+
Sbjct: 536 MVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGR 595

Query: 524 DELAMKLFRKMEIRGL 539
                 ++ +M  RG+
Sbjct: 596 LTETYHIWDEMRARGV 611



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 182/387 (47%), Gaps = 2/387 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  IL  ++    F L   LFD ++      D    V+    + Y   +    A     
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDE--YVYTAGIRAYCEIRNLDGARGLLT 219

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G        N  +  L  + RV  A+     M    I  +  T   +++ FC+  
Sbjct: 220 RMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTE 279

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+E+  +M S+ F+PSV + + ++ G   +G +  A +    + + G+ PN+   N
Sbjct: 280 ELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACN 339

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +  EA R+F  M    + PN VTY  LI+   + G  +    +++ M   
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GI+V +  YN+LI G C+     +A  L+ ++ +  L P+A++YS LI G C + +   A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L++ M R+G   N + F  L+S FC++ + D AA +  +M++  + P+ +  + +  G
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G    A +L+ +M  RGL P  +
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNY 546



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 168/338 (49%)

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           +Y   ++ R+A D        G      + ++ L +L+   +  +A   + EM + +   
Sbjct: 134 SYLRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPL 193

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           + Y     + A+C++  ++ A  +   MES G   S   YN L+ G C    +  A++ K
Sbjct: 194 DEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVK 253

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M + GI  + +T+ TL++GFC+  +L  A  +  +M + +  P+V + + +++G  + 
Sbjct: 254 NSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKR 313

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G+ +    L   +   G+  ++   NALI  LCK+ + ++A  L + +    L PN  TY
Sbjct: 314 GHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI   C R   + A  ++  M   G R   + +  L++ +CQ+++F +A  +L EM+E
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           K +AP +   S L +GL   G    AM+L R+M   G+
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 191/479 (39%), Gaps = 88/479 (18%)

Query: 150 LTKNRKFKSSESILRGILDS--DSFDLPSKLFDSILYSYRMCDSSPLVFDL--------- 198
           L K+R+F+ +E + RG+ +   +  ++   +    L    M D +  +FD          
Sbjct: 345 LCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVT 404

Query: 199 ------LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
                 L   Y     F  A     +M + G  P   S +  ++ L     +  A+  ++
Sbjct: 405 VYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHR 464

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM RN +S NVYT   ++  FCK G ++ A  +F  M     +P+  T+N +I G+C  G
Sbjct: 465 EMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVG 524

Query: 313 LLSLAMKFKNLMEKNGIQP-----------------------------------NVITFN 337
            +  A +  + M   G+ P                                   N  +  
Sbjct: 525 NVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLT 584

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           TL++GFCK+G+L E   I+ EM+A  V  +++++  ++    ++ + E  + L+ EM   
Sbjct: 585 TLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEK 644

Query: 398 GIKVD-----------------------------------ILTYNALILGLCKEGKTKKA 422
           G+K D                                   ++TY  LI  LCK G    A
Sbjct: 645 GVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSA 704

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L +++     +PN+ TY+  +         E+A  L+ +++  GC  N   F  L+  
Sbjct: 705 QILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKVLHATIL-EGCLANTVTFNTLIKG 763

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           FC+      A +++    E    PD I  S + + L   G    A +L+ +M  +GL P
Sbjct: 764 FCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKP 822



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 91/387 (23%), Positives = 162/387 (41%), Gaps = 46/387 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTF 216
           +++ G     + D  ++LFD      +M DSS     + F+++ + Y      R A   +
Sbjct: 480 TLISGFCKDGNMDEAARLFD------KMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLY 533

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            QM D G  P   +    +S L  +     A  F  ++  N +  N ++L  +M+ FCK 
Sbjct: 534 DQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKE 593

Query: 277 GII-----------------------------------ERAVEVFKNMESMGFIPSVTTY 301
           G +                                   E+   +F+ M+  G  P    +
Sbjct: 594 GRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFH 653

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             +I  H  +  +  A+   + M  +G  PNV+T+  LI   CK G L  A  +  EM  
Sbjct: 654 TCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV 713

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               PN  TYN  ++     G  E    L+  +L  G   + +T+N LI G CK G+ + 
Sbjct: 714 GRFLPNSFTYNCFLDFLANEGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQG 772

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  L+++  ++   P+  +YS +I   C   +  +AFQL+  M+  G +P+   + +L+ 
Sbjct: 773 AIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIR 832

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               + +FD+   +  +M+    A D+
Sbjct: 833 WCNIHGEFDKGLGIYSDMVNLKYADDT 859


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 206/471 (43%), Gaps = 77/471 (16%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF-DSILYSYRMCDSS 192
           +P    L++ ++  H L   R   ++ +IL   L    F  P + F +  + +Y+   S 
Sbjct: 142 RPHPHLLQSFAVAAH-LAAVRDPGAARAILVRAL---RFPSPHRHFVEQFISTYKAFSSD 197

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK------------------- 233
           P+ FDLL            +     ++R YG  P  ESCN                    
Sbjct: 198 PVSFDLLLLCLP-------SAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPE 250

Query: 234 --------FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--------- 276
                    L +L  + R+  A   + EM      P+V T  +++H +C L         
Sbjct: 251 KNTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIMVHGYCTLSELETAIKL 307

Query: 277 --------------------------GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
                                     G +  AV V ++M   G +     + T++SG C 
Sbjct: 308 LSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCR 367

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L+ A  + + M+K G+  + +T+  LI G C+ G+L EA R+  EM+   +  + VT
Sbjct: 368 KGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVT 427

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y  LI+GY +VG       ++ +M++  +  +++TY AL  GLCK+G    A  L+ ++ 
Sbjct: 428 YTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMC 487

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
              L  N  TY++LI G C   N E+A +    M  +G +P+ + +  ++   CQ+++ D
Sbjct: 488 SKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELD 547

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           RA  +L EML+K + P  +  + L +G    G+ E   +L   M  + + P
Sbjct: 548 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHP 598



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 167/356 (46%), Gaps = 11/356 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSP---LVFDLLFKTYAHRKKFRNATDTFCQ 218
           +L+ +  +       +LFD +        +SP   + + ++   Y    +   A     +
Sbjct: 259 LLKALCTAGRIKDAHQLFDEM--------ASPPDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G      +    ++ L D  +V  A+   ++M  + +  +      VM  FC+ G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A   F  M+  G      TY  LI+G C  G L  A +    ME  G+  + +T+  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G+CK GK+ EA  + ++M    V+PNVVTY  L +G  + G+      L  EM   G
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++++I TYN+LI GLCK G  ++A   + D+D+  L P+  TY+ +I   C  K  +RA 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
            L + M+  G +P    + +LM+ FC +   +    +L  MLEK + P++   + L
Sbjct: 551 SLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSL 606



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 161/340 (47%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF  +   +  +     A + F +M+  G      +    ++ L  +  +  A    +EM
Sbjct: 357 VFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEM 416

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               +  +  T  +++  +CK+G +  A  V   M      P+V TY  L  G C +G +
Sbjct: 417 EDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDV 476

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  + M   G++ N+ T+N+LI G CK G L +A R   +M    + P+V TY T+
Sbjct: 477 CAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTI 536

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I    Q    +   SL +EML  GIK  I+TYN L+ G C  G+ +    L++ + + ++
Sbjct: 537 IGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNI 596

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN +TY++L+   C+ KN +   ++YK M+     PN++ + +L+   C+  +   A  
Sbjct: 597 HPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALY 656

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              EM+EK     +   + L   L+   K   A +LF KM
Sbjct: 657 FHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 121/275 (44%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D   + + +L   Y    K   A     +M      P + +       L     V  A  
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              EM    +  N++T N +++  CK G +E+A+    +M+  G  P V TY T+I   C
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               L  A      M   GI+P ++T+N L+ GFC  G++    R+   M   N+ PN  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYN+L+  Y    N +    +Y+ ML   +  +  TYN LI G CK    K+A Y   ++
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            +      AS+Y+ALI     +K    A +L++ M
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 108/234 (46%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  +  ++ A+    +M    + P+VYT   ++ A C+   ++RA  + + M  
Sbjct: 499 NSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLD 558

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P++ TYN L++G C  G +    +    M +  I PN  T+N+L+  +C +  +  
Sbjct: 559 KGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
              I+  M +  V PN  TYN LI G+ +  N +     + EM+  G ++   +YNALI 
Sbjct: 619 TTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIR 678

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            L K+ K  +A  L + + K  L      Y+  I       N E    L   ++
Sbjct: 679 LLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 15/236 (6%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           E  +R ++D D   L   ++        +C S               K+   A     +M
Sbjct: 512 EQAMRTMIDMDEAGLKPDVYTYTTIIGALCQS---------------KELDRAHSLLQEM 556

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D G  P I + N  ++    S RV+      + M    I PN  T N +M  +C    +
Sbjct: 557 LDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNM 616

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +   E++K M S   +P+  TYN LI GHC    +  A+ F + M + G +    ++N L
Sbjct: 617 KSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNAL 676

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           I    KK K  EA R+F +M+   ++     YN  I+      N E   +L +E++
Sbjct: 677 IRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNLESTLALCDELV 732



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 2/203 (0%)

Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
              A  T   M + G  P + +    + +L  S+ +D A    +EM    I P + T N+
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKN 327
           +M+ FC  G +E    + + M      P+ TTYN+L+  +C  K + S    +K ++ + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + PN  T+N LI G CK   + EA    SEM          +YN LI    +       
Sbjct: 631 -VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEA 689

Query: 388 ASLYEEMLRNGIKVDILTYNALI 410
             L+E+M +  +  +   YN  I
Sbjct: 690 RRLFEKMRKERLTAEPDVYNFYI 712



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           +YN L+  LC  G+ K A  L    D+ +  P+  TY  ++ G C     E A +L   M
Sbjct: 255 SYNILLKALCTAGRIKDAHQL---FDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEM 311

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   N   +  +++  C       A  V+ +M+   +  D+ + + + SG    G  
Sbjct: 312 AARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDL 371

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
             A   F +M+ RGL   G      IN     GE
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGE 405


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 236/538 (43%), Gaps = 78/538 (14%)

Query: 63  PIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTP-----FRVKHVLLKVQ 117
           P  IP R   E K    D + I  SH     W++  +L TH T        V H +L   
Sbjct: 22  PFSIPFRG--EIKRLVNDTIQILKSH---EKWEQ--SLQTHFTESDIPIIDVTHFVLDRI 74

Query: 118 KDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPS 176
            D  L L+FF W   +  S SL   ++S +L +L++ R F   E  L  +   ++     
Sbjct: 75  NDVELGLKFFDWASKNSLSGSLNGTSYSSLLKLLSRFRVFPEIEFTLEEMKTKETIPTRE 134

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
            L D +L +Y    +   + D   + Y    K  N+            LP   +CN  L+
Sbjct: 135 ALSD-VLCAY----ADVGLVDKALEVYHGVVKLHNS------------LPSTYACNSLLN 177

Query: 237 SLLDSERVDIALGFYKEM--RRN--RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            L+   R++ A   Y EM  R N   I  + YT ++++   C  G IE  +++ ++    
Sbjct: 178 LLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGK 237

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P++  YNTLI G+C KG +  A K    ++  G  P + TF +L+ GFCK G     
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAI 297

Query: 353 NRIFSEMKATNVS-----------------------------------PNVVTYNTLING 377
           + +  EMK   +S                                   P++VTYNTLIN 
Sbjct: 298 DLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINH 357

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +   G  E    L E+ +R G+  + LTY  L+ G CK+G+  KA   + ++  + L  +
Sbjct: 358 FCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVD 417

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             +Y ALI G  V    + A  +   M+  G  P+ +I+ +LM+   +      A  +L 
Sbjct: 418 MISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLT 477

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDK 546
           EML++ +APD+ + + L  G    G  + A KLF+ +  +GL P         KGF K
Sbjct: 478 EMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSK 535



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 196/437 (44%), Gaps = 27/437 (6%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFD-----------------LPSKLFDSI-LYSYR 187
           +L++L K+R+ +++  +   ++D D+ D                 L  ++ D I L   R
Sbjct: 175 LLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESR 234

Query: 188 M---CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS--- 241
               C  + + ++ L   Y  + +  +A   F +++  GF+P +++    ++        
Sbjct: 235 WGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMF 294

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           E +D+ L    EM+   +S NV   N ++ A  KLG   +A +  K M      P + TY
Sbjct: 295 EAIDLLL---LEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTY 351

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NTLI+  C++G +  A K      + G+ PN +T+  L+ G+CK+G+  +A     EM  
Sbjct: 352 NTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMST 411

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           + +  ++++Y  LI+G    G  +   ++ + M+  GI  D   YN L+ GL K+GK   
Sbjct: 412 SGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSM 471

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  ++ ++   ++ P+A  Y+ L+ G     N + A +L++ +I  G  P    + +++ 
Sbjct: 472 AKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIK 531

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            F ++   D A   + +M      PD    S +  G          +K+F  M  +   P
Sbjct: 532 GFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKP 591

Query: 542 KGFDKLRTINCAPENGE 558
                   IN     GE
Sbjct: 592 NVVTYTSLINGYCRKGE 608



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 149/330 (45%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A DT  +M +    P + + N  ++       V+ A    ++  R  ++PN  T   ++H
Sbjct: 332 AKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVH 391

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            +CK G   +A +    M + G    + +Y  LI G    G +  A+  ++ M   GI P
Sbjct: 392 GYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILP 451

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   +N L+ G  KKGKL  A  + +EM   N++P+   Y TL++G+ + GN +    L+
Sbjct: 452 DANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLF 511

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           + ++  G+   ++ YN +I G  K G    A   +  + +   VP+  T+S +I G   +
Sbjct: 512 QLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQ 571

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N     +++  M++  C+PN   +  L++ +C+  +   A ++   M    + P  +  
Sbjct: 572 HNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTY 631

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           S L        K   A+  F  M I    P
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTP 661



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 134/290 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  L   Y  + ++  ATD   +M   G    + S    +  L+ +  VD AL     
Sbjct: 384 LTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDR 443

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P+    N++M+   K G +  A  +   M      P    Y TL+ G    G 
Sbjct: 444 MMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGN 503

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K   L+ + G+ P V+ +N +I GF K G +  A     +M+  +  P++ T++T
Sbjct: 504 LDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFST 563

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +  N      ++  M++   K +++TY +LI G C++G+TK A  L   +  + 
Sbjct: 564 IIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG 623

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           L P+  TYS LI   C      +A   ++ M+ + C PN   F  L++ F
Sbjct: 624 LKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGF 673



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 157/362 (43%), Gaps = 7/362 (1%)

Query: 152 KNRKFKSSESILRGILDSD---SFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRK 207
           K+R    +  +   I+D+     FD+ +K  D++   S   C+   + ++ L   +  R 
Sbjct: 305 KDRGLSVNVQMYNNIIDARYKLGFDIKAK--DTLKEMSENCCEPDLVTYNTLINHFCSRG 362

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A     Q    G  P   +    +           A  +  EM  + +  ++ +  
Sbjct: 363 EVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYG 422

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++H     G ++ A+ +   M + G +P    YN L++G   KG LS+A      M   
Sbjct: 423 ALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQ 482

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            I P+   + TL+ GF + G L EA ++F  +    + P VV YN +I G+ + G  +  
Sbjct: 483 NIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNA 542

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
               ++M R     DI T++ +I G  K+        +   + K +  PN  TY++LI G
Sbjct: 543 ILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLING 602

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL-LEMLEKCMAP 506
            C +  ++ A +L+  M   G +P+   + +L+ +FC+     +A     L ++ KC   
Sbjct: 603 YCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPN 662

Query: 507 DS 508
           D+
Sbjct: 663 DA 664



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 18/330 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G +   + D   KLF  I+   +  D   + ++++ K ++      NA     +MR
Sbjct: 493 TLVDGFIRHGNLDEAKKLFQLIIE--KGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMR 550

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
               +P I + +  +   +    ++  L  +  M +    PNV T   +++ +C+ G  +
Sbjct: 551 RAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETK 610

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A ++F  M S G  PSV TY+ LI   C +  L  A+ +  LM  N   PN   F+ L+
Sbjct: 611 MAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLV 670

Query: 341 FGFC---------KKGKLHEANR-----IFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GF          +   LHE +R      FS M     +     YN ++    Q    + 
Sbjct: 671 NGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKT 730

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK-DLDKNSLVPNASTYSALI 445
              L  +ML  G+  D +++ ALI G+C EG +K+   ++  DL++  L   A  YS  +
Sbjct: 731 ALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMISCDLNEGEL-QIALKYSLEL 789

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
                      A  + ++MI+    PN+ +
Sbjct: 790 DKFIPEGGISEASGILQAMIKGYVSPNQDL 819


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 210/449 (46%), Gaps = 15/449 (3%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           L   RV  +   ++ +  L+  FFT ++        ++T++ ++ +L + R  +  +S+L
Sbjct: 61  LNTSRVVEIFYNLKNEPNLAWSFFTQLKESGFQH-NVDTYAALIRVLCRWRLERKLQSLL 119

Query: 164 RGILDSD----SFDLPSKLFDSILYSYRMCDSSP-----LVFDLLFKTYAHRKKFRNATD 214
             I+ S      FD+ + LFD +       +        LV D+L K Y     F  A D
Sbjct: 120 SEIVGSKESVLGFDITA-LFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAID 178

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
              Q +  GF+P I SCN  ++ L++  ++D+A+  Y+ ++R  ++PN YT  + + A C
Sbjct: 179 ALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALC 238

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           + G  E AV+VF+ ME  G  P+  T +T I G C+     L  +    +       +  
Sbjct: 239 RKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTF 298

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
            +  +I GFC + KL EA  +F +M    ++P+   Y  LI+ Y + GN     +L+ +M
Sbjct: 299 AYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDM 358

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + NGIK + +  ++++  LC+ G   +     K+   + +  +   Y+ ++   C     
Sbjct: 359 VSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKV 418

Query: 455 ERAFQLYKSMIRSGCRPNKHI--FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
           E A +L   M   G R +  +  +  L++ +C       A  +  EM E+ + PD +  +
Sbjct: 419 EEAVELLNEM--KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYN 476

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L  G    G  + A++L   +  +GL P
Sbjct: 477 ILVGGFSRNGLKKEALELLDCIGTQGLKP 505



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 163/379 (43%), Gaps = 31/379 (8%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
             +  + + +    K + A D F  M + G  P        + +   +  +  A+  + +
Sbjct: 298 FAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHND 357

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N I  N   ++ ++   C++G+    V+ FK     G       YN ++   C  G 
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGK 417

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++  N M+   +  +V+ + TLI G+C +GKL +A  +F EMK   + P++VTYN 
Sbjct: 418 VEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 477

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILT---------------------------- 405
           L+ G+ + G  +    L + +   G+K +  T                            
Sbjct: 478 LVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKC 537

Query: 406 ---YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
              Y+A++ G CK   T+KA  L   L K  ++    +   L++  C+    ++A  L +
Sbjct: 538 LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLE 597

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+     PN+ ++  L+  FC++ D  RA  V   ++E+ + PD I  + + +G     
Sbjct: 598 RMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVN 657

Query: 523 KDELAMKLFRKMEIRGLLP 541
               A  +F  M+ RG+ P
Sbjct: 658 CLREARDIFNDMKERGIKP 676



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 155/342 (45%), Gaps = 42/342 (12%)

Query: 123 SLEFFTWVQTH--KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFD 180
           +LE    + T   KP+S    TH+ ++  L    K K +E+ L            + L D
Sbjct: 491 ALELLDCIGTQGLKPNS---ATHNRIIEGLCMAGKVKEAEAFL------------NTLED 535

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
             L +Y     S +V       Y      R A + F ++   G L   +SC K LSSL  
Sbjct: 536 KCLENY-----SAMV-----DGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCM 585

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
               D AL   + M    + PN      ++ AFC+ G ++RA  VF  +   G  P V T
Sbjct: 586 EGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVIT 645

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK------------KGK 348
           Y  +I+G+C    L  A    N M++ GI+P+VIT+  ++ G  K            KG 
Sbjct: 646 YTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGS 705

Query: 349 LHE---ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             E   A+  +SEMK   + P+VV Y  LI+ + +  N +   +LY+EM+  G++ DI+T
Sbjct: 706 EEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVT 765

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
           Y AL+   C  G   +A  LV ++    + P++   S L  G
Sbjct: 766 YTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRG 807



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 148/347 (42%), Gaps = 4/347 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +  K    +  F  A D F +M + G  P   +C+ ++  L   +R D+     + +R
Sbjct: 230 YGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALR 289

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 + +    V+  FC    ++ A +VF +M + G  P    Y  LI  +C  G L 
Sbjct: 290 AANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLL 349

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   N M  NGI+ N +  ++++   C+ G   E    F E + + +  + V YN ++
Sbjct: 350 QAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVV 409

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   ++G  E    L  EM    + +D++ Y  LI G C +GK   A  + +++ +  + 
Sbjct: 410 DALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIE 469

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ L+ G       + A +L   +   G +PN      ++   C       A   
Sbjct: 470 PDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAF 529

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           L  + +KC+       S +  G         A +LF ++  +G+L K
Sbjct: 530 LNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILVK 572



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 122/265 (46%), Gaps = 15/265 (5%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++  +CK     +A E+F  +   G +    +   L+S  C +G    A+     M    
Sbjct: 544 MVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALD 603

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
           ++PN I +  LI  FC+ G +  A  +F  +    ++P+V+TY  +INGY +V       
Sbjct: 604 VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREAR 663

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCK---------------EGKTKKAAYLVKDLDKNS 433
            ++ +M   GIK D++TY  ++ G  K               E +   A+    ++ +  
Sbjct: 664 DIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMG 723

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+   Y+ LI   C   N + A  LY  MI  G +P+   +  L+S+ C   D DRA 
Sbjct: 724 IKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAI 783

Query: 494 EVLLEMLEKCMAPDSIILSELYSGL 518
            ++ EM  K + PDS  +S L+ G+
Sbjct: 784 TLVNEMSFKGIEPDSRAMSVLHRGI 808



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 152/353 (43%), Gaps = 55/353 (15%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
           L  + VD A   ++EM+   I P++ T N+++  F + G+ + A+E+   + + G  P+ 
Sbjct: 449 LQGKLVD-AKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNS 507

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            T+N +I G C  G +  A  F N +E   ++     ++ ++ G+CK     +A  +FS 
Sbjct: 508 ATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSR 563

Query: 359 -----------------------------------MKATNVSPNVVTYNTLINGYGQVGN 383
                                              M A +V PN + Y  LI  + + G+
Sbjct: 564 LSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGD 623

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
            +    +++ ++  GI  D++TY  +I G C+    ++A  +  D+ +  + P+  TY+ 
Sbjct: 624 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTV 683

Query: 444 LITGQC-----------VRKNSER----AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           ++ G               K SE     A   +  M   G +P+   + +L+ + C+  +
Sbjct: 684 VLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNN 743

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              A  +  EM+ + + PD +  + L S     G  + A+ L  +M  +G+ P
Sbjct: 744 LQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEP 796



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 17/173 (9%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-------IIESCNKF---------LSS 237
           + + ++   Y      R A D F  M++ G  P       +++  +K           S 
Sbjct: 644 ITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQFSK 703

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
             + E++D A  F+ EM+   I P+V    +++ + CK   ++ A+ ++  M + G  P 
Sbjct: 704 GSEEEKMD-ASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGLQPD 762

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           + TY  L+S  C++G +  A+   N M   GI+P+    + L  G  K  K+ 
Sbjct: 763 IVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARKVQ 815


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 190/430 (44%), Gaps = 42/430 (9%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-----VFDLLF 200
           +LH L + R  + S      +L + S   PS L  + L  +R      L      F+LL 
Sbjct: 157 LLHSLRRRRGVRPSLQAANAVLSALSRS-PSTLPQASLDVFRSLIELRLHPNHYTFNLLV 215

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
            T+  +    +A  T   M+ +G  P   + N  L++      +  A      M+R+ I+
Sbjct: 216 HTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P   T N ++ AF +LG I++A +V ++M + GF P + TYN L  G C  G +  A + 
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRL 335

Query: 321 KNLMEK------------------------------------NGIQPNVITFNTLIFGFC 344
           K+ ME+                                     G++P ++T N ++   C
Sbjct: 336 KDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+GKL EA     ++    ++P+V+TYNTLI+ Y + GN     +L +EM+  G+K+D  
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T N ++  LCK  + + A  L+    +   VP+  +Y  ++       N E A +L+  M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I     P+   +  L+   C+ E    A + L E++EK + PD    + +       G  
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 525 ELAMKLFRKM 534
           E A +   KM
Sbjct: 576 ENAFRFHNKM 585



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 178/390 (45%), Gaps = 40/390 (10%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERV--DIA 247
           +SPL  D     YA  +    A      +R   G  P +++ N  LS+L  S       +
Sbjct: 134 TSPLA-DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++ +   R+ PN YT N+++H  C  G +  A+     M+  G  P   TYNTL++ 
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI--------------------------- 340
           HC KG+L  A      M+++GI P   T+NTL+                           
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 341 --------FGFCKKGKLHEANRIFSEMKATNVS-PNVVTYNTLINGYGQVGNSEMGASLY 391
                    G C+ GK+ EA R+  EM+  + + P+VVTYNTL++   +   S     L 
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM   G+K  ++T+N ++  LCKEGK ++A   ++ + +  L P+  TY+ LI   C  
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N  +AF L   M+  G + +      ++   C+ + ++ A E+L    ++   PD +  
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + +        E A++L+ +M  R L+P
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIP 522



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 174/403 (43%), Gaps = 36/403 (8%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD---------- 245
           ++ L   +A     + AT     M  YGF P + + N     L  + +VD          
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEME 340

Query: 246 --------------------------IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
                                      AL   +EMR   + P + T N+V+ + CK G +
Sbjct: 341 RLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A+   + +   G  P V TYNTLI  +C  G ++ A    + M   G++ +  T NT+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++  CK  +  +A  +          P+ V+Y T++  Y +  N E    L+++M+   +
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              I TYN LI GLC+  + K+A   + +L +  LVP+ +TY+ +I   C   + E AF+
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            +  M+ +  +P+      LM+  C +   D+A ++    +EK    D I  + L   + 
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             G  + A+  F  ME++GL P  F     ++   E G  E  
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 136/310 (43%), Gaps = 35/310 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  +++ K+     K   A     ++ + G  P + + N  + +   +  V  A     E
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------------------- 294
           M    +  + +TLN V++  CK+   E A E+  +    GF                   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 295 ----------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                           IPS++TYNTLI G C    L  A+   N + + G+ P+  T+N 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I  +CK+G L  A R  ++M   +  P+VVT NTL+NG    G  +    L+E  +  G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            KVD++TYN LI  +CK G    A +   D++   L P+A TY+ +++       SE A 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 459 QLYKSMIRSG 468
            +   +  SG
Sbjct: 685 NMLHKLADSG 694



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 153/351 (43%), Gaps = 56/351 (15%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T + VL+ L K ++++ +E +L           P + F     SY        V    FK
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSP--------PQRGFVPDEVSYGT------VMAAYFK 501

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y      R     + QM +   +P I + N  +  L   ER+  A+    E+    + P
Sbjct: 502 EYNPEPALR----LWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVP 557

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-F 320
           +  T N+++HA+CK G +E A      M    F P V T NTL++G C  G L  A+K F
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           ++ +EK G + +VIT+NTLI   CK G +  A   F +M+   + P+  TYN +++   +
Sbjct: 618 ESWVEK-GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSE 676

Query: 381 VGNSEMGASLYEEMLRNGI----------------KVDIL-------------------- 404
            G SE   ++  ++  +G                 + D+                     
Sbjct: 677 AGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALE 736

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           TY   + GLC  G+ K+A  ++ ++ +  +  ++STY  L+ G   R+  +
Sbjct: 737 TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKRQ 787



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 36/264 (13%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L K     ++ + A D   ++ + G +P   + N  + +      ++ A  F+ +M 
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N   P+V T N +M+  C  G +++A+++F++    G    V TYNTLI   C  G + 
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF------------------- 356
            A+ F + ME  G+QP+  T+N ++    + G+  EA+ +                    
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 357 ------SEMKATNVSPN-----------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
                 +++K     P            + TY   +NG    G  +   ++ +EM++ G+
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 400 KVDILTYNALILGLCKEGKTKKAA 423
            VD  TY  L+ GL K  K +  A
Sbjct: 767 PVDSSTYITLMEGLIKRQKRQTHA 790


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   YA ++K   A   F +MR +G  P +      +  L  S  VD A+ ++++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++PN+     ++H  C     ++A E+   M   G   +   +N++I  HC +G +
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT+NTLI G C  GK+ EA ++ + M +  V P++VTY TL
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY +V   +   +L++EM+ +G+  +I+TYN ++ GL    +T  A  L   + K+  
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +        + PD    S +   L   G  E    LF  ME  G
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R  G  P + S N  L+        D A   Y EM    I P+V T + ++ A CK   +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++A+EV   M   G +P   TYN+++ G+C+ G    A+     M  +G++PNV+T+++L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   CK G+  EA +IF  M    + P++ TY TL+ GY   G      +L + M+RNGI
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + D   +N LI    K+ K  +A  +   + ++ L PN   Y  +I   C   + + A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            ++ MI  G  PN  ++  L+   C  + +D+A E++LEML++ +  ++I  + +     
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIID--S 490

Query: 520 HC--GKDELAMKLFRKMEIRGLLP 541
           HC  G+   + KLF  M   G+ P
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKP 514



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 165/330 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     S +   A+G  K+MR + + PNV T + +M+
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P + TY TL+ G+  KG L       +LM +NGIQP
Sbjct: 315 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN LI  + K+ K+ +A  +FS+M+   ++PNVV Y T+I+   + G+ +     +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+  +I+ Y +LI GLC   K  KA  L+ ++    +  N   ++++I   C  
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+   C     D A ++L  M+   + PD +  
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             L +G     + + A+ LF++M   G+ P
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSP 584



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 6/380 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FDS+  + R  +     +  L + YA +            M   G  P     N  + 
Sbjct: 327 KIFDSM--TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +    E+VD A+  + +MR++ ++PNV     V+   CK G ++ A+  F+ M   G  P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  Y +LI G C       A +    M   GI  N I FN++I   CK+G++ E+ ++F
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    V P+++TYNTLI+G    G  +    L   M+  G+K DI+TY  LI G C+ 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +   A  L K++  + + PN  TY+ ++ G    + +  A +LY S+ +SG +     +
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +++   C+N   D A  +   +    +  ++   + +   L  CG+ + A  LF     
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 537 RGLLPKGFDKLRTINCAPEN 556
            GL+P     +RT +   EN
Sbjct: 685 NGLVP----DVRTYSLMAEN 700



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 14/332 (4%)

Query: 180 DSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIESCNKF 234
           D++LY  +M D   +P  +V+  L        K+  A +   +M D G  L  I     F
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI-----F 483

Query: 235 LSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            +S++DS     RV  +   +  M R  + P++ T N ++   C  G ++ A ++  +M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           S+G  P + TY TLI+G+C    +  A+     M  +G+ PN+IT+N ++ G     +  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+N +I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L K G+  +A  L      N LVP+  TYS +      + + E    L+ SM  +GC 
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +  +   ++    Q  D  RA   L  + EK
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 131/310 (42%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P+V TY  LI 
Sbjct: 43  FDELLRRGR-GASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G + + ITF  L+ G C   +  +A              
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +     P+VV+YNT++NG+ + G+S+  
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML  GI  D++TY+++I  LCK     KA  ++  + KN ++P+  TY++++ G
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A    K M   G  PN   +  LM+  C+N     A ++   M ++ + PD
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 341 IATYRTLLQG 350



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 23/324 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
            ++ ++H L    K+  +E ++  +LD     L +  F+SI+ S+    R+ +S  L FD
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKL-FD 505

Query: 198 LLFK--------TY-------AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+ +        TY           K   AT     M   G  P I +    ++      
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+D AL  +KEM  + +SPN+ T N+++           A E++ ++   G    ++TYN
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            ++ G C   L   A++ F+NL   + +Q    TFN +I    K G++ EA  +F+   A
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + P+V TY+ +     + G+ E    L+  M  NG   D    N+++  L + G   +
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 744

Query: 422 AAYLVKDLDKNSLVPNASTYSALI 445
           A   +  +D+      AST S L+
Sbjct: 745 AGTYLFMIDEKHFSLEASTASFLL 768



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 5/193 (2%)

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           NR+ +   A  V+P V TY  LI    + G  ++G +    +++ G +VD +T+  L+ G
Sbjct: 78  NRM-ARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136

Query: 413 LCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGC 469
           LC + +T  A  +V + + +   +P+  +Y+ L+ G C    S+ A +L   M   R G 
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196

Query: 470 RPNKHI-FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
            P   + +  +++ F +  D D+A     EML++ + PD +  S + + L      + AM
Sbjct: 197 SPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAM 256

Query: 529 KLFRKMEIRGLLP 541
           ++   M   G++P
Sbjct: 257 EVLNTMVKNGVMP 269


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 172/379 (45%), Gaps = 8/379 (2%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S S D    L DS+       D+S   F+ L    A        T  F  MRD    P +
Sbjct: 115 SSSADAARFLRDSLAAGAPPPDTS--AFNTLLDALAQAGDLPGMTQLFASMRDASVRPNV 172

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMR--RNRISPNVYTLNMVMHAFCKLGIIERAVE-V 285
            +    +  L  + RV  AL     M    + + P+V  LN ++   CK G +++AV+ V
Sbjct: 173 VTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFV 232

Query: 286 FKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
            + M S+ G  P+  TYN L    C  G + +A +    MEK  + PN +T NT++ G C
Sbjct: 233 EERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLC 292

Query: 345 KKGKLHEANRIFSEMKAT--NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             G++  A   F E +        N VTY+TL+  +    N  +   L+ EM+  G   D
Sbjct: 293 WVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPD 352

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            + Y  +I GL + G+   A  +   + K     +A  Y+ LI G C RK    A++L  
Sbjct: 353 AIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLG 412

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M  +G +P+ + +  L+S  C+  DF    E+L +M++    P  +    L  G    G
Sbjct: 413 EMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVG 472

Query: 523 KDELAMKLFRKMEIRGLLP 541
           + + A+++FR M+  G+ P
Sbjct: 473 QIDEALRIFRSMDESGIQP 491



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 2/367 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  +       K  +  + S   C  + + ++ L   +        A +   +M 
Sbjct: 214 NIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKME 273

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR--NRISPNVYTLNMVMHAFCKLGI 278
                P   + N  +  L    RV  AL F++E R        N  T + ++ AF     
Sbjct: 274 KERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNN 333

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +  A+E+F  M   G  P    Y T+ISG    G L  A      M+K G Q +   +N 
Sbjct: 334 VGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNI 393

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI GFC++ +L+EA  +  EMK   + P+V TYNTL++G  + G+      L  +M+  G
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            +  ++T+  LI G CK G+  +A  + + +D++ + PN   Y+ LI   C  +++  A 
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L+  M       N   F  L+         ++A E++  M E    PD + +  L   L
Sbjct: 514 ELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWL 573

Query: 519 HHCGKDE 525
              G+ +
Sbjct: 574 PVIGETD 580



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 102/220 (46%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A      M+  GF    ++ N  +      +R++ A     EM+   + P+VYT N
Sbjct: 368 RLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYN 427

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G      E+   M   G  PSV T+ TLI G+C  G +  A++    M+++
Sbjct: 428 TLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GIQPN + +NTLI   CK      A  +F EM+  +V  NV T+N L+ G       E  
Sbjct: 488 GIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             L + M       D +T + L+  L   G+T +  + ++
Sbjct: 548 FELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQ 587


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 205/452 (45%), Gaps = 63/452 (13%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L+L FF  +        T  T  +++  L  + +  S + +L+  +    F     LF S
Sbjct: 57  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQ-MKLQGFHCSEDLFIS 115

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++  YR                A R     A + F +++++G  P ++  N  L +LL  
Sbjct: 116 VISVYRQVG------------LAER-----AVEMFYRIKEFGCDPSVKIYNHVLDTLLGE 158

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R+ +    Y++M+R+   PNV+T N+++ A CK   ++ A ++   M + G  P+  +Y
Sbjct: 159 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSY 218

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            T+IS  C  G++    + + L E+   +P V  +N LI G CK+        + SEM  
Sbjct: 219 TTVISSMCEVGMVK---EGRQLAER--FEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN------------------------ 397
             +SPNV++Y+TLIN     G  E+  SL  +ML+                         
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333

Query: 398 ------------GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                       G++ +++ YN L+ G C  G   KA  +   +++    PN  TY +LI
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML--EKC 503
            G   R + E A  ++  M+ SGC PN  ++  ++   C++  F + AE L+E++  E C
Sbjct: 394 NGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKF-KEAESLIEIMSKENC 452

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            AP     +    GL   G+ + A K+FR+ME
Sbjct: 453 -APSVPTFNAFIKGLCDAGRLDWAEKVFRQME 483



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 157/320 (49%), Gaps = 2/320 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P++   N  ++ L         +    EM    ISPNV + + +++     G IE A 
Sbjct: 241 FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAF 300

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFG 342
            +   M   G  P++ T ++L+ G   +G    A+   N M +  G+QPNV+ +NTL+ G
Sbjct: 301 SLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQG 360

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC  G + +A  +F  M+    SPN+ TY +LING+ + G+ E    ++ +ML +G   +
Sbjct: 361 FCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPN 420

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ Y +++  LC+  K K+A  L++ + K +  P+  T++A I G C     + A ++++
Sbjct: 421 VVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 480

Query: 463 SMIRS-GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            M +   C PN   +  L+    +    + A  +  E+  + +   +   + L  G  + 
Sbjct: 481 QMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNA 540

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G   +A++L  KM + G  P
Sbjct: 541 GLPGIALQLVGKMMVNGKSP 560



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 173/386 (44%), Gaps = 39/386 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V++ L       + ++   +   +M + G  P + S +  ++ L +S ++++A     +M
Sbjct: 247 VYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQM 306

Query: 255 RRNRISPNVYTL------------------------------------NMVMHAFCKLGI 278
            +    PN++TL                                    N ++  FC  G 
Sbjct: 307 LKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGN 366

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           I++AV VF +ME +G  P++ TY +LI+G   +G L  A+   N M  +G  PNV+ + +
Sbjct: 367 IDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTS 426

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN- 397
           ++   C+  K  EA  +   M   N +P+V T+N  I G    G  +    ++ +M +  
Sbjct: 427 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQY 486

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               +I+TYN L+ GL K  + ++A  L +++    +  + STY+ L+ G C       A
Sbjct: 487 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIA 546

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV--LLEMLEKCMAPDSIILSELY 515
            QL   M+ +G  P++    M++  +C+    +RA ++  L+    +   PD I  + + 
Sbjct: 547 LQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVI 606

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
            GL      E  + LF +M    ++P
Sbjct: 607 WGLCRSNCREDGVILFERMISERIIP 632



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 139/304 (45%), Gaps = 31/304 (10%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           V+  + ++G+ ERAVE+F  ++  G  PSV  YN ++     +  + +       M+++G
Sbjct: 116 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 175

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
            +PNV T+N L+   CK  K+  A ++  EM      PN V+Y T+I+   +VG  + G 
Sbjct: 176 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR 235

Query: 389 SLYE------------------------------EMLRNGIKVDILTYNALILGLCKEGK 418
            L E                              EM+  GI  ++++Y+ LI  L   G+
Sbjct: 236 QLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQ 295

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFE 477
            + A  L+  + K    PN  T S+L+ G  VR  +  A  ++  MIR  G +PN   + 
Sbjct: 296 IELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYN 355

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            L+  FC + + D+A  V L M E   +P+      L +G    G  E A+ ++ KM   
Sbjct: 356 TLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTS 415

Query: 538 GLLP 541
           G  P
Sbjct: 416 GCCP 419



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 146/333 (43%), Gaps = 6/333 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++  + +S   +L   L   +L   R C  +      L K    R    +A D + 
Sbjct: 282 SYSTLINELSNSGQIELAFSLLAQMLK--RGCHPNIHTLSSLVKGCFVRGTTFDALDMWN 339

Query: 218 QM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           QM R +G  P + + N  +        +D A+  +  M     SPN+ T   +++ F K 
Sbjct: 340 QMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKR 399

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G +E AV ++  M + G  P+V  Y +++   C       A     +M K    P+V TF
Sbjct: 400 GSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 459

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           N  I G C  G+L  A ++F +M+      PN+VTYN L++G  +    E    L  E+ 
Sbjct: 460 NAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIF 519

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G++    TYN L+ G C  G    A  LV  +  N   P+  T + +I   C +  +E
Sbjct: 520 MRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAE 579

Query: 456 RAFQLYK--SMIRSGCRPNKHIFEMLMSTFCQN 486
           RA Q+    S  R   RP+   +  ++   C++
Sbjct: 580 RAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRS 612



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 125/275 (45%), Gaps = 3/275 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L + +        A   F  M + G  P I +    ++       ++ A+  + +
Sbjct: 352 VAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNK 411

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  +   PNV     ++ A C+    + A  + + M      PSV T+N  I G C+ G 
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L  A K F+ + ++    PN++T+N L+ G  K  ++ EA  +  E+    V  +  TYN
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK--DLD 430
           TL++G    G   +   L  +M+ NG   D +T N +IL  CK+GK ++A  ++      
Sbjct: 532 TLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCG 591

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +    P+  +Y+ +I G C     E    L++ MI
Sbjct: 592 RRKWRPDVISYTNVIWGLCRSNCREDGVILFERMI 626


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 160/334 (47%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A   F  M+ +G LP + + +  +     +  V  A G YKE+    + PNV    
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  FCK   +  A  +F +M   G  P++  YN LI GHC  G +  A+   + ME  
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            + P+V T+  LI G C + ++ EANR+F +MK   + P+  TYN+LI+GY +  N E  
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L  EM  +G++ +I+T++ LI G C     K A  L  ++    +VP+  TY+ALI  
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                N + A +LY  M+ +G  PN H F  L+  F +      A +   E  ++    +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + L  GL   G    A + F  M   G+ P
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 204/421 (48%), Gaps = 9/421 (2%)

Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-----SDSFDLPSKLFD 180
           F T  ++    S  L++ S V+H+LT   K+  +  +++ +++     S+  ++  +LF+
Sbjct: 61  FETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFN 120

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           + L   +    S  VF LL   +     F  A       R+    P  ++C   L+ L+ 
Sbjct: 121 A-LEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVR 176

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             R D     Y+ M    + P+V+   ++     K G+  +  ++   M S+G  P+V  
Sbjct: 177 RRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI 236

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y   I   C    +  A K   LM+K+G+ PN+ T++ +I G+CK G + +A  ++ E+ 
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              + PNVV + TL++G+ +        SL+  M++ G+  ++  YN LI G CK G   
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A  L+ +++  +L P+  TY+ LI G C+      A +L++ M      P+   +  L+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +C+  + ++A ++  EM    + P+ I  S L  G  +    + AM L+ +M I+G++
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476

Query: 541 P 541
           P
Sbjct: 477 P 477



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 145/312 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +   Y      R A   + ++     LP +      +     +  +  A   +  M 
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  + PN+Y  N ++H  CK G +  AV +   MES+   P V TY  LI+G C +  ++
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M+   I P+  T+N+LI G+CK+  + +A  + SEM A+ V PN++T++TLI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY  V + +    LY EM   GI  D++TY ALI    KE   K+A  L  D+ +  + 
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T++ L+ G         A   Y+   +     N   F  L+   CQN    RA+  
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571

Query: 496 LLEMLEKCMAPD 507
             +M    + PD
Sbjct: 572 FSDMRSCGITPD 583



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 134/279 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF  L   +   ++   A   F  M  +G  P +   N  +     S  +  A+G   E
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +SP+V+T  ++++  C    +  A  +F+ M++    PS  TYN+LI G+C +  
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+   + M  +G++PN+ITF+TLI G+C    +  A  ++ EM    + P+VVTY  
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + +  N +    LY +ML  GI  +  T+  L+ G  KEG+   A    ++ ++  
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              N   ++ LI G C      RA + +  M   G  P+
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 1/304 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D +  V++ L   +        A     +M      P + +    ++ L   ++V  A  
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +++M+  RI P+  T N ++H +CK   +E+A+++   M + G  P++ T++TLI G+C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           N   +  AM     M   GI P+V+T+  LI    K+  + EA R++S+M    + PN  
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T+  L++G+ + G   +    Y+E  +     + + +  LI GLC+ G   +A+    D+
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               + P+  +Y +++ G    K       L   MI++G  PN  +   L++ F Q   +
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL-LVNQLLARFYQANGY 634

Query: 490 DRAA 493
            ++A
Sbjct: 635 VKSA 638



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 105/234 (44%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++ L   Y        A D   +M   G  P I + +  +    +   +  A+G Y
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    I P+V T   ++ A  K   ++ A+ ++ +M   G  P+  T+  L+ G   +
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G LS+A+ F     +     N + F  LI G C+ G +  A+R FS+M++  ++P++ +Y
Sbjct: 528 GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            +++ G+ Q         L  +M++ GI  ++L    L       G  K A +L
Sbjct: 588 VSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 9/273 (3%)

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           R     ++++S  F  S+  ++ LI      GL   A+     M+     P+     +++
Sbjct: 117 RLFNALEDIQSPKF--SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSIL 171

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  ++ +       +  M +  + P+V  Y  L     + G       L +EM   GIK
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++  Y   IL LC++ K ++A  + + + K+ ++PN  TYSA+I G C   N  +A+ L
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           YK ++ +   PN  +F  L+  FC+  +   A  + + M++  + P+  + + L  G  H
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG--H 349

Query: 521 CGKDEL--AMKLFRKMEIRGLLPKGFDKLRTIN 551
           C    +  A+ L  +ME   L P  F     IN
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
            chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 165/326 (50%), Gaps = 6/326 (1%)

Query: 156  FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF--DLLFKTYAHRKKFRNAT 213
             ++  S++ G+L +   ++   LF    Y  +    +P VF  +L         K +   
Sbjct: 788  LEAYNSLIDGLLKARLTEMAWGLF----YKMKNAGCTPDVFTYNLFLDALGKSGKIKELF 843

Query: 214  DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
            D + +M   G  P   + N  +  L+ S  +D A+  Y ++     SP  +T   ++   
Sbjct: 844  DLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGL 903

Query: 274  CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
             KLG +E A + F+ M   G +P+   YN L++G   +G +  A +    M K GI+P++
Sbjct: 904  LKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDL 963

Query: 334  ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
             +++ ++   C  GK+ +A   F E+K + + P++V YN +ING G+    E   SL++E
Sbjct: 964  KSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDE 1023

Query: 394  MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            M   GI  D+ TYNALIL L   G  ++A  + ++L    L PN  TY+ALI G  +  N
Sbjct: 1024 MRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGN 1083

Query: 454  SERAFQLYKSMIRSGCRPNKHIFEML 479
             +RA+ +YK M+  GCRPN   F  L
Sbjct: 1084 PDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 159/320 (49%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           + +M   G+LP + +    + +L    +VD A G    M++  ++PN++T N ++    +
Sbjct: 355 WSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLR 414

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           L  ++ A+E+F +MES+G   +  TY   I  +   G    A+K    M+ NGI PN++ 
Sbjct: 415 LNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
            N  ++   ++G+L EA   F+ +K   ++P+ +TYN L+  YG+ G  +    L  EM 
Sbjct: 475 CNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEME 534

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
            NG   +++  N+LI  L K  +  +A  + + + +  L P   TY+ L+ G       +
Sbjct: 535 ENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQ 594

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L+K MI   C PN   F  L+   C+N + D A ++L  M E    PD +  + + 
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVI 654

Query: 516 SGLHHCGKDELAMKLFRKME 535
            GL    +   A  LF +M+
Sbjct: 655 YGLIKENRVNYAFWLFHQMK 674



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 195/425 (45%), Gaps = 21/425 (4%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS   L+T+S ++  L K R  ++   +L+   + +S  L   +     Y++ +C    
Sbjct: 224 KPS---LKTYSALMVALGKRRDIETVMGLLQ---EMESLGLRPNI-----YTFTIC---- 268

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
                  +      K   A     +M D G  P + +    + +L ++ +++ A   + +
Sbjct: 269 ------IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ +   P+  T   ++  F   G ++   E +  ME+ G++P V T+  LI   C  G 
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A    ++M+K G+ PN+ T+NTLI G  +  +L EA  +F+ M++  +     TY  
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            I+ YG+ G S      +E+M  NGI  +I+  NA +  L ++G+ ++A      L K  
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+A TY+ L+         + A +L   M  +GC P   I   L+ T  + +  D A 
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           ++   M E  +AP  +  + L +GL   G+ + A  LF+ M      P        ++C 
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622

Query: 554 PENGE 558
            +NGE
Sbjct: 623 CKNGE 627



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 176/383 (45%), Gaps = 3/383 (0%)

Query: 160  ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
            E ++ GIL        S LF   L    +C+   ++  L+ K      K  +A + F ++
Sbjct: 721  EDLMGGILIEAEIG-QSILFAESLVCNTICEDDSVLIPLV-KFLCKHGKAVDAYNVFLKL 778

Query: 220  -RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
             + +   P +E+ N  +  LL +   ++A G + +M+    +P+V+T N+ + A  K G 
Sbjct: 779  TKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGK 838

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            I+   ++++ M   G  P+  T+N +I G      L  A+     +      P   T+  
Sbjct: 839  IKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGP 898

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            LI G  K G+L EA + F EM      PN   YN L+NG+G+ G+ E    L+  M++ G
Sbjct: 899  LIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG 958

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            I+ D+ +Y+ ++  LC  GK   A +  ++L  + L P+   Y+ +I G    +  E A 
Sbjct: 959  IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             L+  M   G  P+ + +  L+         + A ++  E+  K + P+    + L  G 
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078

Query: 519  HHCGKDELAMKLFRKMEIRGLLP 541
               G  + A  +++KM + G  P
Sbjct: 1079 SMSGNPDRAYAVYKKMMVGGCRP 1101



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 187/421 (44%), Gaps = 40/421 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+L  +  D   +LF+S+       +++   + L    Y    +   A  TF +M+
Sbjct: 407 TLICGLLRLNRLDEALELFNSM--ESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMK 464

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P I +CN  L SL +  R++ A  F+  +++  ++P+  T N++M  + K G ++
Sbjct: 465 TNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVD 524

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++   ME  G  P V   N+LI        +  A K    M++  + P V+T+NTL+
Sbjct: 525 DAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLL 584

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K+G++ EA  +F  M A +  PN +++NTL++   + G  ++   +   M      
Sbjct: 585 AGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+LTYN +I GL KE +   A +L   + K  + P+  T   L+ G       E AF++
Sbjct: 645 PDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRV 703

Query: 461 YKSMIRS-GCRPNKHIFEMLM---------------------STFCQNEDF--------- 489
            K  +   G   +   +E LM                     +T C+++           
Sbjct: 704 AKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLC 763

Query: 490 -----DRAAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
                  A  V L++ +  C+ P     + L  GL      E+A  LF KM+  G  P  
Sbjct: 764 KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823

Query: 544 F 544
           F
Sbjct: 824 F 824



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 161/367 (43%), Gaps = 35/367 (9%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A   + +M   G  P +++ +  + +L     ++  +G  +EM    + PN+YT  + 
Sbjct: 209 REALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTIC 268

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +    + G I+ A  + K M+  G  P V TY  LI   CN G L+ A +    M+ +  
Sbjct: 269 IRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSH 328

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+ +T+ TL+  F   G L      +SEM+A    P+VVT+  LI+   +VG  +    
Sbjct: 329 KPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFG 388

Query: 390 LYEEMLRNGIKVDILTYNALILGLC----------------------------------- 414
             + M + G+  ++ TYN LI GL                                    
Sbjct: 389 TLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYG 448

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G++ KA    + +  N +VPN    +A +     +   E A + +  + + G  P+  
Sbjct: 449 KSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAI 508

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +LM  + +    D A ++L EM E    P+ +I++ L   L+   + + A K+F++M
Sbjct: 509 TYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRM 568

Query: 535 EIRGLLP 541
           +   L P
Sbjct: 569 KEMKLAP 575



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 147/303 (48%)

Query: 212  ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
            A   F +M++ G  P + + N FL +L  S ++      Y+EM      PN  T N+V+ 
Sbjct: 807  AWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIF 866

Query: 272  AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
               K   +++A++++ ++ S  F P+  TY  LI G    G L  A +F   M   G  P
Sbjct: 867  GLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMP 926

Query: 332  NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
            N   +N L+ GF K+G +  A  +F  M    + P++ +Y+ +++    VG  +     +
Sbjct: 927  NCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYF 986

Query: 392  EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EE+  +G+  D++ YN +I GL +  + ++A  L  ++    + P+  TY+ALI    + 
Sbjct: 987  EELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIA 1046

Query: 452  KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               E A ++Y+ +   G  PN   +  L+     + + DRA  V  +M+     P++   
Sbjct: 1047 GMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTF 1106

Query: 512  SEL 514
            ++L
Sbjct: 1107 AQL 1109



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 153/331 (46%), Gaps = 7/331 (2%)

Query: 214  DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
            +T C+  D   +P++    KFL      + VD    F K  +   I+P++   N ++   
Sbjct: 746  NTICE-DDSVLIPLV----KFLCK--HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGL 798

Query: 274  CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
             K  + E A  +F  M++ G  P V TYN  +      G +         M   G +PN 
Sbjct: 799  LKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNT 858

Query: 334  ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            IT N +IFG  K   L +A  ++ ++ + + SP   TY  LI+G  ++G  E     +EE
Sbjct: 859  ITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEE 918

Query: 394  MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            ML  G   +   YN L+ G  K+G  + A  L + + K  + P+  +YS ++   C+   
Sbjct: 919  MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978

Query: 454  SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             + A   ++ +  SG  P+   + ++++   +++  + A  +  EM  + + PD    + 
Sbjct: 979  VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNA 1038

Query: 514  LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            L   L   G  E A K++ +++++GL P  F
Sbjct: 1039 LILNLGIAGMVEEAGKMYEELQLKGLEPNVF 1069



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 125/293 (42%), Gaps = 6/293 (2%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           ++MR+     N Y+   ++H   K G    A++V++ M S G  PS+ TY+ L+     +
Sbjct: 181 EKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKR 240

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             +   M     ME  G++PN+ TF   I    + GK+ EA  I   M      P+VVTY
Sbjct: 241 RDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTY 300

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             LI+     G       L+ +M  +  K D +TY  L+      G          +++ 
Sbjct: 301 TVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA 360

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +  +P+  T++ LI   C     + AF     M + G  PN H +  L+    +    D 
Sbjct: 361 DGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDE 420

Query: 492 AAEVLLEMLE---KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A E+   M     +  A   I+  + Y      GK   A+K F KM+  G++P
Sbjct: 421 ALELFNSMESLGLETTAYTYILFIDYYGKSGESGK---AIKTFEKMKTNGIVP 470



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 120/284 (42%)

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
           R+     T N V+        +E  V VF  M+      S+ TY T+      +G L  A
Sbjct: 117 RVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREA 176

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                 M K G   N  ++  LI    K G   EA +++  M +  + P++ TY+ L+  
Sbjct: 177 PVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVA 236

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
            G+  + E    L +EM   G++ +I T+   I  L + GK  +A  ++K +D     P+
Sbjct: 237 LGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPD 296

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY+ LI   C       A +L+  M  S  +P++  +  L+  F  + D D   E   
Sbjct: 297 VVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWS 356

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EM      PD +  + L   L   GK + A      M+ +G+ P
Sbjct: 357 EMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%), Gaps = 20/260 (7%)

Query: 134  KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLP---SKLFDSILYSYRM-- 188
            KP+++T   H+IV+  L K+     +  +   ++  D    P     L D +L   R+  
Sbjct: 855  KPNTIT---HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEE 911

Query: 189  ------------CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
                        C  +  ++++L   +  +     A + F +M   G  P ++S +  + 
Sbjct: 912  AKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVD 971

Query: 237  SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
             L    +VD AL +++E++ + + P++   N++++   +   +E A+ +F  M + G  P
Sbjct: 972  CLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITP 1031

Query: 297  SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
             + TYN LI      G++  A K    ++  G++PNV T+N LI G    G    A  ++
Sbjct: 1032 DLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVY 1091

Query: 357  SEMKATNVSPNVVTYNTLIN 376
             +M      PN  T+  L N
Sbjct: 1092 KKMMVGGCRPNTGTFAQLPN 1111


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 188/458 (41%), Gaps = 81/458 (17%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +LRG+  S+  +   KL   +      C     +++ L   Y+  K F  A     +M  
Sbjct: 48  LLRGLCRSNQLEKARKLLGRM--KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK 105

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
              LP + +    +  L  +ER   A+    EMR    SPN+YT N+++   C+   ++ 
Sbjct: 106 NHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDE 165

Query: 282 AVEVFKNMESMGFIPSVTTYN--------------------------------TLISGHC 309
           A ++ + M   G+ P V TYN                                T+I+G C
Sbjct: 166 AKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLC 225

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G L  A +  + M   G  P+V+T+++LI GFCK G++  A  +   M      PN+V
Sbjct: 226 KSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMV 285

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            YN+L+    ++G+      +  EM R G   D+++YNA I GLCK  + KKA  +   +
Sbjct: 286 AYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRM 345

Query: 430 DKNSLVPNASTYSALIT------------------------------------------- 446
            +    PNAS+YS LI                                            
Sbjct: 346 VERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNV 405

Query: 447 ---GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
                C R+  ++A Q++K M+   C  N   + +L+   C ++    A  +LL M+++ 
Sbjct: 406 MLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEG 464

Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             PD +    L   +  CGK   A++LF +    G +P
Sbjct: 465 FIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVP 502



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L  L    R D A   ++EM      P+ +T  +++   C+   +E+A ++   M+ 
Sbjct: 11  NKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKE 70

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           MG +P    YN LISG+        A KF   M KN   P V+T+  ++ G CK  +  +
Sbjct: 71  MGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRD 130

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++  EM+    SPN+ TYN ++ G  +    +    + EEM   G   D++TYN+ I 
Sbjct: 131 AVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIK 190

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLCK  +  +A    K L +  + P+  +Y+ +I G C   + + A ++   M   GC P
Sbjct: 191 GLCKCDRVDEAR---KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   +  L+  FC+  + +RA  +L  ML+    P+ +  + L   LH  G    A  + 
Sbjct: 248 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 307

Query: 532 RKMEIRGLLP 541
            +ME RG  P
Sbjct: 308 VEMERRGFTP 317



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/407 (24%), Positives = 175/407 (42%), Gaps = 49/407 (12%)

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           D  S +F  ++   + C      F +L +      +   A     +M++ G +P     N
Sbjct: 24  DKASAVFQEMID--KSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYN 81

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +S    ++    A  F  EM +N   P V T   ++   CK      AV++   M   
Sbjct: 82  ALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDK 141

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF----------- 341
           G  P++ TYN ++ G C +  L  A K    M   G  P+V+T+N+ I            
Sbjct: 142 GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA 201

Query: 342 ---------------------GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
                                G CK G L  A+R+   M     +P+VVTY++LI+G+ +
Sbjct: 202 RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCK 261

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  E    L + ML+ G + +++ YN+L+  L + G   KA  ++ ++++    P+  +
Sbjct: 262 GGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM----------LMSTFCQNEDFD 490
           Y+A I G C  +  ++A  ++  M+  GC PN   + M          L+   C+   FD
Sbjct: 322 YNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFD 381

Query: 491 RAAEVLLEML-EKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
            A  +  ++L EK   PD    + +     HC + ++  A+++ ++M
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDS--HCKRRQIDKALQIHKQM 426



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 186/426 (43%), Gaps = 50/426 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  ++      KL D +    + C  +   ++++ +     +K   A     +M 
Sbjct: 117 NIVDGLCKAERTRDAVKLLDEM--RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G+ P + + N F+  L   +RVD A  F   + R  ++P+V +   V++  CK G ++
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLD 231

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +  +M + G  P V TY++LI G C  G +  AM   + M K G +PN++ +N+L+
Sbjct: 232 SASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLL 291

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-- 398
               + G + +A  +  EM+    +P+VV+YN  I+G  +    +   ++++ M+  G  
Sbjct: 292 GALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCT 351

Query: 399 --------IKVDILTYNALILGLCKEGKTKKAAYLV-KDLDKNSLVP------------- 436
                   + VDIL Y  L+ GLCK G+  +A  L  K LD+    P             
Sbjct: 352 PNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHC 411

Query: 437 ---------------------NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
                                N  T++ L+ G CV      A  +  +M+  G  P+   
Sbjct: 412 KRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVT 471

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+   C+      A E+  E ++    PD +  S L +GL H    E A  LF K+ 
Sbjct: 472 YGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLV 531

Query: 536 IRGLLP 541
            R  +P
Sbjct: 532 ERRWVP 537



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 128/280 (45%), Gaps = 3/280 (1%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV+T N ++    +    ++A  VF+ M      P   T+  L+ G C    L  A K  
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M++ G  P+   +N LI G+ K     +A +  +EM   +  P VVTY  +++G  + 
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
             +     L +EM   G   +I TYN ++ GLC+E K  +A  +++++      P+  TY
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++ I G C     +R  +  K + R    P+   +  +++  C++ D D A+ +L  M  
Sbjct: 186 NSFIKGLC---KCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   PD +  S L  G    G+ E AM L   M   G  P
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRP 282



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 14/333 (4%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G+  S   D  S++ D +  S R C    + +  L   +    +   A     
Sbjct: 216 SYTTVINGLCKSGDLDSASRMLDHM--SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 273

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M   G  P + + N  L +L     +  A     EM R   +P+V + N  +   CK  
Sbjct: 274 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 333

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLI----------SGHCNKGLLSLAMK-FKNLMEK 326
            +++A  VF  M   G  P+ ++Y+ LI           G C  G    A   F  ++++
Sbjct: 334 RVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 393

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
              +P+V  +N ++   CK+ ++ +A +I  +M   N   NVVT+N L++G         
Sbjct: 394 KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSD 452

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             ++   M+  G   D +TY  L+  +CK GK+  A  L ++  K   VP+  TYSALIT
Sbjct: 453 AETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALIT 512

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           G      +E A+ L+  ++     P+     +L
Sbjct: 513 GLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 95/209 (45%)

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G + NV T+N L+    ++ +  +A+ +F EM   +  P+  T+  L+ G  +    E  
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L   M   G   D   YNALI G  K     +A   + ++ KN  +P   TY+ ++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C  + +  A +L   M   GC PN + + +++   C+    D A ++L EM  +   PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +  +    GL  C + + A K   +M +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPV 210



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 76/144 (52%)

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G + ++ TYN L+L L +E +  KA+ + +++   S  P+A T++ L+ G C     E+A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L   M   GC P+  I+  L+S + + +DF +A + L EM++    P  +  + +  G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L    +   A+KL  +M  +G  P
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSP 145


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 176/318 (55%), Gaps = 12/318 (3%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           +CN  LS  + + RV+ A  F++   +N   P+  + N +M+ F K G +++A+ +F  M
Sbjct: 104 TCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEM 163

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGI-QPNVITFNTLIFGFCKKG 347
           +  G I  + ++N ++ G C+ G +S+A + FK++   +GI  PN+I++  +I G CK  
Sbjct: 164 KDSG-IAVLRSHNIVLRGLCSGGKISMAWEVFKDM---SGIFSPNLISYTIMIDGLCKSR 219

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K+ +A  +F +M    + P+VVTY  LI+G G+    +    L+EE    G    ++TYN
Sbjct: 220 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 279

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            +I GLCK G+ + A  L  D+ +   L P+  TYSALI G  +    E+A++LY+ M+ 
Sbjct: 280 TMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD 339

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM-LEKCMAPDSIILSELYSGLHHCGKDE 525
           +GC P+   +  L+   C++   D+A E+  +M +     P+ I  + L      C  D 
Sbjct: 340 TGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLID--RFCKVDR 397

Query: 526 L--AMKLFRKMEIRGLLP 541
           L  A+KL ++ME R LLP
Sbjct: 398 LGDAVKLAKEMEGRSLLP 415



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/321 (27%), Positives = 168/321 (52%), Gaps = 3/321 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P + S    +  L  S +VD A+  +K+M    I P+V T   ++    K   ++ A 
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAY 260

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFG 342
           ++F+   + G  P+V TYNT+I G C  G +  A+  + +++ +  ++P++ T++ LI G
Sbjct: 261 DLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALING 320

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM-LRNGIKV 401
                +  +A  ++ EM  T  SP+VVTYNTL++G  + G  +    ++ +M + N    
Sbjct: 321 LNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDP 380

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++TY  LI   CK  +   A  L K+++  SL+P+A T++ +I   C     + A +L+
Sbjct: 381 NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF 440

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           +S+ ++ C+P+  +F  +++ +C+    D A ++   ML+   AP     + L +G    
Sbjct: 441 ESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRT 499

Query: 522 GKDELAMKLFRKMEIRGLLPK 542
           G+   A+ ++ +M   G  P+
Sbjct: 500 GRYSDALIMYHEMIEMGFPPE 520



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 164/348 (47%), Gaps = 21/348 (6%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           S  L +++I++  L K+RK   + ++ + ++D   +       D + Y            
Sbjct: 202 SPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYP------DVVTYG----------- 244

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-R 255
             L      +++ + A D F + R  G  P + + N  +  L    R++ AL  Y +M R
Sbjct: 245 -ALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVR 303

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P+++T + +++        E+A E+++ M   G  P V TYNTL+ G C  G   
Sbjct: 304 EPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCED 363

Query: 316 LAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            AM+ F+ +   N   PNVIT+  LI  FCK  +L +A ++  EM+  ++ P+ VT+ T+
Sbjct: 364 KAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTV 423

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I    +    +    L+E + +   K D + +N ++ G CK  +   A  L   +  +  
Sbjct: 424 IQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGC 482

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            P  +TY+AL+TG C       A  +Y  MI  G  P +H+ E++  T
Sbjct: 483 APTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELVDRT 530



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 2/203 (0%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N  T N L+  + K  ++ +A+  F         P+ V+YNTL+NG+ + G+ +   +L+
Sbjct: 101 NRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALF 160

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM  +GI V + ++N ++ GLC  GK   A  + KD+      PN  +Y+ +I G C  
Sbjct: 161 GEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDM-SGIFSPNLISYTIMIDGLCKS 218

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           +  ++A  L+K M+     P+   +  L+    +      A ++  E   K   P  +  
Sbjct: 219 RKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTY 278

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
           + +  GL  CG+ E A+ L+  M
Sbjct: 279 NTMIDGLCKCGRIENALTLYDDM 301



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 4/183 (2%)

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
           K +  + N  T N L++ Y +    E     ++  ++N  + D ++YN L+ G  K G  
Sbjct: 94  KQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDV 153

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC-RPNKHIFEM 478
           KKA  L  ++ K+S +    +++ ++ G C       A++++K M  SG   PN   + +
Sbjct: 154 KKALALFGEM-KDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDM--SGIFSPNLISYTI 210

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++   C++   D+A  +  +M++K + PD +    L  GL    + + A  LF +   +G
Sbjct: 211 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 270

Query: 539 LLP 541
             P
Sbjct: 271 CHP 273


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           +LL ++     +  +    F  +   G  P   + NK + + + +  +D+AL   + M R
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 257 NRISP--NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +  +P  + ++ N+V+    + G    A++VF  M  MG  P+  TYNT+I GH   G L
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDL 245

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
               + ++ M  +G +PNV+T+N L+ G C+ G++ E   +  EM + ++ P+  TY+ L
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
            +G  + G S+   SL+ E L+ G+ +   T + L+ GLCK+GK  KA  + + L    L
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP    Y+ LI G C  ++   AF +++ M     RP+   +  L++  C+ E   +A +
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +++EM +  + P     + L       G+ E    +   M+ +G+
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 168/354 (47%), Gaps = 3/354 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L        K   A   F  +   G +P     N  ++       +  A   +++M+  
Sbjct: 339 ILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+  T N +++  CKL ++ +A ++   ME  G  PSV T+NTLI  +   G L   
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               + M++ GI+ +VI+F +++  FCK GK+ EA  I  +M   +V+PN   YN++I+ 
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + G++E    L E+M  +G+   I+TYN L+ GLC+  +  +A  L+  L    L P+
Sbjct: 519 YIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             +Y+ +I+  C + ++++A +L + M + G RP       L+S             +  
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQ 638

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
           +ML K + P S I   +      C  D     L ++M  +G+    FD  +  N
Sbjct: 639 QMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGI---AFDDTKRSN 689



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 165/324 (50%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M  +  LP   + +     L  +      L  + E  +  +    YT +++++  CK G
Sbjct: 289 EMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDG 348

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A +VF+ +   G +P+   YNTLI+G+C    L  A      M+   I+P+ IT+N
Sbjct: 349 KVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI G CK   + +A  +  EM+ + V P+V T+NTLI+ YG  G  E   ++  +M + 
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIK D++++ +++   CK GK  +A  ++ D+    + PNA  Y+++I       ++E+A
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             L + M  SG   +   + +L+   C++   D A E++  +  + + PD +  + + S 
Sbjct: 529 LLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
             + G  + A++L ++M   G+ P
Sbjct: 589 CCNKGDTDKALELLQEMNKYGIRP 612



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 166/369 (44%), Gaps = 9/369 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        K  +A   F +M D G  P   + N  +   +    ++       +M 
Sbjct: 197 YNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQML 256

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +   PNV T N+++   C+ G ++    +   M S   +P   TY+ L  G    G   
Sbjct: 257 HDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQ 316

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +       K G+     T + L+ G CK GK+ +A ++F  +  T + P  V YNTLI
Sbjct: 317 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLI 376

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY QV +      ++E+M    I+ D +TYNALI GLCK     KA  LV +++K+ + 
Sbjct: 377 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 436

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI         E+ F +   M + G + +   F  ++  FC+N     A  +
Sbjct: 437 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 496

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLPKGFDK 546
           L +M+ K +AP++ + + +       G  E A+ L  KM+  G         LL KG  +
Sbjct: 497 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCR 556

Query: 547 LRTINCAPE 555
              I+ A E
Sbjct: 557 SSQIDEAEE 565



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 153/330 (46%), Gaps = 2/330 (0%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           D  C       LP + SCN  L SLL   R       +  +      P+ +  N V+ A 
Sbjct: 108 DGACAGEVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQAC 167

Query: 274 CKLGIIERAVEVFKNM-ESMGFIP-SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
              G ++ A+ + + M  S G  P    +YN +I+G    G  S A+K  + M   G+ P
Sbjct: 168 VAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAP 227

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N IT+NT+I G  K G L    R+  +M      PNVVTYN L++G  + G  +   +L 
Sbjct: 228 NRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALM 287

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM  + +  D  TY+ L  GL + G+++    L  +  K  ++  A T S L+ G C  
Sbjct: 288 DEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKD 347

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
               +A Q+++ ++ +G  P   I+  L++ +CQ  D   A  +  +M  + + PD I  
Sbjct: 348 GKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITY 407

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +GL        A  L  +ME  G+ P
Sbjct: 408 NALINGLCKLEMVTKAEDLVMEMEKSGVDP 437



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 127/275 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L       +    A D   +M   G  P +E+ N  + +   + +++       +
Sbjct: 405 ITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSD 464

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M++  I  +V +   V+ AFCK G I  AV +  +M      P+   YN++I  +   G 
Sbjct: 465 MQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGD 524

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A+     M+ +G+  +++T+N L+ G C+  ++ EA  +   ++   + P+VV+YNT
Sbjct: 525 TEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 584

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+     G+++    L +EM + GI+  + T + L+  L   G+      L + +   +
Sbjct: 585 IISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKN 644

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           + P++S Y  ++      +N  +   L K M   G
Sbjct: 645 VEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679



 Score =  101 bits (252), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 101/212 (47%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S  + F  + K +    K   A      M      P  +  N  + + ++S   + AL  
Sbjct: 472 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLL 531

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            ++M+ + +S ++ T N+++   C+   I+ A E+   + + G  P V +YNT+IS  CN
Sbjct: 532 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 591

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG    A++    M K GI+P + T +TL+      G++H+   ++ +M   NV P+   
Sbjct: 592 KGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 651

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           Y  +++ Y +  N    ASL +EM   GI  D
Sbjct: 652 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/246 (21%), Positives = 106/246 (43%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D S   F+ L   Y    +          M+  G    + S    + +   + ++  A+ 
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M    ++PN    N ++ A+ + G  E+A+ + + M++ G   S+ TYN L+ G C
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A +    +   G++P+V+++NT+I   C KG   +A  +  EM    + P + 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T +TL++     G       LY++ML   ++     Y  ++    +     K A L K++
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 430 DKNSLV 435
            +  + 
Sbjct: 676 SEKGIA 681



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/216 (20%), Positives = 81/216 (37%), Gaps = 37/216 (17%)

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           P++ + N L+      G+  +    F  + A    P+   +N ++      G+ ++  ++
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 391 YEEMLRN--GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
              M R+      D  +YN +I GL + GK   A  +  ++    + PN  TY+ +I G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               + E  F+L   M+  G +PN   + +L+S                           
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLS--------------------------- 272

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
                   GL   G+ +    L  +M    +LP GF
Sbjct: 273 --------GLCRTGRMDETRALMDEMASHSMLPDGF 300


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 173/361 (47%), Gaps = 35/361 (9%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           NK L SL++ +R   A+  YK+M  + + P+ +TLN++++ FC  G +  A      +  
Sbjct: 62  NKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILK 121

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKN----------------------------- 322
           +G+ P+  T NTL+ G C +G +  A++F +                             
Sbjct: 122 LGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRA 181

Query: 323 ------LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                  +E+  I+PNV+ ++ +I   CK   + EA  +++EM    +SP+VVTY+ L++
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  VG       L  EM+   I  DI TY  L+  LCKEGK K+A  ++  + K  +  
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +   YS L+ G C+      A +++ +M + G  P+ H + ++++  C+ +  D A  + 
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPEN 556
            E+ +K M PD++  + L   L   G+      LF +M  RG  P        I+   +N
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 557 G 557
           G
Sbjct: 422 G 422



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 150/292 (51%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   + + R  I PNV   +M++   CK  +++ A +++  M   G  P V TY+ L+S
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVS 241

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L+ A+   N M    I P++ T+  L+   CK+GK+ EA  + + M    V+ 
Sbjct: 242 GFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNL 301

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +VV Y+TL++GY  V        ++  M + G+  D+  Y+ +I GLCK  +  +A  L 
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLF 361

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ + ++VP+  TY++LI   C        + L+  M+  G  P+   +  L+   C+N
Sbjct: 362 EEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKN 421

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              DRA  +  +M ++ + P+    + L  GL   G+ + A++ F+ +  +G
Sbjct: 422 GHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKG 473



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 158/329 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D + +M   G  P + + +  +S      +++ A+    EM    I+P++YT  +++ 
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           A CK G ++ A  V   M        V  Y+TL+ G+C    ++ A +    M + G+ P
Sbjct: 277 ALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTP 336

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V  ++ +I G CK  ++ EA  +F E+   N+ P+ VTY +LI+   + G       L+
Sbjct: 337 DVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLF 396

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EML  G   D++TYN LI  LCK G   +A  L   +   ++ PN  T++ L+ G C  
Sbjct: 397 DEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKV 456

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + A + ++ ++  G   N   + ++++  C+    D A  +   M +     D++  
Sbjct: 457 GRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTF 516

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +        +++ A KL R+M  RGLL
Sbjct: 517 EIMIRAFFDKDENDKAEKLVREMIARGLL 545



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 161/349 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + + +L        + R A     ++  +   P +   +  +  L     VD A   Y
Sbjct: 162 SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLY 221

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    ISP+V T ++++  FC +G + RA+++   M      P + TY  L+   C +
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A     +M K  +  +V+ ++TL+ G+C   +++ A R+F  M    V+P+V  Y
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           + +ING  ++   +   +L+EE+ +  +  D +TY +LI  LCK G+      L  ++  
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               P+  TY+ LI   C   + +RA  L+  M     RPN + F +L+   C+      
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKN 461

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           A E   ++L K    +    + + +GL   G  + A+ L  +ME  G +
Sbjct: 462 ALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCI 510



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 161/349 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +++   + H  +   A     ++   G+ P   + N  +  L    +V  AL F+ ++ 
Sbjct: 96  LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 +  +  ++++  CK+G    A+ + + +E     P+V  Y+ +I   C   L+ 
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M   GI P+V+T++ L+ GFC  G+L+ A  + +EM   N++P++ TY  L+
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   + G  +   ++   M++  + +D++ Y+ L+ G C   +   A  +   + +  + 
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVT 335

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   YS +I G C  K  + A  L++ + +    P+   +  L+   C++       ++
Sbjct: 336 PDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDL 395

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             EML++   PD I  + L   L   G  + A+ LF KM+ + + P  +
Sbjct: 396 FDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVY 444



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 145/303 (47%), Gaps = 4/303 (1%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           +   D A+  +  M     +P+ +  N ++ +   +     A+ ++K ME     P   T
Sbjct: 36  THNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
            N +I+  C+ G + LA    + + K G QPN IT NTL+ G C +GK+ EA R   ++ 
Sbjct: 96  LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           A     + ++Y  LING  ++G +     L   + R  I+ +++ Y+ +I  LCK+    
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A  L  ++    + P+  TYS L++G C+     RA  L   M+     P+ + + +L+
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
              C+      A  VL  M++ C+  D ++ S L  G  +C  +E+  A ++F  M   G
Sbjct: 276 DALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDG--YCLVNEVNNAKRVFYTMTQMG 333

Query: 539 LLP 541
           + P
Sbjct: 334 VTP 336



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 131/294 (44%), Gaps = 18/294 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++  L K  K K +E++L  ++     +L     D ++YS             L  
Sbjct: 270 TYTILVDALCKEGKVKEAENVL-AVMVKACVNL-----DVVVYS------------TLMD 311

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    +  NA   F  M   G  P +   +  ++ L   +RVD AL  ++E+ +  + P
Sbjct: 312 GYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVP 371

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +  T   ++   CK G I    ++F  M   G  P V TYN LI   C  G L  A+   
Sbjct: 372 DTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALF 431

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           N M+   I+PNV TF  L+ G CK G+L  A   F ++       NV TY  +ING  + 
Sbjct: 432 NKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKE 491

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           G  +   +L   M  NG   D +T+  +I     + +  KA  LV+++    L+
Sbjct: 492 GLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545


>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Glycine max]
          Length = 492

 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 222/473 (46%), Gaps = 43/473 (9%)

Query: 80  DFVNIAYSH-------LIHSDWKKLTALST----HLTPFRVKHVLLKVQKDYVLSLEFFT 128
           D VNIA +        ++ SD + L+   T    H TP  V   L ++      +L FF 
Sbjct: 29  DAVNIAEASDATIAKLVLESDPRTLSEALTKPRIHWTPELVNKTLKRLWNHGPKALLFFK 88

Query: 129 WVQTHKPSSLTLETHSI-----VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
            +  H PS     THS       + I  + R F S+ +++                   +
Sbjct: 89  HLDRHLPSY----THSPSSFDHAVDIAARMRDFNSAWALV-----------------GRM 127

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
            S R+   SP    +L + YA   K   A  TF  M ++G    + S N  L  L  S R
Sbjct: 128 RSLRL-GPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNR 186

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V+ A    + ++ +R  P+  + N++ + +C       A+ V K M   G  P++ TYNT
Sbjct: 187 VETAHDLLRTLK-SRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNT 245

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++ G+     +  A +F   M+K   + +V+++ T+I GF + G++ +A R+F EM    
Sbjct: 246 MLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEG 305

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI-KVDILTYNALILGLCKEGKTKKA 422
           V+PNV TYN LI  + +  + +   +++EEM+R G+   +++T+N +I GLC  G  ++A
Sbjct: 306 VAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERA 365

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
              ++ + ++ L  +  TY+ +I   C     E+  +++  M    C PN   + +L+S 
Sbjct: 366 LGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISA 425

Query: 483 FC---QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
                ++ED   A ++L+EM+E+   P     + + +GL   G  + A  + R
Sbjct: 426 MFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITGNQDFAKDILR 478



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 183/379 (48%), Gaps = 8/379 (2%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K  D  L SY     SP  FD      A  + F +A     +MR     P  ++      
Sbjct: 88  KHLDRHLPSY---THSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAE 144

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                 +   A+  +  M  + +  ++++ N ++   CK   +E A ++ + ++S  F P
Sbjct: 145 RYASIGKPHRAVRTFLSMHEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRP 203

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
              +YN L +G+C K    +A++    M + GI+P ++T+NT++ G+ +  ++ EA   +
Sbjct: 204 DTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFY 263

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EMK      +VV+Y T+I+G+G+ G  +    +++EM++ G+  ++ TYNALI   CK+
Sbjct: 264 LEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKK 323

Query: 417 GKTKKAAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
              + A  + +++ +  +  PN  T++ +I G C   + ERA    + M   G R +   
Sbjct: 324 DSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQT 383

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAMKLFR 532
           + +++  FC   + ++  EV  +M +    P+    + L S +    K E   +A KL  
Sbjct: 384 YNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLM 443

Query: 533 KMEIRGLLPKGFDKLRTIN 551
           +M  RG LP+ F   R +N
Sbjct: 444 EMVERGFLPRKFTFNRVLN 462



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 4/216 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+   + +  +   +    + + A   F +M   G  P + + N  +      + V  
Sbjct: 269 RKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQN 328

Query: 247 ALGFYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           A+  ++EM R  + SPNV T N+V+   C +G +ERA+   + M   G   SV TYN +I
Sbjct: 329 AVAVFEEMVREGVCSPNVVTFNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVI 388

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI---FGFCKKGKLHEANRIFSEMKAT 362
              C+ G +   ++    M      PN+ T+N LI   F   K   L  A ++  EM   
Sbjct: 389 RYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVER 448

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
              P   T+N ++NG    GN +    +     R G
Sbjct: 449 GFLPRKFTFNRVLNGLVITGNQDFAKDILRMQSRCG 484


>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
          Length = 484

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 162/326 (49%), Gaps = 2/326 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L +      K  +A + F +M   G  P + + N  +S +  +  ++ A      M 
Sbjct: 117 FNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMA 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  I+P+VYT    +   CK G I+ A+E+F+ M   G  P+     TLI  HC +G ++
Sbjct: 177 KAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVT 236

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             ++ +  M   G++ +++ +N L+ GFC+   +  AN I  EM+   + P+ VTY TLI
Sbjct: 237 AGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLI 296

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  +    + +EM   G+ +D +TY ALI GL K G++  A  ++ ++ +  L 
Sbjct: 297 DGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQ 356

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ +TY+ +I   C   + +  F+  K M   G  P    + ++M+ FC       A  +
Sbjct: 357 PDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADML 416

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC 521
           L  ML   + P+ I  + L  G  HC
Sbjct: 417 LNAMLNIGVCPNDITYNILLDG--HC 440



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 172/384 (44%), Gaps = 34/384 (8%)

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           D P +L   ++ +    D +PLV   + K YA                D G LP  + C+
Sbjct: 28  DSPPRLLPLLVSAASTDDPAPLV-SAVAKVYA----------------DEGLLP--DGCS 68

Query: 233 KFLSSLLDSERVDI---------------ALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
             L +L    RV +               A  FY  +    + P     NM+M    + G
Sbjct: 69  LLLLALRRGIRVPMPAWSDLMNRLPSVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSG 128

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +  A  VF  M   G  P+V T+NTL+SG C    L+ A   + LM K GI P+V T+ 
Sbjct: 129 KLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYG 188

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
             I G CK G++ +A  +F EM    ++PN V   TLI+ + + G+   G  L  EM   
Sbjct: 189 AFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATR 248

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+K D++ YNAL+ G C+    K A  +V+++ K+ L P+  TY+ LI G C     + A
Sbjct: 249 GVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTA 308

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            ++ + M   G   +   +  L+S   +      A  +L EM+E  + PD+   + +   
Sbjct: 309 MEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDA 368

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
               G  +   K  ++M+ +G  P
Sbjct: 369 FCKNGDVKTGFKHLKEMQNKGKNP 392



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 152/326 (46%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           +  + D G  P     N  +  ++ S ++  A   + EM R  + P V T N +M   CK
Sbjct: 102 YLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCK 161

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              +  A  +   M   G  P V TY   I G C  G +  AM+    M + G+ PN + 
Sbjct: 162 ASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVV 221

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
             TLI   CK+G +     +  EM    V  ++V YN L+NG+ +V + +    + EEM 
Sbjct: 222 LTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMR 281

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           ++G+K D +TY  LI G CKEG+   A  + +++    +  +  TY+ALI+G      S 
Sbjct: 282 KDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSV 341

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A ++   M+ +G +P+   + M++  FC+N D     + L EM  K   P  +  + + 
Sbjct: 342 DAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVM 401

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLP 541
           +G    G+ + A  L   M   G+ P
Sbjct: 402 NGFCSLGQMKNADMLLNAMLNIGVCP 427



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 171/388 (44%), Gaps = 12/388 (3%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN-----RKFKS 158
           L P     +LL +++   + +  ++ +    PS    E ++  LH+L        R+F  
Sbjct: 62  LLPDGCSLLLLALRRGIRVPMPAWSDLMNRLPS--VPEAYAFYLHLLDAGVPPEARQFNM 119

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
              ++R ++ S        +FD +L   R    + + F+ L           NA      
Sbjct: 120 ---LMRDMIRSGKLASARNVFDEMLR--RGVQPTVVTFNTLMSGMCKASDLNNANALRGL 174

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M   G  P + +   F+  L  + R+  A+  ++EM    ++PN   L  ++ A CK G 
Sbjct: 175 MAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGD 234

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +   +E+   M + G    +  YN L++G C    +  A      M K+G++P+ +T+ T
Sbjct: 235 VTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTT 294

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G+L  A  +  EM    V+ + VTY  LI+G  + G S     +  EM+  G
Sbjct: 295 LIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAG 354

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++ D  TY  +I   CK G  K     +K++      P   TY+ ++ G C     + A 
Sbjct: 355 LQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNAD 414

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            L  +M+  G  PN   + +L+   C++
Sbjct: 415 MLLNAMLNIGVCPNDITYNILLDGHCKH 442



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 93/220 (42%), Gaps = 9/220 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +   +  + A D   +MR  G  P   +    +        +D A+   +E
Sbjct: 255 VAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELDTAMEMKQE 314

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    ++ +  T   ++    K G    A  +   M   G  P  TTY  +I   C  G 
Sbjct: 315 MSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGD 374

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +    K    M+  G  P ++T+N ++ GFC  G++  A+ + + M    V PN +TYN 
Sbjct: 375 VKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNI 434

Query: 374 LING---YGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           L++G   +G+V ++E      E     G+  D   Y +LI
Sbjct: 435 LLDGHCKHGKVRDTE------ELKSAKGMVSDFGVYTSLI 468


>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
 gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
           mitochondrial-like [Cucumis sativus]
          Length = 502

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 212/451 (47%), Gaps = 22/451 (4%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L  L    TP  V  VL ++      +L+FF  ++ H   + +  +    + I  + R +
Sbjct: 69  LHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDY 128

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+  +++                 + + + R+  SS   F ++ + +    K   A   F
Sbjct: 129 KTVWALV-----------------ARMRARRIGPSSK-TFAIIAERFVAAGKPDRAIKVF 170

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             MR++G    + S N  L  L  S+RV++A     ++ R +   +V + N++ + +C +
Sbjct: 171 LSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLI 230

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
               +A+EV K M   G  P++TTYN L+ G+   G L  A +F   M++  ++ +V+T+
Sbjct: 231 KRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTY 290

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            T++ GF   G++  A ++F+EM    + P+  TYN +I    +  + E    ++EEM++
Sbjct: 291 TTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVK 350

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   ++ TYN +I GL   G   KA   ++ +  +   PN  TY+  I   C   + E+
Sbjct: 351 KGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEK 410

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFC---QNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
              +++ M   G  PN   + +L+S      ++ED   A ++LLEM+++   P     + 
Sbjct: 411 GLSMFEKM-GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNR 469

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           + +GL   G    A ++ R     G LP+ F
Sbjct: 470 VLNGLLLTGNQAFAKEILRLQSKCGRLPRQF 500



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 187/419 (44%), Gaps = 27/419 (6%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK------TYAHR-KK 208
            +S    LRG L         +L D +L          L F   FK      +YAH    
Sbjct: 58  LESDPKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQF---FKHLEYHPSYAHSASS 114

Query: 209 FRNATDTFCQMRDYGFL-------------PIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +A D   +MRDY  +             P  ++        + + + D A+  +  MR
Sbjct: 115 FDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMR 174

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +    ++++ N ++   CK   +E A      +    F   V +YN + +G C      
Sbjct: 175 EHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTP 234

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++    M + G+ P + T+N L+ G+ + G+L EA   F +MK   V  +VVTY T++
Sbjct: 235 KALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMV 294

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+G VG  +    ++ EM+  GI     TYNA+I  LCK+   + A  + +++ K   V
Sbjct: 295 HGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYV 354

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN +TY+ +I G     N ++A +  + M   GC PN   + + +  FC   D ++   +
Sbjct: 355 PNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSM 414

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAMKLFRKMEIRGLLPKGFDKLRTIN 551
             +M +  + P+    + L S +    K E   +A KL  +M  RG +P+ F   R +N
Sbjct: 415 FEKMGQGSL-PNLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTFNRVLN 472


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 173/344 (50%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           VF++L   YA ++K   A   F +MR +G  P +      +  L  S  VD A+ ++++M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               ++PN+     ++H  C     ++A E+   M   G   +   +N++I  HC +G +
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             + K  +LM + G++P++IT+NTLI G C  GK+ EA ++ + M +  V P++VTY TL
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           INGY +V   +   +L++EM+ +G+  +I+TYN ++ GL    +T  A  L   + K+  
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGT 617

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
               STY+ ++ G C    ++ A ++++++  +  +     F +++    +    D A +
Sbjct: 618 QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKD 677

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +        + PD    S +   L   G  E    LF  ME  G
Sbjct: 678 LFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENG 721



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R  G  P + S N  L+        D A   Y EM    I P+V T + ++ A CK   +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           ++A+EV   M   G +P   TYN+++ G+C+ G    A+     M  +G++PNV+T+++L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   CK G+  EA +IF  M    + P++ TY TL+ GY   G      +L + M+RNGI
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + D   +N LI    K+ K  +A  +   + ++ L PN   Y  +I   C   + + A  
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            ++ MI  G  PN  ++  L+   C  + +D+A E++LEML++ +  ++I  + +     
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDS-- 490

Query: 520 HC--GKDELAMKLFRKMEIRGLLP 541
           HC  G+   + KLF  M   G+ P
Sbjct: 491 HCKEGRVIESEKLFDLMVRIGVKP 514



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 165/330 (50%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    M   G +P   + N  L     S +   A+G  K+MR + + PNV T + +M+
Sbjct: 255 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMN 314

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G    A ++F +M   G  P + TY TL+ G+  KG L       +LM +NGIQP
Sbjct: 315 YLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQP 374

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   FN LI  + K+ K+ +A  +FS+M+   ++PNVV Y T+I+   + G+ +     +
Sbjct: 375 DHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYF 434

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M+  G+  +I+ Y +LI GLC   K  KA  L+ ++    +  N   ++++I   C  
Sbjct: 435 EQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKE 494

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                + +L+  M+R G +P+   +  L+   C     D A ++L  M+   + PD +  
Sbjct: 495 GRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTY 554

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             L +G     + + A+ LF++M   G+ P
Sbjct: 555 GTLINGYCRVSRMDDALALFKEMVSSGVSP 584



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 177/380 (46%), Gaps = 6/380 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FDS+  + R  +     +  L + YA +            M   G  P     N  + 
Sbjct: 327 KIFDSM--TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +    E+VD A+  + +MR++ ++PNV     V+   CK G ++ A+  F+ M   G  P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           ++  Y +LI G C       A +    M   GI  N I FN++I   CK+G++ E+ ++F
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    V P+++TYNTLI+G    G  +    L   M+  G+K DI+TY  LI G C+ 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
            +   A  L K++  + + PN  TY+ ++ G    + +  A +LY S+ +SG +     +
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
            +++   C+N   D A  +   +    +  ++   + +   L  CG+ + A  LF     
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 537 RGLLPKGFDKLRTINCAPEN 556
            GL+P     +RT +   EN
Sbjct: 685 NGLVP----DVRTYSLMAEN 700



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 14/332 (4%)

Query: 180 DSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIESCNKF 234
           D++LY  +M D   +P  +V+  L        K+  A +   +M D G  L  I     F
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI-----F 483

Query: 235 LSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            +S++DS     RV  +   +  M R  + P++ T N ++   C  G ++ A ++  +M 
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMV 543

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
           S+G  P + TY TLI+G+C    +  A+     M  +G+ PN+IT+N ++ G     +  
Sbjct: 544 SVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
            A  ++  +  +     + TYN +++G  +   ++    +++ +    ++++  T+N +I
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMI 663

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L K G+  +A  L      N LVP+  TYS +      + + E    L+ SM  +GC 
Sbjct: 664 GALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCS 723

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            +  +   ++    Q  D  RA   L  + EK
Sbjct: 724 ADSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 755



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 131/310 (42%), Gaps = 44/310 (14%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
           F + +RR R   ++Y LN  +    +      AV  +  M   G     P+V TY  LI 
Sbjct: 43  FDELLRRGR-GASIYGLNRALADVARHSPAA-AVSRYNRMARAGAGKVTPTVHTYAILIG 100

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
             C  G L L       + K G + + ITF  L+ G C   +  +A              
Sbjct: 101 CCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 160

Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                           NR         + ++ +     P+VV+YNT++NG+ + G+S+  
Sbjct: 161 PDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKA 220

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
            S Y EML  GI  D++TY+++I  LCK     KA  ++  + KN ++P+  TY++++ G
Sbjct: 221 YSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 280

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C     + A    K M   G  PN   +  LM+  C+N     A ++   M ++ + PD
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 508 SIILSELYSG 517
                 L  G
Sbjct: 341 IATYRTLLQG 350



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 145/324 (44%), Gaps = 23/324 (7%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
            ++ ++H L    K+  +E ++  +LD     L +  F+SI+ S+    R+ +S  L FD
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKL-FD 505

Query: 198 LLFK--------TY-------AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           L+ +        TY           K   AT     M   G  P I +    ++      
Sbjct: 506 LMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVS 565

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R+D AL  +KEM  + +SPN+ T N+++           A E++ ++   G    ++TYN
Sbjct: 566 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYN 625

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            ++ G C   L   A++ F+NL   + +Q    TFN +I    K G++ EA  +F+   A
Sbjct: 626 IILHGLCKNNLTDEALRMFQNLCLTD-LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             + P+V TY+ +     + G+ E    L+  M  NG   D    N+++  L + G   +
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITR 744

Query: 422 AAYLVKDLDKNSLVPNASTYSALI 445
           A   +  +D+      AST S L+
Sbjct: 745 AGTYLFMIDEKHFSLEASTASFLL 768



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 92/185 (49%), Gaps = 4/185 (2%)

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           A  V+P V TY  LI    + G  ++G +    +++ G +VD +T+  L+ GLC + +T 
Sbjct: 85  AGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTS 144

Query: 421 KAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGCRPNKHI-F 476
            A  +V + + +   +P+  +Y+ L+ G C    S+ A +L   M   R G  P   + +
Sbjct: 145 DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSY 204

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             +++ F +  D D+A     EML++ + PD +  S + + L      + AM++   M  
Sbjct: 205 NTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVK 264

Query: 537 RGLLP 541
            G++P
Sbjct: 265 NGVMP 269


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 174/353 (49%), Gaps = 8/353 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK--E 253
           F+ +   + H  +   A + F  M+  GF+P + S +  +  L   ++ D+  G+Y   E
Sbjct: 286 FNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGL--CKQGDVLTGYYMLVE 343

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M RN I+PN+ + + ++H  C+ G +E A E+FK ++  GF      Y+ ++ G C    
Sbjct: 344 MARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD 403

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L +     N M  +   P+   +++LI+ +C+  +L EA  +F  M +  + PNVVT   
Sbjct: 404 LEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTI 463

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++G+   G         +++ + G+   + TY  +I GLCK  K      +  D+ K  
Sbjct: 464 LVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRG 523

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            VP+   YS +I G     + + AF+LY  M+  G +PN   +  L++  C ++      
Sbjct: 524 YVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVM 583

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
            +   M+ + +APD I+ + L +   +C +  +  A+++FR+ME  GL    F
Sbjct: 584 TLFKHMIGEGLAPDRILYTSLIAC--YCKRSNMKAALEIFREMETEGLSADSF 634



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 167/337 (49%), Gaps = 14/337 (4%)

Query: 212 ATDTFCQMRDYGFLP-------IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           A + F +++D GF         ++  C + L        ++I    + +M  +   P+ Y
Sbjct: 372 AFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD-------LEICYDLWNDMVHHNFVPDAY 424

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             + +++A+C+   ++ A+EVF+ M S G  P+V T   L+ G  N+GL+  A  F + +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G+ P++ T+  +I G CK  K ++   IF++M      P+ V Y+ +I+G+ +  + 
Sbjct: 485 RQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    LY +M+  G K +I TY +LI GLC + K  +   L K +    L P+   Y++L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSL 604

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I   C R N + A ++++ M   G   +  ++  L+  F +    D A   + EM+ K +
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P  +  ++L  G    G ++ AM ++  M   G+ P
Sbjct: 665 TPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAP 701



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 165/351 (47%), Gaps = 4/351 (1%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P V+  + + +     F +A  T+ + +  G    ++ CN  L  L++  ++  A   + 
Sbjct: 143 PQVYATVIRVFVELSMFEDALVTYVEAKKVGVE--LQVCNFLLKRLVEGNQIMYARSLFD 200

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM--GFIPSVTTYNTLISGHCN 310
           +M+ +  SPNVY+ +++M  +     +     +    E    G  P+  TY T + G C+
Sbjct: 201 DMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCH 260

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              +  A  F  ++ + G   N   FN +I GFC  G++H+A  +F  MK     P+V +
Sbjct: 261 AKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHS 320

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ L++G  + G+   G  +  EM RNGI  ++++Y++L+ GLC+ G+ + A  L K L 
Sbjct: 321 YSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLK 380

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
                 +   YS ++ G C   + E  + L+  M+     P+ + +  L+  +C++    
Sbjct: 381 DQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLK 440

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A EV   M+   + P+ +  + L  G  + G    A     K+   G++P
Sbjct: 441 EALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVP 491



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 122/274 (44%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y   ++ + A + F  M   G  P + +C   +    +   +  A  F  ++R+  
Sbjct: 429 LIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFG 488

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P++ T  +++H  CK+        +F +M   G++P    Y+ +I G      L  A 
Sbjct: 489 VVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G +PN+ T+ +LI G C   KL E   +F  M    ++P+ + Y +LI  Y
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACY 608

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  N +    ++ EM   G+  D   Y  LI G  K      A   ++++    L P  
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            TY+ LI G     + ++A  +Y SM+++G  P+
Sbjct: 669 VTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 109/222 (49%), Gaps = 2/222 (0%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++R +G +P + +    +  L    + +   G + +M +    P+    ++++  F K  
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            ++ A  ++  M   G  P++ TY +LI+G C+   L   M     M   G+ P+ I + 
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY-EEMLR 396
           +LI  +CK+  +  A  IF EM+   +S +   Y  LI G+ +V   + GA L+ EEM+ 
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMD-GAQLFMEEMMN 661

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            G+   ++TY  LI+G  K G  KKA  +   + +  + P+A
Sbjct: 662 KGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDA 703



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 99/229 (43%), Gaps = 18/229 (7%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           +L T+ +++H L K  K      I   ++          + D++LYS        ++ D 
Sbjct: 492 SLCTYRVIIHGLCKVNKPNDMWGIFADMIKR------GYVPDTVLYS--------IIIDG 537

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
             K    ++ FR     + +M D G  P I +    ++ L   +++   +  +K M    
Sbjct: 538 FVKALDLQEAFR----LYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           ++P+      ++  +CK   ++ A+E+F+ ME+ G       Y  LI G      +  A 
Sbjct: 594 LAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            F   M   G+ P V+T+  LI G+ K G   +A  +++ M    ++P+
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 156/298 (52%), Gaps = 2/298 (0%)

Query: 246 IALGF--YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +A GF     M +  + P V TL  +++  C  G + +AV +  +ME M +   V TY  
Sbjct: 128 VAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGV 187

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+G C  G    A+++   ME+   +PNV+ ++T++ G CK G + EA  + SEM    
Sbjct: 188 LINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKG 247

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V PN+VTY  LI G    G  +   SL +EM++ G+++D+ T N L+   CKEGK  +A 
Sbjct: 248 VRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAK 307

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++  +      P+  TY++LI   C++     A +++  M+  GC P+  +F  L+  +
Sbjct: 308 SVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGW 367

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C++++ ++   +L EM +    PD +  + L  G    G+   A +LF  M   G +P
Sbjct: 368 CKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVP 425



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 192/452 (42%), Gaps = 53/452 (11%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           +L+ F  + + KP   +++  +++L ++ + + + ++ S+++ I  S   +         
Sbjct: 60  ALDLFQGMASMKPLP-SVKDFTLLLGVIVRLKHYTTAISLVKHIFSSLGIE--------- 109

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
                   +  +  +++       K           M   G  P + +    ++ L    
Sbjct: 110 --------ADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQG 161

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            V  A+G    M + R   +VYT  ++++  CK G    AVE  + ME   + P+V  Y+
Sbjct: 162 NVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYS 221

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG-------------------- 342
           T++ G C  GL+S A+   + M   G++PN++T+  LI G                    
Sbjct: 222 TIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKM 281

Query: 343 ---------------FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
                          FCK+GK+ +A  +   M  T   P+V TYN+LI+ Y         
Sbjct: 282 GMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEA 341

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++  M+  G   DI+ + +LI G CK+    K  +L++++ K   VP+  T++ LI G
Sbjct: 342 MRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGG 401

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C       A +L+ +M + G  PN     +++   C+      A  +   M +  +  +
Sbjct: 402 FCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLN 461

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +I S L  G+   GK   A +LF  +  +GL
Sbjct: 462 IVIYSILLDGMCSAGKLNAAWELFSSLPGKGL 493



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 147/301 (48%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P + +    +  L +  R         EM +  +  ++ TLN+++ AFCK G
Sbjct: 242 EMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEG 301

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +A  V   M   G  P V TYN+LI  +C +  ++ AM+  +LM   G  P+++ F 
Sbjct: 302 KVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFT 361

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +LI G+CK   +++   +  EM      P+VVT+ TLI G+ Q G       L+  M + 
Sbjct: 362 SLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKY 421

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G   ++ T   ++ GLCK     +A  L + ++K++L  N   YS L+ G C       A
Sbjct: 422 GQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAA 481

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           ++L+ S+   G + N + + +++   C+    D+A ++L+ M E    PD+   +    G
Sbjct: 482 WELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQG 541

Query: 518 L 518
           L
Sbjct: 542 L 542



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 144/330 (43%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M +  + P +   +  +  L     V  AL    EM    + PN+ T   ++ 
Sbjct: 201 AVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQ 260

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C  G  +    +   M  MG    + T N L+   C +G +  A      M   G  P
Sbjct: 261 GLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGP 320

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V T+N+LI  +C + K++EA R+F  M +    P++V + +LI+G+ +  N      L 
Sbjct: 321 DVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLL 380

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM + G   D++T+  LI G C+ G+   A  L  ++ K   VPN  T + ++ G C  
Sbjct: 381 EEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKG 440

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  L ++M +S    N  I+ +L+   C     + A E+   +  K +  +    
Sbjct: 441 NLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTY 500

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  GL   G  + A  L   ME  G LP
Sbjct: 501 TIMIKGLCKQGSLDKAEDLLINMEENGCLP 530



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 147/333 (44%), Gaps = 2/333 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G+ +   +     L D ++      D   L  ++L   +    K   A      M  
Sbjct: 258 LIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTL--NILVDAFCKEGKVMQAKSVIGFMIL 315

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + N  +       +++ A+  +  M      P++     ++H +CK   I +
Sbjct: 316 TGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINK 375

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            + + + M  MGF+P V T+ TLI G C  G    A +    M K G  PN+ T   ++ 
Sbjct: 376 VMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILD 435

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK   L EA  +   M+ +N+  N+V Y+ L++G    G       L+  +   G+++
Sbjct: 436 GLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQI 495

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           ++ TY  +I GLCK+G   KA  L+ ++++N  +P+  TY+  + G   +K   R+ +  
Sbjct: 496 NVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYL 555

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             M   G   +    E+ ++    NE   R  E
Sbjct: 556 TIMRDKGFSVDAATTEITINYLSTNEGDTRIRE 588



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 122/249 (48%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V+T N ++H +C    +  A+ VF  M S G +P +  + +LI G C    ++  M 
Sbjct: 319 GPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMH 378

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M K G  P+V+T+ TLI GFC+ G+   A  +F  M      PN+ T   +++G  
Sbjct: 379 LLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLC 438

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +        SL E M ++ + ++I+ Y+ L+ G+C  GK   A  L   L    L  N  
Sbjct: 439 KGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVY 498

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           TY+ +I G C + + ++A  L  +M  +GC P+   + + +      ++  R+ + L  M
Sbjct: 499 TYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIM 558

Query: 500 LEKCMAPDS 508
            +K  + D+
Sbjct: 559 RDKGFSVDA 567



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/279 (27%), Positives = 117/279 (41%), Gaps = 4/279 (1%)

Query: 270 MHAFCKLGI---IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-KNLME 325
           M   CK G    I+ A+++F+ M SM  +PSV  +  L+         + A+   K++  
Sbjct: 45  MRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFS 104

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             GI+ + IT N +I   C+   +     +   M    + P V+T   LING    GN  
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVA 164

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L + M +    +D+ TY  LI GLCK G T  A   ++ +++ +  PN   YS ++
Sbjct: 165 QAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIM 224

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
            G C       A  L   M   G RPN   +  L+   C    +     +L EM++  M 
Sbjct: 225 DGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMR 284

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
            D   L+ L       GK   A  +   M + G  P  F
Sbjct: 285 LDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVF 323


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 184/416 (44%), Gaps = 42/416 (10%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           LR +L  D  +   KL+  ++    + D+  + ++ +   Y  +     A   FC +R+ 
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDT--VTYNTMIMAYCKKGSLAIAHRYFCLLRES 208

Query: 223 GFLPIIESCNKFL-----------------------------------SSLLDSERVDIA 247
           G      +CN  L                                     L ++  V  A
Sbjct: 209 GMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREA 268

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L     M  +  S N++T  +++   CK G I  A  +   M   G +PSV TYN +I G
Sbjct: 269 LVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDG 328

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C  G +  A+  K LME+NG  P+  T+N+LI+G C  GKL EA  + +   A   +P 
Sbjct: 329 YCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPT 387

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V+T+  LINGY +    +    +   M+ +  K+D+  Y  LI  L K+ + K+A   + 
Sbjct: 388 VITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLN 447

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++  N L PN  TY+++I G C       A +++K M   GC PN   +  L+    Q++
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
              +A  ++ +M E  + P  I  + L  G   C K E   A +LF  ME  GL P
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQG--QCKKHEFDNAFRLFEMMEQNGLTP 561



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 168/343 (48%), Gaps = 4/343 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + LL K      +  +A     +M   G +P + + N  +     S R+  ALG    M 
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +N  +P+ +T N +++  C  G ++ A E+     + GF P+V T+  LI+G+C    + 
Sbjct: 347 QNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERID 405

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A++ K+ M  +  + ++  +  LI    KK +L EA    +EM A  ++PNVVTY ++I
Sbjct: 406 DALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSII 465

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +GY +VG       +++ M   G   +  TY +LI GL ++ K  KA  L+  + ++ + 
Sbjct: 466 DGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGIT 525

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P   TY+ LI GQC +   + AF+L++ M ++G  P++  + +L    C++    RA E 
Sbjct: 526 PGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS---GRAEEA 582

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
              ++ K +    +  + L  G    G  + A  L  KM   G
Sbjct: 583 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 154/314 (49%), Gaps = 32/314 (10%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM  N ++PNV T   ++  +CK+G++  A+EVFK ME  G  P+  TY +LI G     
Sbjct: 448 EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDK 507

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP-----N 367
            L  AM     M+++GI P VIT+ TLI G CKK +   A R+F  M+   ++P     N
Sbjct: 508 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 567

Query: 368 V---------------------------VTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           V                           VTY +L++G+ + GN++  A L E+M+  G K
Sbjct: 568 VLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+ TY+ L+  LCK+ K  +A  ++  +  + +  N   Y+ +I+        + A  L
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           +  MI SG +P+   + + +S++C+    + A  ++ EM    + PD +  +   +G  H
Sbjct: 688 FNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGH 747

Query: 521 CGKDELAMKLFRKM 534
            G  + A    ++M
Sbjct: 748 MGYIDRAFSTLKRM 761



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 192/431 (44%), Gaps = 6/431 (1%)

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-SDSFDLPSK 177
           D   +L FF  V        T  +H+ +L +L + R   + + ++  ++  S + +   +
Sbjct: 65  DPATALAFFECVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVRE 124

Query: 178 LFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
             D+I    R+       SP  ++L  ++             +  +   G LP   + N 
Sbjct: 125 AVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNT 184

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +      + IA  ++  +R + +  + YT N ++  +C+   + +A  +   M  MG
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
              +  +Y  LI G C    +  A+    +M  +G   N+ T+  LI G CK+G++H+A 
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM    V P+V TYN +I+GY + G  +    +   M +NG   D  TYN+LI GL
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  GK  +A  L+         P   T++ LI G C  +  + A ++  +MI S C+ + 
Sbjct: 365 CG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             + +L++   +      A E L EM    +AP+ +  + +  G    G    A+++F+ 
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKL 483

Query: 534 MEIRGLLPKGF 544
           ME  G  P  +
Sbjct: 484 MEHEGCHPNAW 494



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/365 (23%), Positives = 158/365 (43%), Gaps = 24/365 (6%)

Query: 138 LTLETHSIVLHILTKNRKFKSSE-------------------SILRGILDSDSFDLPSKL 178
           L L+ + +++++L K  + K ++                   SI+ G           ++
Sbjct: 421 LDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEV 480

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
           F   L  +  C  +   +  L       KK   A     +M++ G  P + +    +   
Sbjct: 481 FK--LMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQ 538

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                 D A   ++ M +N ++P+    N++  A CK G   RA E +  +   G + + 
Sbjct: 539 CKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTK 595

Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
            TY +L+ G    G    A      M   G + ++ T++ L+   CK+ KL+EA  I  +
Sbjct: 596 VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQ 655

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M  + V  N+V Y  +I+   + G  +   SL+ EM+ +G K    TY   I   CK G+
Sbjct: 656 MTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGR 715

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
            ++A +L+ +++++ + P+  TY+  I G       +RAF   K M+ + C PN   + +
Sbjct: 716 IEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWL 775

Query: 479 LMSTF 483
           L+  F
Sbjct: 776 LLKHF 780



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 138/320 (43%), Gaps = 16/320 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L +L   ++++ AL    +M  + +  N+    +++    K G  + A  +F  M S G
Sbjct: 636 LLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSG 695

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             PS TTY   IS +C  G +  A      ME++G+ P+V+T+N  I G    G +  A 
Sbjct: 696 HKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAF 755

Query: 354 RIFSEMKATNVSPNVVTY---------NTLINGY-----GQVGNSE--MGASLYEEMLRN 397
                M   +  PN  TY          +LIN +     G     E  M   L E M+++
Sbjct: 756 STLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKH 815

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+   ++TY+++I G CK  + ++A  L+  +    + PN   Y+ LI   C  K   +A
Sbjct: 816 GLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKA 875

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                 MI  G +P    +  L+   C   D+DRA  +  ++L      + +    L  G
Sbjct: 876 VSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935

Query: 518 LHHCGKDELAMKLFRKMEIR 537
           L   G  +   +L   M+ R
Sbjct: 936 LLKAGHVDFCSQLLAAMDNR 955



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 149/360 (41%), Gaps = 34/360 (9%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           L T+S++L  L K +K   + SIL                D +  S   C+   + + ++
Sbjct: 630 LYTYSVLLQALCKQKKLNEALSIL----------------DQMTVSGVKCN--IVAYTII 671

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
                   K  +A   F +M   G  P   +   F+SS     R++ A     EM R+ +
Sbjct: 672 ISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGV 731

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI-------------- 305
           +P+V T N+ ++    +G I+RA    K M      P+  TY  L+              
Sbjct: 732 TPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYV 791

Query: 306 --SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
             SG  N   L++  +    M K+G+ P V+T++++I GFCK  +L EA  +   M   +
Sbjct: 792 DTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKD 851

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +SPN   Y  LI     +       S   +M+  G +  + +Y+ LI+GLC EG   +A 
Sbjct: 852 ISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAK 911

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L  DL       N   +  L  G     + +   QL  +M    CR +   + ML  + 
Sbjct: 912 SLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSI 971


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 173/378 (45%), Gaps = 38/378 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           + +T    K+ + A + F QM   GF P   + N  +  L  +     AL     M    
Sbjct: 231 MVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P   T  +++++ CK G +ERA E+F+ M + GF P+   Y +LI G    G +  A 
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
              + M + G +P+VIT   +I G CK G   +A + F EM      PNVVTY T+I G 
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++G       + + M+ +G   D +TY  L+ G CK G+  +AA L+ +LDK S  PN 
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470

Query: 439 STYSALITGQCVRKNSE------------------------------------RAFQLYK 462
             YS+L+ G C   + E                                     A ++++
Sbjct: 471 QLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQ 530

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNED--FDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
            M+  GC+P+   + +L++  C++ +   +RA  +L ++      PD++  + L  GL  
Sbjct: 531 RMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCK 590

Query: 521 CGKDELAMKLFRKMEIRG 538
            G+ + A+K+  +   RG
Sbjct: 591 IGEVDRAVKMLEEASSRG 608



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 160/345 (46%), Gaps = 38/345 (11%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   S N  + S   + R D A+  ++ M+R R  P+++T  +++   CK G
Sbjct: 144 EMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAG 203

Query: 278 IIERAVEVFKNMESMGFI------------------------------------PSVTTY 301
           + E+A EVF  M +MGF+                                    P    Y
Sbjct: 204 MDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAY 263

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           NT+I G    G    A+K  + M      P  +T+  L+   CK G L  A  +F  M A
Sbjct: 264 NTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +   PN V Y +LI+G+ + G  +   SL++EM+  G + D++T+  +I GLCK G  ++
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQ 383

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           AA   +++ +    PN  TY+ +I G         AF++ K MI  GC P+   +  L+ 
Sbjct: 384 AAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLD 443

Query: 482 TFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDE 525
            FC+    D AA+ LL+ L+KC  +P+  + S L  GL   G  E
Sbjct: 444 GFCKLGRLDEAAQ-LLDELDKCSSSPNLQLYSSLVKGLCDGGSVE 487



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 176/368 (47%), Gaps = 5/368 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+ D++L   + C  + + + +L  +         A + F  M   GF P        + 
Sbjct: 281 KVLDNMLA--KACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIH 338

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
               S R+  A   + EM      P+V T  +++   CK G  E+A + F+ M   G  P
Sbjct: 339 GFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TY T+I G    G ++ A +    M  +G  P+ +T+  L+ GFCK G+L EA ++ 
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMG-ASLYEEMLRNGIKVDILTYNALILGLCK 415
            E+   + SPN+  Y++L+ G    G+ E     L+E+       +D     ++I+GLCK
Sbjct: 459 DELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCK 518

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC-VRKNS-ERAFQLYKSMIRSGCRPNK 473
            G+  +A  + + +      P+A+TY+ LI G C  R+N  ERAF L   +   G  P+ 
Sbjct: 519 TGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDA 578

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             +  L    C+  + DRA ++L E   +    D +  + L +GL + G+ + A+ LF++
Sbjct: 579 VTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQE 638

Query: 534 MEIRGLLP 541
           M  +G  P
Sbjct: 639 MVRQGGAP 646



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 183/405 (45%), Gaps = 25/405 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+ I+++ L K    + +E + R ++ +  F   S ++ S+++ +               
Sbjct: 297 TYGILVNSLCKAGTLERAEELFR-VMAASGFRPNSVIYTSLIHGF--------------- 340

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
             A   + + A   F +M + G+ P + +    +  L  S   + A   ++EM R    P
Sbjct: 341 --AKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKP 398

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           NV T   ++    K+G +  A  + K M + G  P   TY  L+ G C  G L  A +  
Sbjct: 399 NVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-NRIFSEMKAT--NVSPNVVTYNTLINGY 378
           + ++K    PN+  +++L+ G C  G +    + +F + KA   N+ P +    ++I G 
Sbjct: 459 DELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCC--SIIVGL 516

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK--EGKTKKAAYLVKDLDKNSLVP 436
            + G  +    +++ M+  G K D  TYN LI GLC+  E + ++A  L+ DL+    +P
Sbjct: 517 CKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLP 576

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +A TY+ L  G C     +RA ++ +     G   +   +  L +  C     DRA  + 
Sbjct: 577 DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLF 636

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            EM+ +  APD+     + +GL    K E A K F +M  +G  P
Sbjct: 637 QEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKP 681



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 135/306 (44%), Gaps = 3/306 (0%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--GIIERAVEVFKN 288
           C   +  L  + R+D A   ++ M      P+  T N++++  C+     +ERA  +  +
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +E +G++P   TY  L  G C  G +  A+K        G   +V+ +  L  G C +G+
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A  +F EM     +P+   Y  +ING  +    E     ++EM+  G K  + TY A
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 409 LILGLCKEGKTKKAAYLVKD-LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
           L+  LC  G   +A +  +  L +  LV +   Y ALI G C     + A +L++ MI  
Sbjct: 689 LVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G  P       L     ++   ++A E+L EM      P +   + +  GL    +    
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808

Query: 528 MKLFRK 533
           +KL ++
Sbjct: 809 LKLVQE 814



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 107/258 (41%), Gaps = 36/258 (13%)

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F+   E+ G Q +V T+N L+     +    +   I  EM    ++PN  ++N LI  + 
Sbjct: 106 FRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFA 165

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG---------------------- 417
           +   ++   + +E M R   K D+ T+  L+  LCK G                      
Sbjct: 166 RTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDR 225

Query: 418 --------------KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
                         + K+A  +   ++K    P+A  Y+ +I G     +++ A ++  +
Sbjct: 226 ALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M+   C P +  + +L+++ C+    +RA E+   M      P+S+I + L  G    G+
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345

Query: 524 DELAMKLFRKMEIRGLLP 541
            + A  LF +M   G  P
Sbjct: 346 MKEACSLFDEMVEAGYRP 363


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 20/340 (5%)

Query: 197 DLLFKTYAHR-KKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +L  K+ +H  K   +A D F  M R   F   ++ CNK +   +   R D+A+  Y++M
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKM 132

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----- 309
              RI  N+Y+ N+++  FC    +  ++  F  +  +GF P V T+NTL+ G C     
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192

Query: 310 -----------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
                        G L     F  ++E  G+ P VITFNTLI G C +G++ EA  + ++
Sbjct: 193 SEALALFGYMVETGFLEAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    +  +VVTY T++NG  ++G+++   +L  +M    IK D++ Y+A+I  LCK+G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A YL  ++ +  + PN  TY+ +I G C       A +L + MI     P+   F  
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           L+S   +      A ++  EML +C+ PD++  + +  G 
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 46/387 (11%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL------- 248
           F++L K +    K   +  TF ++   GF P + + N  L  L   +R+  AL       
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 249 --GF------YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             GF      + +M    ++P V T N +++  C  G +  A  +   M   G    V T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y T+++G C  G    A+   + ME+  I+P+V+ ++ +I   CK G   +A  +FSEM 
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              ++PNV TYN +I+G+   G       L  +M+   I  D+LT+NALI    KEGK  
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITG-------------------------------QC 449
           +A  L  ++    + P+  TY+++I G                                C
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             K  +   QL + + R G   N   +  L+  FC+ ++ + A ++  EM+   + PD+I
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEI 536
             + L  G     K E A++LF  +++
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQM 530



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 31/326 (9%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + EM    I+PNV+T N ++  FC  G    A  + ++M      P V T+N LIS   
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS---- 365
            +G L  A K  + M    I P+ +T+N++I+GFCK  +  +A  +F  M + +V     
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437

Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                                       N  TYNTLI+G+ +V N      L++EM+ +G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  D +T N L+ G C+  K ++A  L + +  + +  +   Y+ +I G C     + A+
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+ S+   G  P+   + +++S FC       A  +  +M +    PD+   + L  G 
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
              G+ + +++L  +M   G     F
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF 643



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +S+ +   ++  A     EM    I P+  T N +++ FCK    + A  +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M S    P V T+NT+I  +C    +   M+    + + G+  N  T+NTLI GFC+
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              L+ A  +F EM +  V P+ +T N L+ G+ +    E    L+E +  + I +D + 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN +I G+CK  K  +A  L   L  + + P+  TY+ +I+G C +     A  L+  M 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            +G  P+   +  L+    +  + D++ E++ EM     + D+  +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 4/286 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L F+ L        K   A     +M      P   + N  +       R D A    K 
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V T N ++  +C+   ++  +++ + +   G + + TTYNTLI G C    
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A      M  +G+ P+ IT N L++GFC+  KL EA  +F  ++ + +  + V YN 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +    +    L+  +  +G++ D+ TYN +I G C +     A  L   +  N 
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             P+ STY+ LI G       +++ +L   M  +G   +    +M+
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 7/262 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    + FD    +FD       M     + F+ +   Y   K+         ++ 
Sbjct: 406 SMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +    + + ++ A   ++EM  + + P+  T N++++ FC+   +E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E+F+ ++          YN +I G C    +  A      +  +G++P+V T+N +I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC K  + +AN +F +MK     P+  TYNTLI G  + G  +    L  EM  NG  
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639

Query: 401 VDILTYNALILGLCKEGKTKKA 422
            D  T   ++  L  +G+  K+
Sbjct: 640 GDAFTIK-MVADLITDGRLDKS 660



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+ F + M ++      +  N +I  F +  +   A  ++ +M+   +  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA----AYLVK-- 427
           LI  +          S + ++ + G + D++T+N L+ GLC E +  +A     Y+V+  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 428 ---------DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
                     + +  L P   T++ LI G C+      A  L   M+  G   +   +  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +++  C+  D   A  +L +M E  + PD +I S +   L   G    A  LF +M  +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 539 LLPKGFDKLRTINC 552
           + P  F    T NC
Sbjct: 327 IAPNVF----TYNC 336


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 209/453 (46%), Gaps = 53/453 (11%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           L+L FF  +        T  T  +++  L  + +  S + +L+  +    F     LF S
Sbjct: 58  LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQ-MKLQGFHCSEDLFIS 116

Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           ++  YR                A R     A + F +++++G  P ++  N  L +LL  
Sbjct: 117 VISVYRQVG------------LAER-----AVEMFYRIKEFGCDPSVKIYNHVLDTLLGE 159

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R+ +    Y++M+R+   PNV+T N+++ A CK   ++ A ++   M + G  P   +Y
Sbjct: 160 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSY 219

Query: 302 NTLISGHCNKGLL----SLAMKFKNL--------------------------MEKNGIQP 331
            T+IS  C  GL+     LA +F+ +                          M + GI P
Sbjct: 220 TTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NVI+++TLI   C  G++  A    ++M      PN+ T ++L+ G    G +     L+
Sbjct: 280 NVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLW 339

Query: 392 EEMLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +M+R  G++ +++ YN L+ G C  G   KA  +   +++    PN  TY +LI G   
Sbjct: 340 NQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAK 399

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML--EKCMAPDS 508
           R + + A  ++  M+ SGC PN  ++  ++   C++  F + AE L+E++  E C AP  
Sbjct: 400 RGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF-KEAESLIEIMSKENC-APSV 457

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +    GL   G+ + A K+FR+ME +   P
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490



 Score =  144 bits (364), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 158/320 (49%), Gaps = 2/320 (0%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           F P++   N  ++ L        A    +EM    ISPNV + + +++  C  G IE A 
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFG 342
                M   G  P++ T ++L+ G   +G    A+   N M +  G+QPNV+ +NTL+ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FC  G + +A  +FS M+    SPN+ TY +LING+ + G+ +    ++ +ML +G   +
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ Y  ++  LC+  K K+A  L++ + K +  P+  T++A I G C     + A ++++
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481

Query: 463 SMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
            M +   C PN   +  L+    +    + A  +  E+  + +   S   + L  G  + 
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G   +A++L  KM + G  P
Sbjct: 542 GLPGIALQLVGKMMVDGKSP 561



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 140/324 (43%), Gaps = 4/324 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVD 245
           R C  +      L K    R    +A D + QM R +G  P + + N  +        + 
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A+  +  M     SPN+ T   +++ F K G ++ AV ++  M + G  P+V  Y  ++
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN-V 364
              C       A     +M K    P+V TFN  I G C  G+L  A ++F +M+  +  
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            PN+VTYN L++G  +    E    L  E+   G++    TYN L+ G C  G    A  
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK--SMIRSGCRPNKHIFEMLMST 482
           LV  +  +   P+  T + +I   C +  +ERA Q+    S  R   RP+   +  ++  
Sbjct: 550 LVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWG 609

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAP 506
            C++   +    +L  M+   + P
Sbjct: 610 LCRSNCREDGVILLERMISAGIVP 633



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 38/290 (13%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L + +        A   F  M + G  P I +    ++       +D A+  + +
Sbjct: 353 VAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNK 412

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  +   PNV     ++ A C+    + A  + + M      PSV T+N  I G C+ G 
Sbjct: 413 MLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 472

Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           L  A K F+ + +++   PN++T+N L+ G  K  ++ EA  +  E+    V  +  TYN
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYN 532

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA--------- 423
           TL++G    G   +   L  +M+ +G   D +T N +IL  CK+GK ++AA         
Sbjct: 533 TLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCG 592

Query: 424 ----------------------------YLVKDLDKNSLVPNASTYSALI 445
                                        L++ +    +VP+ +T+S LI
Sbjct: 593 RRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 111/261 (42%), Gaps = 40/261 (15%)

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
            ++  S++ G     S D    +++ +L S   C  + +V+  + +      KF+ A   
Sbjct: 387 IRTYGSLINGFAKRGSLDGAVYIWNKMLTS--GCCPNVVVYTNMVEALCRHSKFKEAESL 444

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFC 274
              M      P + + N F+  L D+ R+D A   +++M +++R  PN+ T N ++    
Sbjct: 445 IEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLA 504

Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
           K   IE A  + + +   G   S +TYNTL+ G CN GL  +A++    M  +G  P+ I
Sbjct: 505 KANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEI 564

Query: 335 TFNTLIFGFCKKGKLHEANR-------------------------------------IFS 357
           T N +I  +CK+GK   A +                                     +  
Sbjct: 565 TMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLE 624

Query: 358 EMKATNVSPNVVTYNTLINGY 378
            M +  + P++ T++ LIN +
Sbjct: 625 RMISAGIVPSIATWSVLINCF 645


>gi|255584218|ref|XP_002532847.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527384|gb|EEF29525.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 505

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 214/484 (44%), Gaps = 58/484 (11%)

Query: 102 THLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK--NRKFKSS 159
           TH + F + H LLK                     +L  E  S++L IL+   +  F + 
Sbjct: 24  THQSVFFIVHYLLKF--------------------NLKSEVQSLLLQILSNRISSPFFTV 63

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
            S+L  + +  S   P                S L+++ +   Y        A   F QM
Sbjct: 64  SSLLENLTEPISIPCPK--------------ISSLLYESIISVYIQSGSIELAVLYFNQM 109

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            D G +      N  L SL+ S+  +     + E++  +I  +VYT  +++   C+ G+ 
Sbjct: 110 VDKGLVFEPNIFNTLLDSLVKSKCFEKLWFVFNEVK-GKIELDVYTYGIMIKGCCEAGVF 168

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            +  E+  ++E MG  P+V  Y TLI G C  G +  A    N M +  +  N  T+  L
Sbjct: 169 YKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAKLLFNKMGEVNLVANQYTYTVL 228

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GF KKG   +   +F +M+   V PN+ TYN +IN +   G       L++EM + G+
Sbjct: 229 INGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGV 288

Query: 400 KVDILTYNALILGLCKEGKT----------KKAAY-----------LVKDLDKNSLVPNA 438
             +++TYN LI GLC++ +           K+A Y           LV+++++  + P+ 
Sbjct: 289 VSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSK 348

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ L        + E+AF  Y SM + G  P+ HI+ +L+   C   +   A+++   
Sbjct: 349 VTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRS 408

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           M E  + P+ ++ + + +G    G    A++  ++ME + L+P       TI    ++G+
Sbjct: 409 MAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGK 468

Query: 559 KESG 562
            +  
Sbjct: 469 WQEA 472



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 175/399 (43%), Gaps = 32/399 (8%)

Query: 137 SLTLETHSIVLHILTKNRKFKSS----ESILRGILDSDSFDLPSKLFDSILYSYRMCDS- 191
           S+ +++ SI L +L  N+          +I   +LDS    + SK F+ + + +      
Sbjct: 91  SVYIQSGSIELAVLYFNQMVDKGLVFEPNIFNTLLDSL---VKSKCFEKLWFVFNEVKGK 147

Query: 192 ---SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
                  + ++ K       F    +    +   G  P +      +     +  V  A 
Sbjct: 148 IELDVYTYGIMIKGCCEAGVFYKGFELLTDLEKMGLSPNVVIYTTLIDGCCKNGDVRRAK 207

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M    +  N YT  ++++ F K G+ +   E+F+ M+  G  P++ TYN +I+  
Sbjct: 208 LLFNKMGEVNLVANQYTYTVLINGFFKKGLRKDGFELFEKMQLDGVFPNLYTYNCMINEF 267

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN----- 363
           CN+G L  A +  + M K G+  NV+T+NTLI G C+K ++ EA ++  +MK        
Sbjct: 268 CNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLCRKTRIWEAEKLVDQMKRAGYSNGG 327

Query: 364 ----------------VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
                           +SP+ VTY  L N + ++G+ E     Y  M + G+  D+  Y 
Sbjct: 328 NWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGDMEKAFHFYSSMEKVGLVPDVHIYG 387

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            L+ GLC +G  K+A+ L + + +  L PN   Y+ +I G C   NS RA +  K M   
Sbjct: 388 VLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNTMINGYCKAGNSFRALRFLKEMEDK 447

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
              PN   +   +   C++  +  A  +L +M    + P
Sbjct: 448 RLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEP 486



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 123/251 (49%), Gaps = 21/251 (8%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            +++M+ + + PN+YT N +++ FC  G + +A E+F  M   G + +V TYNTLISG C
Sbjct: 244 LFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTLISGLC 303

Query: 310 NKGLLSLAMKFKNLM---------------------EKNGIQPNVITFNTLIFGFCKKGK 348
            K  +  A K  + M                     E+ GI P+ +T+  L     + G 
Sbjct: 304 RKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAHVRLGD 363

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A   +S M+   + P+V  Y  L++G    GN +  + L+  M    ++ + + YN 
Sbjct: 364 MEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNEVVYNT 423

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I G CK G + +A   +K+++   LVPN ++YS+ I   C     + A  L   M  SG
Sbjct: 424 MINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSG 483

Query: 469 CRPNKHIFEML 479
             P+  I+ ++
Sbjct: 484 LEPSVSIYNII 494



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           ++  + F +M+  G  P + + N  ++   +  ++  A   + EM +  +  NV T N +
Sbjct: 239 KDGFELFEKMQLDGVFPNLYTYNCMINEFCNEGKLHKAYELFDEMCKRGVVSNVVTYNTL 298

Query: 270 MHAFCKLGIIERA---------------------VEVFKNMESMGFIPSVTTYNTLISGH 308
           +   C+   I  A                      ++ + ME  G  PS  TY  L + H
Sbjct: 299 ISGLCRKTRIWEAEKLVDQMKRAGYSNGGNWVDVTDLVREMEERGISPSKVTYTILTNAH 358

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
              G +  A  F + MEK G+ P+V  +  L+ G C KG + EA+++F  M    + PN 
Sbjct: 359 VRLGDMEKAFHFYSSMEKVGLVPDVHIYGVLLHGLCVKGNMKEASKLFRSMAEMKLEPNE 418

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V YNT+INGY + GNS       +EM    +  ++ +Y++ I  LCK+GK ++A  L+  
Sbjct: 419 VVYNTMINGYCKAGNSFRALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNK 478

Query: 429 LDKNSLVPNASTYSAL 444
           +  + L P+ S Y+ +
Sbjct: 479 MRGSGLEPSVSIYNII 494



 Score = 42.0 bits (97), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 34/69 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F KEM   R+ PNV + +  +   CK G  + A  +   M   G  PSV+ YN +  
Sbjct: 437 ALRFLKEMEDKRLVPNVASYSSTIGILCKDGKWQEAEILLNKMRGSGLEPSVSIYNIISK 496

Query: 307 GHCNKGLLS 315
              +K LL+
Sbjct: 497 AKYSKELLT 505


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 201/417 (48%), Gaps = 21/417 (5%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI 182
           + E    ++  K  +  L T+S V++   K  +   +  ILR ++  D    P    D +
Sbjct: 28  AYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGM-AP----DVV 82

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
            Y+         V D L +      K   A +   +M+  G  P   + +  ++   ++ 
Sbjct: 83  TYTS--------VVDGLCRD----GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNAR 130

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME---SMGFIPSVT 299
           +VD AL  YKE+  +    +  + + ++   C+   I  A E+F+ ME      + P V 
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY  LI G C  G L  AMK   +ME     PNV+T+++L+ G CK G L +A  +F  M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            +    PNVVTY TLI+G       +    L +EM       D ++YNAL+ G C+ G+ 
Sbjct: 251 TSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSGCRPNKHIFEM 478
           ++A  L K++   S +P+  TY+ L+ G C     E A  L ++M   +G  P+   + +
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +++ + + + F  AAE + EM+ + +AP+++  S L  GL   G+   AM++ + ++
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD 427



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 168/328 (51%), Gaps = 6/328 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLG 277
           MR++   P   + N  ++ L  +     A    KEMR  + ++P++ T + V++ FCK G
Sbjct: 1   MREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQG 59

Query: 278 IIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
            ++RA E+ + M +  G  P V TY +++ G C  G +  A +    M+  G++P+  TF
Sbjct: 60  EMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTF 119

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM-L 395
           + LI G+C   K+ EA +++ E+  ++   + V+ + LI G  +         L++EM +
Sbjct: 120 SALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEM 179

Query: 396 R--NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           R     K D++TY ALI G CK G  +KA  ++  ++    VPN  TYS+L+ G C   +
Sbjct: 180 REDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGD 239

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            ++A  L++ M   GC PN   +  L+   C     D A  ++ EM   C   D++  + 
Sbjct: 240 LDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNA 299

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           L  G    G+ E A +LF++M  +  LP
Sbjct: 300 LLDGYCRLGRIEEAKQLFKEMAAKSCLP 327



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 16/387 (4%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + +  L            A D F +M   G +P + +    +  L  + +VD 
Sbjct: 218 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 277

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A     EM       +  + N ++  +C+LG IE A ++FK M +   +P   TY  L+ 
Sbjct: 278 ARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVR 337

Query: 307 GHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G CN   L  A    +N+    GI P+V+T++ ++ G+ +  +  EA     EM A NV+
Sbjct: 338 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 397

Query: 366 PNVVTYNTLINGYGQVG--NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           PN VTY++LI+G  + G  N  M      E+L+N  K D++TY  +I GLC   +T++A 
Sbjct: 398 PNAVTYSSLIDGLCKAGRVNHAM------EVLKNVDKPDVVTYTIVIEGLCGTDRTEEAL 451

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L++++    + P+  T++++I   C   + + A++L  +M   G  P    +  L+  F
Sbjct: 452 TLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 511

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSI-------ILSELYSGLHHCGKDELAMKLFRKMEI 536
            +    + A E+   M  K     S          S L  GL    + + AM +  ++  
Sbjct: 512 SRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571

Query: 537 RGLLPKGFDKLRTINCAPENGEKESGG 563
           R   P   D L  ++     G  E  G
Sbjct: 572 RECEPAEEDCLAIVDGLLRAGRTEEAG 598



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 11/229 (4%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  F +EM    ++PN  T + ++   CK G +  A+EV KN++     P V TY  +I 
Sbjct: 384 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIE 439

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C       A+     M    ++P+V TFN++I   C+ G + EA ++   M A  + P
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEP 499

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK-------VDILTYNALILGLCKEGKT 419
            +VTY TL+ G+ + G  E+   L+E M R   K       V    ++ALI GLCK  + 
Sbjct: 500 GMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREI 559

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
            KA  +V++L      P      A++ G      +E A +L  S+ + G
Sbjct: 560 DKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 4/114 (3%)

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDR 491
           + PN  TY+ ++ G C  + + +A+++ K M R G    P+   +  +++ FC+  + DR
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEM-RDGKSVAPDLVTYSTVINGFCKQGEMDR 63

Query: 492 AAEVLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           A E+L EM+ +  MAPD +  + +  GL   GK + A ++ R+M+++G+ P  F
Sbjct: 64  ACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 117


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 218/480 (45%), Gaps = 45/480 (9%)

Query: 93  DWKK---LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHI 149
           +W+K   L +L +H+ P     V+   + D  + + FF WV  H          + +L +
Sbjct: 53  NWEKNSSLKSLVSHMNPNVASQVISLQRSDNDICVRFFMWVCKHSSYCFDPTQKNQLLKL 112

Query: 150 LTKNRKFKSSESILRGILDSDSFDLPSKL-----FDSI--LYSYRM---CDSSPLV---- 195
           +  +  ++ + +++  ++   S      L     FD +  ++ +R+   C SS L+    
Sbjct: 113 IVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAK 172

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFL-------PIIESCNKFLSSLL------DSE 242
            DL F  Y   ++   A      M DY  +          E+   F+S +L      DS 
Sbjct: 173 LDLGFLAYVTYRRME-ADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSH 231

Query: 243 -RVDIALGFYKEM-------------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
               + LGF + +             +    +PN  + ++++H  C++G +E A  +   
Sbjct: 232 IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQ 291

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M   G  PS  TY  LI   C++GL+  A    + M   G +PNV T+  LI G C+ GK
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + EAN +  +M    + P+V+TYN LINGY + G       L   M +   K ++ T+N 
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+ GLC+ GK  KA +L+K +  N L P+  +Y+ LI G C   +   A++L  SM    
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFD 471

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P+   F  +++ FC+    D A+  L  ML K ++ D +  + L  G+   GK   A+
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 192/432 (44%), Gaps = 71/432 (16%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           K+FD ++     C  + + + +L        +   A     QM + G  P   +    + 
Sbjct: 251 KVFD-VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK 309

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           +L D   +D A   + EM      PNV+T  +++   C+ G IE A  V + M      P
Sbjct: 310 ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFP 369

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEK------------------------------ 326
           SV TYN LI+G+C  G +  A +   +MEK                              
Sbjct: 370 SVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLL 429

Query: 327 -----NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
                NG+ P+++++N LI G C++G ++ A ++ S M   ++ P+ +T+  +IN + + 
Sbjct: 430 KRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ 489

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL------------ 429
           G +++ ++    MLR GI +D +T   LI G+CK GKT+ A ++++ L            
Sbjct: 490 GKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSL 549

Query: 430 -----------------------DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
                                  +K  LVP+  TY+ L+ G     +   +F++ + M  
Sbjct: 550 NVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           SGC PN + + ++++  CQ    + A ++L  M +  ++P+ +  + +  G  + GK + 
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669

Query: 527 AMKLFRKMEIRG 538
           A++  R M  RG
Sbjct: 670 ALETVRAMVERG 681



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 151/392 (38%), Gaps = 72/392 (18%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++ + D    D    LFD ++   R C  +   + +L        K   A     +M  
Sbjct: 307 LIKALCDRGLIDKAFNLFDEMIP--RGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P + + N  ++      RV  A      M +    PNV T N +M   C++G   +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK---------------------- 319
           AV + K M   G  P + +YN LI G C +G ++ A K                      
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 320 -------------FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA---------NRIFS 357
                        F  LM + GI  + +T  TLI G CK GK  +A          RI +
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 358 EMKATNV--------------------------SPNVVTYNTLINGYGQVGNSEMGASLY 391
              + NV                           P+VVTY TL++G  + G+      + 
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E M  +G   ++  Y  +I GLC+ G+ ++A  L+  +  + + PN  TY+ ++ G    
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
              +RA +  ++M+  G   N  I+  L+  F
Sbjct: 665 GKLDRALETVRAMVERGYELNDRIYSSLLQGF 696



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 56/308 (18%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL   + + + RI    ++LN+++    K   ++  + +   +  +G +PSV TY TL+ 
Sbjct: 530 ALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVD 589

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G ++ + +   LM+ +G  PNV  +  +I G C+ G++ EA ++ S M+ + VSP
Sbjct: 590 GLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSP 649

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG-------------- 412
           N VTY  ++ GY   G  +        M+  G +++   Y++L+ G              
Sbjct: 650 NHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEES 709

Query: 413 ---------------------------------------LCKEGKTKKAAYLVKD-LDKN 432
                                                  LCKEG+T ++  LV++ L++ 
Sbjct: 710 TVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERG 769

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
             +  A     ++   C +K   +  +L   +++SG  P+   F +++    +  D +RA
Sbjct: 770 VFLEKA--MDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827

Query: 493 AEVLLEML 500
            E+++E+L
Sbjct: 828 RELVMELL 835


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 35/360 (9%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C++ D G +P + + N  +  L  +ER D A   +KEM    + PN  T  +++HA CK 
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA------------------- 317
           G+IE A+ +F  M   G   +V  YN+LI+G+C +G L  A                   
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 318 ----------------MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
                           M+    M + GI  N  TF  LI GFCK  K+ EA R+F +M  
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +NV PN VT+N +I GY  VGN      LY++M+  G+K D  TY +LI GLC      K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   V DL+ +  V N  + +AL+ G          + L+  M   G + +   F +++ 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +  D +++  +  EM E+ + PD I  + +   L        A+  + +M + G  P
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 686



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 178/387 (45%), Gaps = 2/387 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  IL  ++    F L   LFD +L S    D    V+    + Y   +    A     
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDE--YVYTAGIRAYCESRNLDGARGLVV 222

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G        N  +  L  + RV  A+     M    ++ +  T   +++ FC++ 
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+ +  +M  +GF+PS    + +I     K L+  A      +   G+ PNV  +N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +  +A+R+F EM    + PN VTY  LI+   + G  E    L+++M   
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIKV +  YN+LI G CK+G   +A  L+  + K  L P A++YS LI G C   +    
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L++ M   G   N + F  L++ FC+++  D AA +  +M++  + P+ +  + +  G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G    A +L+ +M   GL P  +
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNY 549



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 13/349 (3%)

Query: 204 AHRKKFRNATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERVDIALGF 250
           A    +R     FC+M +              GF+P   +C+  +  L   E V+ A   
Sbjct: 266 ADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++    + PNV+  N ++   CK    + A  +FK M   G  P+  TY  LI   C 
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G++  A+   + M   GI+  V  +N+LI G+CK+G L  A  + S M    ++P   +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ LI G  + G+      L+ EM   GI  +  T+ ALI G CK+ K  +AA L   + 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            ++++PN  T++ +I G C+  N  +AFQLY  M+  G +P+ + +  L+S  C      
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +A E + ++       ++  L+ L  G    G+      L+ +M +RG+
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 38/393 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D  ++LFD ++ S  +   + + F+++ + Y      R A   + QM 
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVI--PNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 221 DYGFLPI----------------IESCNKFLSSLLDSERV-------DIALGFYKEMRRN 257
           + G  P                 +   N+F++ L +S  V        +  GF++E R  
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 258 R------------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                        +  ++ +  ++++A  K    E++  +F+ M+  G  P    Y  +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                +  +  A+   + M  +G  PN +T   LI   CK G L  A  +  EM A NV 
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TYN  ++ +   G+ E    L+  ML+ G    I+++N LI GLCK GK ++A  L
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  + ++   P+  +YS +I   C   +  +AF+L+  M+  G +P+   + + +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + + D+A  +   M+   + P+      L SG+
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 140/301 (46%), Gaps = 3/301 (0%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           +++D A   + +M  + + PN  T N+++  +C +G I +A +++  M  MG  P   TY
Sbjct: 492 KKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTY 551

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
            +LISG C    +S A +F   +E +    N  +   L++GF ++G+  E   ++ EM  
Sbjct: 552 RSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAV 611

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V  ++V++  ++    +  + E    L+ EM   G+K D + Y  +I  L KE    +
Sbjct: 612 RGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQ 671

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A      +  +   PN  T++ LI   C       A  L K M+     PNK  +   + 
Sbjct: 672 ALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLD 731

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSII-LSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            F    D ++A ++   ML+  +A  SI+  + L  GL   GK + A+ L  K+   G  
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFS 789

Query: 541 P 541
           P
Sbjct: 790 P 790



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 165/366 (45%), Gaps = 18/366 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L K           RG+++ D+  L  K+ D      +    +   ++ L  
Sbjct: 375 TYAILIHALCK-----------RGMIE-DALCLFDKMRD------KGIKVTVYPYNSLIN 416

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y  +     A      M   G  P   S +  ++ L  +  +   +  ++EM    I+ 
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 476

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT   +++ FCK   ++ A  +F  M     IP+  T+N +I G+C  G +  A +  
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P+  T+ +LI G C    + +AN   ++++ +    N  +   L+ G+ + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L++EM   G+K+D++++  ++    K+   +K+  L +++ +  + P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I      +N  +A   +  M+  G  PN     +L++  C++     A  +  EML 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 502 KCMAPD 507
             + P+
Sbjct: 717 GNVLPN 722


>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
           from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
           contains a PPR repeat domain PF|01535 [Arabidopsis
           thaliana]
          Length = 797

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 208/443 (46%), Gaps = 31/443 (6%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA 204
           +V H+L   R+FK  + IL  +L  +     S+L + +  S+R  +S+ LV+D+L    +
Sbjct: 89  LVSHVLAGQRRFKELQVILEQLLQEEGSGSASRLCELLSNSFRKWESTGLVWDMLLFLSS 148

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFL------------------------SSLLD 240
             +   ++     +M+D       +S N  L                        S+++D
Sbjct: 149 RLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVD 208

Query: 241 S----ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                ++++ A+ F +      I P+V + N +M  +CKLG ++ A   F  +   G +P
Sbjct: 209 GLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVP 268

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           SV ++N LI+G C  G ++ A++  + M K+G++P+ +T+N L  GF   G +  A  + 
Sbjct: 269 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 328

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD-ILTYNALILGLCK 415
            +M    +SP+V+TY  L+ G  Q+GN +MG  L ++ML  G +++ I+  + ++ GLCK
Sbjct: 329 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCK 388

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+  +A  L   +  + L P+   YS +I G C     + A  LY  M      PN   
Sbjct: 389 TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 448

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
              L+   CQ      A  +L  ++      D ++ + +  G    G  E A++LF+ + 
Sbjct: 449 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 508

Query: 536 IRGLLPK--GFDKLRTINCAPEN 556
             G+ P    F+ L    C  +N
Sbjct: 509 ETGITPSVATFNSLIYGYCKTQN 531



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 182/370 (49%), Gaps = 5/370 (1%)

Query: 177 KLFDSILY----SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           KL D++L+     ++    S + F+ +   Y        A   FC +   G +P + S N
Sbjct: 215 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 274

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             ++ L     +  AL    +M ++ + P+  T N++   F  LG+I  A EV ++M   
Sbjct: 275 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDK 334

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN-VITFNTLIFGFCKKGKLHE 351
           G  P V TY  L+ G C  G + + +     M   G + N +I  + ++ G CK G++ E
Sbjct: 335 GLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDE 394

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F++MKA  +SP++V Y+ +I+G  ++G  +M   LY+EM    I  +  T+ AL+L
Sbjct: 395 ALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLL 454

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC++G   +A  L+  L  +    +   Y+ +I G       E A +L+K +I +G  P
Sbjct: 455 GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP 514

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   F  L+  +C+ ++   A ++L  +    +AP  +  + L     +CG  +   +L 
Sbjct: 515 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 574

Query: 532 RKMEIRGLLP 541
           R+M+  G+ P
Sbjct: 575 REMKAEGIPP 584



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 163/345 (47%), Gaps = 16/345 (4%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +   A   F QM+  G  P + + +  +  L    + D+AL  Y EM   RI PN  T  
Sbjct: 391 RIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHG 450

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   C+ G++  A  +  ++ S G    +  YN +I G+   G +  A++   ++ + 
Sbjct: 451 ALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIET 510

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI P+V TFN+LI+G+CK   + EA +I   +K   ++P+VV+Y TL++ Y   GN++  
Sbjct: 511 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 570

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL------------VKDLDKNSLV 435
             L  EM   GI    +TY+ +  GLC+  K +   ++            ++D++   + 
Sbjct: 571 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 630

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  TY+ +I   C  K+   AF   + M       +   + +L+ + C      +A   
Sbjct: 631 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF 690

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRG 538
           +  + E+ ++      + L     HC  G  E+A+KLF ++  RG
Sbjct: 691 IYSLQEQNVSLSKFAYTTLIKA--HCVKGDPEMAVKLFHQLLHRG 733



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 132/277 (47%), Gaps = 14/277 (5%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           ++ AL  +K +    I+P+V T N +++ +CK   I  A ++   ++  G  PSV +Y T
Sbjct: 497 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 556

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE----- 358
           L+  + N G      + +  M+  GI P  +T++ +  G C+  K    N +  E     
Sbjct: 557 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEK 616

Query: 359 -------MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALI 410
                  M++  + P+ +TYNT+I    +V +   GA ++ E++++  +     TYN LI
Sbjct: 617 CKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLS-GAFVFLEIMKSRNLDASSATYNILI 675

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             LC  G  +KA   +  L + ++  +   Y+ LI   CV+ + E A +L+  ++  G  
Sbjct: 676 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFN 735

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            +   +  +++  C+    + +      ML + ++PD
Sbjct: 736 VSIRDYSAVINRLCRRHLVNESKFFFCLMLSQGISPD 772



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 12/236 (5%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   F+ L   Y   +    A      ++ YG  P + S    + +  +           
Sbjct: 515 SVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELR 574

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLG------------IIERAVEVFKNMESMGFIPSVT 299
           +EM+   I P   T +++    C+              I E+  +  ++MES G  P   
Sbjct: 575 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQI 634

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYNT+I   C    LS A  F  +M+   +  +  T+N LI   C  G + +A+     +
Sbjct: 635 TYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSL 694

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           +  NVS +   Y TLI  +   G+ EM   L+ ++L  G  V I  Y+A+I  LC+
Sbjct: 695 QEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 750



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/374 (21%), Positives = 145/374 (38%), Gaps = 33/374 (8%)

Query: 140 LETHSIVLHILTKNRKF-------------------KSSESILRGILDSDSFDLPSKLFD 180
           L  +SIV+H L K  KF                   ++  ++L G+           L D
Sbjct: 411 LVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLD 470

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           S++ S    D   ++++++   YA       A + F  + + G  P + + N  +     
Sbjct: 471 SLISSGETLD--IVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCK 528

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           ++ +  A      ++   ++P+V +   +M A+   G  +   E+ + M++ G  P+  T
Sbjct: 529 TQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVT 588

Query: 301 YNTLISGHCN------------KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           Y+ +  G C             + +     +    ME  GI P+ IT+NT+I   C+   
Sbjct: 589 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 648

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           L  A      MK+ N+  +  TYN LI+     G      S    +    + +    Y  
Sbjct: 649 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 708

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI   C +G  + A  L   L       +   YSA+I   C R     +   +  M+  G
Sbjct: 709 LIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRRHLVNESKFFFCLMLSQG 768

Query: 469 CRPNKHIFEMLMST 482
             P+  I E+++ +
Sbjct: 769 ISPDLDICEVMIKS 782


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 206/433 (47%), Gaps = 35/433 (8%)

Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKN-RKFKSSESILRGILDSDSFDLPSKLFD 180
           L+++FF W          + +++ +L IL K+  +F++                  K++ 
Sbjct: 9   LAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTG-----------------KVYK 51

Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
            +L+S   C  + + F +L +      +   A +    + ++   P +   N  +  L  
Sbjct: 52  DLLHSG--CSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFK 109

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF--IPSV 298
               D A+  ++ M  +R++P+++T N V+   CK G +E+A E+ + M   G    P +
Sbjct: 110 DGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDI 169

Query: 299 TTYNTLI-SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
            TYNTLI +G C  G +  A++  + M+  G  P+VIT+N++I   C  G++ EA  I  
Sbjct: 170 VTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEI-- 227

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            +K  + SP++VT+NTL++G+ + G       + EEM R  I  D++TY  L+ GLC+ G
Sbjct: 228 -LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVG 286

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK---------SMIRSG 468
           + + A YL++++ +   +P+   Y++L+ G C     E A +L K          M+   
Sbjct: 287 QVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSIN 346

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
             P    + +++    ++    +A  ++ +++ +   PD +  + L  GL    +   A 
Sbjct: 347 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 406

Query: 529 KLFRKMEIRGLLP 541
            L  +M   G  P
Sbjct: 407 DLADEMASLGCFP 419



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 165/334 (49%), Gaps = 12/334 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+  G  P + + N  + +L  + RV  A    K M     SP++ T N ++  FCK G+
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGM 252

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           + RA+EV + M     +P V TY  L++G C  G + +A      + + G  P+VI + +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312

Query: 339 LIFGFCKKGKLHEANR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           L+ G CK G++ EA++         I +EM + N+ P + TYN ++ G  + G+     S
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L  +++  G   D++TYN LI GLCK  + ++A  L  ++      PN  T  +++ G C
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLC 432

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                + A+ L   M R    PN  ++  L+   C+++  D A  VL  M  + +A D  
Sbjct: 433 RVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDF 492

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
              +L   + H G+   AM ++ +M  RG LP G
Sbjct: 493 AYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDG 526



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 172/326 (52%), Gaps = 7/326 (2%)

Query: 241 SERVDIALGFYKEM-RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
           S R D+A+ F+     ++    +V++ N ++    K G   R  +V+K++   G  P++ 
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLV 63

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           T+  LI G+C  G  + A++F   +++  + P+V  FN LI G  K G   +A ++F  M
Sbjct: 64  TFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM 123

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV--DILTYNALI-LGLCKE 416
           +++ V+P++ TYNT+I+G  + GN E    L EEM+R G K   DI+TYN LI  G+CK+
Sbjct: 124 ESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD 183

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G  ++A  ++  +      P+  TY+++I   CV      A ++ K+M    C P+   F
Sbjct: 184 GDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTF 240

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+  FC+     RA EVL EM  + + PD I  + L +GL   G+ ++A  L  ++  
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 537 RGLLPKGFDKLRTINCAPENGEKESG 562
           +G +P        ++   ++GE E  
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEA 326



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 9/311 (2%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + F+ L   +        A +   +M     LP + +    ++ L    +V +A 
Sbjct: 233 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 292

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA---------VEVFKNMESMGFIPSVT 299
              +E+ R    P+V     ++   CK G IE A          E+   M S+  +P + 
Sbjct: 293 YLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLF 352

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYN ++ G    G +S A+   + +   G  P+V+T+NTLI G CK  ++ EA  +  EM
Sbjct: 353 TYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEM 412

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            +    PN VT  +++ G  +VG  +   SL  EM R     +++ Y +LI GLCK  + 
Sbjct: 413 ASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRM 472

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A  ++  +    +  +   Y  LI           A  +Y  M+  G  P+    + L
Sbjct: 473 DDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532

Query: 480 MSTFCQNEDFD 490
                 N  F+
Sbjct: 533 EEAAMSNSVFE 543


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 154/296 (52%), Gaps = 1/296 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V  AL +++      + PN+     ++   CK G +++A E+ + M   G+ P+V T+  
Sbjct: 253 VTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTA 312

Query: 304 LISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           LI G C KG    A + F  L+     +PNV+T+  +I G+C+  K++ A  + S MK  
Sbjct: 313 LIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            ++PN  TY TLI+G+ + GN E    L   M   G   ++ TYNA++ GLCK+G+ ++A
Sbjct: 373 GLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEA 432

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             ++K   +N L  +  TY+ LI+  C +   ++A  L+  M++SG +P+ H +  L++ 
Sbjct: 433 YKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAV 492

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           FC+ +    +     E +   + P +   + +  G    G   LA+K F +M   G
Sbjct: 493 FCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHG 548



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 8/413 (1%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSI---LYSYRMCDS 191
           P+SLT +    ++  L  +     + S     + S  F   ++L+ +    L S +  + 
Sbjct: 71  PNSLTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEK 130

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           +  V   + K++A   + + A +   +M + G  P  ++ N  +  + +   V+ A   +
Sbjct: 131 AHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLF 190

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM    + PN  +  +++  +CKLG +  +      M   GF+    T + ++   C K
Sbjct: 191 DEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEK 250

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G ++ A+ +     + G++PN+I F  +I G CK+G + +A  +  EM      PNV T+
Sbjct: 251 GFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTH 310

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
             LI+G  + G +E    L+ +++R+   K ++LTY A+I G C++ K  +A  L+  + 
Sbjct: 311 TALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMK 370

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +  L PN +TY+ LI G C   N ERA++L   M   G  PN   +  ++   C+     
Sbjct: 371 EQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQ 430

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            A +VL       +  D +  + L S   HC + E+  A+ LF KM   G+ P
Sbjct: 431 EAYKVLKSGFRNGLDADKVTYTILIS--EHCKQAEIKQALVLFNKMVKSGIQP 481



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 166/362 (45%), Gaps = 9/362 (2%)

Query: 181 SILYSYRMCD----SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++ Y  R C+     + + F  + +    R   + A +   +M   G+ P + +    + 
Sbjct: 256 ALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALID 315

Query: 237 SLLDSERVDIALG-FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            L      + A   F K +R     PNV T   ++  +C+   + RA  +   M+  G  
Sbjct: 316 GLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLA 375

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+  TY TLI GHC  G    A +  N+M + G  PNV T+N ++ G CKKG++ EA ++
Sbjct: 376 PNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
                   +  + VTY  LI+ + +    +    L+ +M+++GI+ DI +Y  LI   C+
Sbjct: 436 LKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCR 495

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
           E + K++    ++  +  LVP   TY+++I G C   N   A + +  M   GC  +   
Sbjct: 496 EKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSIT 555

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE--LAMKLFRK 533
           +  L+S  C+    D A  +   M+EK + P  +    L     +C  D+   AM +  +
Sbjct: 556 YGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTL--AYEYCKIDDGCSAMVVLER 613

Query: 534 ME 535
           +E
Sbjct: 614 LE 615



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/327 (29%), Positives = 152/327 (46%), Gaps = 4/327 (1%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           FC+M   G  P + +    +  L     V  A    +EM      PNVYT   ++   CK
Sbjct: 263 FCEM---GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCK 319

Query: 276 LGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
            G  E+A  +F K + S    P+V TY  +ISG+C    ++ A    + M++ G+ PN  
Sbjct: 320 KGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTN 379

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+ TLI G CK G    A  + + M     SPNV TYN +++G  + G  +    + +  
Sbjct: 380 TYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSG 439

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            RNG+  D +TY  LI   CK+ + K+A  L   + K+ + P+  +Y+ LI   C  K  
Sbjct: 440 FRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRM 499

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + +   ++  +R G  P    +  ++  +C+  +   A +    M +   A DSI    L
Sbjct: 500 KESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGAL 559

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            SGL    K + A  L+  M  +GL P
Sbjct: 560 ISGLCKQSKLDEARCLYDAMIEKGLTP 586



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 137/277 (49%), Gaps = 1/277 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + +    +S     E+++ A      M+   ++PN  T   ++   CK G  ERA E+
Sbjct: 341 PNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYEL 400

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   GF P+V TYN ++ G C KG +  A K      +NG+  + +T+  LI   CK
Sbjct: 401 MNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCK 460

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           + ++ +A  +F++M  + + P++ +Y TLI  + +    +     +EE +R G+     T
Sbjct: 461 QAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKT 520

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y ++I G C+EG  + A      +  +    ++ TY ALI+G C +   + A  LY +MI
Sbjct: 521 YTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMI 580

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             G  P +     L   +C+ +D   +A V+LE LEK
Sbjct: 581 EKGLTPCEVTRVTLAYEYCKIDD-GCSAMVVLERLEK 616



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/337 (21%), Positives = 127/337 (37%), Gaps = 38/337 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  +   Y   +K   A     +M++ G  P   +    +     +   + A      
Sbjct: 344 LTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNV 403

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SPNV T N ++   CK G ++ A +V K+    G      TY  LIS HC +  
Sbjct: 404 MNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAE 463

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIF-------------------------------- 341
           +  A+   N M K+GIQP++ ++ TLI                                 
Sbjct: 464 IKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTS 523

Query: 342 ---GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
              G+C++G L  A + F  M     + + +TY  LI+G  +    +    LY+ M+  G
Sbjct: 524 MICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKG 583

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +    +T   L    CK      A  +++ L+K   V   +T   L+   C  +    A 
Sbjct: 584 LTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNT---LVRKLCSERKVGMAA 640

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
             +  ++      N+      M+   ++  +D  +++
Sbjct: 641 LFFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVSDL 677



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 97/240 (40%), Gaps = 7/240 (2%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D+  + + +L   +  + + + A   F +M   G  P I S    ++     +R+  +  
Sbjct: 445 DADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEM 504

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F++E  R  + P   T   ++  +C+ G +  A++ F  M   G      TY  LISG C
Sbjct: 505 FFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLC 564

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  L  A    + M + G+ P  +T  TL + +CK      A  +   ++       V 
Sbjct: 565 KQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYCKIDDGCSAMVVLERLEK---KLWVR 621

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           T NTL+          M A  + ++L     V+ +T  A +    +  K      LV DL
Sbjct: 622 TVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYD----LVSDL 677



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 35/224 (15%)

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           ++  F + G++ EA  +  EM    ++P+  T N ++    ++G  E   +L++EM   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++                                   PN  +Y  ++ G C   N   + 
Sbjct: 198 VQ-----------------------------------PNCVSYRVMVVGYCKLGNVLESD 222

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +    MI  G   +     +++  FC+     RA        E  + P+ I  + +  GL
Sbjct: 223 RWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGL 282

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
              G  + A ++  +M  RG  P  +     I+   + G  E  
Sbjct: 283 CKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKA 326


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 20/340 (5%)

Query: 197 DLLFKTYAHR-KKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +L  K+ +H  K   +A D F  M R   F   ++ CNK +   +   R D+A+  Y++M
Sbjct: 74  ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKM 132

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----- 309
              RI  N+Y+ N+++  FC    +  ++  F  +  +GF P V T+NTL+ G C     
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192

Query: 310 -----------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
                        G L     F  ++E  G+ P VITFNTLI G C +G++ EA  + ++
Sbjct: 193 SEALALFGYMVETGFLEAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNK 251

Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
           M    +  +VVTY T++NG  ++G+++   +L  +M    IK D++ Y+A+I  LCK+G 
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
              A YL  ++ +  + PN  TY+ +I G C       A +L + MI     P+   F  
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           L+S   +      A ++  EML +C+ PD++  + +  G 
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 46/387 (11%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL------- 248
           F++L K +    K   +  TF ++   GF P + + N  L  L   +R+  AL       
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203

Query: 249 --GF------YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             GF      + +M    ++P V T N +++  C  G +  A  +   M   G    V T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           Y T+++G C  G    A+   + ME+  I+P+V+ ++ +I   CK G   +A  +FSEM 
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              ++PNV TYN +I+G+   G       L  +M+   I  D+LT+NALI    KEGK  
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITG-------------------------------QC 449
           +A  L  ++    + P+  TY+++I G                                C
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             K  +   QL + + R G   N   +  L+  FC+ ++ + A ++  EM+   + PD+I
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEI 536
             + L  G     K E A++LF  +++
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQM 530



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 35/337 (10%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + EM    I+PNV+T N ++  FC  G    A  + ++M      P V T+N LIS   
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS---- 365
            +G L  A K  + M    I P+ +T+N++I+GFCK  +  +A  +F  M + +V     
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437

Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                                       N  TYNTLI+G+ +V N      L++EM+ +G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  D +T N L+ G C+  K ++A  L + +  + +  +   Y+ +I G C     + A+
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+ S+   G  P+   + +++S FC       A  +  +M +    PD+   + L  G 
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617

Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
              G+ + +++L  +M   G     F    TI  A E
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF----TIKMAEE 650



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +S+ +   ++  A     EM    I P+  T N +++ FCK    + A  +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           F  M S    P V T+NT+I  +C    +   M+    + + G+  N  T+NTLI GFC+
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
              L+ A  +F EM +  V P+ +T N L+ G+ +    E    L+E +  + I +D + 
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN +I G+CK  K  +A  L   L  + + P+  TY+ +I+G C +     A  L+  M 
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            +G  P+   +  L+    +  + D++ E++ EM     + D+  +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 4/295 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L F+ L        K   A     +M      P   + N  +       R D A    K 
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SP+V T N ++  +C+   ++  +++ + +   G + + TTYNTLI G C    
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L+ A      M  +G+ P+ IT N L++GFC+  KL EA  +F  ++ + +  + V YN 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+G  +    +    L+  +  +G++ D+ TYN +I G C +     A  L   +  N 
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
             P+ STY+ LI G       +++ +L   M  +G   +    +M     C+  D
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 6/245 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    + FD    +FD       M     + F+ +   Y   K+         ++ 
Sbjct: 406 SMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +    + + ++ A   ++EM  + + P+  T N++++ FC+   +E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E+F+ ++          YN +I G C    +  A      +  +G++P+V T+N +I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            GFC K  + +AN +F +MK     P+  TYNTLI G  + G  +    L  EM  NG  
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639

Query: 401 VDILT 405
            D  T
Sbjct: 640 GDAFT 644



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 19/254 (7%)

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+ F + M ++      +  N +I  F +  +   A  ++ +M+   +  N+ ++N 
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA----AYLVK-- 427
           LI  +          S + ++ + G + D++T+N L+ GLC E +  +A     Y+V+  
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 428 ---------DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
                     + +  L P   T++ LI G C+      A  L   M+  G   +   +  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           +++  C+  D   A  +L +M E  + PD +I S +   L   G    A  LF +M  +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 539 LLPKGFDKLRTINC 552
           + P  F    T NC
Sbjct: 327 IAPNVF----TYNC 336


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/326 (30%), Positives = 165/326 (50%), Gaps = 6/326 (1%)

Query: 156  FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNAT 213
             +S   ++ G+L S+  +   +LF+ +    +   + P    ++LL   +   K+     
Sbjct: 796  LESYNCLMDGLLGSNFTEKALELFEDM----KSAGTHPNNFTYNLLLDAHGKSKRINKLY 851

Query: 214  DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
            D + +MR  G  P   + N  +S+L+ S  ++ AL  Y E+     SP   T   ++   
Sbjct: 852  DLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGL 911

Query: 274  CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
             K G  E+A+++F+ M   G  P+   YN LI+G    G +  A +    M K GI+P++
Sbjct: 912  LKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDL 971

Query: 334  ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
             ++  L+   C  G++ EA + F E+K T + P+ V+YN +ING G+    +   SL+ E
Sbjct: 972  KSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSE 1031

Query: 394  MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            M   GI  D+ TYNALIL L   GK   A  + ++L    L P+  TY+ALI G  +  N
Sbjct: 1032 MKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGN 1091

Query: 454  SERAFQLYKSMIRSGCRPNKHIFEML 479
             ++AF ++K M+  GC PN   F  L
Sbjct: 1092 KDQAFSVFKKMMVVGCSPNTETFAQL 1117



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 169/374 (45%), Gaps = 10/374 (2%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           +Y+Y +C           +     ++  +A   F +M D G  P + +    + +L  + 
Sbjct: 270 IYTYTIC----------IRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAG 319

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           ++D A   Y +MR +  SP+  T   +M  F K+G +E     +  ME  G+ P V TY 
Sbjct: 320 KLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYT 379

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            LI   C  G +  A    ++M   GI PN+ T+NT+I G  K  +L EA  +   M++ 
Sbjct: 380 ILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESL 439

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P   +Y   I+ YG+ G+       +E M + GI   I   NA +  L + G+  +A
Sbjct: 440 GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEA 499

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +  DL K  L P++ TY+ L+         ++A QL   MI  GC P+  I   L++T
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINT 559

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
             +    D A ++   +    +AP  +  + L +GL   GK   A++LF  M   G  P 
Sbjct: 560 LYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPN 619

Query: 543 GFDKLRTINCAPEN 556
                  ++C  +N
Sbjct: 620 TITFNSLLDCLSKN 633



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 155/329 (47%), Gaps = 6/329 (1%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           K+F N      +M   G+ P + +    + +L  S  VD A      M    I PN++T 
Sbjct: 360 KRFWN------EMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTY 413

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++    K   ++ A+E+ +NMES+G  P+  +Y   I  +   G  + A+     M+K
Sbjct: 414 NTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKK 473

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            GI P++   N  ++   + G++ EA  IF+++    +SP+ VTYN L+  Y + G  + 
Sbjct: 474 RGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDK 533

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
              L  EM+  G + D++  N+LI  L K G+   A  +   L    L P   TY+ L+T
Sbjct: 534 ATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLT 593

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G        +A +L+ SM  SGC PN   F  L+    +N+  D A ++   M      P
Sbjct: 594 GLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNP 653

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKME 535
           D +  + +  GL   G+ + A   F +M+
Sbjct: 654 DVLTYNTIIYGLIREGRIDYAFWFFHQMK 682



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 160/351 (45%), Gaps = 10/351 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L      R   R   +   +M+  G  P I +    + +L  + R+D A G +KEM 
Sbjct: 238 YSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMD 297

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+V T  +++ A C  G +++A E++  M +    P   TY TL+      G L 
Sbjct: 298 DEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLE 357

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
              +F N ME +G  P+V+T+  LI   CK G +  A  +   M    + PN+ TYNT+I
Sbjct: 358 TVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMI 417

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G  +    +    L E M   G+K    +Y   I    K G   KA    + + K  ++
Sbjct: 418 CGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIM 477

Query: 436 P-----NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           P     NAS Y+   TG+        A  ++  + + G  P+   + MLM  + +    D
Sbjct: 478 PSIAACNASLYTLAETGRI-----SEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +A ++L EM+ K   PD +I++ L + L+  G+ + A K+F +++   L P
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAP 583



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 163/332 (49%), Gaps = 9/332 (2%)

Query: 214  DTFCQMRDYGFLPIIES-CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
            ++ CQ  D+  LP+I+  C +     LD++ V     F K  +   I P + + N +M  
Sbjct: 754  NSVCQ-DDHVMLPLIKVLCKR--KKALDAQNV-----FDKFTKNLGIHPTLESYNCLMDG 805

Query: 273  FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
                   E+A+E+F++M+S G  P+  TYN L+  H     ++      + M   G +PN
Sbjct: 806  LLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPN 865

Query: 333  VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
             IT N +I    K   L++A  ++ E+ + + SP   TY  LI+G  + G SE    ++E
Sbjct: 866  AITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFE 925

Query: 393  EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
            EML  G   + + YN LI G  K G+   A  L K + K  + P+  +Y+ L+   C+  
Sbjct: 926  EMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITG 985

Query: 453  NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
              + A Q ++ +  +G  P+   +  +++   ++   D A  +  EM  + ++PD    +
Sbjct: 986  RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYN 1045

Query: 513  ELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             L   L   GK ++A+K++ ++++ GL P  F
Sbjct: 1046 ALILHLGIAGKVDVAVKMYEELQLVGLEPSVF 1077



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 173/392 (44%), Gaps = 16/392 (4%)

Query: 182 ILYSYRMCDSSPLVFDLL---------------FKTYAHRKKFRNATDTFCQMRDYGFLP 226
           IL   R  +    VFDL+               FK  + +     A     +M + GF+ 
Sbjct: 140 ILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFIL 199

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              S N  +  LL     + AL  YK M    + P++ T + +M A  + G   + + + 
Sbjct: 200 NAYSYNGLIHLLLPG-FCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLL 258

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + M+S+G  P++ TY   I        +  A      M+  G  P+VIT+  LI   C  
Sbjct: 259 EEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAA 318

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
           GKL +A  ++ +M+A++ SP+ VTY TL++ +G+VG+ E     + EM  +G   D++TY
Sbjct: 319 GKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTY 378

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             LI  LCK G   +A  ++  +    + PN  TY+ +I G    +  + A +L ++M  
Sbjct: 379 TILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMES 438

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G +P    + + +  + ++ D  +A +    M ++ + P     +     L   G+   
Sbjct: 439 LGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISE 498

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           A  +F  +   GL P        + C  + G+
Sbjct: 499 AEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 143/306 (46%), Gaps = 5/306 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + L    Y        A DTF  M+  G +P I +CN  L +L ++ R+  A   + ++ 
Sbjct: 448 YVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLH 507

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  +SP+  T NM+M  + K G I++A ++   M S G  P V   N+LI+     G + 
Sbjct: 508 KCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVD 567

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K    ++   + P V+T+N L+ G  K+GK+ +A  +F  M  +   PN +T+N+L+
Sbjct: 568 AAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLL 627

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   +    ++   ++  M       D+LTYN +I GL +EG+   A +    + K  L 
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLS 686

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGC-RPNKHIFEMLMSTFCQNEDFDRA-- 492
           P+  T   LI G       E A ++    +   C + N   +  LM       + + A  
Sbjct: 687 PDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS 746

Query: 493 -AEVLL 497
            AE+L+
Sbjct: 747 FAEILV 752



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 160/339 (47%), Gaps = 5/339 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + +L +          A D    M   G  P + + N  +  LL + R+D AL   + 
Sbjct: 376 VTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLEN 435

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P  ++  + +  + K G   +A++ F+ M+  G +PS+   N  +      G 
Sbjct: 436 MESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGR 495

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +S A    N + K G+ P+ +T+N L+  + K G++ +A ++ SEM +    P+V+  N+
Sbjct: 496 ISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINS 555

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LIN   + G  +    ++  +    +   ++TYN L+ GL KEGK  KA  L   + ++ 
Sbjct: 556 LINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESG 615

Query: 434 LVPNASTYSALITGQCVRKNS--ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             PN  T+++L+   C+ KN   + A +++  M    C P+   +  ++    +    D 
Sbjct: 616 CPPNTITFNSLL--DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDY 673

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           A     +M +K ++PD + L  L  G+   G+ E A+K+
Sbjct: 674 AFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKV 711



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 178/450 (39%), Gaps = 84/450 (18%)

Query: 189 CDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           C  SP  + +++L K Y+   +   AT    +M   G  P +   N  +++L  + RVD 
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS--------- 297
           A   +  ++  +++P V T N+++    K G I +A+E+F +M   G  P+         
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628

Query: 298 --------------------------VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
                                     V TYNT+I G   +G +  A  F + M+K  + P
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSP 687

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           + +T  TLI G  + G++ +A ++  E +    +  N   +  L+         E   S 
Sbjct: 688 DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISF 747

Query: 391 YEEMLRN------------------------------------GIKVDILTYNALILGLC 414
            E ++ N                                    GI   + +YN L+ GL 
Sbjct: 748 AEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLL 807

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
               T+KA  L +D+      PN  TY+ L+      K   + + LY  M   GC PN  
Sbjct: 808 GSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAI 867

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
              +++S   ++ + ++A ++  E++    +P       L  GL   G+ E AMK+F +M
Sbjct: 868 THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927

Query: 535 ---------EIRGLLPKGFDKLRTINCAPE 555
                     I  +L  GF K   I+ A E
Sbjct: 928 LDYGCGPNSVIYNILINGFGKSGEIDFACE 957



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 2/221 (0%)

Query: 162  ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
            ++ G+L +   +   K+F+ +L  Y  C  + +++++L   +    +   A + F +M  
Sbjct: 907  LIDGLLKAGRSEQAMKIFEEML-DYG-CGPNSVIYNILINGFGKSGEIDFACELFKKMVK 964

Query: 222  YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             G  P ++S    +  L  + R+D A+ +++E++   + P+  + N +++   K   ++ 
Sbjct: 965  EGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDE 1024

Query: 282  AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            A+ +F  M++ G  P + TYN LI      G + +A+K    ++  G++P+V T+N LI 
Sbjct: 1025 ALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIR 1084

Query: 342  GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            G    G   +A  +F +M     SPN  T+  L N Y + G
Sbjct: 1085 GHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 70/143 (48%)

Query: 208  KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
            +   A   F +++  G  P   S N  ++ L  S R+D AL  + EM+   ISP++YT N
Sbjct: 986  RIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYN 1045

Query: 268  MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
             ++      G ++ AV++++ ++ +G  PSV TYN LI GH   G    A      M   
Sbjct: 1046 ALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVV 1105

Query: 328  GIQPNVITFNTLIFGFCKKGKLH 350
            G  PN  TF  L   + + G +H
Sbjct: 1106 GCSPNTETFAQLPNKYPRAGLVH 1128


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 35/360 (9%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C++ D G +P + + N  +  L  +ER D A   +KEM    + PN  T  +++HA CK 
Sbjct: 327 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 386

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA------------------- 317
           G+IE A+ +F  M   G   +V  YN+LI+G+C +G L  A                   
Sbjct: 387 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 446

Query: 318 ----------------MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
                           M+    M + GI  N  TF  LI GFCK  K+ EA R+F +M  
Sbjct: 447 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 506

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +NV PN VT+N +I GY  VGN      LY++M+  G+K D  TY +LI GLC      K
Sbjct: 507 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 566

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   V DL+ +  V N  + +AL+ G          + L+  M   G + +   F +++ 
Sbjct: 567 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 626

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +  D +++  +  EM E+ + PD I  + +   L        A+  + +M + G  P
Sbjct: 627 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 686



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 178/387 (45%), Gaps = 2/387 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  IL  ++    F L   LFD +L S    D    V+    + Y   +    A     
Sbjct: 165 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDE--YVYTAGIRAYCESRNLDGARGLVV 222

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G        N  +  L  + RV  A+     M    ++ +  T   +++ FC++ 
Sbjct: 223 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 282

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+ +  +M  +GF+PS    + +I     K L+  A      +   G+ PNV  +N
Sbjct: 283 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 342

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +  +A+R+F EM    + PN VTY  LI+   + G  E    L+++M   
Sbjct: 343 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 402

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIKV +  YN+LI G CK+G   +A  L+  + K  L P A++YS LI G C   +    
Sbjct: 403 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 462

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L++ M   G   N + F  L++ FC+++  D AA +  +M++  + P+ +  + +  G
Sbjct: 463 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 522

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G    A +L+ +M   GL P  +
Sbjct: 523 YCLVGNIRKAFQLYDQMVEMGLKPDNY 549



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 13/349 (3%)

Query: 204 AHRKKFRNATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERVDIALGF 250
           A    +R     FC+M +              GF+P   +C+  +  L   E V+ A   
Sbjct: 266 ADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 325

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++    + PNV+  N ++   CK    + A  +FK M   G  P+  TY  LI   C 
Sbjct: 326 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 385

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G++  A+   + M   GI+  V  +N+LI G+CK+G L  A  + S M    ++P   +
Sbjct: 386 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 445

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ LI G  + G+      L+ EM   GI  +  T+ ALI G CK+ K  +AA L   + 
Sbjct: 446 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 505

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            ++++PN  T++ +I G C+  N  +AFQLY  M+  G +P+ + +  L+S  C      
Sbjct: 506 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 565

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +A E + ++       ++  L+ L  G    G+      L+ +M +RG+
Sbjct: 566 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 38/393 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D  ++LFD ++ S  +   + + F+++ + Y      R A   + QM 
Sbjct: 483 ALINGFCKDKKMDEAARLFDKMIDSNVI--PNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540

Query: 221 DYGFLPI----------------IESCNKFLSSLLDSERV-------DIALGFYKEMRRN 257
           + G  P                 +   N+F++ L +S  V        +  GF++E R  
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600

Query: 258 R------------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                        +  ++ +  ++++A  K    E++  +F+ M+  G  P    Y  +I
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                +  +  A+   + M  +G  PN +T   LI   CK G L  A  +  EM A NV 
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TYN  ++ +   G+ E    L+  ML+ G    I+++N LI GLCK GK ++A  L
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 779

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  + ++   P+  +YS +I   C   +  +AF+L+  M+  G +P+   + + +     
Sbjct: 780 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 839

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + + D+A  +   M+   + P+      L SG+
Sbjct: 840 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 3/309 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++     +++D A   + +M  + + PN  T N+++  +C +G I +A +++  M  MG
Sbjct: 484 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 543

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY +LISG C    +S A +F   +E +    N  +   L++GF ++G+  E  
Sbjct: 544 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 603

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++ EM    V  ++V++  ++    +  + E    L+ EM   G+K D + Y  +I  L
Sbjct: 604 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 663

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            KE    +A      +  +   PN  T++ LI   C       A  L K M+     PNK
Sbjct: 664 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 723

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII-LSELYSGLHHCGKDELAMKLFR 532
             +   +  F    D ++A ++   ML+  +A  SI+  + L  GL   GK + A+ L  
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMS 781

Query: 533 KMEIRGLLP 541
           K+   G  P
Sbjct: 782 KITESGFSP 790



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 165/366 (45%), Gaps = 18/366 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L K           RG+++ D+  L  K+ D      +    +   ++ L  
Sbjct: 375 TYAILIHALCK-----------RGMIE-DALCLFDKMRD------KGIKVTVYPYNSLIN 416

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y  +     A      M   G  P   S +  ++ L  +  +   +  ++EM    I+ 
Sbjct: 417 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 476

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT   +++ FCK   ++ A  +F  M     IP+  T+N +I G+C  G +  A +  
Sbjct: 477 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 536

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P+  T+ +LI G C    + +AN   ++++ +    N  +   L+ G+ + 
Sbjct: 537 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 596

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L++EM   G+K+D++++  ++    K+   +K+  L +++ +  + P+   Y
Sbjct: 597 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 656

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I      +N  +A   +  M+  G  PN     +L++  C++     A  +  EML 
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 716

Query: 502 KCMAPD 507
             + P+
Sbjct: 717 GNVLPN 722


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 169/354 (47%), Gaps = 3/354 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           SS  V+D+L +      +   A +   ++      P   +C+  +  L  + RVD AL  
Sbjct: 337 SSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSL 396

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES--MGFIPSVTTYNTLISGH 308
            + M +    P++ T +M+++  CK   I+ A E  + M+        S  +YN+L++  
Sbjct: 397 LETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSL 456

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C    +  A   F  ++ +    P+V++++ LI GFCK  +L  A +++ +M   N  PN
Sbjct: 457 CKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPN 516

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V TYN  +NG  + G       +YEEM+  G   D++TY+ LI G     K  +A  L +
Sbjct: 517 VTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFE 576

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +      PNA TY+ L+ G C     + A +L++ M+  GC P++  +  L+  FC   
Sbjct: 577 TMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVG 636

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++A EV  EM+ K   PD +  + L  G    GK   A +LF+ M  R   P
Sbjct: 637 KIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKP 690



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 146/288 (50%), Gaps = 1/288 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +    +   A   + QM D   +P + + N FL+ L+   R+  A G Y+EM 
Sbjct: 485 YSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMV 544

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               SP+V T + ++H F      ++A E+F+ M S G  P+  TYN L+ G C +    
Sbjct: 545 AAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPD 604

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M + G  P+ +T+ TL++GFC  GK+ +A  +F EM +    P+VV YN L+
Sbjct: 605 EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLL 664

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SL 434
            G+ + G       L++ M+    K D +++N +I GL K  +   A  + + ++++   
Sbjct: 665 KGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGC 724

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
            P+  TY++LI G C  +    A +++K + R    P+ H F +L+  
Sbjct: 725 SPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 135/296 (45%), Gaps = 2/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           AL F++ ++      +V+T N ++    +   +++A +VF+ M + G +P+  TY  L+ 
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +     A++F   M   G +P+   +  +       GK  E +R+F       V+ 
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAV 232

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            ++    L+  +     +   + L+  M+++G K D   Y+ ++L  CK     +A  L 
Sbjct: 233 EMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLF 292

Query: 427 KDLDKNSLVP-NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
            ++   S  P N   ++A ++G C     E+AF+  ++M  S    ++ +++ML+    +
Sbjct: 293 LEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIE 351

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +   D+A E  LE+  + + P S     +   L   G+ + A+ L   M  RG  P
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCP 407



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 119/307 (38%), Gaps = 37/307 (12%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L  L+    +  A   +++M    + PN +T  +++ + C     + AV  F  M  
Sbjct: 133 NCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVD 192

Query: 292 MGFIPSVTTYNTL--------------------------ISGHCNKGLLS---------L 316
            GF PS T Y  +                          +     K LL           
Sbjct: 193 KGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIE 252

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP-NVVTYNTLI 375
           A K    M K+G +P+   ++ ++   CK   L EA ++F EM   + +P N V +   +
Sbjct: 253 ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFL 312

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G  + G  E        M +  +      Y+ LI  L + G+  KA     ++   ++ 
Sbjct: 313 SGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P++ T  ++I   C     + A  L ++MI+ G  P+     ML++  C+ +    A E 
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 496 LLEMLEK 502
           L  M  K
Sbjct: 432 LQGMDRK 438



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 36/221 (16%)

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           EA   F  ++A N   +V TYN L++   +  + +    ++E+M+  G+  +  TY  L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS---------------------------- 442
              C E  + +A     ++      P+++ Y                             
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 443 -------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
                  AL+    ++  +  A +L+++M++SGC+P+  I+  ++   C+ E+ D A ++
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 496 LLEMLEKCMAP-DSIILSELYSGLHHCGKDELAMKLFRKME 535
            LEM  +  AP +++  +   SGL   GK E A +  R M+
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ 332



 Score = 42.7 bits (99), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 60/119 (50%), Gaps = 4/119 (3%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-R 220
           +L+G   +       +LF  ++   R C    +  +++    +  K+  +A + F +M +
Sbjct: 663 LLKGFFRAGKPGEAKQLFQVMVS--RQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 720

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           D+G  P + + N  +  L   +R+  A+  +KE+ R ++SP+ +  N+++ A  K GI+
Sbjct: 721 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI-KCGIV 778


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 175/354 (49%), Gaps = 9/354 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L  +   R +   A     +M      P + + +  +  L    +V  A+  YKE
Sbjct: 327 ILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  NRI PN +  + ++   C+ G++  A   F ++      P VT YN +I G+   G 
Sbjct: 387 MCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGD 446

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++    +    I P+++TFN+LI+GFCK  K+ EA R+   +K   + P+ VTY T
Sbjct: 447 VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT 506

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+N Y + GN      L  EM    I+  ++TY  +I GLCK+ K +++  L++D+    
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P+  TY+ +I   C  K+  +AF+L   M+     P    + +L+   C+  D + A 
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGFD 545
            VL+ + ++ +    +  + +     HC  G  + A+K+F +M     + KGF+
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKA--HCVKGDAQRAVKVFHQM-----VEKGFE 673



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 177/377 (46%), Gaps = 36/377 (9%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   FC M  YG LP   S N  +  L+ +  ++ AL    +M +  + P++ T  +V  
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263

Query: 272 AFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            F  LG++  A E+ + M    G  P + TY  LI GHC  G +  A++ +  +  +G Q
Sbjct: 264 GFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQ 323

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
            NVI ++ L+   CK+G++ EA ++  EM+A N+ P++VTY+ LI+G  + G  +    L
Sbjct: 324 LNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQL 383

Query: 391 YEEMLRNGI-----------------------------------KVDILTYNALILGLCK 415
           Y+EM  N I                                   + D+  YN +I G  K
Sbjct: 384 YKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVK 443

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G  ++A  L K L   ++ P+  T+++LI G C  +    A +L +S+   G  P+   
Sbjct: 444 LGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVT 503

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  LM+ +C+  + ++  E+LLEM  K + P  +  + +  GL    K E +++L   M 
Sbjct: 504 YTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMR 563

Query: 536 IRGLLPKGFDKLRTINC 552
            +GL P        I C
Sbjct: 564 AKGLAPDQITYNTIIQC 580



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 231/485 (47%), Gaps = 14/485 (2%)

Query: 77  QDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPS 136
           Q+ DFV   Y    H    +     + ++ F V HVL + ++   L L     +Q    S
Sbjct: 41  QNADFVADFY----HLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVAS 96

Query: 137 SLTLETHSIVLHILTKNRK--FKSSESILRGILDSD-SFDLPSKLFDSILYSYRMCDSSP 193
            +  +   +++ +  +N +   ++  S+L  +  +D  +D+ + + DS   + +   +S 
Sbjct: 97  RMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDS--GTPQSARTSS 154

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++ D L      + +FR+A     Q     F P + S N  +S        D+A  F+  
Sbjct: 155 IIVDGL----CGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCM 210

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +  I P+ Y+ N+++H     G +E A+E+  +ME  G  P + TY  +  G    GL
Sbjct: 211 MLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGL 270

Query: 314 LSLAMKF-KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +S A +  + ++   G++P+++T+  LI G C+ G + EA R+  ++ ++    NV+ Y+
Sbjct: 271 MSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYS 330

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            L++   + G  +    L  EM  N ++ D++TY+ LI GLCK+GK ++A  L K++  N
Sbjct: 331 VLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFN 390

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + PN+  +S ++ G C +     A   + S+I S  RP+  ++ +++  + +  D + A
Sbjct: 391 RIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEA 450

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
             +   + +K + P  +  + L  G     K   A +L   +++ GL P        +N 
Sbjct: 451 VRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 553 APENG 557
             E G
Sbjct: 511 YCEEG 515



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 151/297 (50%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V+ A+  YK +R   I+P++ T N +++ FCK   +  A  + ++++  G  PS  TY T
Sbjct: 447 VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT 506

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           L++ +C +G ++   +    M    I+P V+T+  +I G CK+ KL E+ ++  +M+A  
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           ++P+ +TYNT+I  + +  +      L ++ML + ++    TYN LI GLC+ G  + A 
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDAD 626

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++  L   ++      Y+ +I   CV+ +++RA +++  M+  G   +   +  +++  
Sbjct: 627 RVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRL 686

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           C+    + A      ML   ++PD  I   + +  H  G      +L   M   GLL
Sbjct: 687 CKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLL 743



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 175/404 (43%), Gaps = 24/404 (5%)

Query: 117 QKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK----------------NRKFKSS- 159
           Q D  L L +       +P    L T+SI++H L K                NR F +S 
Sbjct: 341 QVDEALQLLYEMEANNLQPD---LVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 160 --ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
               IL+G+ +          FDS++ S    D +  +++++   Y        A   + 
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVT--LYNIMIDGYVKLGDVEEAVRLYK 455

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++RD    P I + N  +     + +V  A    + ++ + + P+  T   +M+A+C+ G
Sbjct: 456 RLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEG 515

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            I +  E+   M      P+V TY  +I G C +  L  +++    M   G+ P+ IT+N
Sbjct: 516 NINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYN 575

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I  FCK   + +A  +  +M   N+ P   TYN LI+G  + G+ E    +   +   
Sbjct: 576 TIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
            I +  + Y  +I   C +G  ++A  +   + +     +   YSA+I   C R     A
Sbjct: 636 NINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEA 695

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
              +  M+  G  P++ IFEM+++ F +        E+L  M++
Sbjct: 696 KYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIK 739



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 94/215 (43%), Gaps = 2/215 (0%)

Query: 190 DSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           D  P V  + ++ K    ++K   +      MR  G  P   + N  +     ++ +  A
Sbjct: 531 DIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKA 590

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
                +M  + + P   T N+++   C+ G +E A  V  +++      +   Y T+I  
Sbjct: 591 FELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKA 650

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           HC KG    A+K  + M + G + ++  ++ +I   CK+  ++EA   F  M +  VSP+
Sbjct: 651 HCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPD 710

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
              +  ++N + + G+      L   M++ G+  D
Sbjct: 711 QEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745


>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
          Length = 583

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 143/263 (54%)

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           N + PN  T  ++++ FCK+G +E A  +  +M+  G   +   +NT+I G+C KG++  
Sbjct: 311 NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 370

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+K K  MEK G++ ++ T+NTL  G C+  +L EA  +   M    V PN VTY TLI+
Sbjct: 371 ALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLIS 430

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + + G+      L+ EM   G    ++TYN +I G  K+G  ++A    K+++K   VP
Sbjct: 431 IHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVP 490

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++L+ G CV    + A +L++ M + G  PN   +  L+S   +    + A ++ 
Sbjct: 491 DVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLY 550

Query: 497 LEMLEKCMAPDSIILSELYSGLH 519
            +ML+  + PD  + S L   LH
Sbjct: 551 DDMLKAGLIPDDSLYSALVGSLH 573



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 178/384 (46%), Gaps = 2/384 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  ++ G+  S   D   +L D +         + L ++ L   Y  +K      +   
Sbjct: 179 AASVVVDGLCKSGRVDDARRLLDDM--PRHGVSLNALCYNSLLDCYVRQKDDGRVQEILE 236

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            M + G    + +    + SL  +  +      + EM+ N +  +VY    V++A+C+ G
Sbjct: 237 IMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAG 296

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + RA +V       G  P+  TY  LI+G C  G +  A      M+  G+  N I FN
Sbjct: 297 NMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFN 356

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I G+C+KG + +A +I + M+   V  ++ TYNTL  G  +V   +   +L   M+  
Sbjct: 357 TMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEM 416

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+  + +TY  LI   CK+G   +A  L +++ +    P+  TY+ +I G   + +   A
Sbjct: 417 GVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREA 476

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +  K M + G  P+ + +  L+   C N   D A ++  EM ++   P+ +  + L SG
Sbjct: 477 ERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISG 536

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ E A +L+  M   GL+P
Sbjct: 537 LAKEGRSEAAFQLYDDMLKAGLIP 560



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 149/311 (47%), Gaps = 4/311 (1%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I   V T  +++ +      I +   +F  M++   +  V  Y  +I+ +C  G 
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A K  +    NG++PN  T+  LI GFCK G++  A  + ++M+   V  N + +NT
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY + G  +    +   M + G+++DI TYN L  GLC+  +  +A  L+  + +  
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +VPN  TY+ LI+  C   +   A +L++ M   G  P+   + +++  + +      A 
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
               EM +K   PD    + L  G  HC  GK ++A+KLF +M+ RG  P        I+
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHG--HCVNGKVDVALKLFEEMKQRGTEPNVVAYTALIS 535

Query: 552 CAPENGEKESG 562
              + G  E+ 
Sbjct: 536 GLAKEGRSEAA 546



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F+ +   Y  +    +A      M   G    I + N     L    R+D A      
Sbjct: 353 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 412

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T   ++   CK G +  A  +F+ M   G  PSV TYN +I G+  KG 
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGS 472

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +F+  MEK G  P+V T+ +L+ G C  GK+  A ++F EMK     PNVV Y  
Sbjct: 473 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 532

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           LI+G  + G SE    LY++ML+ G+  D   Y+AL+
Sbjct: 533 LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 569



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 54/115 (46%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++++   Y  +   R A     +M   GF+P + +    +     + +VD+AL  +
Sbjct: 456 SVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 515

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           +EM++    PNV     ++    K G  E A +++ +M   G IP  + Y+ L+ 
Sbjct: 516 EEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 570


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 163/328 (49%), Gaps = 14/328 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTF------CQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
            V+  L   Y    K   A + F      C+     +  +I++C+K             A
Sbjct: 156 FVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSK-------GGDYPTA 208

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++EM    +SP+  T N ++ A  +    E    +F  ME  G      TYNTLI+ 
Sbjct: 209 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 268

Query: 308 HCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           +C  G + L       M K+ GI+P+VIT++T+I G+ K G  HEA  +F EM+  NV P
Sbjct: 269 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 328

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + + YNT+++ + ++GN +   S+   M   G   DI+TYNAL+    K+GK ++A  L+
Sbjct: 329 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 388

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ +    PN  TYSALI   C       A  L++ + ++G +P+  ++  L+   C+N
Sbjct: 389 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKN 448

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSEL 514
              D A  +L EM +  + P+ I  + L
Sbjct: 449 GSPDEALALLEEMADNGIRPNVITYNSL 476



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 162/350 (46%), Gaps = 7/350 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L        ++      F +M + G      + N  +++     ++ +     + 
Sbjct: 225 ITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMET 284

Query: 254 MRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           M ++  I P+V T + ++  + KLG+   A+ +F+ M +    P    YNT++  H   G
Sbjct: 285 MAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLG 344

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
               A   +  ME+ G   +++T+N L+  + K+GK  EA  +  EMK    SPN++TY+
Sbjct: 345 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 404

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+ Y + G      +L++++ + G++ D++ Y+ L+ G CK G   +A  L++++  N
Sbjct: 405 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 464

Query: 433 SLVPNASTYSALITG---QC--VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + PN  TY++L+     QC  VRK   +        +    +P+    +  +    Q +
Sbjct: 465 GIRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQ 524

Query: 488 DFD-RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
                AA V  EM +  + P+ +  S + +   HC   E A  L   M +
Sbjct: 525 ALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRV 574



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 2/274 (0%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++ +  +LG  + A  +F      GF  +V  Y++LI  +   G L+ A++    M K  
Sbjct: 126 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVV 184

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
            +PN++ +N +I    K G    A RIF EM    +SP+ +T+NTLI+  G+    E   
Sbjct: 185 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 244

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV-PNASTYSALITG 447
            ++ EM   GI  D +TYN LI   C+ G+    A L++ + K+S + P+  TYS +I G
Sbjct: 245 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDG 304

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                 +  A  L++ M      P+   +  ++    +  +FD A  +   M E   A D
Sbjct: 305 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKD 364

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + L       GK   AM L  +M+ RG  P
Sbjct: 365 IVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP 398



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 4/210 (1%)

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           +T+I    + G+   A  IF          NV  Y++LI  YG+ G       ++E M +
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 182

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
              K +++ YNA+I    K G    A  + +++ +  + P+  T++ LI+        E 
Sbjct: 183 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC--MAPDSIILSEL 514
             +++  M   G   +   +  L++T+C+       A  L+E + K   + P  I  S +
Sbjct: 243 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGA-ALMETMAKSSGIEPSVITYSTM 301

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             G    G    A+ LF++M  + + P G 
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNVEPDGI 331



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 105/258 (40%), Gaps = 45/258 (17%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L  +Y  + KFR A     +M+  G  P I + +  + +         A+  +++
Sbjct: 366 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 425

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +++  + P+V   + ++   CK G  + A+ + + M   G  P+V TYN+L+  +  + L
Sbjct: 426 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCL 485

Query: 314 ------------------------------------------LSLAMKFKNLMEKNGIQP 331
                                                     L+ A  F+  M KNG++P
Sbjct: 486 MVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFRE-MAKNGVKP 544

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+TF++++        + +A+ +   M+  +     VT+  L+    +V       +L+
Sbjct: 545 NVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLMGFRIRVWRD--AETLF 602

Query: 392 EEMLRNGIKVDILTYNAL 409
            E+   G    +  YNAL
Sbjct: 603 NELTTLGHNTAVAFYNAL 620


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 164/338 (48%), Gaps = 13/338 (3%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR------IS 260
           +  +   +   +M      P + +    ++ L  + R+D AL  +  +R         + 
Sbjct: 295 RDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVE 354

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI--PSVTTYNTLISGHCNKGLLSLAM 318
           P+V   N ++   CK+G  E  + + + M+ MG I  P+  TYN LI G    G    A 
Sbjct: 355 PDVVLFNTLIDGLCKVGKEEDGLSLLEEMK-MGNINRPNTVTYNCLIDGFFKAGNFDRAH 413

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M + G+QPNVIT NTL+ G CK G++H A   F+EMK   +  N  TY  LI+ +
Sbjct: 414 ELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAF 473

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
             V N       +EEML +G   D + Y +LI GLC  G+   A+ +V  L       + 
Sbjct: 474 CGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDR 533

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           S Y+ LI+G C +K  ER ++L   M  +G +P+   +  L+S   +  DF  A++V+ +
Sbjct: 534 SCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEK 593

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
           M+++ + P  +    +     +C K  +   MK+F +M
Sbjct: 594 MIKEGLRPSVVTYGAIIHA--YCSKKNVDEGMKIFGEM 629



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 160/333 (48%), Gaps = 1/333 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L   +     F  A + F QM + G  P + + N  +  L    RV  A+ F+ E
Sbjct: 394 VTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNE 453

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+   +  N  T   ++ AFC +  I RA++ F+ M S G  P    Y +LISG C  G 
Sbjct: 454 MKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGR 513

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    + ++  G   +   +N LI GFCKK KL     + +EM+ T V P+ +TYNT
Sbjct: 514 MNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+  G+ G+    + + E+M++ G++  ++TY A+I   C +    +   +  ++   S
Sbjct: 574 LISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTS 633

Query: 434 LV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            V PN   Y+ LI   C   + +RA  L + M     RPN   +  ++      +   +A
Sbjct: 634 KVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKA 693

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            E++  M+E+   PD I +  L   L   G+ E
Sbjct: 694 FELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 156/332 (46%), Gaps = 8/332 (2%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C MR  G +    SCN  L+ L     +        EM + +I P+V T  ++++  CK 
Sbjct: 271 CVMRLGGAVDA-ASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKA 329

Query: 277 GIIERAVEVFKNMES------MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI- 329
             I+ A++VF  +        +G  P V  +NTLI G C  G     +     M+   I 
Sbjct: 330 RRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNIN 389

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +PN +T+N LI GF K G    A+ +F +M    V PNV+T NTL++G  + G       
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            + EM   G+K +  TY ALI   C      +A    +++  +   P+A  Y +LI+G C
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLC 509

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           +      A  +   +  +G   ++  + +L+S FC+ +  +R  E+L EM E  + PD+I
Sbjct: 510 IAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTI 569

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + L S L   G    A K+  KM   GL P
Sbjct: 570 TYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 139/354 (39%), Gaps = 46/354 (12%)

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII---ERAVEVFK 287
           C+  L  LL S R   AL    EM +     +V T  +V     + G        V +  
Sbjct: 177 CHGLLRVLLKSGRAGDALHVLDEMPQANSGFSV-TGEIVFGELVRSGRSFPDGEVVGLVA 235

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            +   G  P       L+   C      +A +  + + + G   +  + N L+    +  
Sbjct: 236 KLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGR 295

Query: 348 KLHEANRIFSEMKATNVSPNVVTY------------------------------------ 371
            +   N + +EM+   + P+VVT+                                    
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355

Query: 372 -----NTLINGYGQVGNSEMGASLYEEMLRNGI-KVDILTYNALILGLCKEGKTKKAAYL 425
                NTLI+G  +VG  E G SL EEM    I + + +TYN LI G  K G   +A  L
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHEL 415

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
            + +++  + PN  T + L+ G C      RA + +  M   G + N   +  L+S FC 
Sbjct: 416 FRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCG 475

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             + +RA +   EML    +PD+++   L SGL   G+   A  +  K+++ G 
Sbjct: 476 VNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF 529



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/266 (23%), Positives = 111/266 (41%), Gaps = 5/266 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC-NKFL 235
           + F+ +L S   C    +V+  L        +  +A+    +++  GF  +  SC N  +
Sbjct: 484 QCFEEMLSSG--CSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGF-SLDRSCYNVLI 540

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           S     ++++       EM    + P+  T N ++    K G    A +V + M   G  
Sbjct: 541 SGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLR 600

Query: 296 PSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           PSV TY  +I  +C+K  +   MK F  +   + + PN + +N LI   C+   +  A  
Sbjct: 601 PSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  +MK   V PN  TYN ++ G            L + M+    + D +T   L   L 
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLS 720

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNAST 440
             G+ +K  + V+    +S   ++ T
Sbjct: 721 AVGEIEKLKHFVEGYQDSSYPASSQT 746


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 164/317 (51%), Gaps = 1/317 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVE 284
           P I   N  +   +   R+D A     +M  +  I P+V T N +++ + K G++  A+E
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V  +M + G  P+V +Y  L+ G C  G +  A    N M  +G++PN + FN LI  FC
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+ ++ EA  IF EM      P+V T+N+LI+G  +V   +    L  +M+  G+  + +
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TYN LI    + G+ K+A  LV ++       +  TY++LI G C     ++A  L++ M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           +R G  P+     +L++  C++   + A E   EM+ +   PD +  + L +GL   G+ 
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 525 ELAMKLFRKMEIRGLLP 541
           E  + +FRK++  G+ P
Sbjct: 651 EDGLTMFRKLQAEGIPP 667



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 163/338 (48%), Gaps = 1/338 (0%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERV 244
           YR+     ++F+ L   +    +  +A      M   YG +P + + N  +        V
Sbjct: 346 YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLV 405

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +AL    +MR     PNVY+  +++  FCKLG I+ A  V   M + G  P+   +N L
Sbjct: 406 GLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL 465

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           IS  C +  +  A++    M + G +P+V TFN+LI G C+  ++  A  +  +M +  V
Sbjct: 466 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 525

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N VTYNTLIN + + G  +    L  EM+  G  +D +TYN+LI GLC+ G+  KA  
Sbjct: 526 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARS 585

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L + + ++   P+  + + LI G C     E A +  K M+  G  P+   F  L++  C
Sbjct: 586 LFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 645

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           +    +    +  ++  + + PD++  + L S L   G
Sbjct: 646 RAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 214/493 (43%), Gaps = 62/493 (12%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
           +TPF++ + LL++  +   S+E F+W  +      + + + +++  L  N +FK+ + +L
Sbjct: 76  ITPFQL-YKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLL 134

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKF-RNATDTFCQMRD- 221
             + D +       LF SI+  Y                   +  F    T    +MR+ 
Sbjct: 135 IQMKD-EGIVFKESLFISIMRDY------------------DKAGFPGQTTRLMLEMRNV 175

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           Y   P  +S N  L  L+      +A   + +M   +I P ++T  +VM AFC +  I+ 
Sbjct: 176 YSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDS 235

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           A+ + ++M   G +P+   Y TLI     CN+  ++ A++    M   G  P+  TFN +
Sbjct: 236 ALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR--VNEALQLLEEMFLMGCVPDAETFNDV 293

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY------EE 393
           I G CK  +++EA ++ + M     +P+ +TY  L+NG  ++G  +    L+      E 
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEI 353

Query: 394 MLRN--------------------------GIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           ++ N                          GI  D+ TYN+LI G  KEG    A  ++ 
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+      PN  +Y+ L+ G C     + A+ +   M   G +PN   F  L+S FC+  
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFD 545
               A E+  EM  K   PD    + L SGL  C  DE+  A+ L R M   G++     
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGL--CEVDEIKHALWLLRDMISEGVVANTVT 531

Query: 546 KLRTINCAPENGE 558
               IN     GE
Sbjct: 532 YNTLINAFLRRGE 544



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 144/296 (48%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    MR+ G  P + S    +       ++D A     EM  + + PN    N ++ 
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLIS 467

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           AFCK   I  AVE+F+ M   G  P V T+N+LISG C    +  A+     M   G+  
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVA 527

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N +T+NTLI  F ++G++ EA ++ +EM       + +TYN+LI G  + G  +   SL+
Sbjct: 528 NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF 587

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+MLR+G     ++ N LI GLC+ G  ++A    K++      P+  T+++LI G C  
Sbjct: 588 EKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
              E    +++ +   G  P+   F  LMS  C+      A  +L E +E    P+
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 205/480 (42%), Gaps = 63/480 (13%)

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF---------------DSIL 183
           T +++++VL IL      K + ++   +L   S  +P  LF               DS L
Sbjct: 181 TFKSYNVVLEILVSGNCHKVAANVFYDML---SRKIPPTLFTFGVVMKAFCAVNEIDSAL 237

Query: 184 YSYR-----MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
              R      C  + +++  L  + +   +   A     +M   G +P  E+ N  +  L
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
              +R++ A      M     +P+  T   +M+  CK+G ++ A ++F  +      P +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEI 353

Query: 299 TTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIF---------------- 341
             +NTLI G    G L  A     +++   GI P+V T+N+LI+                
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413

Query: 342 -------------------GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
                              GFCK GK+ EA  + +EM A  + PN V +N LI+ + +  
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
                  ++ EM R G K D+ T+N+LI GLC+  + K A +L++D+    +V N  TY+
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            LI     R   + A +L   M+  G   ++  +  L+   C+  + D+A  +  +ML  
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             AP +I  + L +GL   G  E A++  ++M +RG  P        IN     G  E G
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDG 653



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 145/303 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   + +L   +    K   A +   +M   G  P     N  +S+     R+  A+
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             ++EM R    P+VYT N ++   C++  I+ A+ + ++M S G + +  TYNTLI+  
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G +  A K  N M   G   + IT+N+LI G C+ G++ +A  +F +M     +P+ 
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 599

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++ N LING  + G  E      +EM+  G   DI+T+N+LI GLC+ G+ +    + + 
Sbjct: 600 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 659

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+  T++ L++  C       A  L    I  G  PN   + +L+ +    E 
Sbjct: 660 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQET 719

Query: 489 FDR 491
            DR
Sbjct: 720 LDR 722


>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
 gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
 gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
          Length = 642

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 1/315 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ + +        + A   F  M+  G +P   + N  +  LL   R   A+G  + M 
Sbjct: 246 FNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRME 305

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + P V T   V+    + G ++ A +V + ME  G   +   Y+T+I+G C  G + 
Sbjct: 306 REGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEID 365

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K    M  + ++PNV+ ++ +I G    GK+ EA  +F EM  +  +PN++TY ++I
Sbjct: 366 CALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSII 425

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY ++G++    S++EEM+  G   + ++Y+ LI GLC  G+ K A  + K +      
Sbjct: 426 QGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCA 485

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P+   Y+++I G CV    +   +L+  M+ SG   P+   + +L+      +D  RA +
Sbjct: 486 PDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMD 545

Query: 495 VLLEMLEKCMAPDSI 509
           +L  ML++   PD++
Sbjct: 546 LLNRMLDQGCDPDTV 560



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           E+ N  L ++L +  V  A   +  M+     P   T N+++H     G    A+ V + 
Sbjct: 244 EAFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRR 303

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ME  G +P V TY  ++ G    G +  A K    ME+NG+  N   ++T+I GFCK G+
Sbjct: 304 MEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGE 363

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A +++  M A+ V PNVV Y+ +I G    G       L+ EM+ +    +I+TY +
Sbjct: 364 IDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGS 423

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I G  K G T +A  + +++     VPNA +YS LI G C     + A  ++K M+  G
Sbjct: 424 IIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRG 483

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-PDSIILSELYSGLHHCGKDELA 527
           C P+   +  ++   C +   D    +  +ML    A PD I  + L  GL        A
Sbjct: 484 CAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRA 543

Query: 528 MKLFRKMEIRGLLP 541
           M L  +M  +G  P
Sbjct: 544 MDLLNRMLDQGCDP 557



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 2/299 (0%)

Query: 244 VDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +D+AL    E+     ++P+ +T + V+ A    G ++ AV +   M + G + +   +N
Sbjct: 189 LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAEAFN 247

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++      G +  A K    M+  G  P   T+N L+ G    G+   A  +   M+  
Sbjct: 248 PVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMERE 307

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P V+TY  +++G  + G  +    + EEM RNG+  +   Y+ +I G CK G+   A
Sbjct: 308 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCA 367

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             + + +  + + PN   YSA+I G         A  L++ MI S C PN   +  ++  
Sbjct: 368 LKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQG 427

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  D  RA  V  EM+     P+++  S L +GL + G+ + AM +++ M  RG  P
Sbjct: 428 YFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAP 486



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 136/300 (45%), Gaps = 11/300 (3%)

Query: 252 KEMRR--NRISPNVYTLNMVMHAFCKLGI-------IERAVEVFKNM-ESMGFIPSVTTY 301
           + +RR   R++P + + N+++   C   +       ++ A+ +   +       P   TY
Sbjct: 153 RSLRRFPGRLAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTY 212

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           +T++S   + G +  A+   + M  +G+      FN ++    + G +  A ++F  M+ 
Sbjct: 213 STVVSALADAGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAAKLFGFMQL 271

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               P   TYN L++G    G +     +   M R G+   ++TY A++ GL + G+ K 
Sbjct: 272 KGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKD 331

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  + +++++N L  N   YS +ITG C     + A +++++M+ S  RPN  ++  ++ 
Sbjct: 332 AWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIG 391

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                     A  +  EM+    AP+ I    +  G    G    A+ ++ +M   G +P
Sbjct: 392 GLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVP 451



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 19/229 (8%)

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            ++EM  ++ +PN+ T   ++  + K+G   RA+ V++ M   G +P+  +Y+ LI+G C
Sbjct: 405 LFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLC 464

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT-NVSPNV 368
           N G L  AM     M   G  P+ I + ++I G C  G +    R+F +M A+ +  P+V
Sbjct: 465 NVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDV 524

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN------------------ALI 410
           ++YN L++G     +      L   ML  G   D +T N                   L+
Sbjct: 525 ISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGERKGREFLEGLV 584

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + LC   +   A  ++  +    +VP A  +  ++   C RK   R   
Sbjct: 585 VRLCDRRRNMAAGEVLMVMLAKYIVPEAPIWEMVVRDVCRRKRVWRVID 633



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 3/167 (1%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LF  +++S   C  + + +  + + Y        A   + +M   G +P   S +  ++ 
Sbjct: 405 LFREMIHSK--CAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILING 462

Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI-P 296
           L +  R+  A+  +K M     +P+      ++   C  G+++  + +F +M + G   P
Sbjct: 463 LCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADP 522

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            V +YN L+ G      L  AM   N M   G  P+ +T N  +  F
Sbjct: 523 DVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREF 569


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 161/296 (54%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F +M + G  P + + +  + SL    RV+ AL  +  M+   ISPN++T N ++ 
Sbjct: 29  AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQ 88

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C       A  +   M S+  +P++ T++ LI+  C +G +  A      M + G++P
Sbjct: 89  GLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEP 148

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+T+++L+ G+  + ++ EA ++F  M      P+V +YN LINGY +         L+
Sbjct: 149 NVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLF 208

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            EM+  G+  DI++YN LI GLC+ G+ ++A  L K++  N  +P+  TYS L+ G C +
Sbjct: 209 NEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 268

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
               +AF+L+++M  +  +PN  ++ +L+   C++ +   A ++  E+  + + P+
Sbjct: 269 GYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 155/293 (52%), Gaps = 3/293 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + +  +  +    ++   A D F  M+  G  P I + N  +  L +  R   A 
Sbjct: 41  CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 100

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    I PN+ T +++++ FCK G +  A  V K M  MG  P+V TY++L++G+
Sbjct: 101 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 160

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +  +  A K  ++M   G +P+V ++N LI G+CK  ++ EA ++F+EM    ++P++
Sbjct: 161 SLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 220

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V+YNTLI+G  Q+G       L++ ML NG   D+ TY+ L+ G CK+G   KA  L + 
Sbjct: 221 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 280

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN-KH--IFEM 478
           +    L PN   Y+ LI   C  +N + A +L+  +   G +PN KH  +FE+
Sbjct: 281 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLFEI 333



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 158/319 (49%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P + +    ++ L        A G +K+M      P+V T + ++ + CK   +  A
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 64

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           +++F  M++ G  P++ TYN+LI G CN      A    N M    I PN++TF+ LI  
Sbjct: 65  LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 124

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCK+G + EA  +   M    V PNVVTY++L+NGY           L++ M+  G K D
Sbjct: 125 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPD 184

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           + +YN LI G CK  +  +A  L  ++    L P+  +Y+ LI G C       A  L+K
Sbjct: 185 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 244

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
           +M+ +G  P+   + +L+  FC+     +A  +   M    + P+ ++ + L   +    
Sbjct: 245 NMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR 304

Query: 523 KDELAMKLFRKMEIRGLLP 541
             + A KLF ++ ++GL P
Sbjct: 305 NLKEARKLFSELFVQGLQP 323



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 138/253 (54%)

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M + G+ P V TY T+I+G C  G    A      M + G QP+V+T++T+I   CK  +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           ++EA  IFS MKA  +SPN+ TYN+LI G          +++  EM+   I  +I+T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI   CKEG   +A  ++K + +  + PN  TYS+L+ G  ++     A +L+  MI  G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C+P+   + +L++ +C+ +    A ++  EM+ + + PD +  + L  GL   G+   A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 529 KLFRKMEIRGLLP 541
            LF+ M   G LP
Sbjct: 241 DLFKNMLTNGNLP 253


>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
 gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
          Length = 760

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 163/328 (49%), Gaps = 14/328 (4%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTF------CQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
            V+  L   Y    K   A + F      C+     +  +I++C+K             A
Sbjct: 157 FVYSSLICAYGRSGKLAKAVEIFEAMKVVCKPNLVVYNAVIDACSK-------GGDYPTA 209

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++EM    +SP+  T N ++ A  +    E    +F  ME  G      TYNTLI+ 
Sbjct: 210 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 269

Query: 308 HCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           +C  G + L       M K+ GI+P+VIT++T+I G+ K G  HEA  +F EM+  NV P
Sbjct: 270 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + + YNT+++ + ++GN +   S+   M   G   DI+TYNAL+    K+GK ++A  L+
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 389

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++ +    PN  TYSALI   C       A  L++ + ++G +P+  ++  L+   C+N
Sbjct: 390 EEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKN 449

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSEL 514
              D A  +L EM +  + P+ I  + L
Sbjct: 450 GSPDEALALLEEMADNGIRPNVITYNSL 477



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 163/350 (46%), Gaps = 7/350 (2%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F+ L        ++      F +M + G      + N  +++     ++ +     + 
Sbjct: 226 ITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMET 285

Query: 254 MRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           M ++  I P+V T + ++  + KLG+   A+ +F+ M +    P    YNT++  H   G
Sbjct: 286 MAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLG 345

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
               A   +  ME+ G   +++T+N L+  + K+GK  EA  +  EMK    SPN++TY+
Sbjct: 346 NFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYS 405

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            LI+ Y + G      +L++++ + G++ D++ Y+ L+ G CK G   +A  L++++  N
Sbjct: 406 ALIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADN 465

Query: 433 SLVPNASTYSALITG---QC--VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + PN  TY++L+     QC  VRKN  +        +    +P+    +  +    Q +
Sbjct: 466 GIRPNVITYNSLLDAYGRQCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQ 525

Query: 488 DFD-RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
                AA V  EM +  + P+ +  S + +   HC   E A  L   M +
Sbjct: 526 ALVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASSLLEAMRV 575



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 2/274 (0%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
           ++ +  +LG  + A  +F      GF  +V  Y++LI  +   G L+ A++    M K  
Sbjct: 127 IISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-KVV 185

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
            +PN++ +N +I    K G    A RIF EM    +SP+ +T+NTLI+  G+    E   
Sbjct: 186 CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEECD 245

Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV-PNASTYSALITG 447
            ++ EM   GI  D +TYN LI   C+ G+    A L++ + K+S + P+  TYS +I G
Sbjct: 246 RIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDG 305

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
                 +  A  L++ M      P+   +  ++    +  +FD A  +   M E   A D
Sbjct: 306 YAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKD 365

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  + L       GK   AM L  +M+ RG  P
Sbjct: 366 IVTYNALLDSYGKQGKFREAMSLLEEMKQRGASP 399



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 4/210 (1%)

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           +T+I    + G+   A  IF          NV  Y++LI  YG+ G       ++E M +
Sbjct: 125 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAM-K 183

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
              K +++ YNA+I    K G    A  + +++ +  + P+  T++ LI+        E 
Sbjct: 184 VVCKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 243

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC--MAPDSIILSEL 514
             +++  M   G   +   +  L++T+C+       A  L+E + K   + P  I  S +
Sbjct: 244 CDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGA-ALMETMAKSSGIEPSVITYSTM 302

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             G    G    A+ LF++M  + + P G 
Sbjct: 303 IDGYAKLGLAHEAIALFQEMRNQNVEPDGI 332



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/258 (19%), Positives = 105/258 (40%), Gaps = 45/258 (17%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L  +Y  + KFR A     +M+  G  P I + +  + +         A+  +++
Sbjct: 367 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 426

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +++  + P+V   + ++   CK G  + A+ + + M   G  P+V TYN+L+  +  + L
Sbjct: 427 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGRQCL 486

Query: 314 ------------------------------------------LSLAMKFKNLMEKNGIQP 331
                                                     L+ A  F+  M KNG++P
Sbjct: 487 MVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFRE-MAKNGVKP 545

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+TF++++        + +A+ +   M+  +     VT+  L+    +V       +L+
Sbjct: 546 NVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGVTHGLLMGFRIRVWRD--AETLF 603

Query: 392 EEMLRNGIKVDILTYNAL 409
            E+   G    +  YNAL
Sbjct: 604 NELTTLGHNTAVAFYNAL 621


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 168/362 (46%), Gaps = 3/362 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L  + A   +   A + F  M      P + +    + SL    R+D  +  ++ M 
Sbjct: 103 FNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMT 162

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN++T + VMHAF   G ++ A ++F+ M   G  P   TYN LI      G L 
Sbjct: 163 AQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLE 222

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A  F   + K+    N +T+N+L+    +KG +     +F +MKA  +  N +TY  LI
Sbjct: 223 RAFDF---VGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILI 279

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
              G  G  E    LY EM+ N IK DI+T N ++  L K G+ + A  L +D+    L 
Sbjct: 280 ERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLN 339

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ LI G       + A  L   M  +GC PN   +  L+S++ +  +   A  +
Sbjct: 340 ADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRL 399

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
            LEM E+ +AP+ +  S L  G    G+ + A+ LFR+M+  G  P        I+C   
Sbjct: 400 FLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIR 459

Query: 556 NG 557
            G
Sbjct: 460 AG 461



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 124/239 (51%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           ++ + ++ L  +   +   +   + F QM+  G +    +    +  L  + RV+     
Sbjct: 235 TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQL 294

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           Y EM  N I  ++ T+N V+    K G +E A E+F++M+  G      TYN LI+G   
Sbjct: 295 YLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGR 354

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G L  A      ME+NG  PN+IT+NTLI  + K   L  A R+F EMK   V+PNVV+
Sbjct: 355 AGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVS 414

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           Y++LI G+G+ G ++   SL+ EM   G   + +TYN LI  L + G+   A   ++++
Sbjct: 415 YSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREM 473



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 161/370 (43%), Gaps = 5/370 (1%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           +D   +L +S+       D+   +F+ L   Y        A  T       G  P   + 
Sbjct: 11  YDDVQRLVESMQKDRTKLDTQ--LFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTY 68

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  +   +    V   L  YK+M + +  P+  T N+++ +  K   +E A  VF +M  
Sbjct: 69  SSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFK 128

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +   P V TY  LI      G +   MK    M   G QPN+ T+++++  F   G++ E
Sbjct: 129 LNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDE 188

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  IF +M    + P+ VTYN LI+ +G+ G  E     ++ + ++    + +TYN+L+ 
Sbjct: 189 ACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLS 245

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            L ++G  +    L   +    LV N  TY+ LI         E  +QLY  M+ +  + 
Sbjct: 246 SLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKY 305

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +      ++    +    + A E+  +M  K +  D++  + L +GL   GK + A  L 
Sbjct: 306 DIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALL 365

Query: 532 RKMEIRGLLP 541
            +ME  G  P
Sbjct: 366 LEMEENGCAP 375



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 147/337 (43%), Gaps = 32/337 (9%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           L+ L  + R D      + M+++R   +    N ++H + +  ++E+A++        G 
Sbjct: 2   LTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGG 61

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+  TY+++I      G +   +     M K    P+  TFN LI    K  ++ EA  
Sbjct: 62  RPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACN 121

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +F +M   NVSP+V TY  LI   G +G  +    L+E M   G + ++ TY++++    
Sbjct: 122 VFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFG 181

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALI-----TGQCVRK----NSERAF------- 458
             G+  +A  + + + +  L P+A TY+ LI     TGQ  R        R+F       
Sbjct: 182 SAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYN 241

Query: 459 ----------------QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
                           +L+  M   G   N+  + +L+         +   ++ LEM++ 
Sbjct: 242 SLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDN 301

Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +  D + ++ +   L   G+ E A +LF+ M+ +GL
Sbjct: 302 DIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGL 338



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 109/220 (49%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S+ L + +L +      +  +    + +M D      I + N  L  L  + RV+ A   
Sbjct: 270 SNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFEL 329

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           +++M+   ++ +  T N++++   + G ++ A  +   ME  G  P++ TYNTLIS +  
Sbjct: 330 FQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGK 389

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
              LS A +    M++ G+ PNV+++++LI GF K G+   A  +F EMKA    PN VT
Sbjct: 390 WSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVT 449

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           YN LI+   + G          EM   G ++  +T + L+
Sbjct: 450 YNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 70/155 (45%)

Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
           ++  ++  + +++L        K   A     +M + G  P I + N  +SS      + 
Sbjct: 335 FKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLS 394

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
            A   + EM+   ++PNV + + ++  F K G  + A+ +F+ M++ G  P+  TYN LI
Sbjct: 395 AATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLI 454

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                 G    AM++   M   G Q   +T + L+
Sbjct: 455 DCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLV 489



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 69/155 (44%)

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L E M ++  K+D   +N LI    +    +KA   +    K    P A TYS++I    
Sbjct: 17  LVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFM 76

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
              + +    +YK M+++   P+   F +L+ +  + +  + A  V  +M +  ++PD  
Sbjct: 77  KGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVY 136

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             + L   L   G+ +  MKLF  M  +G  P  F
Sbjct: 137 TYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLF 171


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 189/430 (43%), Gaps = 42/430 (9%)

Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL-----VFDLLF 200
           +LH L + R  + S      +L + S   PS L  + L  +R      L      F+LL 
Sbjct: 157 LLHSLRRRRGVRPSLQAANAVLSALSRS-PSTLPQASLDVFRSLIELRLHPNHYTFNLLV 215

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
            T+  +    +A  T   M+ +G  P   + N  L++      +  A      M+R+ I+
Sbjct: 216 HTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIA 275

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P   T N ++ AF +LG I++A +V ++M + GF P + TYN L  G C  G +  A + 
Sbjct: 276 PTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRL 335

Query: 321 KNLMEK------------------------------------NGIQPNVITFNTLIFGFC 344
           K+ ME+                                     G++P ++T N ++   C
Sbjct: 336 KDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLC 395

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K+GKL EA     ++    ++P+V+TYNTLI+ Y + GN     +L +EM+  G+K+D  
Sbjct: 396 KEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF 455

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           T N ++  LCK  + + A  L+    +   VP+  +Y  ++       N E A +L+  M
Sbjct: 456 TLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQM 515

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           I     P+   +  L+   C+ E    A + L E +EK + PD    + +       G  
Sbjct: 516 IERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDL 575

Query: 525 ELAMKLFRKM 534
           E A +   KM
Sbjct: 576 ENAFRFHNKM 585



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 177/390 (45%), Gaps = 40/390 (10%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERV--DIA 247
           +SPL  D     YA  +    A      +R   G  P +++ N  LS+L  S       +
Sbjct: 134 TSPLA-DAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  ++ +   R+ PN YT N+++H  C  G +  A+     M+  G  P   TYNTL++ 
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI--------------------------- 340
           HC KG+L  A      M+++GI P   T+NTL+                           
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 341 --------FGFCKKGKLHEANRIFSEMKATNVS-PNVVTYNTLINGYGQVGNSEMGASLY 391
                    G C+ GK+ EA R+  EM+    + P+VVTYNTL++   +   S     L 
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM   G+K  ++T+N ++  LCKEGK ++A   ++ + +  L P+  TY+ LI   C  
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N  +AF L   M+  G + +      ++   C+ + ++ A E+L    ++   PD +  
Sbjct: 433 GNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSY 492

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + +        E A++L+ +M  R L+P
Sbjct: 493 GTVMAAYFKEYNPEPALRLWDQMIERKLIP 522



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 173/403 (42%), Gaps = 36/403 (8%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD---------- 245
           ++ L   +A     + AT     M  YGF P + + N     L  + +VD          
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEME 340

Query: 246 --------------------------IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
                                      AL   +EMR   + P + T N+V+ + CK G +
Sbjct: 341 RLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A+   + +   G  P V TYNTLI  +C  G ++ A    + M   G++ +  T NT+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           ++  CK  +  +A  +          P+ V+Y T++  Y +  N E    L+++M+   +
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
              I TYN LI GLC+  + K+A   + +  +  LVP+ +TY+ +I   C   + E AF+
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            +  M+ +  +P+      LM+  C +   D+A ++    +EK    D I  + L   + 
Sbjct: 581 FHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMC 640

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             G  + A+  F  ME++GL P  F     ++   E G  E  
Sbjct: 641 KVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEA 683



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 135/310 (43%), Gaps = 35/310 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  +++ K+     K   A     ++ + G  P + + N  + +   +  V  A     E
Sbjct: 385 VTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDE 444

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF------------------- 294
           M    +  + +TLN V++  CK+   E A E+  +    GF                   
Sbjct: 445 MVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYN 504

Query: 295 ----------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
                           IPS++TYNTLI G C    L  A+   N   + G+ P+  T+N 
Sbjct: 505 PEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I  +CK+G L  A R  ++M   +  P+VVT NTL+NG    G  +    L+E  +  G
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKG 624

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            KVD++TYN LI  +CK G    A +   D++   L P+A TY+ +++       SE A 
Sbjct: 625 KKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAH 684

Query: 459 QLYKSMIRSG 468
            +   +  SG
Sbjct: 685 NMLHKLADSG 694



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 158/368 (42%), Gaps = 58/368 (15%)

Query: 127 FTWVQTHKPSSLTLETHSI--VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
           FT +       L ++T ++  VL+ L K ++++ +E +L           P + F     
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP--------PQRGFVPDEV 490

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           SY        V    FK Y      R     + QM +   +P I + N  +  L   ER+
Sbjct: 491 SYGT------VMAAYFKEYNPEPALR----LWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A+    E     + P+  T N+++HA+CK G +E A      M    F P V T NTL
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 305 ISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           ++G C  G L  A+K F++ +EK G + +VIT+NTLI   CK G +  A   F +M+   
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEK-GKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKG 659

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI----------------KVDIL--- 404
           + P+  TYN +++   + G SE   ++  ++  +G                 + D+    
Sbjct: 660 LQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHE 719

Query: 405 -----------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
                            TY   + GLC  G+ K+A  ++ ++ +  +  + STY  L+ G
Sbjct: 720 GKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779

Query: 448 QCVRKNSE 455
              R+  +
Sbjct: 780 LIKRQKRQ 787



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 114/264 (43%), Gaps = 36/264 (13%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L K     ++ + A D   +  + G +P   + N  + +      ++ A  F+ +M 
Sbjct: 527 YNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMV 586

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            N   P+V T N +M+  C  G +++A+++F++    G    V TYNTLI   C  G + 
Sbjct: 587 ENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVD 646

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF------------------- 356
            A+ F + ME  G+QP+  T+N ++    + G+  EA+ +                    
Sbjct: 647 TALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLK 706

Query: 357 ------SEMKATNVSPN-----------VVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
                 +++K     P            + TY   +NG    G  +   ++ +EM++ G+
Sbjct: 707 PSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGM 766

Query: 400 KVDILTYNALILGLCKEGKTKKAA 423
            VD  TY  L+ GL K  K +  A
Sbjct: 767 PVDCSTYITLMEGLIKRQKRQTHA 790


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 164/322 (50%), Gaps = 13/322 (4%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-------IIESCNKFLSSLLDSERVDIA 247
            F  L   Y        A   F  M++YG  P       +I++C K     ++ ++V   
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK---GGMEFKQV--- 323

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
             F+ EM+RN + P+  T N ++    + G+ E A  +F  M +      V +YNTL+  
Sbjct: 324 AKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDA 383

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G + LA +    M    I PNV++++T+I GF K G+  EA  +F EM+  N++ +
Sbjct: 384 ICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALD 443

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            V+YNTL++ Y +VG SE    +  EM   GIK D++TYNAL+ G  K+GK  +   +  
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFA 503

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ +  ++PN  TYS LI G       + A ++++    +G R +  ++  L+   C+N 
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNG 563

Query: 488 DFDRAAEVLLEMLEKCMAPDSI 509
               A  ++ EM ++ ++P+ +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVV 585



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 140/275 (50%), Gaps = 4/275 (1%)

Query: 172 FDLPSKLFDSILYSYRMC-DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIES 230
           F   +K FD +    R C     + F+ L    +    +  A + F +M +      + S
Sbjct: 320 FKQVAKFFDEM---QRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFS 376

Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N  L ++    ++D+A     +M   RI PNV + + V+  F K G  + A+ +F  M 
Sbjct: 377 YNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR 436

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
            +       +YNTL+S +   G    A+     M   GI+ +V+T+N L+ G+ K+GK  
Sbjct: 437 YLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYD 496

Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           E  ++F+EMK  +V PN++TY+TLI+GY + G  +    ++ E    G++ D++ Y+ALI
Sbjct: 497 EVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALI 556

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
             LCK G    A  L+ ++ K  + PN  TY+++I
Sbjct: 557 DALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 153/320 (47%), Gaps = 11/320 (3%)

Query: 229 ESCNKFLSSLLDSERVDIALGFY-----KEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           + C   +  L +    D A+GFY     +E R+N        +   +  + K+ I +R  
Sbjct: 197 DDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR-- 254

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +F+   S G+  +V  ++ LIS +   GL   A+   N M++ G++PN++T+N +I   
Sbjct: 255 -IFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA- 312

Query: 344 CKKGKLH--EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           C KG +   +  + F EM+   V P+ +T+N+L+    + G  E   +L++EM    I+ 
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQ 372

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ +YN L+  +CK G+   A  ++  +    ++PN  +YS +I G       + A  L+
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M       ++  +  L+S + +    + A ++L EM    +  D +  + L  G    
Sbjct: 433 GEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +   K+F +M+   +LP
Sbjct: 493 GKYDEVKKVFAEMKREHVLP 512



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 21/299 (7%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G   +  FD    LF  + Y     D   + ++ L   Y    +   A D   
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDR--VSYNTLLSIYTKVGRSEEALDILR 468

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G    + + N  L       + D     + EM+R  + PN+ T + ++  + K G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGG 528

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           + + A+EVF+  +S G    V  Y+ LI   C  GL+  A+   + M K GI PNV+T+N
Sbjct: 529 LYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           ++I  F +   + E +  +S   +   S + ++  T   G   +        L+ ++   
Sbjct: 589 SIIDAFGRSATM-ERSADYSNGGSLPFSSSALSELTETEGNRVI-------QLFGQLTSE 640

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYL--VKDLDKNSLVPNASTYSALITGQCVRKNS 454
           G        N  +   CKEG  + +  L   + + +  + PN  T+SA++   C R NS
Sbjct: 641 G--------NNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNA-CSRCNS 690



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 28/256 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  L   Y+    ++ A + F + +  G    +   +  + +L  +  V  A+    E
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH----- 308
           M +  ISPNV T N ++ AF +   +ER+ + + N  S+ F  S  +  T   G+     
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMERSAD-YSNGGSLPFSSSALSELTETEGNRVIQL 633

Query: 309 ---------------CNKGL--LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
                          C +G+  LS  ++    M +  I+PNV+TF+ ++    +     +
Sbjct: 634 FGQLTSEGNNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA-SLYEEMLRNGIKVDILTYNALI 410
           A+ +  E++  +     V +  L+   GQ  N  + A SL++++           YNAL 
Sbjct: 694 ASMLLEELRLFDNKVYGVVHGLLM---GQRENVWLQAQSLFDKVNEMDGSTASAFYNALT 750

Query: 411 LGLCKEGKTKKAAYLV 426
             L   G+ K+ A LV
Sbjct: 751 DMLWHFGQ-KRGAELV 765


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 211/474 (44%), Gaps = 36/474 (7%)

Query: 104 LTPFRVKHVL---LKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL-TKNRKFKSS 159
           L+ F V  +L    +   D  L+L FF W +    S  T+E+   ++HIL + N   K+ 
Sbjct: 58  LSQFNVMKILNDLFEESTDAALALYFFRWSEYCMGSKHTVESVCTMIHILVSGNMNHKAM 117

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           + +L  I  +   +    +F  I  ++        V+ +L   Y      + A    C+M
Sbjct: 118 DLLLHLISYNSGEEGWHNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKM 177

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
           R     P+I  CN  L +LL+SE++++A  F KEM+   +  N   +++ +  +C  G I
Sbjct: 178 RHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNI 237

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL--SLAMKFK---------------- 321
           +   ++   M+ +G  P V  Y  +I   C   LL  + ++ FK                
Sbjct: 238 DTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSV 297

Query: 322 --------------NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                         +++E   + PN+  FN+ I   C  G + +A ++F +M    + P+
Sbjct: 298 VDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPD 357

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
             +Y T++ GY +V +         +ML+ GI+  + TY  LI   CK G  + A YL +
Sbjct: 358 CFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQ 417

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +    LVP+  +Y+ L+ G   + + ++AF+L   M  +G  P+   + +L+    +  
Sbjct: 418 RMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRG 477

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + A ++L E+  +  +PD +  + +  G  + G  E A  LF  M    L P
Sbjct: 478 LVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEP 531



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 146/283 (51%)

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           +SPN++  N  +   C  G + +A +VF++M  MG IP   +Y T+++G+C    +S A+
Sbjct: 319 LSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNAL 378

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           K+   M K GI+P+V T+  LI   CK G +  A  +F  M    + P+VV+YNTL+NGY
Sbjct: 379 KYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGY 438

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G+ G+ +    L   M   G+  D++TYN LI GL K G   +A  ++ +L +    P+ 
Sbjct: 439 GKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDV 498

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            T++ +I G   + N E AF L+  M      P+      L++ +C+      A  +  +
Sbjct: 499 VTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHK 558

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ML+  +  D I+ + L  G    G  + A  L   M   G++P
Sbjct: 559 MLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMP 601



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 148/299 (49%), Gaps = 39/299 (13%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A   F  M + G +P   S    ++     + +  AL +  +M +  I P+V T  +++ 
Sbjct: 342 AAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLID 401

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           + CK G +E A  +F+ M + G +P V +YNTL++G+  KG L  A +  ++M   G+ P
Sbjct: 402 SCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSP 461

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE------ 385
           +++T+N LI G  K+G ++EA  I  E+     SP+VVT+  +I G+   GN E      
Sbjct: 462 DLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLF 521

Query: 386 ---------------------------MGAS--LYEEMLRNGIKVDILTYNALILGLCKE 416
                                      M  +  L+ +ML  G+K D++ YN+LI G C  
Sbjct: 522 FYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSL 581

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITG---QCVRKNSER-AFQLYKSMIRSGCRP 471
           G    A +LV  + ++ ++PN  T+ AL+ G   +CV    ER AF+L + +++ G + 
Sbjct: 582 GNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGIQA 640



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 147/292 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I   N F+S L     +  A   +++M    + P+ ++   +M  +CK+  I  A++ 
Sbjct: 321 PNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKY 380

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   G  PSV TY  LI   C  G + +A      M   G+ P+V+++NTL+ G+ K
Sbjct: 381 LGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGK 440

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           KG L +A  + S M++  VSP++VTYN LI+G  + G       + +E+ R G   D++T
Sbjct: 441 KGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVT 500

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +  +I G   +G  ++A  L   + ++ L P+  T SAL+ G C  +    A  L+  M+
Sbjct: 501 FTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKML 560

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +G + +  ++  L+  FC   + D A  ++  M+E  + P++I    L  G
Sbjct: 561 DAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLG 612



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 34/226 (15%)

Query: 353 NRIFSEMKATNVSPNVV--TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           + IF ++  T+    V+   Y  L+N Y +   +++   L  +M    I   I   N+L+
Sbjct: 134 HNIFLKIHETHTKRRVLETVYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLL 193

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
             L +  +   A   +K++    L  NAS  S  I+G C + N +  ++L   M   G +
Sbjct: 194 KALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIK 253

Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM-- 528
           P+   + +++ + C+      A  +L +M +  +  DS+ +S +  G    GK E AM  
Sbjct: 254 PDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDV 313

Query: 529 ------------------------------KLFRKMEIRGLLPKGF 544
                                         K+F+ M   GL+P  F
Sbjct: 314 LEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCF 359


>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
 gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
          Length = 491

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 205/443 (46%), Gaps = 26/443 (5%)

Query: 95  KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
           + L + +   TP  V  +L ++  D   +L+FF  +  H   S    ++   + I  + R
Sbjct: 56  QTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAIDISARLR 115

Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMC--DSSPLVFDLLFKTYAHRKKFRNA 212
                             D PS    S++Y  R      +P  F ++ + YA   K   A
Sbjct: 116 ------------------DSPS--LRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRA 155

Query: 213 TDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHA 272
              F  M  +G    ++S N  L  L  S+RV++A   +K  +  +   +  + N++++ 
Sbjct: 156 VKVFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFK-GKFRADCVSYNVMVNG 214

Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
           +C +    +A+E+ K M   G  P++T+YNT++ G+   G ++ A  F   M+K   + +
Sbjct: 215 WCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEID 274

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           VIT+ T+I GF   G++  A ++F  M    V P+V TYN  I    +  N +    ++E
Sbjct: 275 VITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFE 334

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM+  G   + +TYN +I GLC  G+ ++A   +  +  +   PN  TY+ +I   C   
Sbjct: 335 EMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEG 394

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC---QNEDFDRAAEVLLEMLEKCMAPDSI 509
             ++A  L++ M    C PN   + +L+S      +++D   A  +L+EM+++   P   
Sbjct: 395 EIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKF 454

Query: 510 ILSELYSGLHHCGKDELAMKLFR 532
             + + +GL   G    A ++ R
Sbjct: 455 TFNRVLNGLLLTGNQGFAKEILR 477


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 215/459 (46%), Gaps = 33/459 (7%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHS---IVLHILTKNRKFK 157
           S ++TP +V   L++ +KD   S+  F        +    +  S   +VL +++ N KFK
Sbjct: 11  SKNITPSQVIK-LMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSAN-KFK 68

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++E ++                  +      C  S  +   + + Y    +  ++   F 
Sbjct: 69  AAEDLI------------------VRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFH 110

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-L 276
           +M+D+   P  ++    L+ L++  ++++A  FYK MR   + P V +LN+++ A C+  
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++  +++F  M   G  P   TY TLISG C  G +  A K    M +    P V+T+
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            +LI G C    + EA R   EMK+  + PNV TY++L++G  + G S     L+E M+ 
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G + +++TY  LI GLCKE K ++A  L+  ++   L P+A  Y  +I+G C       
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMST-------FCQNEDFDRAAEVLLEMLEKCMAPDSI 509
           A      MI  G  PN+  + + + T        C N    RA  + L M  + ++ +  
Sbjct: 351 AANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVE 409

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP-KGFDKL 547
            L  L   L   G+ + A++L  ++   G +P KG  KL
Sbjct: 410 TLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKL 448



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 6/265 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R CD     +  L        +   A   F +M +    P + +    ++ L  S+ VD 
Sbjct: 186 RGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDE 245

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+ + +EM+   I PNV+T + +M   CK G   +A+E+F+ M + G  P++ TY TLI+
Sbjct: 246 AMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLIT 305

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +  +  A++  + M   G++P+   +  +I GFC   K  EA     EM    ++P
Sbjct: 306 GLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365

Query: 367 NVVTYNTLINGYGQVGNS------EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
           N +T+N  +    +V             +LY  M   GI V++ T  +L+  LCK+G+ +
Sbjct: 366 NRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQ 425

Query: 421 KAAYLVKDLDKNSLVPNASTYSALI 445
           KA  LV ++  +  +P+  T+  LI
Sbjct: 426 KAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score = 39.7 bits (91), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   Y  MR   IS  V TL  ++   CK G  ++AV++   + + G IPS  T+  LI 
Sbjct: 392 AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI- 450

Query: 307 GH 308
           GH
Sbjct: 451 GH 452


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 4/361 (1%)

Query: 185 SYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
           S R+C+S        +    ++  H  KF +A   FC M +   LP I   ++ L ++  
Sbjct: 32  SLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAK 91

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             + +  +  ++ +    IS ++Y+   ++  FC+   +  A+     M  +GF PS+ T
Sbjct: 92  LNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVT 151

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           + +L++G C+      AM   + +   G +PNV+ +NT+I   C+KG+++ A  +   MK
Sbjct: 152 FGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK 211

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              + P+VVTYN+LI      G   + A +  +M+R GI  D++T++ALI    KEG+  
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           +A     ++ + S+ PN  TY++LI G C+    + A ++   ++  G  PN   +  L+
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + +C+ +  D   ++L  M    +  D+   + LY G    GK   A K+  +M   G+ 
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391

Query: 541 P 541
           P
Sbjct: 392 P 392



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 162/351 (46%), Gaps = 4/351 (1%)

Query: 177 KLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           K  D++     M +S PL     F  L    A   K+      F  +   G    + S  
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +       R+ +AL    +M +    P++ T   +++ FC +     A+ +   +  +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+ P+V  YNT+I   C KG ++ A+     M+K GI+P+V+T+N+LI      G    +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            RI S+M    +SP+V+T++ LI+ YG+ G        Y EM++  +  +I+TYN+LI G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G   +A  ++  L      PNA TY+ LI G C  K  +   ++   M R G   +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
              +  L   +CQ   F  A +VL  M+   + PD    + L  GL   GK
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/306 (28%), Positives = 147/306 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +   + +   A D    M+  G  P + + N  ++ L  S    ++     +
Sbjct: 185 VIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  ISP+V T + ++  + K G +  A + +  M      P++ TYN+LI+G C  GL
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K  N++   G  PN +T+NTLI G+CK  ++ +  +I   M    V  +  TYNT
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L  GY Q G       +   M+  G+  D+ T+N L+ GLC  GK  KA   ++DL K+ 
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            V    TY+ +I G C     E A+ L+ S+   G  P+   +  +M    +   +  A 
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484

Query: 494 EVLLEM 499
           E+  +M
Sbjct: 485 ELYRKM 490



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 166/353 (47%), Gaps = 1/353 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L   + H  +F  A     Q+   G+ P +   N  + SL +  +V+ AL 
Sbjct: 146 EPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALD 205

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
             K M++  I P+V T N ++      G    +  +  +M  MG  P V T++ LI  + 
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A K  N M +  + PN++T+N+LI G C  G L EA ++ + + +    PN V
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTLINGY +    + G  +   M R+G+  D  TYN L  G C+ GK   A  ++  +
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               + P+  T++ L+ G C      +A    + + +S        + +++   C+ +  
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR-GLLP 541
           + A  +   +  K ++PD I    +  GL        A +L+RKM+   GL+P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 2/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L   +    +   A     +M   GF P I +    ++      R   A+    ++ 
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV   N ++ + C+ G +  A++V K+M+ MG  P V TYN+LI+   + G   
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           ++ +  + M + GI P+VITF+ LI  + K+G+L EA + ++EM   +V+PN+VTYN+LI
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG    G  +    +   ++  G   + +TYN LI G CK  +      ++  + ++ + 
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ L  G C       A ++   M+  G  P+ + F +L+   C +    +A  V
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKAL-V 415

Query: 496 LLEMLEKCMAPDSIILSE-LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            LE L+K      II    +  GL    K E A  LF  + ++G+ P
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 168/345 (48%), Gaps = 1/345 (0%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP-NVYTLNMVMHAF 273
            F  +   G  P   + NK + + + +  +  A+G  + M R+   P N ++ N+V+   
Sbjct: 151 AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 210

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
            + G    AVEVF  M     +P+  TYNT+I GH   G L    + ++ M  +G++PN 
Sbjct: 211 WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 270

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+N L+ G C+ G++ E + +  EM +  + P+  TY+ L +G  + G+S+   SL+ +
Sbjct: 271 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 330

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            L+NG+ +   T + L+ GLCK+GK   A  +++ L    LVP    Y+ LI G C    
Sbjct: 331 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 390

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E AF  +  M     +P+   +  L++  C+ E    A ++L+EM +  + P     + 
Sbjct: 391 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 450

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           L       G+ E    +  +M+  GL P        +N   +NG+
Sbjct: 451 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 495



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 155/292 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  + +  +N ++   YT +++++  CK G +  A EV +++ + G +P+   YNTLI+G
Sbjct: 325 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 384

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C  G L  A      M+   I+P+ IT+N LI G CK  ++  A  +  EM+   V+P 
Sbjct: 385 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 444

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG+ G  E    +  EM  NG+K ++++Y +++   CK GK  +A  ++ 
Sbjct: 445 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 504

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    ++PNA  Y+A+I        +++AF L + M  +G  P+   + +L+   C   
Sbjct: 505 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 564

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               A E++  +    + PD++  + L S   + G  + A+ L ++M   G+
Sbjct: 565 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 163/337 (48%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L        K   A +    + + G +P     N  ++    +  ++ A   + +M+  
Sbjct: 345 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 404

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+  T N +++  CK   I  A ++   M+  G  P+V T+NTLI  +   G L   
Sbjct: 405 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 464

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               + M++NG++PNV+++ +++  FCK GK+ EA  I  +M   +V PN   YN +I+ 
Sbjct: 465 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 524

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + G ++    L E+M  NGI   I+TYN LI GLC + +  +A  ++  L  + L+P+
Sbjct: 525 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 584

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           A +Y+ LI+  C R N ++A  L + M + G +     +  L+S        +    +  
Sbjct: 585 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQ 644

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +M++  + P + I + +       G +  A  L ++M
Sbjct: 645 KMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSY-------------- 186
           T SI+L+ L K+ K   +E +L+ ++++    +P++ ++++++  Y              
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGL--VPTRVIYNTLINGYCQTGELEGAFSTFG 399

Query: 187 ----RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
               R      + ++ L       ++  NA D   +M+D G  P +E+ N  + +   + 
Sbjct: 400 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 459

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +++       EM+ N + PNV +   +++AFCK G I  AV +  +M     +P+   YN
Sbjct: 460 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 519

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I  +   G    A      M+ NGI P+++T+N LI G C + ++ EA  I + +   
Sbjct: 520 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 579

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ V+YNTLI+     GN +    L + M + GIK  + TY+ LI GL   G+  + 
Sbjct: 580 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 639

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            YL + + +N++VP+ + ++ ++       N  +A  L K M++
Sbjct: 640 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 8/335 (2%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A + F +M +   LP   + N  +   +    ++       +M  + + PN  T N+++
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 277

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG----LLSLAMKFKNLMEK 326
              C+ G +     +   M S   +P   TY+ L  G    G    +LSL  K+     K
Sbjct: 278 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL----K 333

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           NG+     T + L+ G CK GK+  A  +   +    + P  V YNTLINGY Q G  E 
Sbjct: 334 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 393

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             S + +M    IK D +TYNALI GLCK  +   A  L+ ++  N + P   T++ LI 
Sbjct: 394 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 453

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                   E+ F +   M  +G +PN   +  +++ FC+N     A  +L +M  K + P
Sbjct: 454 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 513

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++ + + +       G ++ A  L  KM+  G+ P
Sbjct: 514 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 548


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 174/363 (47%), Gaps = 42/363 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +  +F  + + Y    K  +A   F +M++Y   P  +S     + L+   ++ +AL
Sbjct: 81  CNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLAL 140

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
            FY+ MR   I P+V +LN+++ A CK  G ++ A+ +F+ M + G  P   TY TLI+G
Sbjct: 141 RFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLING 200

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  A +    ME     P V+T+ +LI G C+   L  A R+  EM +  + PN
Sbjct: 201 LCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPN 260

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V TY++L++G+ + G S     L + M+      +++TY+ L+ GLCKEGK ++A  ++ 
Sbjct: 261 VFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILD 320

Query: 428 DLDKNSLVPNASTYSALITGQC------------------------------VR------ 451
            +    L P+A  Y  +I+G C                              VR      
Sbjct: 321 RMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVV 380

Query: 452 -----KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                ++  RAFQLY SM   G   +   F+ L++ FC   D  +AA ++ EM+     P
Sbjct: 381 QGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIP 440

Query: 507 DSI 509
           D +
Sbjct: 441 DEV 443



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 173/374 (46%), Gaps = 25/374 (6%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK----FLSSLLDSERVDI---AL 248
           F L+         FR A +  C+M++       E CN     FLS      RV     A+
Sbjct: 53  FSLMISRLVSANHFRLAEELLCRMKE-------EKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +++M+     P+  +   V         ++ A+  ++ M  MG  PSV + N LI   
Sbjct: 106 RVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKAL 165

Query: 309 C-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C N G +  A++    M   G  P+  T+ TLI G C+ GK+ EA  +F EM+    SP 
Sbjct: 166 CKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTY +LI+G  Q  + +    L EEM   GIK ++ TY++L+ G CK G + +A  L+ 
Sbjct: 226 VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +     +PN  TYS L+ G C     + A ++   M   G RP+  ++  ++S FC   
Sbjct: 286 MMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDIC 345

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-------AMKLFRKMEIRGLL 540
            F  AA  L EM+   ++P+ +  S L+  +H+     L       A +L+  M  RG+ 
Sbjct: 346 KFHEAANFLDEMVLGGISPNRLTWS-LHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGIS 404

Query: 541 --PKGFDKLRTINC 552
              K FD L    C
Sbjct: 405 IDAKTFDSLVNYFC 418



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 10/302 (3%)

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           +S + D   ++F  +    R C      +  L        K   A + F +M      P 
Sbjct: 168 NSGTMDAALRIFREM--PNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +    +  L  S+ +D A+   +EM    I PNV+T + +M   CK G   RA+E+  
Sbjct: 226 VVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M S   +P++ TY+TL+ G C +G L  A++  + M+  G++P+   +  +I GFC   
Sbjct: 286 MMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDIC 345

Query: 348 KLHEANRIFSEMKATNVSPNVVTY-------NTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           K HEA     EM    +SPN +T+       N ++ G     +      LY  M   GI 
Sbjct: 346 KFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGIS 404

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D  T+++L+   C +G   KAA+LV ++  +  +P+  T++A++     R+    + +L
Sbjct: 405 IDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAEL 464

Query: 461 YK 462
            +
Sbjct: 465 VQ 466


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/369 (30%), Positives = 176/369 (47%), Gaps = 41/369 (11%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LSSL++++     +  +K+   N  +P++ TLN++M+ FC L  I  A  V  N+  
Sbjct: 67  NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK 126

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK--- 348
            G+ P+  T NTLI G C +G +  A+ F + +   G Q N +++ TLI G CK G+   
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKA 186

Query: 349 --------------------------------LHEANRIFSEMKATNVSPNVVTYNTLIN 376
                                           L +A  ++SEM    +SPNVVTYN L+ 
Sbjct: 187 VARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +G+ +   SL  EM    I  D+ T+N LI  L KEGK K A  ++  + K  + P
Sbjct: 247 GFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKP 306

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++LI G       + A  ++ SM +SG  PN   +  ++   C+ +  D A  + 
Sbjct: 307 DVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLF 366

Query: 497 LEMLEKCMAPDSIILSELYSGL---HHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
            EM  K M PD +  + L  GL   HH    E A+ L +KM+ +G+ P  +     ++  
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHL---ERAIALCKKMKEQGIQPDVYSYTILLDAL 423

Query: 554 PENGEKESG 562
            + G  E+ 
Sbjct: 424 CKGGRLENA 432



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 163/343 (47%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            ++L   + H      A      +   G+ P   + N  +  L     +  AL F+ ++ 
Sbjct: 101 LNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVV 160

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                 N  +   +++  CK G  +    + + +E     P V  YNT+I   C   LL 
Sbjct: 161 AQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLG 220

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A    + M   GI PNV+T+N L++GFC  G L EA  + +EMK  N++P+V T+NTLI
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLI 280

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G  +    +   M++  IK D++TYN+LI G     K K A Y+   + ++ + 
Sbjct: 281 DALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVT 340

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY+ +I G C  K  + A  L++ M      P+   +  L+   C+N   +RA  +
Sbjct: 341 PNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIAL 400

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             +M E+ + PD    + L   L   G+ E A + F+++ ++G
Sbjct: 401 CKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKG 443



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 176/364 (48%), Gaps = 5/364 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + +  + L K    R + + A     Q+   GF     S    ++ L  +          
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +++  + + P+V   N ++H+ CK  ++  A +++  M   G  P+V TYN L+ G C  
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G L  A    N M+   I P+V TFNTLI    K+GK+  A  + + M    + P+VVTY
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N+LI+GY  +   +    ++  M ++G+  ++ TY  +I GLCKE    +A  L +++  
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
            +++P+  TY++LI G C   + ERA  L K M   G +P+ + + +L+   C+    + 
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGFDKLRT 549
           A E    +L K    +    + + +GL  C  D    AM L  KME +G +P      +T
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGL--CKADLFGEAMDLKSKMEGKGCMPDAI-TFKT 488

Query: 550 INCA 553
           I CA
Sbjct: 489 IICA 492



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 179/385 (46%), Gaps = 25/385 (6%)

Query: 182 ILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           + YS      +P V  +  +       K    A   F +M+    +P I +    +  L 
Sbjct: 330 VFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLC 389

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
            +  ++ A+   K+M+   I P+VY+  +++ A CK G +E A E F+ +   G+  +V 
Sbjct: 390 KNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQ 449

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYN +I+G C   L   AM  K+ ME  G  P+ ITF T+I    +K +  +A +I  EM
Sbjct: 450 TYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREM 509

Query: 360 KATN-----------------------VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            A                         + P+VVTY TL++GY  V   +    ++  M +
Sbjct: 510 IARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQ 569

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  ++  Y  +I GLCK+    +A  L +++   ++ PN  TY++LI   C   + ER
Sbjct: 570 MGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLER 629

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L K M   G +P+ + + +L+   C++   + A E+   +L K    +  + + + +
Sbjct: 630 AIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMIN 689

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
            L   G  + A+ L  KME +G +P
Sbjct: 690 ELCKAGLFDEALDLQXKMEDKGCMP 714



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 160/314 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  + SL  ++ +  A   Y EM    ISPNV T N +++ FC +G ++ A  +
Sbjct: 201 PDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSL 260

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M+     P V T+NTLI     +G +  A     +M K  I+P+V+T+N+LI G+  
Sbjct: 261 LNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFF 320

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             K+  A  +F  M  + V+PNV TY T+I+G  +    +   SL+EEM    +  DI+T
Sbjct: 321 LNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVT 380

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y +LI GLCK    ++A  L K + +  + P+  +Y+ L+   C     E A + ++ ++
Sbjct: 381 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLL 440

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G   N   + ++++  C+ + F  A ++  +M  K   PD+I    +   L    +++
Sbjct: 441 VKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDEND 500

Query: 526 LAMKLFRKMEIRGL 539
            A K+ R+M  RGL
Sbjct: 501 KAEKILREMIARGL 514



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 133/295 (45%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R  P  +  N ++ +          + +FK  ES G  P + T N L++
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C+   ++ A      + K G  PN IT NTLI G C +G++ +A     ++ A     
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N V+Y TLING  + G ++  A L  ++  + +K D++ YN +I  LCK      A  L 
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    + PN  TY+AL+ G C+  + + AF L   M      P+   F  L+    + 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A  VL  M++ C+ PD +  + L  G     K + A  +F  M   G+ P
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTP 341



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 184/417 (44%), Gaps = 51/417 (12%)

Query: 140 LETHSI---------VLHILTKNRKFKS-----SESILRGILDSDSFDLPSKL-FDSILY 184
           LE HS+         ++H L KN+         SE I++GI        P+ + +++++Y
Sbjct: 194 LEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGIS-------PNVVTYNALVY 246

Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
            + +       F LL     +  K +N     C      F  +I++  K     + + ++
Sbjct: 247 GFCIMGHLKEAFSLL-----NEMKLKNINPDVCT-----FNTLIDALGK--EGKMKAAKI 294

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
            +A+     M +  I P+V T N ++  +  L  ++ A  VF +M   G  P+V TY T+
Sbjct: 295 VLAV-----MMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTM 349

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G C + ++  AM     M+   + P+++T+ +LI G CK   L  A  +  +MK   +
Sbjct: 350 IDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGI 409

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+V +Y  L++   + G  E     ++ +L  G  +++ TYN +I GLCK     +A  
Sbjct: 410 QPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMD 469

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L   ++    +P+A T+  +I     +  +++A ++ + MI  G +  + +         
Sbjct: 470 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKV--------- 520

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                  A  VL  M + C+ PD +    L  G     + + A  +F  M   G+ P
Sbjct: 521 ---RLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 170/351 (48%), Gaps = 27/351 (7%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR----RNRISPNVYTLNMVMHAF 273
           +MRD G  P + + N  +S+L  + RV  A   + +M+    R    P+  T ++++  F
Sbjct: 237 RMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGF 296

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C+ G+++ A  +   M   GF+  V +YN  +SG    G++  A +    M   G+QPN 
Sbjct: 297 CEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNS 356

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T+N ++ G CK+GK  +  ++   +K+  ++P+VVTY +L++ Y   GN+     + +E
Sbjct: 357 YTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDE 416

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M + G   +  TYN L+  L K G+  +A  L++ + +     + ++ + +I G C    
Sbjct: 417 MAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNK 476

Query: 454 SERAFQLYKSMIRSG-----------------------CRPNKHIFEMLMSTFCQNEDFD 490
            + A  +   M   G                       C P++  +  L+S  C+   FD
Sbjct: 477 LDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFD 536

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            A + LLEM+ K ++PDS++      G    GK  LA+K+ R ME +G  P
Sbjct: 537 EAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKP 587



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 164/341 (48%), Gaps = 37/341 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF----- 286
           N+ L + L   R D+    YK++  +  +P+V+T N+++ A C  G +E A  VF     
Sbjct: 119 NRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPE 178

Query: 287 -----------------KNMESMGFIPSVTTY-----NTLISGHCNKGLLSLAMKFKNLM 324
                            ++M+++G + S+ T      NT+++G C +G +  A +    M
Sbjct: 179 RNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERM 238

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----SPNVVTYNTLINGYGQ 380
              G+ PNV+TFN  I   CK G++ +A RIF++M+         P+ VT++ +++G+ +
Sbjct: 239 RDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCE 298

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +    L + M   G    + +YN  + GL + G   +A  L++++    + PN+ T
Sbjct: 299 AGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYT 358

Query: 441 YSALITGQCVRKNSERAFQLYK--SMIRSGC-RPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           Y+ ++ G C      +AF + K    ++SG   P+   +  L+  +C   +   A  +L 
Sbjct: 359 YNIIVDGLC---KEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILD 415

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           EM +K  AP+S   + L   L   G+   A +L  +M  +G
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKG 456



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 164/373 (43%), Gaps = 27/373 (7%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + FD++   +        A      MR  GFL  +ES N++LS L+ +  V  A    +E
Sbjct: 287 VTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLRE 346

Query: 254 MRRNRISPNVYTLNMVMHAFCKLG--IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           M    + PN YT N+++   CK G     R VE F  ++S    P V TY +L+  +C++
Sbjct: 347 MAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDF--VKSGVMTPDVVTYTSLLHAYCSE 404

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  + A +  + M + G  PN  T+N L+    K G++ EA R+   M     S +  + 
Sbjct: 405 GNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASC 464

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKV-----------------------DILTYNA 408
           N +I+G  +    +M   + + M   G                          D +TY+ 
Sbjct: 465 NIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYST 524

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           L+  LCKEG+  +A   + ++    + P++  Y   I G C    +  A ++ + M + G
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C+P+   + +L+  F +  + D   +++ EM  K + P+ +  + L       G    AM
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644

Query: 529 KLFRKMEIRGLLP 541
            L  +M    ++P
Sbjct: 645 PLLDEMLQNEIVP 657



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 125/274 (45%), Gaps = 23/274 (8%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM +   +PN +T N+++ +  K G I  A  + + M   G+     + N +I G C   
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNN 475

Query: 313 LLSLAMKFKNLMEKNG-----------------------IQPNVITFNTLIFGFCKKGKL 349
            L +AM   + M   G                         P+ IT++TL+   CK+G+ 
Sbjct: 476 KLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRF 535

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA +   EM   ++SP+ V Y+T I+GY + G + +   +  +M + G K    TYN L
Sbjct: 536 DEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLL 595

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G  ++  + +   L+ ++    + PN  TY++LI   C R    +A  L   M+++  
Sbjct: 596 IWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEI 655

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
            PN   FE+L+  FC+  DF  A  V    L  C
Sbjct: 656 VPNITSFELLIKAFCKTSDFSAAQRVFDASLSTC 689



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 4/281 (1%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP   + +  +S+L    R D A     EM    ISP+    +  +H +CK G    AV+
Sbjct: 516 LPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVK 575

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V ++ME  G  PS  TYN LI G   K      +K  + M+  GI PNV+T+N+LI  FC
Sbjct: 576 VLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFC 635

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           ++G +++A  +  EM    + PN+ ++  LI  + +  +      +++  L    + ++L
Sbjct: 636 ERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVL 695

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            Y+ +   L   G+  +A  +++ + +  +  +   Y  +I G C     +   +L K +
Sbjct: 696 -YSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLL 754

Query: 465 IRSGCRPNKHIFEMLMSTFCQ---NEDFDRAAEVLLEMLEK 502
           +  G   +   F  ++    +    +  D  ++ ++EM E+
Sbjct: 755 MVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAER 795



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/346 (21%), Positives = 136/346 (39%), Gaps = 6/346 (1%)

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----- 186
           + K  SL   + +I++  L +N K   +  I+ G+ +  S  L    +  +         
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C    + +  L        +F  A     +M      P     + F+       +  +
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL 572

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+   ++M +    P+  T N+++  F +    +  +++   M+  G  P+V TYN+LI 
Sbjct: 573 AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIK 632

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +G+++ AM   + M +N I PN+ +F  LI  FCK      A R+F    +T    
Sbjct: 633 SFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLST-CGQ 691

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
             V Y+ +       G      ++ E +L   I +    Y  +I GLCK  +      L+
Sbjct: 692 KEVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLL 751

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           K L       + + +  +I     R   +    L + M+    R N
Sbjct: 752 KLLMVKGYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERDN 797



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 112/251 (44%), Gaps = 16/251 (6%)

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN L+     +    L       +  +G  P+V T N L+   C  G++  A R+F  M
Sbjct: 117 VYNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAM 176

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
                  N  ++  L  GY + G S     + + M      ++++  N ++ G C+EG+ 
Sbjct: 177 PER----NEFSFGILARGYCRAGRSMDALGVLDSM----PTMNLVVCNTVVAGFCREGQV 228

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI----RSGCRPNKHI 475
            +A  LV+ +    L PN  T++A I+  C       A++++  M     R   RP++  
Sbjct: 229 DEAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVT 288

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS--ELYSGLHHCGKDELAMKLFRK 533
           F++++S FC+    D  A VL++++ +C      + S     SGL   G    A +L R+
Sbjct: 289 FDVMLSGFCEAGMVDE-ARVLVDIM-RCGGFLRRVESYNRWLSGLVRNGMVGEAQELLRE 346

Query: 534 MEIRGLLPKGF 544
           M   G+ P  +
Sbjct: 347 MAHEGVQPNSY 357


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 200/411 (48%), Gaps = 17/411 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFDSILYSYRM 188
           T++I + +L ++ K   +  I++ + D              D+     KL D++    +M
Sbjct: 266 TYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKM 325

Query: 189 CDSS----PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
             SS     + +  L   ++           + +M   G+ P + +    +++L  + R+
Sbjct: 326 KSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRI 385

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           + A      MR+  + PN++T N ++    +   ++ A+++F NMES+G  P+  TY  L
Sbjct: 386 NEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I  H   G    A++    M+  GI PN++  N  ++   + G+L EA  +F+E+K++ +
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGL 505

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +P+ VTYN ++  Y +VG  +    L  EM +   + D++  N+LI  L K G+ ++A  
Sbjct: 506 APDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQ 565

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           +   +++ +L P   TY+ L+ G       ++A QL++SM   GC PN   F  L+   C
Sbjct: 566 MFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLC 625

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +N++ D A ++  +M      PD +  + +  G     + + A+ LF +M+
Sbjct: 626 KNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 157/318 (49%), Gaps = 2/318 (0%)

Query: 162  ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
            ++ G L+  + ++   LF+ +      C      ++ L   +    K     D + +M  
Sbjct: 796  LIDGFLEVHNVEVAWNLFEEM--KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLT 853

Query: 222  YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             G  P   + N  +S+L+ S R+D A+  Y  +     SP   T   ++    K G ++ 
Sbjct: 854  RGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDD 913

Query: 282  AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            A E+F  M   G  P+   YN L++G+   G +  A +F   M K GI+P++ ++  L+ 
Sbjct: 914  AHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVD 973

Query: 342  GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
              C  G++ +A   F ++K   + P++V YN +ING G+   +E   SL+ EM   GI  
Sbjct: 974  ILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVP 1033

Query: 402  DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
            D+ TYN+LIL L   G  ++A  + ++L    L PN  TY+ALI G  +  NSE A+ +Y
Sbjct: 1034 DLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIY 1093

Query: 462  KSMIRSGCRPNKHIFEML 479
            K M+  GC PN   F  L
Sbjct: 1094 KKMMVGGCDPNTGTFAQL 1111



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 182/392 (46%), Gaps = 15/392 (3%)

Query: 182 ILYSYRMCDSSPLVFDLL---------------FKTYAHRKKFRNATDTFCQMRDYGFLP 226
           IL  +R  +    VFDL+               FK+   R   R A     +MR+ GF+ 
Sbjct: 133 ILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVL 192

Query: 227 IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
              S N  +  LL S     AL  Y+ M    + P++ T + +M A  K   I+  + + 
Sbjct: 193 NAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLL 252

Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
           + MESMG  P++ TY   I      G +  A +    M+ +G  P+V+T+  LI   C  
Sbjct: 253 EEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTA 312

Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
            KL +A  +F++MK+++  P+ VTY TL++ +   G+ +    ++ EM  +G   D++T+
Sbjct: 313 RKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTF 372

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
             L+  LCK G+  +A  L+  + K  ++PN  TY+ LI+G       + A  L+ +M  
Sbjct: 373 TILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES 432

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            G  P  + + +L+    ++    +A E   +M  + +AP+ +  +     L   G+   
Sbjct: 433 LGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGE 492

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           A  +F +++  GL P        + C  + G+
Sbjct: 493 AKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQ 524



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 175/383 (45%), Gaps = 3/383 (0%)

Query: 160  ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
            E ++ GIL +++    + LF   L    +C    ++  ++ K     KK   A + F + 
Sbjct: 723  EDVMGGIL-TEAGTEKAILFGERLVCRAICKDDSVLIPII-KVLCKHKKTSVARNVFVKF 780

Query: 220  -RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
             ++ G  P ++  N  +   L+   V++A   ++EM+    +P+ +T N ++ A  K G 
Sbjct: 781  TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 279  IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            I    +++  M + G  P+  TYN +IS       L  AM     +      P   TF  
Sbjct: 841  INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 339  LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            LI G  K G+L +A+ +F  M      PN   YN L+NGYG++G+ +     ++ M++ G
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 399  IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            I+ D+ +Y  L+  LC  G+   A +  + L +  L P+   Y+ +I G    + +E A 
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 459  QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             L+  M   G  P+ + +  L+         + A ++  E+    + P+    + L  G 
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080

Query: 519  HHCGKDELAMKLFRKMEIRGLLP 541
               G  ELA  +++KM + G  P
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDP 1103



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/444 (23%), Positives = 197/444 (44%), Gaps = 43/444 (9%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS   L+T S ++    K R  K+   +L         ++ S      +Y+Y +C    
Sbjct: 226 KPS---LKTFSALMVASGKRRNIKTVMGLLE--------EMESMGLRPNIYTYTIC---- 270

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
                  +      K   A     +M D G  P + +    + +L  + ++D A+  + +
Sbjct: 271 ------IRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTK 324

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ +   P+  T   ++  F   G +++  +++  ME+ G+ P V T+  L++  C  G 
Sbjct: 325 MKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGR 384

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A    + M K G+ PN+ T+NTLI G  +  +L +A  +FS M++  V P   TY  
Sbjct: 385 INEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYIL 444

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ +G+ G+       +E+M   GI  +I+  NA +  L + G+  +A  +  +L  + 
Sbjct: 445 LIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSG 504

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L P++ TY+ ++         + A +L   M +  C P+  +   L+ T  +    + A 
Sbjct: 505 LAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAW 564

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP------------ 541
           ++   M E  +AP  +  + L +GL   G+ + A++LF  M   G  P            
Sbjct: 565 QMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCL 624

Query: 542 ----------KGFDKLRTINCAPE 555
                     K F K+ T+NC P+
Sbjct: 625 CKNDEVDLALKMFYKMTTMNCRPD 648



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 191/419 (45%), Gaps = 27/419 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+L ++  D    LF ++       + +   + LL   +        A +TF +M+
Sbjct: 409 TLISGLLRANRLDDALDLFSNM--ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMK 466

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I +CN  L SL +  R+  A   + E++ + ++P+  T NM+M  + K+G ++
Sbjct: 467 ARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVD 526

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+++   M  +   P V   N+LI      G +  A +    ME+  + P V+T+N L+
Sbjct: 527 EAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILL 586

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K+G++ +A ++F  M     SPN +T+NTL++   +    ++   ++ +M     +
Sbjct: 587 AGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCR 646

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+LT+N +I G  K+ + K A +L   + K  L P+  T   L+ G       E AF++
Sbjct: 647 PDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRI 705

Query: 461 YKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            +    + G   ++  +E +M         ++A      ++ + +  D  +L  +   L 
Sbjct: 706 TEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLC 765

Query: 520 HCGKDELAMKLFRK----------MEIRGLLPKG-------------FDKLRTINCAPE 555
              K  +A  +F K          +++  LL  G             F+++++  CAP+
Sbjct: 766 KHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPD 824



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 107/215 (49%), Gaps = 2/215 (0%)

Query: 162  ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
            ++ G+L S   D   ++FD +++    C  +  ++++L   Y        A + F +M  
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVH--YGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVK 958

Query: 222  YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
             G  P ++S    +  L  + RVD AL +++++++  + P++   N++++   +    E 
Sbjct: 959  EGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEE 1018

Query: 282  AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
            A+ +F  M++ G +P + TYN+LI      G++  A K    ++  G++PNV T+N LI 
Sbjct: 1019 ALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIR 1078

Query: 342  GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
            G+   G    A  I+ +M      PN  T+  L N
Sbjct: 1079 GYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113


>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 598

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 121/466 (25%), Positives = 220/466 (47%), Gaps = 26/466 (5%)

Query: 81  FVNIAYSHLIHSDWKK--LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
           FV IA +  + S+     +   S HLTP  V  V+ ++     L  +F  + +     S 
Sbjct: 11  FVKIACTVFVRSNSLDPFVGYFSKHLTPSLVYEVVNRLHIPN-LGFKFVEFCRHKLHMSH 69

Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
           +  T+S++L  L ++     +  ++   +  D     ++L   +++SY +     +  +L
Sbjct: 70  SYLTYSLLLRSLCRS-NLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSREL 128

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L              D  C   + G   ++   N   + L+   +V  A+  ++E+ R R
Sbjct: 129 L-------------ADVQCN--NVGVNAVVY--NDLFNVLIRQNKVVDAVVLFRELIRLR 171

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
             P  YT+N++M   C+ G I+ A  +  ++ S G +P V TYNTLI G C    +  A 
Sbjct: 172 YKPVTYTVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRAR 231

Query: 319 KFKNLMEKNG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                +  NG   P+V+++ T+I G+CK  K+ E N +F EM  +  +PN  T+N LI G
Sbjct: 232 SLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGG 291

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +G++G+     +LYE+ML  G   D+ T+ +LI G  + G+  +A  +   ++  ++   
Sbjct: 292 FGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGAT 351

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             T+S L++G C      +A  + + +  S   P   I+  ++  +C++ + D A +++ 
Sbjct: 352 LYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVA 411

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           EM      PD +  + L  G  HC K  +  A+ +F KM   G  P
Sbjct: 412 EMEVNRCKPDKLTFTILIIG--HCMKGRMPEAIGIFHKMLAVGCAP 455



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/313 (24%), Positives = 151/313 (48%), Gaps = 3/313 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L SL  S     A   Y  MR +   P+   L  ++ ++  +G ++ + E+  +++   
Sbjct: 77  LLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQCNN 136

Query: 294 FIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
              +   YN L +    +  ++   + F+ L+     +P   T N L+ G C+ G++ EA
Sbjct: 137 VGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLR-YKPVTYTVNILMRGLCRAGEIDEA 195

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-IKVDILTYNALIL 411
            R+ +++++    P+V+TYNTLI+G  ++   +   SL +E+  NG    D+++Y  +I 
Sbjct: 196 FRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIIS 255

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK  K ++   L  ++ ++   PN  T++ALI G     +   A  LY+ M+  GC P
Sbjct: 256 GYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVP 315

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   F  L++ + +     +A ++  +M +K +       S L SGL +  +   A  + 
Sbjct: 316 DVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDIL 375

Query: 532 RKMEIRGLLPKGF 544
           R +    ++P+ F
Sbjct: 376 RLLNESDIVPQPF 388



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 108/237 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +   Y    K       F +M   G  P   + N  +        +  AL  Y++M 
Sbjct: 250 YTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKML 309

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+V T   +++ + +LG + +A++++  M       ++ T++ L+SG CN   L 
Sbjct: 310 VQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLH 369

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A     L+ ++ I P    +N +I G+CK G + EAN+I +EM+     P+ +T+  LI
Sbjct: 370 KARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILI 429

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            G+   G       ++ +ML  G   D +T N L   L K G   +AA + K L +N
Sbjct: 430 IGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLAQN 486



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 70/167 (41%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F  L   Y    +   A D + +M D      + + +  +S L ++ R+  A 
Sbjct: 313 CVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKAR 372

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + +  + I P  +  N V+  +CK G ++ A ++   ME     P   T+  LI GH
Sbjct: 373 DILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGH 432

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           C KG +  A+   + M   G  P+ IT N L     K G   EA R+
Sbjct: 433 CMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARV 479


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 2/322 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L + Y   +K   A      M   GF   + + N  L  L  +     A+   +EMRRN 
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+V++ N V+  FC+   +E+A+E+   M+  G   S+ T+  LI   C  G +  AM
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
            F   M+  G++ +++ + +LI GFC  G+L     +F E+     SP  +TYNTLI G+
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            ++G  +  + ++E M+  G++ ++ TY  LI GLC  GKTK+A  L+  + +    PNA
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TY+ +I   C       A ++ + M +   RP+   + +L+   C   D D A+++L  
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 499 MLEKCMAPDSIILSELYSGLHH 520
           ML+     D  ++S  Y+ L H
Sbjct: 413 MLKDSSYTDPDVIS--YNALIH 432



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 149/297 (50%), Gaps = 2/297 (0%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S +  L   +   +   A G    M +   + NVY  N+++   C+     +AV + + M
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                +P V +YNT+I G C    L  A++  N M+ +G   +++T+  LI  FCK GK+
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA     EMK   +  ++V Y +LI G+   G  + G +L++E+L  G     +TYN L
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I G CK G+ K+A+ + + + +  + PN  TY+ LI G C    ++ A QL   MI    
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
            PN   + ++++  C++     A E++  M ++   PD+I  + L  GL  C K +L
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL--CAKGDL 403



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 166/340 (48%), Gaps = 2/340 (0%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           ++L K      +   A     +MR    +P + S N  +    + + ++ AL    EM+ 
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           +  S ++ T  +++ AFCK G ++ A+   K M+ MG    +  Y +LI G C+ G L  
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                + + + G  P  IT+NTLI GFCK G+L EA+ IF  M    V PNV TY  LI+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G   VG ++    L   M+    + + +TYN +I  LCK+G    A  +V+ + K    P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIR--SGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +  TY+ L+ G C + + + A +L   M++  S   P+   +  L+   C+     +A +
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           +   ++EK  A D +  + L +     G    AM+L++++
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 178/383 (46%), Gaps = 4/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++RG  D    D    LFD +L   R      + ++ L + +    + + A++ F  M 
Sbjct: 252 SLIRGFCDCGELDRGKALFDEVLE--RGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + +    +  L    +   AL     M      PN  T N++++  CK G++ 
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVITFNT 338
            AVE+ + M+     P   TYN L+ G C KG L  A K   LM K+     P+VI++N 
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+ +LH+A  I+  +     + + VT N L+N   + G+      L++++  + 
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  +  TY A+I G CK G    A  L+  +  + L P+   Y+ L++  C   + ++A+
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAW 549

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L++ M R    P+   F +++    +  D   A  +L+ M    ++PD    S+L +  
Sbjct: 550 RLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G  + A+  F KM   G  P
Sbjct: 610 LKLGYLDEAISFFDKMVDSGFEP 632



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 127/261 (48%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + S N  +  L    R+  AL  Y  +     + +  T N+++++  K G + +A+E+
Sbjct: 422 PDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           +K +     + +  TY  +I G C  G+L++A      M  + +QP+V  +N L+   CK
Sbjct: 482 WKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCK 541

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +G L +A R+F EM+  N  P+VV++N +I+G  + G+ +   SL   M R G+  D+ T
Sbjct: 542 EGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFT 601

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI    K G   +A      +  +   P+A    +++     +  +++  +L K ++
Sbjct: 602 YSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLV 661

Query: 466 RSGCRPNKHIFEMLMSTFCQN 486
                 +K +   +M   C +
Sbjct: 662 DKDIVLDKELTCTVMDYMCNS 682



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 16/204 (7%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L+K  +  K  RN +DT+  M D GF                +  +++A G   +MR + 
Sbjct: 481 LWKQISDSKIVRN-SDTYTAMID-GFCK--------------TGMLNVAKGLLCKMRVSE 524

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + P+V+  N ++ + CK G +++A  +F+ M+     P V ++N +I G    G +  A 
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
                M + G+ P++ T++ LI  F K G L EA   F +M  +   P+    ++++   
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644

Query: 379 GQVGNSEMGASLYEEMLRNGIKVD 402
              G ++    L ++++   I +D
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLD 668


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 201/486 (41%), Gaps = 62/486 (12%)

Query: 93  DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
           D  +L    T +TP+++   LL++  D   S+E F W  T K      + + +++  L  
Sbjct: 83  DLPELRTSLTRITPYQLCK-LLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGA 141

Query: 153 NRKFKSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
             +FK+++++L      GI+  +S                       +F L+ K Y    
Sbjct: 142 AGEFKTTDALLMQMKQEGIVFRES-----------------------LFILIMKHYGRAG 178

Query: 208 KFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
               AT     MR  Y   P   S N  L  LL      +    + EM    ISP VYT 
Sbjct: 179 LPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTF 238

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +VM A C +  ++ A  + K+M   G +P+   Y TLI      G ++  +K    M  
Sbjct: 239 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLL 298

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS--------------------- 365
            G  P+V TFN  I G CK  ++HEA ++   M     +                     
Sbjct: 299 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 358

Query: 366 ----------PNVVTYNTLINGYGQVGN-SEMGASLYEEMLRNGIKVDILTYNALILGLC 414
                     PNVV +NTLINGY   G   E  A ++E ML  G   DI TYN LILGLC
Sbjct: 359 ARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 418

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K+G    A  L+ ++      PN  TY+ LI   C     E A  +   M   G   N  
Sbjct: 419 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 478

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+S  C++E    A  +  +M  K   PD    + L  GL    K E A+ L++ M
Sbjct: 479 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 538

Query: 535 EIRGLL 540
            + G++
Sbjct: 539 LLEGVI 544



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 188/433 (43%), Gaps = 69/433 (15%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + +V+  L    +   +         +M   G +P + + N  +  L    R+  A 
Sbjct: 266 CVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAA 325

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA-----------VEVF----------- 286
                M     +PN +T  ++MH  C++G ++ A           V +F           
Sbjct: 326 KLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRG 385

Query: 287 ----------KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
                     ++M S+G  P + TYNTLI G C KG L  A +  N M+  G +PNVIT+
Sbjct: 386 RLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITY 445

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
             LI  FCK+G+L EA  +  EM    ++ N V YN LI+   +    +   +++ +M  
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS-------------- 442
            G K DI T+N+LI GLCK  K ++A  L +D+    ++ N  TY+              
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565

Query: 443 ---------------------ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
                                 LI   C   N E+   L++ M+  G  PN     +L++
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+  +   A E L +M+ + + PD +  + L +GL   G+ + A+ LF K+++ G+ P
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685

Query: 542 KG--FDKLRTINC 552
               ++ L + +C
Sbjct: 686 DAITYNTLISWHC 698



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + + + +L   +    +   A +   +M   G        N  +S+L   E+V  AL
Sbjct: 438 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 497

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M      P+++T N ++   CK+   E A+ ++++M   G I +  TYNTLI   
Sbjct: 498 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 557

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G +  A+K  N M   G   + IT+N LI   C+ G + +   +F +M +  ++PN 
Sbjct: 558 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 617

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++ N LING  + GN +       +M+  G+  DI+TYN+LI GLCK G+ ++A  L   
Sbjct: 618 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 677

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+A TY+ LI+  C     + A  L    + SG  PN+  + +L+S F +  D
Sbjct: 678 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 737



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 154/337 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      ++ L      +    +A +   +M+  G  P + +    +       R++ A 
Sbjct: 403 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 462

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    ++ N    N ++ A CK   ++ A+ +F +M S G  P + T+N+LI G 
Sbjct: 463 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 522

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C       A+     M   G+  N IT+NTLI  F ++G + EA ++ ++M       + 
Sbjct: 523 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 582

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN LI    + GN E G +L+E+M+  G+  + ++ N LI GLC+ G  + A   ++D
Sbjct: 583 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 642

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L P+  TY++LI G C    ++ A  L+  +   G  P+   +  L+S  C+   
Sbjct: 643 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 702

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           FD A  +L   ++    P+ +    L S     G  E
Sbjct: 703 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 166/360 (46%), Gaps = 35/360 (9%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C++ D G +P + + N  +  L  +ER D A   +KEM    + PN  T  +++HA CK 
Sbjct: 350 CKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR 409

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA------------------- 317
           G+IE A+ +F  M   G   +V  YN+LI+G+C +G L  A                   
Sbjct: 410 GMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASY 469

Query: 318 ----------------MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
                           M+    M + GI  N  TF  LI GFCK  K+ EA R+F +M  
Sbjct: 470 SPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMID 529

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           +NV PN VT+N +I GY  VGN      LY++M+  G+K D  TY +LI GLC      K
Sbjct: 530 SNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSK 589

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A   V DL+ +  V N  + +AL+ G          + L+  M   G + +   F +++ 
Sbjct: 590 ANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVY 649

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +  D +++  +  EM E+ + PD I  + +   L        A+  + +M + G  P
Sbjct: 650 AALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSP 709



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 178/387 (45%), Gaps = 2/387 (0%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           ++  IL  ++    F L   LFD +L S    D    V+    + Y   +    A     
Sbjct: 188 TASQILFSLVKIRQFALARDLFDKMLQSGVHLDE--YVYTAGIRAYCESRNLDGARGLVV 245

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G        N  +  L  + RV  A+     M    ++ +  T   +++ FC++ 
Sbjct: 246 RMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRME 305

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            +E A+ +  +M  +GF+PS    + +I     K L+  A      +   G+ PNV  +N
Sbjct: 306 ELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYN 365

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            LI   CK  +  +A+R+F EM    + PN VTY  LI+   + G  E    L+++M   
Sbjct: 366 ALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDK 425

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           GIKV +  YN+LI G CK+G   +A  L+  + K  L P A++YS LI G C   +    
Sbjct: 426 GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSC 485

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L++ M   G   N + F  L++ FC+++  D AA +  +M++  + P+ +  + +  G
Sbjct: 486 MELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEG 545

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGF 544
               G    A +L+ +M   GL P  +
Sbjct: 546 YCLVGNIRKAFQLYDQMVEMGLKPDNY 572



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 164/349 (46%), Gaps = 13/349 (3%)

Query: 204 AHRKKFRNATDTFCQMRDY-------------GFLPIIESCNKFLSSLLDSERVDIALGF 250
           A    +R     FC+M +              GF+P   +C+  +  L   E V+ A   
Sbjct: 289 ADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSL 348

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             ++    + PNV+  N ++   CK    + A  +FK M   G  P+  TY  LI   C 
Sbjct: 349 ACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCK 408

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G++  A+   + M   GI+  V  +N+LI G+CK+G L  A  + S M    ++P   +
Sbjct: 409 RGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAAS 468

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+ LI G  + G+      L+ EM   GI  +  T+ ALI G CK+ K  +AA L   + 
Sbjct: 469 YSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMI 528

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
            ++++PN  T++ +I G C+  N  +AFQLY  M+  G +P+ + +  L+S  C      
Sbjct: 529 DSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVS 588

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +A E + ++       ++  L+ L  G    G+      L+ +M +RG+
Sbjct: 589 KANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 637



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 172/393 (43%), Gaps = 38/393 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D  ++LFD ++ S  +   + + F+++ + Y      R A   + QM 
Sbjct: 506 ALINGFCKDKKMDEAARLFDKMIDSNVI--PNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563

Query: 221 DYGFLPI----------------IESCNKFLSSLLDSERV-------DIALGFYKEMRRN 257
           + G  P                 +   N+F++ L +S  V        +  GF++E R  
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 623

Query: 258 R------------ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
                        +  ++ +  ++++A  K    E++  +F+ M+  G  P    Y  +I
Sbjct: 624 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 683

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
                +  +  A+   + M  +G  PN +T   LI   CK G L  A  +  EM A NV 
Sbjct: 684 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 743

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  TYN  ++ +   G+ E    L+  ML+ G    I+++N LI GLCK GK ++A  L
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDL 802

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  + ++   P+  +YS +I   C   +  +AF+L+  M+  G +P+   + + +     
Sbjct: 803 MSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNV 862

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + + D+A  +   M+   + P+      L SG+
Sbjct: 863 HGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 3/309 (0%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++     +++D A   + +M  + + PN  T N+++  +C +G I +A +++  M  MG
Sbjct: 507 LINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMG 566

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P   TY +LISG C    +S A +F   +E +    N  +   L++GF ++G+  E  
Sbjct: 567 LKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETY 626

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            ++ EM    V  ++V++  ++    +  + E    L+ EM   G+K D + Y  +I  L
Sbjct: 627 HLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDAL 686

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
            KE    +A      +  +   PN  T++ LI   C       A  L K M+     PNK
Sbjct: 687 SKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNK 746

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII-LSELYSGLHHCGKDELAMKLFR 532
             +   +  F    D ++A ++   ML+  +A  SI+  + L  GL   GK + A+ L  
Sbjct: 747 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHLA--SIVSFNILIKGLCKAGKIQEAIDLMS 804

Query: 533 KMEIRGLLP 541
           K+   G  P
Sbjct: 805 KITESGFSP 813



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/366 (21%), Positives = 165/366 (45%), Gaps = 18/366 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L K           RG+++ D+  L  K+ D      +    +   ++ L  
Sbjct: 398 TYAILIHALCK-----------RGMIE-DALCLFDKMRD------KGIKVTVYPYNSLIN 439

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y  +     A      M   G  P   S +  ++ L  +  +   +  ++EM    I+ 
Sbjct: 440 GYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAW 499

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT   +++ FCK   ++ A  +F  M     IP+  T+N +I G+C  G +  A +  
Sbjct: 500 NNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLY 559

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M + G++P+  T+ +LI G C    + +AN   ++++ +    N  +   L+ G+ + 
Sbjct: 560 DQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFRE 619

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       L++EM   G+K+D++++  ++    K+   +K+  L +++ +  + P+   Y
Sbjct: 620 GRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFY 679

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + +I      +N  +A   +  M+  G  PN     +L++  C++     A  +  EML 
Sbjct: 680 TCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLA 739

Query: 502 KCMAPD 507
             + P+
Sbjct: 740 GNVLPN 745


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 158/318 (49%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S   ++ +      + ++  A     +M + G  P   + N  L      +    A   +
Sbjct: 35  SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 94

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            EM R  + P++ + + +M  F +   +++A+  F++M+  G +P    Y  L+ G+C  
Sbjct: 95  GEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 154

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A+K ++ M + G   +VI +NT++ G CK+  L +A+++F EM      P+  T+
Sbjct: 155 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 214

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            TLI+G+ Q GN     SL+  M +  IK DI+ YN LI G CK G+ +KA+ L   +  
Sbjct: 215 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 274

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             + PN  TY  LI   C   +   AF+L+  MI  G +P       ++  +C++ D  +
Sbjct: 275 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 334

Query: 492 AAEVLLEMLEKCMAPDSI 509
           A E L  M+ K +APD I
Sbjct: 335 ADEFLGRMIAKGVAPDHI 352



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 147/288 (51%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+++T N +++  CK G   RA  +   M ++G  P  TTYNTL+   C +  
Sbjct: 27  MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 86

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S A +    M + G+ P++++F++L+  F +   L +A   F +MK   + P+ V Y  
Sbjct: 87  FSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 146

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L++GY + GN      + +EML  G  +D++ YN ++ GLCKE     A  L  ++ +  
Sbjct: 147 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 206

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            +P+  T++ LI G C   N  +A  L+ +M +   +P+   +  L+  FC+  + ++A+
Sbjct: 207 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 266

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E+   M+ + + P+ I    L +     G    A +L+  M  +G+ P
Sbjct: 267 ELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKP 314



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 122/244 (50%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TYNTLI  +C +GLL  A +  N M   G++P++ T+N +I G CKKG+   A  I  
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM    +SP+  TYNTL+    +  N      ++ EMLR G+  D++++++L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
              +A    +D+ K  LVP+   Y+ L+ G C   N   A ++   M+  GC  +   + 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            +++  C+ +    A ++  EM+E+   PD    + L  G    G    A+ LF  M  R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 538 GLLP 541
            + P
Sbjct: 241 NIKP 244



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 96/188 (51%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C    + ++ +       K   +A   F +M + G LP   +    +        +  AL
Sbjct: 172 CVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKAL 231

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +  M +  I P++   N ++  FCK+G +E+A E++  M S    P+  TY  LI+ +
Sbjct: 232 SLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAY 291

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C+ G +S A +  ++M + GI+P ++T NT+I G+C+ G   +A+     M A  V+P+ 
Sbjct: 292 CSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDH 351

Query: 369 VTYNTLIN 376
           ++YNTLIN
Sbjct: 352 ISYNTLIN 359



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 4/230 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +++ +L   Y        A     +M + G +  + + N  L+ L   + +  A   + E
Sbjct: 142 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 201

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      P+ YT   ++H  C+ G + +A+ +F  M      P +  YNTLI G C  G 
Sbjct: 202 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 261

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M    I PN IT+  LI  +C  G + EA R++  M    + P +VT NT
Sbjct: 262 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 321

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +I GY + G+S         M+  G+  D ++YN LI     +GK +  A
Sbjct: 322 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI----NDGKRRSVA 367


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 197/438 (44%), Gaps = 20/438 (4%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L+ALS    P  V  VL ++ KD   ++E+F W +         E+++ +L ++ + R F
Sbjct: 56  LSALSFKPQPEFVIGVLRRL-KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
            + + IL G +    F  PS   ++ +     C                  K R   D  
Sbjct: 115 DALDQIL-GEMSVAGFG-PS--VNTCIEMVLGC--------------VKANKLREGYDVV 156

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             MR + F P   +    + +       D+ L  +++M+     P V+    ++  F K 
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A+ +   M+S      +  YN  I      G + +A KF + +E NG++P+ +T+
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            ++I   CK  +L EA  +F  ++     P    YNT+I GYG  G  +   SL E    
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G    ++ YN ++  L K GK  +A  + +++ K++  PN STY+ LI   C     + 
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDT 395

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           AF+L  SM ++G  PN     +++   C+++  D A  +  EM  K   PD I    L  
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455

Query: 517 GLHHCGKDELAMKLFRKM 534
           GL   G+ + A K++ KM
Sbjct: 456 GLGKVGRVDDAYKVYEKM 473



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 180/379 (47%), Gaps = 2/379 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      D   K+++ +L S   C ++ +V+  L K + +  +  +    +  M 
Sbjct: 452 SLIDGLGKVGRVDDAYKVYEKMLDSD--CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           +    P ++  N ++  +  +   +     ++E++  R  P+  + ++++H   K G   
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              E+F +M+  G +     YN +I G C  G ++ A +    M+  G +P V+T+ ++I
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K  +L EA  +F E K+  +  NVV Y++LI+G+G+VG  +    + EE+++ G+ 
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ T+N+L+  L K  +  +A    + + +    PN  TY  LI G C  +   +AF  
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ M + G +P+   +  ++S   +  +   A  +          PDS   + +  GL +
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809

Query: 521 CGKDELAMKLFRKMEIRGL 539
             +   A  LF +   RGL
Sbjct: 810 GNRAMDAFSLFEETRRRGL 828



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 174/373 (46%), Gaps = 2/373 (0%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           S   D    +F+ +   Y++C    + F  L        +  +A   + +M D       
Sbjct: 425 SQKLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
                 + +  +  R +     YK+M     SP++  LN  M    K G  E+   +F+ 
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEE 542

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           +++  F+P   +Y+ LI G    G  +   +    M++ G   +   +N +I GFCK GK
Sbjct: 543 IKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGK 602

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +++A ++  EMK     P VVTY ++I+G  ++   +    L+EE     I+++++ Y++
Sbjct: 603 VNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSS 662

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           LI G  K G+  +A  ++++L +  L PN  T+++L+      +    A   ++SM    
Sbjct: 663 LIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELK 722

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN+  + +L++  C+   F++A     EM ++ M P +I  + + SGL   G    A 
Sbjct: 723 CTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAG 782

Query: 529 KLFRKMEIRGLLP 541
            LF + +  G +P
Sbjct: 783 ALFDRFKANGGVP 795



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/347 (25%), Positives = 167/347 (48%), Gaps = 1/347 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           +F  L + +A   +  +A     +M+       I   N  + S     +VD+A  F+ E+
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEI 264

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
             N + P+  T   ++   CK   ++ AVE+F+++E    +P    YNT+I G+ + G  
Sbjct: 265 EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKF 324

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A          G  P+VI +N ++    K GK+ EA ++F EMK  + +PN+ TYN L
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNIL 383

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   + G  +    L + M + G+  ++ T N ++  LCK  K  +A  + +++D    
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            P+  T+ +LI G       + A+++Y+ M+ S CR N  ++  L+  F  +   +   +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  +M+ +  +PD  +L+     +   G+ E    +F +++ R  +P
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 172/368 (46%), Gaps = 10/368 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            ++ +   Y    KF  A     + R  G +P + + N  L+ L    +VD AL  ++EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +++  +PN+ T N+++   C+ G ++ A E+  +M+  G  P+V T N ++   C    L
Sbjct: 370 KKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A      M+     P+ ITF +LI G  K G++ +A +++ +M  ++   N + Y +L
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I  +   G  E G  +Y++M+      D+   N  +  + K G+ +K   + +++     
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP+A +YS LI G      +   ++L+ SM   GC  +   + +++  FC+    ++A +
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME---------IRGLLPKGFD 545
           +L EM  K   P  +    +  GL    + + A  LF + +         I   L  GF 
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668

Query: 546 KLRTINCA 553
           K+  I+ A
Sbjct: 669 KVGRIDEA 676



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 20/352 (5%)

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
           F+ Y  R +  +  +++  +     L ++  C  F       + +D  LG   EM     
Sbjct: 85  FRWYERRTELPHCPESYNSL-----LLVMARCRNF-------DALDQILG---EMSVAGF 129

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+V T   ++    K   +    +V + M    F P+ + Y TLI          + + 
Sbjct: 130 GPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT 189

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M++ G +P V  F TLI GF K+G++  A  +  EMK++++  ++V YN  I+ +G
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           +VG  +M    + E+  NG+K D +TY ++I  LCK  +  +A  + + L+KN  VP   
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY 309

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
            Y+ +I G       + A+ L +     G  P+   +  +++   +    D A +V  EM
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            +K  AP+    + L   L   GK + A +L   M+  GL P     +RT+N
Sbjct: 370 -KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP----NVRTVN 416



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 3/292 (1%)

Query: 206 RKKFRNAT-DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           +  F N T + F  M++ G +    + N  +       +V+ A    +EM+     P V 
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNL 323
           T   V+    K+  ++ A  +F+  +S     +V  Y++LI G    G +  A +  + L
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M+K G+ PN+ T+N+L+    K  +++EA   F  MK    +PN VTY  LING  +V  
Sbjct: 684 MQK-GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRK 742

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                  ++EM + G+K   ++Y  +I GL K G   +A  L      N  VP+++ Y+A
Sbjct: 743 FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNA 802

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           +I G      +  AF L++   R G   +     +L+ T  +N+  ++AA V
Sbjct: 803 MIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIV 854



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/376 (23%), Positives = 165/376 (43%), Gaps = 13/376 (3%)

Query: 190 DSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           D++P    +++L        K   A +    M+  G  P + + N  +  L  S+++D A
Sbjct: 372 DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEA 431

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
              ++EM     +P+  T   ++    K+G ++ A +V++ M       +   Y +LI  
Sbjct: 432 CAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKN 491

Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             N G      K +K+++ +N   P++   NT +    K G+  +   +F E+KA    P
Sbjct: 492 FFNHGRKEDGHKIYKDMINQN-CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP 550

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  +Y+ LI+G  + G +     L+  M   G  +D   YN +I G CK GK  KA  L+
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +++      P   TY ++I G       + A+ L++         N  I+  L+  F + 
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM-EIR-------- 537
              D A  +L E+++K + P+    + L   L    +   A+  F+ M E++        
Sbjct: 671 GRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTY 730

Query: 538 GLLPKGFDKLRTINCA 553
           G+L  G  K+R  N A
Sbjct: 731 GILINGLCKVRKFNKA 746



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 171/397 (43%), Gaps = 10/397 (2%)

Query: 150 LTKNRKFKSS---ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYA 204
           L KNR+   +    +++ G   +  FD       S+L   R   S P  + ++ +     
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAY----SLLERQRAKGSIPSVIAYNCILTCLR 354

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
              K   A   F +M+     P + + N  +  L  + ++D A      M++  + PNV 
Sbjct: 355 KMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVR 413

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T+N+++   CK   ++ A  +F+ M+     P   T+ +LI G    G +  A K    M
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
             +  + N I + +LI  F   G+  + ++I+ +M   N SP++   NT ++   + G  
Sbjct: 474 LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEP 533

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E G +++EE+       D  +Y+ LI GL K G   +   L   + +   V +   Y+ +
Sbjct: 534 EKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIV 593

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C      +A+QL + M   G  P    +  ++    + +  D A  +  E   K +
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + +I S L  G    G+ + A  +  ++  +GL P
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/287 (23%), Positives = 133/287 (46%), Gaps = 6/287 (2%)

Query: 152 KNRKF----KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
           K R+F    +S   ++ G++ +   +   +LF S+    + C      ++++   +    
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSM--KEQGCVLDTRAYNIVIDGFCKCG 601

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A     +M+  GF P + +    +  L   +R+D A   ++E +  RI  NV   +
Sbjct: 602 KVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYS 661

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++  F K+G I+ A  + + +   G  P++ T+N+L+        ++ A+     M++ 
Sbjct: 662 SLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL 721

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
              PN +T+  LI G CK  K ++A   + EM+   + P+ ++Y T+I+G  + GN    
Sbjct: 722 KCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEA 781

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
            +L++    NG   D   YNA+I GL    +   A  L ++  +  L
Sbjct: 782 GALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 116/276 (42%), Gaps = 5/276 (1%)

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSV-TTYNTL--ISGHCNKGLLSLAMKFKNLME 325
           V+    +L  + RA+E F+  E    +P    +YN+L  +   C         +    M 
Sbjct: 68  VIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRN--FDALDQILGEMS 125

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
             G  P+V T   ++ G  K  KL E   +   M+     P    Y TLI  +  V +S+
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
           M  +L+++M   G +  +  +  LI G  KEG+   A  L+ ++  +SL  +   Y+  I
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
                    + A++ +  +  +G +P++  +  ++   C+    D A E+   + +    
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV 305

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           P +   + +  G    GK + A  L  +   +G +P
Sbjct: 306 PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP 341


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 193/421 (45%), Gaps = 70/421 (16%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K   A D F  M     LP +   +K  S++   +  D+ LGF KEM  N I  N+YT+N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           ++++ FC+   +  A  V       GF P+  T++TLI+G C +G +S A+   + M + 
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEA-----------------------NR---------- 354
             +PNV+T NTLI G C KG++ EA                       NR          
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 355 --IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +F +M+  ++  +VV Y+ +I+   + GN +   SL+ EM   GIK D++ Y+++I G
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNAST-------------------------------- 440
           LC +G+    A +++++   +++PN  T                                
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPD 348

Query: 441 ---YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
              YS+LI G C       A Q+   M+  GC PN   + +L++++C+ +  D    +  
Sbjct: 349 TITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFC 408

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           E+  K +  D++  + L  G    GK  +A +LF++M  RG+ P        ++   +NG
Sbjct: 409 EISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 468

Query: 558 E 558
           E
Sbjct: 469 E 469



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 161/342 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L   +    +   A     +M +  + P + + N  ++ L    RV  AL     
Sbjct: 140 ITFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDR 199

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M +     N  T   V++  CK G    A+++F+ ME      SV  Y+ +I   C  G 
Sbjct: 200 MVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGN 259

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   N ME  GI+ +V+ ++++I G C  G+  +  ++  EM   N+ PNVVT++ 
Sbjct: 260 LDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       LY EM+  GI  D +TY++LI G CKE +  +A  ++  +    
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  TYS LI   C  K  +   +L+  +   G   +   +  L+  FCQ+   + A 
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + P  +    L  GL   G+ + A+++F KM+
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQ 481



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 170/354 (48%), Gaps = 4/354 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R   +S + + ++  +        +A   F +M   G    + + +  +  L +  R D 
Sbjct: 238 RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDD 297

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
                +EM    I PNV T + ++  F K G +  A E++  M + G  P   TY++LI 
Sbjct: 298 GAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLID 357

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C +  L  A +  +LM   G +PN++T++ LI  +CK  ++    R+F E+ +  +  
Sbjct: 358 GFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVA 417

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYNTL+ G+ Q G   +   L++EM+  G+   ++TY  L+ GLC  G+ +KA  + 
Sbjct: 418 DTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIF 477

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + K+ ++     Y+ +I G C     + A+ L+ S+   G +P+   + +++   C+ 
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
                A  +  +M E   AP     + L     H G   +  +++L  +M++RG
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRA--HLGGSGVISSVELIEEMKMRG 589



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 164/353 (46%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+++ + +  +            A D F +M +      +   +  + SL     +D AL
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM    I  +V   + ++   C  G  +   ++ + M     IP+V T++ LI   
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G L  A +  N M   GI P+ IT+++LI GFCK+ +L EAN++   M +    PN+
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTY+ LIN Y +    + G  L+ E+   G+  D +TYN L+ G C+ GK   A  L ++
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    + P+  TY  L+ G C     ++A ++++ M +S       I+ +++   C    
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            D A  +   +  K + PD +  + +  GL   G    A  LFRKM+  G  P
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAP 557



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 149/320 (46%), Gaps = 2/320 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           SI+ G+ +   +D  +K+   ++   R    + + F  L   +    K   A + + +M 
Sbjct: 284 SIIGGLCNDGRWDDGAKMLREMIG--RNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMV 341

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + +  +       R+  A      M      PN+ T +++++++CK   ++
Sbjct: 342 ARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVD 401

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             + +F  + S G +    TYNTL+ G C  G L++A +    M   G+ P+V+T+  L+
Sbjct: 402 NGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILL 461

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  G+L +A  IF +M+ + +   +  YN +I+G       +   SL+  +   G+K
Sbjct: 462 DGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVK 521

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+LTYN +I GLCK+G   +A  L + + ++   P+  TY+ LI           + +L
Sbjct: 522 PDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVEL 581

Query: 461 YKSMIRSGCRPNKHIFEMLM 480
            + M   G   +    +M++
Sbjct: 582 IEEMKMRGFAADASTIKMVV 601



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 131/263 (49%), Gaps = 7/263 (2%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +     +++ D  L   + C+ + + + +L  +Y   K+  N    FC++ 
Sbjct: 354 SLIDGFCKENRLGEANQMLD--LMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEIS 411

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +     S ++++A   ++EM    + P+V T  +++   C  G ++
Sbjct: 412 SKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQ 471

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+ M+    I  +  YN +I G CN   +  A      +   G++P+V+T+N +I
Sbjct: 472 KALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMI 531

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
            G CKKG L EA+ +F +MK    +P+  TYN LI  +  +G S + +S  L EEM   G
Sbjct: 532 GGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAH--LGGSGVISSVELIEEMKMRG 589

Query: 399 IKVDILTYNALILGLCKEGKTKK 421
              D  T   +++ L  +G+  K
Sbjct: 590 FAADASTIKMVVVML-SDGRLDK 611


>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
 gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
          Length = 613

 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 19/406 (4%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           S  +T   V  +L +   D+V +  FF WV T        +++ +++ IL K ++F    
Sbjct: 186 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 245

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            ++  +++                       S +    + +  A   ++  A D F +M 
Sbjct: 246 GLINQMVEVGGL------------------MSLMTMTKVMRRLAGASRWTEAIDAFHKMD 287

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            +G +   ++ N  L +L     V  A G ++E+R   I P+  + N ++H +CK  +++
Sbjct: 288 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR-GTIPPDENSFNTLVHGWCKARMLK 346

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A++  + M+  GF PSV TY +L+  +C +          + M K    PNV+T+  L+
Sbjct: 347 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 406

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               K G+  EA   F ++K   V+P+   YN+LI   G+ G  E   S+ EEM   GI 
Sbjct: 407 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 466

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ T+N LI   C   + + A  L+  +++ S  P+  TY+ L+   C R+  +    L
Sbjct: 467 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 526

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
              M R    P+   + +L+S  C+N    ++   L EM+ K  AP
Sbjct: 527 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 572



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +DL+       K+F        QM + G L  + +  K +  L  + R   A+  + +M 
Sbjct: 228 YDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 287

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  +  +   +N+++   CK   ++RA  VF+ +      P   ++NTL+ G C   +L 
Sbjct: 288 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLK 346

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M+++G  P+V+T+ +L+  +C +        +  EM+     PNVVTY  L+
Sbjct: 347 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 406

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G +      ++++  +G+  D   YN+LI  L + G+ + A  +V+++    + 
Sbjct: 407 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 466

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN +T++ LI+  C    +E A +L   M    C P+   +  L+   C+ +       +
Sbjct: 467 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 526

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +  M  K ++PD    + L S L   GK   +     +M  +G  PK
Sbjct: 527 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPK 573



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 86/190 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + + +L        + R A DTF ++++ G  P     N  +  L  + R++ 
Sbjct: 393 RRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLED 452

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    +EMR   I+PNV T N ++ A C     E A+++   ME     P + TY  L+ 
Sbjct: 453 AYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLK 512

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +  + + +     M +  I P+  T+  L+   C+ GK+ ++     EM +   +P
Sbjct: 513 LCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 572

Query: 367 NVVTYNTLIN 376
              T++ ++ 
Sbjct: 573 KQETFDLVME 582



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 3/268 (1%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+     +Y+ ++          L     N M + G   +++T   ++       +  EA
Sbjct: 220 GYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEA 279

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
              F +M    V  +    N L++   +  + +    +++E LR  I  D  ++N L+ G
Sbjct: 280 IDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHG 338

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK    K+A   ++++ ++   P+  TY++L+   C+ K+ +  + L   M +  C PN
Sbjct: 339 WCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPN 398

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +LM    +      A +   ++ E  +APD+   + L   L   G+ E A  +  
Sbjct: 399 VVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE 458

Query: 533 KMEIRGLLPK--GFDKLRTINCAPENGE 558
           +M   G+ P    F+ L +  C     E
Sbjct: 459 EMRTTGIAPNVTTFNTLISAACDHSQAE 486



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 19/200 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY----SYRMCDSSPLV-- 195
           T++I++H L K  + + +       L  D     +  ++S++Y    + R+ D+  +V  
Sbjct: 401 TYTILMHALGKAGRTREALDTFDK-LKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 459

Query: 196 ------------FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                       F+ L        +  NA     +M +    P I++    L      + 
Sbjct: 460 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 519

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V I L     M R  ISP+  T  +++   C+ G + ++    + M S GF P   T++ 
Sbjct: 520 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDL 579

Query: 304 LISGHCNKGLLSLAMKFKNL 323
           ++     + L S+  K + L
Sbjct: 580 VMEKLEKRNLQSVYKKIQVL 599


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 175/373 (46%), Gaps = 10/373 (2%)

Query: 178 LFDSILYSYRMCDSSPL------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           L D  LY +R   + P       V D L K     ++ R A + F +M   G +P + + 
Sbjct: 126 LLDEALYVFRRLWTLPALPACNAVLDGLVKA----RRSRCAWELFDEMLRRGMVPSVVTY 181

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  +++      V  A   + +M   +I PNV T   ++   C+ G I  A  +F  M+ 
Sbjct: 182 NTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKE 241

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TYN L+SGHC    ++ A      +  +G+ PN + F TLI GFCK  +  E
Sbjct: 242 AGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSE 301

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +F +M    V+P V  YN+L++G  + G+++   SLY+EM R G+  D  T + ++ 
Sbjct: 302 AKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVR 361

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC  G+ + AA  ++ + ++ +  NA+ Y+ALI   C   N E A      M   G  P
Sbjct: 362 GLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEP 421

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   +  L+    +      A  +  EM+ K + P+ +  + L  G    G  + A +  
Sbjct: 422 NVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFH 481

Query: 532 RKMEIRGLLPKGF 544
           ++M   G+ P   
Sbjct: 482 KEMIENGISPNAI 494



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 161/342 (47%), Gaps = 19/342 (5%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF  L   +   K+F  A D F  M  +G  P +   N  +     S     AL  Y+E
Sbjct: 284 VVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQE 343

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  + P+ +T ++V+   C  G I+ A    + +   G   +   YN LI  +C  G 
Sbjct: 344 MTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGN 403

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+     M + G++PNV+++++LI G  K GK+  A  I++EM A  + PNVVTY  
Sbjct: 404 LEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTA 463

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD----- 428
           LI+G+ + G  +     ++EM+ NGI  + +T + L+ GLC+E + + A   V +     
Sbjct: 464 LIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIK 523

Query: 429 ------------LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
                        ++  L+PN++ Y  LI G  +      A +L+  M +SG   +   +
Sbjct: 524 YSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAP--DSIILSELYS 516
            +L+   C       A  +  +M++  + P    II  E++S
Sbjct: 584 TLLIRGQCMLGYVLNAMMLYADMMKIGVKPMRYKIICPEIWS 625



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 164/333 (49%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP + +CN  L  L+ + R   A   + EM R  + P+V T N +++A    G + +A E
Sbjct: 140 LPALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQE 199

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           ++  M +    P+V TY ++I   C +G +  A +  + M++ G++PN  T+N L+ G C
Sbjct: 200 MWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHC 259

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           +   ++ A  ++ E+  + + PN V + TLI+G+ +         ++ +M R G+   + 
Sbjct: 260 QGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVP 319

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
            YN+L+ G  + G  ++A  L +++ +  L P+  T S ++ G C     + A +  + +
Sbjct: 320 VYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGV 379

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
              G   N   +  L+  +C+N + + A      M E  + P+ +  S L  G    GK 
Sbjct: 380 REDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKM 439

Query: 525 ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           ++AM ++ +M  +G+ P        I+   +NG
Sbjct: 440 QIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNG 472



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 163/375 (43%), Gaps = 17/375 (4%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  D + + +  +           +A   F  M++ G  P   + N  +S     + V+ 
Sbjct: 207 RQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNS 266

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   Y+E+  + + PN      ++  FCK      A ++F++M   G  P+V  YN+L+ 
Sbjct: 267 AFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMD 326

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G    G    A+     M + G+ P+  T + ++ G C  G++  A R    ++   V+ 
Sbjct: 327 GAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNL 386

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N   YN LI+ Y + GN E   +    M   G++ ++++Y++LI G  K GK + A  + 
Sbjct: 387 NAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIY 446

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++    + PN  TY+ALI G       + AF+ +K MI +G  PN     +L+   C+ 
Sbjct: 447 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRE 506

Query: 487 EDFDRAAEVLLE-----------------MLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
                A   ++E                   E+ + P+S I   L  GL+  G+   A K
Sbjct: 507 NRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGK 566

Query: 530 LFRKMEIRGLLPKGF 544
           LF  M   G++   F
Sbjct: 567 LFSYMRKSGMISDSF 581



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 160/358 (44%), Gaps = 2/358 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           ++L G++ +       +LFD +L   R    S + ++ L     ++     A + + QM 
Sbjct: 148 AVLDGLVKARRSRCAWELFDEMLR--RGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMV 205

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P + +    +  L +   +  A   +  M+   + PN YT N++M   C+   + 
Sbjct: 206 ARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVN 265

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +++ + + G IP+   + TLI G C     S A      M + G+ P V  +N+L+
Sbjct: 266 SAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLM 325

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  + G   EA  ++ EM    + P+  T + ++ G    G  ++ A   E +  +G+ 
Sbjct: 326 DGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVN 385

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           ++   YNALI   C+ G  ++A      + +  + PN  +YS+LI G       + A  +
Sbjct: 386 LNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAI 445

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           Y  M+  G  PN   +  L+    +N   D A     EM+E  ++P++I +S L  GL
Sbjct: 446 YTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 201/419 (47%), Gaps = 29/419 (6%)

Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMC 189
           V+  +P++ T  T+   L+ L + ++ KS+ + L+ +L    +   S  F+++++ +   
Sbjct: 241 VEGVRPNAATYGTY---LYGLCRAKQVKSAWNFLQ-MLCQRGYPCNSYCFNAVIHGF--- 293

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
                          H  +   A + F  M+  GF+P + S +  +  L   ++ D+  G
Sbjct: 294 --------------CHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGL--CKQGDVLTG 337

Query: 250 FYK--EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +Y   EM RN I+PN+ + + ++H  C+ G +E A E+FK ++  GF      Y+ ++ G
Sbjct: 338 YYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHG 397

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C    L +     N M  +   P+   +++LI+ +C+  +L EA  +F  M    + PN
Sbjct: 398 CCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPN 457

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVT   L++G+   G         +++ + G+  ++ TY  +I GLCK  K      +  
Sbjct: 458 VVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFA 517

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+ K   VP+   YS +I G     + + AF+LY  M+  G +PN   +  L++  C ++
Sbjct: 518 DMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDD 577

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLPKGF 544
                  +   M+ + + PD I+ + L +   +C +  +  A+++FR+ME  GL    F
Sbjct: 578 KLPEVMTLFKHMIGEGLTPDRILYTSLIAC--YCKRSNMKAALEIFREMETEGLSADSF 634



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/352 (25%), Positives = 169/352 (48%), Gaps = 6/352 (1%)

Query: 193 PLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           P V+  + + +     F +A  T+ + +  G    ++ CN  L  L++  ++      + 
Sbjct: 143 PQVYATVIRVFVELSMFEDALVTYVEAKKVGVE--LQVCNFLLKGLVEGNQIMYVRSLFD 200

Query: 253 EMRRNRISPNVYTLNMVMHAF---CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           +M+ +  SPN+Y+ +++M  +    KL  +E A E+   ME  G  P+  TY T + G C
Sbjct: 201 DMKISGPSPNIYSYSVLMSMYTHGAKL-CLEEAQELLSEMEVEGVRPNAATYGTYLYGLC 259

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A  F  ++ + G   N   FN +I GFC  G++H+A  +F  MK     P+V 
Sbjct: 260 RAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVH 319

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           +Y+ L++G  + G+   G  +  EM RNGI  ++++Y++L+ GLC+ G+ + A  L K L
Sbjct: 320 SYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRL 379

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
                  +   YS ++ G C   + E  + L+  M+     P+ + +  L+  +C++   
Sbjct: 380 KDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQL 439

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             A EV   M+   + P+ +  + L  G  + G    A     K+   G++P
Sbjct: 440 KEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVP 491



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 166/337 (49%), Gaps = 14/337 (4%)

Query: 212 ATDTFCQMRDYGFLP-------IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           A + F +++D GF         ++  C + L        ++I    + +M  +   P+ Y
Sbjct: 372 AFELFKRLKDQGFKHDHIVYSIVLHGCCQHLD-------LEICYDLWNDMVHHNFVPDAY 424

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             + +++A+C+   ++ A+EVF+ M   G  P+V T   L+ G  N+GL+  A  F + +
Sbjct: 425 NYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKV 484

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
            + G+ PN+ T+  +I G CK  K ++   IF++M      P+ V Y+ +I+G+ +  + 
Sbjct: 485 RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDL 544

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    LY +M+  G K +I TY +LI GLC + K  +   L K +    L P+   Y++L
Sbjct: 545 QEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSL 604

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I   C R N + A ++++ M   G   +  ++  L+  F +    D A   + EM+ K +
Sbjct: 605 IACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGL 664

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            P  +  ++L  G    G ++ AM ++  M   G+ P
Sbjct: 665 TPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/394 (23%), Positives = 184/394 (46%), Gaps = 8/394 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD--LLFKTYAHRKKF--RNATDTFC 217
           +L+G+++ +       LFD +    ++   SP ++   +L   Y H  K     A +   
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDM----KISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLS 237

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G  P   +   +L  L  +++V  A  F + + +     N Y  N V+H FC  G
Sbjct: 238 EMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDG 297

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
            + +AVEVF  M+  GF+P V +Y+ L+ G C +G +         M +NGI PN+++++
Sbjct: 298 QVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYS 357

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +L+ G C+ G++  A  +F  +K      + + Y+ +++G  Q  + E+   L+ +M+ +
Sbjct: 358 SLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHH 417

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
               D   Y++LI   C+  + K+A  + + +  + + PN  T + L+ G         A
Sbjct: 418 NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEA 477

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           F     + + G  PN   + ++++  C+    +    +  +M+++   PD+++ S +  G
Sbjct: 478 FLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDG 537

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
                  + A +L+ KM   G  P  F     IN
Sbjct: 538 FVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLIN 571



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 123/277 (44%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L   Y   ++ + A + F  M   G  P + +C   +    +   +  A  F  ++R+  
Sbjct: 429 LIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFG 488

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
           + PN+ T  ++++  CK+        +F +M   G++P    Y+ +I G      L  A 
Sbjct: 489 VVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAF 548

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           +    M   G +PN+ T+ +LI G C   KL E   +F  M    ++P+ + Y +LI  Y
Sbjct: 549 RLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACY 608

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            +  N +    ++ EM   G+  D   Y  LI G  K      A   ++++    L P  
Sbjct: 609 CKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTV 668

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            TY+ LI G     + ++A  +Y SM+++G  P+  +
Sbjct: 669 VTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKL 705



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 84/188 (44%), Gaps = 12/188 (6%)

Query: 180 DSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           D++LYS        ++ D   K    ++ FR     + +M D G  P I +    ++ L 
Sbjct: 527 DTVLYS--------IIIDGFVKALDLQEAFR----LYYKMVDEGTKPNIFTYTSLINGLC 574

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
             +++   +  +K M    ++P+      ++  +CK   ++ A+E+F+ ME+ G      
Sbjct: 575 HDDKLPEVMTLFKHMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSF 634

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            Y  LI G      +  A  F   M   G+ P V+T+  LI G+ K G   +A  +++ M
Sbjct: 635 VYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSM 694

Query: 360 KATNVSPN 367
               ++P+
Sbjct: 695 LQAGIAPD 702


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 189/417 (45%), Gaps = 19/417 (4%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY---------------- 186
           +S ++H   ++     +E ++R  ++ D  D P   + S+++ Y                
Sbjct: 377 YSNIIHAHCQSGNMDRAEELVRE-MEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERL 435

Query: 187 RMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
           + C  +P +  +  L   Y    K   A     +M  YG     ++ +  +S  +     
Sbjct: 436 KECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDF 495

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
             A   ++EM ++ + P+    N+++ AFCK+G ++RA+ + + M+     PS   +  +
Sbjct: 496 ANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPI 555

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I G    G +  A+   +LM ++G  P V+T+N LI G  KK ++  A  + ++M    +
Sbjct: 556 IEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGI 615

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           +PN  TY  ++ GY   G+       + ++   G+K+D+  Y  L+   CK G+ + A  
Sbjct: 616 TPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALA 675

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + +++    +  N   Y+ LI G   R +   A  L K M   G  PN H +   ++  C
Sbjct: 676 VTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINACC 735

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  D  RA +V+ EM +  + P+    + L  G       + A+K F +M++ GL P
Sbjct: 736 KAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKP 792



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 16/334 (4%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+   ++ G +    F     +F+ +L S    D +  +++LL + +        A    
Sbjct: 480 KTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRA--IYNLLIEAFCKMGNMDRAIRIL 537

Query: 217 CQMR-------DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
            +M+       +  F PIIE      +   D +R   AL     MRR+  +P V T N +
Sbjct: 538 EKMQKERMQPSNRAFRPIIEG----FAVAGDMKR---ALNILDLMRRSGCAPTVMTYNAL 590

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +H   K   +ERAV V   M   G  P+  TY  ++ G+   G +  A ++   +++ G+
Sbjct: 591 IHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGL 650

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           + +V  + TL+   CK G++  A  +  EM    ++ N   YN LI+G+ + G+    A 
Sbjct: 651 KLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAAD 710

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L ++M  +G+  +I TY + I   CK G  ++A  +++++    L PN  TY+ LI G  
Sbjct: 711 LMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWA 770

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                +RA + ++ M  +G +P++  +  L+++ 
Sbjct: 771 KASLPDRALKSFEEMKLAGLKPDEAAYHCLVTSL 804



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/357 (24%), Positives = 160/357 (44%), Gaps = 8/357 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + +  VF  L   YA  +  R       +M+  G    I + +  ++          
Sbjct: 298 RGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIAGFAKINDAQS 357

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KE +      N    + ++HA C+ G ++RA E+ + ME  G    +  Y++++ 
Sbjct: 358 ADNLFKEAKAKLGDLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMH 417

Query: 307 GHC----NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           G+      K  L +  + K         P++I++  LI  + K GK+ +A  I  EM++ 
Sbjct: 418 GYTIIQDEKKCLIVFERLKECC----FTPSIISYGCLINLYIKIGKVTKAIAISKEMESY 473

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            +  N  TY+ LI+G+  + +     S++EEML++G++ D   YN LI   CK G   +A
Sbjct: 474 GIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRA 533

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             +++ + K  + P+   +  +I G  V  + +RA  +   M RSGC P    +  L+  
Sbjct: 534 IRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHG 593

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             +    +RA  VL +M    + P+    + +  G    G    A + F K++  GL
Sbjct: 594 LIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGL 650



 Score =  111 bits (278), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 138/296 (46%), Gaps = 2/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ MR   I PN +    ++HA+     +   +   + M++ G   ++ TY+ +I+
Sbjct: 288 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIA 347

Query: 307 GHCN-KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G        S    FK    K G   N I ++ +I   C+ G +  A  +  EM+   + 
Sbjct: 348 GFAKINDAQSADNLFKEAKAKLG-DLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGID 406

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
             +  Y+++++GY  + + +    ++E +        I++Y  LI    K GK  KA  +
Sbjct: 407 APIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIAI 466

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
            K+++   +  N  TYS LI+G     +   AF +++ M++SG +P++ I+ +L+  FC+
Sbjct: 467 SKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCK 526

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + DRA  +L +M ++ M P +     +  G    G  + A+ +   M   G  P
Sbjct: 527 MGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAP 582



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 89/210 (42%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   F  +I  + K+G  H A   F  M+A  + PN   + +L++ Y    +     S
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
             EEM   GI++ I+TY+ +I G  K    + A  L K+        N   YS +I   C
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
              N +RA +L + M   G       +  +M  +   +D  +   V   + E C  P  I
Sbjct: 386 QSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 445

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               L +     GK   A+ + ++ME  G+
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGI 475


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 143/262 (54%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               ++EMRR  + PN+YT N ++  +C+ G  ERA  +F  M   G + +V +YNTLI+
Sbjct: 92  GFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIA 151

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A K  ++M   G +P++ITFN L+ G+ K GK+  A   F++MKA    P
Sbjct: 152 GLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYN LI G+ +  +         +M   G++   +TY  LI    +E    KA  ++
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL 271

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             ++K  L  +A TY  L+   C+  N + A +L++SM   G  P+  I++M++  + + 
Sbjct: 272 AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGRE 331

Query: 487 EDFDRAAEVLLEMLEKCMAPDS 508
               +A ++++EM +K + P+S
Sbjct: 332 GSSYKALKLIMEMRQKGLIPNS 353



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +C   ++       V  A   + EM    ++PN  T   +MH +   G  E+   +F+
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P++ TYN LI   C  G    A    + M   GI  NV+++NTLI G C+ G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A ++   M+     P+++T+N L++GYG+ G        + +M   G +   +TYN
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G C+     +A   + D+ +  L P   TY+ LI       +  +AF++   M ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   + H + +L+   C   +   A ++   M EK + P ++I   +  G    G    A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337

Query: 528 MKLFRKMEIRGLLP 541
           +KL  +M  +GL+P
Sbjct: 338 LKLIMEMRQKGLIP 351



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 129/280 (46%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V     +++  CK G +  A  VF  M  +G  P+  TY  L+ G+   G         
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G++PN+ T+N LI  +C+ G+   A  +F EM    +  NVV+YNTLI G  + 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G     A L + M   G +  I+T+N L+ G  K GK   A      +      P+A TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C  ++  RA +    M   G  P K  + +L+ +F +     +A E+L  M +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  D+     L   L   G  + A KLF+ M  +G+ P
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEP 316



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 4/305 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +    +F  A   F +M   G +  + S N  ++ L    ++  A      MR
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P++ T N+++  + K G +  A+  F  M++ GF PS  TYN LI+G C    ++
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M++ G++P  +T+  LI  F ++  + +A  I + M+   +  +  TY  L+
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 GN +    L++ M   G++   + Y+ +I G  +EG + KA  L+ ++ +  L+
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSM--IRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           PN+++Y   I   C     + A  L   M  IRS      H   +   +  Q +D D+  
Sbjct: 351 PNSASYGLTIRVLCKDDKCQEAEALLDDMETIRS--FAGHHQNFIASKSDSQQKDEDKCT 408

Query: 494 EVLLE 498
           E  L+
Sbjct: 409 EHFLQ 413



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 39/259 (15%)

Query: 176 SKLFDS--ILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
            KL+D+  +L   R   + P  + F+LL   Y    K  NA   F QM+  GF       
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF------- 209

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
                                        P+  T NM++  FC+   + RA     +M+ 
Sbjct: 210 ----------------------------QPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TY  LI     +  +  A +    MEK G++ +  T+  L+   C +G + +
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++F  M    V P+ V Y+ +I GYG+ G+S     L  EM + G+  +  +Y   I 
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361

Query: 412 GLCKEGKTKKAAYLVKDLD 430
            LCK+ K ++A  L+ D++
Sbjct: 362 VLCKDDKCQEAEALLDDME 380



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 394 MLRNGIK-----VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           ML  G K     +D+    AL+ G CK G   +A  +  ++    L PN  TY+AL+ G 
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                 E+ F L++ M R G  PN + +  L+  +C+  +F+RA  +  EM  + +  + 
Sbjct: 84  FTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNV 143

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  + L +GL   GK   A KL   M   G  P
Sbjct: 144 VSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)

Query: 343 FCKKGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            C  G +  A  + +   K+ + + +V     L+NG  + G+      +++EM   G+  
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +TY AL+ G    G+ +K   L +++ +  + PN  TY+ LI   C     ERA  L+
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G   N   +  L++  C++     AA++L  M  +   P  I  + L  G    
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A+  F +M+  G  P
Sbjct: 192 GKMSNALPFFNQMKAAGFQP 211


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 202/428 (47%), Gaps = 25/428 (5%)

Query: 138 LTLETHSIVLHILTK------NRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRM--- 188
           ++L T+SIV+    K      +     +ES++R  ++ +  D P  ++ +++  Y M   
Sbjct: 370 MSLVTYSIVVGGFAKIGNADQSCNMDRAESLVRE-MEEEGIDAPIDIYHTMMNGYTMIGN 428

Query: 189 -------------CDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
                        C  +P V  +  L   Y    K   A +    M   G    +++ + 
Sbjct: 429 EEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSM 488

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            ++  L  +    A   ++++ ++ + P+V   N ++ AFC +G ++RA+ + K M+   
Sbjct: 489 LINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKR 548

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+  T+  +I G    G +  A++  ++M ++G  P V TFN L+ G  +K ++ +A 
Sbjct: 549 HRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAV 608

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            I  EM    VSP+  TY T++NGY  +G++      + ++   G+++D+ TY AL+   
Sbjct: 609 EILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKAC 668

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           CK G+ + A  + +++   ++  N   Y+ LI G   R +   A  L + M + G +P+ 
Sbjct: 669 CKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDI 728

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
           H +   ++  C+  D  RA + + EM    + P+    + L  G       E A++ F +
Sbjct: 729 HTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEE 788

Query: 534 MEIRGLLP 541
           M++ GL P
Sbjct: 789 MKLAGLKP 796



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 169/350 (48%), Gaps = 6/350 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F L+   YA R     A  TF  MR  G  P        + +      ++ AL   ++M+
Sbjct: 305 FGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSCVRKMK 364

Query: 256 RNRISPNVYTLNMVMHAFCKLG------IIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +  ++ T ++V+  F K+G       ++RA  + + ME  G    +  Y+T+++G+ 
Sbjct: 365 EEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTMMNGYT 424

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
             G     +     +++ G  P+VI++  LI  + K GK+ +A  +   M++  +  N+ 
Sbjct: 425 MIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMK 484

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+ LING+ ++ +     +++E+++++G+K D++ YN +I   C  G   +A ++VK++
Sbjct: 485 TYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 544

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
            K    P + T+  +I G        RA +++  M RSGC P  H F  L+    +    
Sbjct: 545 QKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQM 604

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           ++A E+L EM    ++PD    + + +G    G    A + F K+   GL
Sbjct: 605 EKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGL 654



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 147/323 (45%), Gaps = 35/323 (10%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   +   K + NA   F  +   G  P +   N  + +      +D A+   KEM+
Sbjct: 486 YSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQ 545

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R  P   T   ++H F + G + RA+E+F  M   G IP+V T+N L+ G   K  + 
Sbjct: 546 KKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQME 605

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGF-------------------------------- 343
            A++  + M   G+ P+  T+ T++ G+                                
Sbjct: 606 KAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALL 665

Query: 344 ---CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK G++  A  +  EM A N+  N   YN LI+G+ + G+    A L ++M + G++
Sbjct: 666 KACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQ 725

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            DI TY + I   CK G   +A   +++++   + PN  TY+ LI G       E+A + 
Sbjct: 726 PDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRC 785

Query: 461 YKSMIRSGCRPNKHIFEMLMSTF 483
           ++ M  +G +P+K ++  LM++ 
Sbjct: 786 FEEMKLAGLKPDKAVYHCLMTSL 808



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 137/287 (47%), Gaps = 6/287 (2%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P      +++  + + G + RA + F++M   G  PS   Y +LI  +     +  A+  
Sbjct: 300 PARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYTSLIHAYAVGRDMEEALSC 359

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKG------KLHEANRIFSEMKATNVSPNVVTYNTL 374
              M++ G++ +++T++ ++ GF K G       +  A  +  EM+   +   +  Y+T+
Sbjct: 360 VRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPIDIYHTM 419

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +NGY  +GN E    +++ +   G    +++Y  LI    K GK  KA  + K ++   +
Sbjct: 420 MNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKMMESAGI 479

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             N  TYS LI G    K+   AF +++ +I+ G +P+  ++  ++  FC   + DRA  
Sbjct: 480 KHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 539

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++ EM +K   P S     +  G    G+   A+++F  M   G +P
Sbjct: 540 MVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIP 586



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/268 (27%), Positives = 123/268 (45%), Gaps = 2/268 (0%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           +A   + R A + F  MR  G +P + + N  +  L++  +++ A+    EM    +SP+
Sbjct: 563 FARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPD 622

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
            +T   +M+ +  LG   +A E F  + + G    V TY  L+   C  G +  A+    
Sbjct: 623 EHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTR 682

Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
            M    I  N   +N LI G+ ++G + EA  +  +MK   V P++ TY + IN   + G
Sbjct: 683 EMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAG 742

Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           +        +EM   G+K ++ TY  LI G       +KA    +++    L P+ + Y 
Sbjct: 743 DMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYH 802

Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCR 470
            L+T    R     A+ +Y S I S CR
Sbjct: 803 CLMTSLLSRATVAEAY-IY-SGILSICR 828



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/131 (22%), Positives = 60/131 (45%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
            V+++L   +A R     A D   QM+  G  P I +   F+++   +  +  A    +E
Sbjct: 694 FVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQE 753

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PNV T   ++H +    + E+A+  F+ M+  G  P    Y+ L++   ++  
Sbjct: 754 MEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRAT 813

Query: 314 LSLAMKFKNLM 324
           ++ A  +  ++
Sbjct: 814 VAEAYIYSGIL 824


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 30/342 (8%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  + +LL    V   +  Y  MR++ + PNV+T N+++ A C+   +  A ++   M  
Sbjct: 132 NHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMAR 191

Query: 292 MGFIPSVTTYNTLISGHC----------------------NKGLLSLAMKFK-------- 321
            G  P   TY T++S  C                      N  +L+L  +F+        
Sbjct: 192 KGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVV 251

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M   G+QPNVIT+ T++  FCK G+L  A  I + M  T  +PNVVT+  L+ G    
Sbjct: 252 SDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDD 311

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G       ++  M+  G     ++YN LI GLC  G  K A+ ++  ++++   PN  TY
Sbjct: 312 GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTY 371

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           S LI G     +   A  ++  M RSGC+PN  ++  ++  FC+   F++A  ++ +ML 
Sbjct: 372 STLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 431

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           +   P+++  + L   L  C +   A+ +F +M   G +P G
Sbjct: 432 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 166/354 (46%), Gaps = 12/354 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   +    + R A     +M   G  P + +    +  L D  RV  AL  ++ 
Sbjct: 264 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 323

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     +P+  + N+++   C +G ++ A  +  +ME  G  P+V TY+TLI G    G 
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 383

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A+   N M ++G +PNV+ +  ++  FCKK   ++A  +  +M   N  PN VT+NT
Sbjct: 384 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 443

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI              ++ EM R+G   +  TYN LI GL +EG    A ++V ++  + 
Sbjct: 444 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 503

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           +  +  TY+ +++G C  + S  A      MI  G +PN   F  ++  +C+  +   AA
Sbjct: 504 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 563

Query: 494 EVLLEM----LEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
            +L  M      + +   +I+++EL      C +D+L  AM    KM   G+ P
Sbjct: 564 WMLGAMNVVNCHRNILVYTILMAEL------CNQDKLVDAMTYLLKMLYEGIYP 611



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/397 (24%), Positives = 172/397 (43%), Gaps = 7/397 (1%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++R +  ++      K+ D +  + + C    + +  +        +   AT+    M  
Sbjct: 169 LVRALCQNNRVGAARKMLDEM--ARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP- 225

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P+  S N  + +L    R+        +M    + PNV T   ++ AFCK G +  
Sbjct: 226 ----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRM 281

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M   G  P+V T+  L+ G  + G +  A+     M   G  P+ +++N LI 
Sbjct: 282 ACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIR 341

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G C  G L  A+ I + M+     PNV TY+TLI+G+ + G+     S++ +M R+G K 
Sbjct: 342 GLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKP 401

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           +++ Y  ++   CK+    +A  L+  +   +  PN  T++ LI   C  +   RA  ++
Sbjct: 402 NVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVF 461

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M R GC PN   +  L+    +  +   A  ++ EM    +    +  + + SGL   
Sbjct: 462 HEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQT 521

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
                AM    KM ++G+ P  F     I+   + GE
Sbjct: 522 RMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGE 558



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 154/330 (46%), Gaps = 10/330 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSI-LYSYRMCDS---SPLVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D        ++ D++ ++ + + +    S + +++L +        + A+   
Sbjct: 303 ALVRGLFDD------GRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSIL 356

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M  +G  P + + +  +     +  +  A+  + +M R+   PNV     ++  FCK 
Sbjct: 357 NSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKK 416

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
            +  +A  +   M      P+  T+NTLI   C+   +  A+   + M ++G  PN  T+
Sbjct: 417 LMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY 476

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N LI G  ++G   +A  + +EM++  +  ++VTYNT+++G  Q   S        +M+ 
Sbjct: 477 NELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIV 536

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            GI+ +  T++A+I   CKEG+ + AA+++  ++  +   N   Y+ L+   C +     
Sbjct: 537 QGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVD 596

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           A      M+  G  PN   + +L+    +N
Sbjct: 597 AMTYLLKMLYEGIYPNTVTWNVLVRGVFRN 626


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 5/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+  S   D  ++++  ++ +  + D   ++++ L K + H  +   A   +  M 
Sbjct: 305 TMIHGLCRSTDVDSAARVYSEMIKTGLVPDV--VIYNSLLKGFCHAGRVGEAWKFWDSMS 362

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGII 279
             G +  + S N  L  L D   VD A   ++ + ++  +SP++ T + ++H  C+ G  
Sbjct: 363 VSG-IRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFA 421

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            +++++ +   + G      +Y+++ISG C  G L  A+K    +  +  +PN   +N L
Sbjct: 422 NKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNAL 481

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFC+  K  +A R++S+M   + SP  +TYNTLI+G  +       +    EML  G 
Sbjct: 482 INGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGC 541

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
            +D+ TY +LI GLC++ K   A  L   +    L  +   ++ LI G C     + A Q
Sbjct: 542 MLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQ 601

Query: 460 LYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           L   M  ++ C PN   +  LM  F +   FD+AA + + +LE  + PD I  +    GL
Sbjct: 602 LLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGL 661

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
             C +    ++L  +M   G++P
Sbjct: 662 CSCNRTPEGVQLLNEMLASGIIP 684



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 75/433 (17%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGF----LPIIESCNKFLSSL 238
           L S+  C+      + L   +   ++F +A   F  +    F     P +++ N  L SL
Sbjct: 110 LPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSL 169

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
                +D A+  +  +R   ++P+  T + +M  F K   ++ A+ +   M S    P  
Sbjct: 170 CVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDA 229

Query: 299 TTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
             YN L+ G    G    AM+ ++ L+   G  PN+ T+N ++ G CK G   EA  ++ 
Sbjct: 230 VCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWE 289

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            M A N  P+++TY T+I+G  +  + +  A +Y EM++ G+  D++ YN+L+ G C  G
Sbjct: 290 RMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAG 349

Query: 418 K----------------------------------TKKAAYLVKDLDK-NSLVPNASTYS 442
           +                                    KA  L + L+K +SL P+  T+S
Sbjct: 350 RVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFS 409

Query: 443 ALITGQCVRKNSERAFQL---------------YKSMIRSGC------------------ 469
            +I G C +  + ++ Q+               Y SMI   C                  
Sbjct: 410 TMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMD 469

Query: 470 --RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
             +PN HI+  L++ FCQ   F  A  V  +M E   +P +I  + L  GL    K   A
Sbjct: 470 SFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEA 529

Query: 528 MKLFRKMEIRGLL 540
            +  R+M  +G +
Sbjct: 530 SRFTREMLEKGCM 542



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 114/215 (53%), Gaps = 1/215 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++    + +   A+  Y +M  N  SP   T N ++H  CK      A    + M  
Sbjct: 479 NALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLE 538

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G +  V TY +LI G C    +  A+   N +   G+Q +V+  N LI G C  GK+ E
Sbjct: 539 KGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDE 598

Query: 352 ANRIFSEMKA-TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           A+++ SEMK   N  PNVVTYNTL++G+ + G  +  ASL+  +L NG+  DI++YN  I
Sbjct: 599 ASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRI 658

Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            GLC   +T +   L+ ++  + ++P A T++ L+
Sbjct: 659 KGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 155/336 (46%), Gaps = 18/336 (5%)

Query: 154 RKFKSSESILRGILDSDSFDLPSKLF------DSILYSYRMCDSSPLVFDLLFKTYAHR- 206
           R   S   +L+G+ D    D  + L+      DS+  S  M   S ++  L  K +A++ 
Sbjct: 367 RNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSL--SPDMVTFSTMIHGLCEKGFANKS 424

Query: 207 -KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYT 265
            +    A  +  ++ ++ +       +  +S L    R+D A+  Y+++  +   PN + 
Sbjct: 425 LQILEEARTSGKELDEFSY-------SSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHI 477

Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
            N +++ FC+      A+ V+  M      P+  TYNTLI G C       A +F   M 
Sbjct: 478 YNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREML 537

Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
           + G   +V T+ +LI G C+  K+  A  +++++    +  +VV +N LI+G    G  +
Sbjct: 538 EKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVD 597

Query: 386 MGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
             + L  EM  +N    +++TYN L+ G  + G   KAA L   + +N LVP+  +Y+  
Sbjct: 598 EASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTR 657

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           I G C    +    QL   M+ SG  P    + +L+
Sbjct: 658 IKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 121/264 (45%), Gaps = 3/264 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  S++ G+      D   KL++ I  S      +  +++ L   +    KF +A   + 
Sbjct: 442 SYSSMISGLCKDGRLDDAVKLYEKI--SMDSFKPNSHIYNALINGFCQASKFSDAIRVYS 499

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           QM +    P   + N  +  L  +E+   A  F +EM       +V T   ++   C+  
Sbjct: 500 QMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDK 559

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM-EKNGIQPNVITF 336
            I+ A+ ++  +   G    V  +N LI G C+ G +  A +  + M EKN   PNV+T+
Sbjct: 560 KIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTY 619

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NTL+ GF + G   +A  ++  +    + P++++YNT I G      +  G  L  EML 
Sbjct: 620 NTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLA 679

Query: 397 NGIKVDILTYNALILGLCKEGKTK 420
           +GI    +T+N L+  + K G  +
Sbjct: 680 SGIIPTAITWNILVRAVIKYGPIQ 703


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 156/313 (49%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P I   N  + S    E    A   Y ++    I P++ T   ++  FC+ G      ++
Sbjct: 222 PNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQL 281

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M +    P+V T+N LI   C KG +  A    NLM K G QP+++TFNTLI G C 
Sbjct: 282 MCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCL 341

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G + EA ++F  +    + P+V +Y  LI GY +    +   SL+ EM    + +DI+ 
Sbjct: 342 HGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVL 401

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++LI GLCK G+   A  L   ++ +   PN  TY+ LI   C  ++ +   +L+K M 
Sbjct: 402 YSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMC 461

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G  P    + +L++ +C+++    A  +L  M  K +APDSI  + L+ GL   G+  
Sbjct: 462 GKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRIS 521

Query: 526 LAMKLFRKMEIRG 538
            A +LF+ M + G
Sbjct: 522 DAWELFKVMHVGG 534



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 147/295 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    +EM    + PN+   NM++ +FCK  +  +A +++  +  MG  P + TY +LI 
Sbjct: 208 AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIR 267

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G      +    M    I PNV TFN LI  FC+KGK+ EA  +F+ M      P
Sbjct: 268 GFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP 327

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VT+NTLI+G+   GN      L++ +   GI  D+ +Y  LI+G CK  +  +A  L 
Sbjct: 328 DIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++   ++V +   YS+LI G C       A++L+ ++   G  PN   + +L+  FC+ 
Sbjct: 388 NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI 447

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +D D   E+   M  K + P  +  + L +G     +   AM L   M+ + L P
Sbjct: 448 QDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAP 502



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 35/330 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++++  ++   +    A D + ++ D G  P I +    +     + +         E
Sbjct: 225 VIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCE 284

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I+PNVYT N+++ AFC+ G +  A  +F  M   G  P + T+NTLISGHC  G 
Sbjct: 285 MVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGN 344

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV--------- 364
           +  A K  + + + GI P+V ++  LI G+CK  ++ EA  +F+EM+  N+         
Sbjct: 345 VLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS 404

Query: 365 --------------------------SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                                      PNV+TYN LI+ + ++ + +MG  L++ M   G
Sbjct: 405 LIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKG 464

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +   +LTYN LI G CK  + ++A  L+  +   +L P++ TY++L  G C       A+
Sbjct: 465 LTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAW 524

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +L+K M   G   +   + +L+  FC+ +D
Sbjct: 525 ELFKVMHVGGPPVDVATYNVLLDAFCKAQD 554



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 162/316 (51%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           LP +   N  + S++  +   +A+   K+M    ++P+++TL++ ++ +C LG +  A  
Sbjct: 81  LPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFS 140

Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
           V   +   G+ P+  T  T++ G C  G +  AM F + +   G+  + + + TLI G C
Sbjct: 141 VLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLC 200

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
           K G+  +A ++  EM+   V PN+V YN +I+ + +   +     LY +++  GI  DIL
Sbjct: 201 KIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDIL 260

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TY +LI G C+ G+  +   L+ ++   ++ PN  T++ LI   C +     A  ++  M
Sbjct: 261 TYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLM 320

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           ++ G +P+   F  L+S  C + +   A ++   + E+ + PD    + L  G   C + 
Sbjct: 321 VKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRI 380

Query: 525 ELAMKLFRKMEIRGLL 540
           + A+ LF +M  + ++
Sbjct: 381 DEAVSLFNEMRCKNMV 396



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 160/350 (45%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ +  +    K    A     QM   G  P I + + +++       +  A    
Sbjct: 83  SVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVL 142

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             + +    PN  TL  VM   C  G +++A++   N+ + G +     Y TLI+G C  
Sbjct: 143 GIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKI 202

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G    A +    ME   ++PN++ +N +I  FCK     +A  ++ ++    + P+++TY
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
            +LI G+ + G       L  EM+   I  ++ T+N LI   C++GK  +A  +   + K
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
               P+  T++ LI+G C+  N   A +L+ ++   G  P+   + +L+  +C+ +  D 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           A  +  EM  K M  D ++ S L  GL   G+   A +LF  +   G  P
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPP 432



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 5/333 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDS-ERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           AT T  +   + FL     C K  + +L S   +D A+  +  +   +  P+V   N ++
Sbjct: 32  ATTTRLRYAFHKFLRFFSHCPKQNAKILSSFNGIDDAVTLFNHLINMQPLPSVIQFNTII 91

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
            +  K+     A+ + K M   G  PS+ T +  I+ +C+ G +  A     ++ K G Q
Sbjct: 92  GSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQ 151

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN IT  T++ G C  G++ +A      + A  +  + V Y TLING  ++G S     L
Sbjct: 152 PNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQL 211

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
            +EM    +K +I+ YN +I   CK+  T KA  L   +    + P+  TY++LI G C 
Sbjct: 212 LQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCR 271

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
                   QL   M+     PN + F +L+  FC+      A  +   M+++   PD + 
Sbjct: 272 TGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVT 331

Query: 511 LSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
            + L SG  HC  G    A KLF  +  RG+LP
Sbjct: 332 FNTLISG--HCLHGNVLEARKLFDTVFERGILP 362


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 35/359 (9%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L  TY  +K      +   +M   G  P + +    +  L  +  +      + E++
Sbjct: 171 YNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIK 230

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY-------------- 301
           R  ++ +VY  + V++A+C+ G + RA EVF      G  P+  TY              
Sbjct: 231 RKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIE 290

Query: 302 ---------------------NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                                NT+I G+C  G++  A++ K +ME+ GIQ +V T+NTL 
Sbjct: 291 AAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLA 350

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C+  ++ +A ++   M    V  N V+Y TLI+ + + G+      L+ +M   G +
Sbjct: 351 CGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSR 410

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++TYN +I G  K G  ++A    K+++K  LVP+  TY+AL+ G CV    + A +L
Sbjct: 411 PSVVTYNVMIDGYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRL 470

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           ++ M + G +PN   +  L+S   +    + A +    ML   + PD  + S L   LH
Sbjct: 471 FEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLH 529



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 4/292 (1%)

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           KEM    + P V T  +++      G I +   VF  ++       V  Y+ +I+ +C  
Sbjct: 192 KEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRA 251

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A +  +    NGI+PN  T+  LI GFCK G++  A  + ++M+   V  N + +
Sbjct: 252 GNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIF 311

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           NT+I+GY + G  +    +   M R GI++D+ TYN L  GLC+  + + A  L+  + +
Sbjct: 312 NTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTE 371

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           N +  N  +Y+ LI+      +   A +L++ M   G RP+   + +++  + ++     
Sbjct: 372 NGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIRE 431

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
           A     EM +K + PD    + L  G  HC  GK ++A++LF +M+ RG  P
Sbjct: 432 AERFKKEMEKKGLVPDVYTYAALVHG--HCVNGKVDVALRLFEEMKQRGAKP 481



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 100/217 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F+ +   Y        A +    M   G    + + N     L    R++ A      
Sbjct: 309 IIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHI 368

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N +  N  +   ++    K G +  A  +F++ME  G  PSV TYN +I G+   G 
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +FK  MEK G+ P+V T+  L+ G C  GK+  A R+F EMK     PNVV Y  
Sbjct: 429 IREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTA 488

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           LI+G  + G SE     Y+ ML  G+  D   Y+ L+
Sbjct: 489 LISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV 525



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 110/238 (46%)

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           + ++ G C  G +  A +  + M ++G++ N   +N L+  + ++        +  EM++
Sbjct: 137 SVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMES 196

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             V P V TY  L++G    G+     S+++E+ R  +  D+  Y+A+I   C+ G  ++
Sbjct: 197 GGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRR 256

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A+ +  +   N + PN  TY ALI G C     E A  L   M   G   N+ IF  ++ 
Sbjct: 257 ASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMID 316

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
            +C++   D+A E+   M    +  D    + L  GL    + E A KL   M   G+
Sbjct: 317 GYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGV 374



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 101/206 (49%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           ++ + ++ GFCK G++ +A R+  EM    V  N   YN L++ Y +  N    A + +E
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M   G++  + TY  L+ GL   G   K   +  ++ + ++  +   YSA+I   C   N
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             RA +++   + +G  PN+  +  L++ FC+    + A  +L +M  + +  + II + 
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  G    G  + A+++   ME  G+
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGI 339



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 6/165 (3%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           +S+ + +  L   ++       A   F  M   G  P + + N  +   + S  +  A  
Sbjct: 375 ESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAER 434

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
           F KEM +  + P+VYT   ++H  C  G ++ A+ +F+ M+  G  P+V  Y  LISG  
Sbjct: 435 FKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLA 494

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            +G    A +F + M   G+ P+   ++ L+      G LH   R
Sbjct: 495 KEGRSEEAFQFYDNMLAAGLTPDDTLYSMLV------GSLHTDKR 533



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 9/159 (5%)

Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           L+ + ++ G CK G+   A  L+ ++ ++ +  NA  Y+ L+     +KN  R  ++ K 
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M   G  P    + +L+       D  +   V  E+  K +A D    S + +     G 
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253

Query: 524 DELAMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
              A ++F +    G+ P          GF K+  I  A
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAA 292


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 145/269 (53%)

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           + E   N I PN  T  ++++ FCK+G +E A  +  +M+  G   +   +NT+I G+C 
Sbjct: 260 FDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCR 319

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           +G++  A+K K  MEK GI+ +V T+NTL  G C+  ++ EA  +   M    V PN VT
Sbjct: 320 QGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVT 379

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y TLI+ + + G+      L+ EM   G    ++TYN ++ G  K+G  ++A    K+++
Sbjct: 380 YTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEME 439

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           K  LVP+  TY++L+ G CV    + A +L++ M   G  PN   +  L+S   +    +
Sbjct: 440 KKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSE 499

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLH 519
            A ++  +ML+  + PD  + S L   LH
Sbjct: 500 EAFQLYDDMLKAGLTPDDSLYSALVGSLH 528



 Score =  157 bits (398), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 144/289 (49%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++  +   Y      R A++ F +    G  P   +    ++      +++ A     +M
Sbjct: 239 LYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADM 298

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +   +  N    N ++  +C+ G+++ A++V   ME MG    V TYNTL  G C    +
Sbjct: 299 QGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRM 358

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + A    ++M + G+ PN +T+ TLI   CK+G + EA R+F EM      P+VVTYN +
Sbjct: 359 AEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVM 418

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ++GY + G+        +EM + G+  D+ TY +L+ G C  GK   A  L +++     
Sbjct: 419 MDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGT 478

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            PN   Y+ALI+G      SE AFQLY  M+++G  P+  ++  L+ + 
Sbjct: 479 EPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 175/385 (45%), Gaps = 4/385 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  ++ G   S   D    L D +  +  R+   + L ++ L   Y  RK      +  
Sbjct: 134 AASVVVDGFCKSGRVDDARALLDEMPRHGVRL---NALCYNSLLDCYVRRKDDARVQELL 190

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             M + G    + +    + SL  +  +        EM+   ++ +VY    V++A+C+ 
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G + RA EVF      G  P+  TY  LI+G C  G +  A      M+  G+  N I F
Sbjct: 251 GNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIF 310

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NT+I G+C++G +  A ++ + M+   +  +V TYNTL  G  +V       +L   M+ 
Sbjct: 311 NTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIE 370

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+  + +TY  LI   CKEG   +A  L +++     +P+  TY+ ++ G   + +   
Sbjct: 371 KGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIRE 430

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +  K M + G  P+ + +  L+   C N   D A ++  EM  +   P+ +  + L S
Sbjct: 431 AERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALIS 490

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+ E A +L+  M   GL P
Sbjct: 491 GLAKEGRSEEAFQLYDDMLKAGLTP 515



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 106/217 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F+ +   Y  +    NA      M   G    + + N     L    R+  A      
Sbjct: 308 IIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHI 367

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T   ++   CK G +  A  +F+ M   G +PSV TYN ++ G+  KG 
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGS 427

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +F+  MEK G+ P+V T+ +L+ G C  GK+  A ++F EMK     PNVV Y  
Sbjct: 428 IREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTA 487

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           LI+G  + G SE    LY++ML+ G+  D   Y+AL+
Sbjct: 488 LISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 51/115 (44%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++++   Y  +   R A     +M   G +P + +    +     + +VD+AL  +
Sbjct: 411 SVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLF 470

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           +EM+     PNV     ++    K G  E A +++ +M   G  P  + Y+ L+ 
Sbjct: 471 EEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVG 525


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 3/329 (0%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P     N  ++       +  A   +++M+   I P+  T N +++  CKL ++ +A
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKA 245

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            ++   ME  G  PSV T+NTLI  +   G L       + M++ GI+ +VI+F +++  
Sbjct: 246 EDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKA 305

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           FCK GK+ EA  I  +M   +V+PN   YN++I+ Y + G++E    L E+M  +G+   
Sbjct: 306 FCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSAS 365

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           I+TYN L+ GLC+  +  +A  L+  L    L P+  +Y+ +I+  C + ++++A +L +
Sbjct: 366 IVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQ 425

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M + G RP    +  L+S             +  +ML K + P S I   +      C 
Sbjct: 426 EMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCE 485

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
            D     L ++M  +G+    FD  +  N
Sbjct: 486 NDSKVASLKKEMSEKGI---AFDDTKRSN 511



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 156/294 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  + E  +  +    YT +++++  CK G + +A +V + +   G +P+   YNTLI+G
Sbjct: 141 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 200

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C    L  A      M+   I+P+ IT+N LI G CK   + +A  +  EM+ + V P+
Sbjct: 201 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 260

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG  G  E   ++  +M + GIK D++++ +++   CK GK  +A  ++ 
Sbjct: 261 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 320

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    + PNA  Y+++I       ++E+AF L + M  SG   +   + +L+   C++ 
Sbjct: 321 DMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSS 380

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D A E++  +  + + PD +  + + S   + G  + A++L ++M   G+ P
Sbjct: 381 QIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 146/279 (52%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+ ++ N+V+    + G    A++VF  M  MG +P+  TYNT+I GH   G L    + 
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           ++ M  +G +PN++T+N L+ G C+ G++ E   +  EM + ++ P+  TY+ L +G  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G S    SL+ E L+ G+ +   T + L+ GLCK+GK  KA  +++ L    LVP    
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ LI G C  ++   AF +++ M     RP+   +  L++  C+ E   +A ++++EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  + P     + L       G+ E    +   M+ +G+
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 164/369 (44%), Gaps = 9/369 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++++        K  +A   F +M D G +P   + N  +   +    ++       +M 
Sbjct: 19  YNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQML 78

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            +   PN+ T N+++   C+ G ++    +   M S    P   TY+ L  G    G   
Sbjct: 79  HDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESR 138

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +       K G+     T + L+ G CK GK+ +A ++   +  T + P  V YNTLI
Sbjct: 139 TMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLI 198

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY QV +      ++E+M    I+ D +TYNALI GLCK     KA  LV +++K+ + 
Sbjct: 199 NGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVD 258

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T++ LI         E+ F +   M + G + +   F  ++  FC+N     A  +
Sbjct: 259 PSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAI 318

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLPKGFDK 546
           L +M+ K +AP++ + + +       G  E A  L  KM+  G         LL KG  +
Sbjct: 319 LDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCR 378

Query: 547 LRTINCAPE 555
              I+ A E
Sbjct: 379 SSQIDEAEE 387



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 122/257 (47%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D   +M   G  P +E+ N  + +   + +++       +M++  I  +V +   V+ 
Sbjct: 245 AEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVK 304

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           AFCK G I  AV +  +M      P+   YN++I  +   G    A      M+ +G+  
Sbjct: 305 AFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSA 364

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +++T+N L+ G C+  ++ EA  +   ++   + P+VV+YNT+I+     G+++    L 
Sbjct: 365 SIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELL 424

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EM + GI+  + TY+ L+  L   G+      L + +   ++ P++S Y  ++      
Sbjct: 425 QEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRC 484

Query: 452 KNSERAFQLYKSMIRSG 468
           +N  +   L K M   G
Sbjct: 485 ENDSKVASLKKEMSEKG 501



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 119/246 (48%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P   +YN +I+G    G  S A+K  + M   G+ PN IT+NT+I G  K G L    R+
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             +M      PN+VTYN L++G  + G  +    L +EM  + +  D  TY+ L  GL +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+++    L  +  K  ++  A T S L+ G C      +A Q+ + ++ +G  P   I
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L++ +CQ  D   A  +  +M  + + PD I  + L +GL        A  L  +ME
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 536 IRGLLP 541
             G+ P
Sbjct: 254 KSGVDP 259



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 101/212 (47%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S  + F  + K +    K   A      M      P  +  N  + + ++S   + A   
Sbjct: 294 SDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLL 353

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
            ++M+ + +S ++ T N+++   C+   I+ A E+   + + G  P V +YNT+IS  CN
Sbjct: 354 VEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCN 413

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG    A++    M K GI+P + T++TL+      G++H+   ++ +M   NV P+   
Sbjct: 414 KGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSI 473

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           Y  +++ Y +  N    ASL +EM   GI  D
Sbjct: 474 YGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 106/246 (43%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           D S   F+ L   Y    +          M+  G    + S    + +   + ++  A+ 
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
              +M    ++PN    N ++ A+ + G  E+A  + + M++ G   S+ TYN L+ G C
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
               +  A +    +   G++P+V+++NT+I   C KG   +A  +  EM    + P + 
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY+TL++     G       LY++ML   ++     Y  ++    +     K A L K++
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 497

Query: 430 DKNSLV 435
            +  + 
Sbjct: 498 SEKGIA 503



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 46/109 (42%)

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A +Y+ +I G         A +++  M+  G  PN   +  ++    +  D +    +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             +ML     P+ +  + L SGL   G+ +    L  +M    + P GF
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGF 122


>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
          Length = 554

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 19/406 (4%)

Query: 101 STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
           S  +T   V  +L +   D+V +  FF WV T        +++ +++ IL K ++F    
Sbjct: 127 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 186

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
            ++  +++                       S +    + +  A   ++  A D F +M 
Sbjct: 187 GLINQMVEVGGL------------------MSLMTMTKVMRRLAGASRWTEAIDAFHKMD 228

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            +G +   ++ N  L +L     V  A G ++E+R   I P+  + N ++H +CK  +++
Sbjct: 229 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR-GTIPPDENSFNTLVHGWCKARMLK 287

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A++  + M+  GF PSV TY +L+  +C +          + M K    PNV+T+  L+
Sbjct: 288 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 347

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
               K G+  EA   F ++K   V+P+   YN+LI   G+ G  E   S+ EEM   GI 
Sbjct: 348 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 407

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ T+N LI   C   + + A  L+  +++ S  P+  TY+ L+   C R+  +    L
Sbjct: 408 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 467

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
              M R    P+   + +L+S  C+N    ++   L EM+ K  AP
Sbjct: 468 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 513



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +DL+       K+F        QM + G L  + +  K +  L  + R   A+  + +M 
Sbjct: 169 YDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 228

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  +  +   +N+++   CK   ++RA  VF+ +      P   ++NTL+ G C   +L 
Sbjct: 229 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLK 287

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M+++G  P+V+T+ +L+  +C +        +  EM+     PNVVTY  L+
Sbjct: 288 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 347

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +  G+ G +      ++++  +G+  D   YN+LI  L + G+ + A  +V+++    + 
Sbjct: 348 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 407

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN +T++ LI+  C    +E A +L   M    C P+   +  L+   C+ +       +
Sbjct: 408 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 467

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +  M  K ++PD    + L S L   GK   +     +M  +G  PK
Sbjct: 468 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPK 514



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 86/190 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C  + + + +L        + R A DTF ++++ G  P     N  +  L  + R++ 
Sbjct: 334 RRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLED 393

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A    +EMR   I+PNV T N ++ A C     E A+++   ME     P + TY  L+ 
Sbjct: 394 AYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLK 453

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
             C +  + + +     M +  I P+  T+  L+   C+ GK+ ++     EM +   +P
Sbjct: 454 LCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 513

Query: 367 NVVTYNTLIN 376
              T++ ++ 
Sbjct: 514 KQETFDLVME 523



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 3/268 (1%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+     +Y+ ++          L     N M + G   +++T   ++       +  EA
Sbjct: 161 GYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEA 220

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
              F +M    V  +    N L++   +  + +    +++E LR  I  D  ++N L+ G
Sbjct: 221 IDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHG 279

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK    K+A   ++++ ++   P+  TY++L+   C+ K+ +  + L   M +  C PN
Sbjct: 280 WCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPN 339

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +LM    +      A +   ++ E  +APD+   + L   L   G+ E A  +  
Sbjct: 340 VVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE 399

Query: 533 KMEIRGLLPK--GFDKLRTINCAPENGE 558
           +M   G+ P    F+ L +  C     E
Sbjct: 400 EMRTTGIAPNVTTFNTLISAACDHSQAE 427



 Score = 40.4 bits (93), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 19/200 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY----SYRMCDSSPLV-- 195
           T++I++H L K  + + +       L  D     +  ++S++Y    + R+ D+  +V  
Sbjct: 342 TYTILMHALGKAGRTREALDTFDK-LKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 400

Query: 196 ------------FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                       F+ L        +  NA     +M +    P I++    L      + 
Sbjct: 401 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 460

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V I L     M R  ISP+  T  +++   C+ G + ++    + M S GF P   T++ 
Sbjct: 461 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDL 520

Query: 304 LISGHCNKGLLSLAMKFKNL 323
           ++     + L S+  K + L
Sbjct: 521 VMEKLEKRNLQSVYKKIQVL 540


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 171/347 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  ++L   + H  +   +     ++   G+ P   + N  +  L     V  +L F+ +
Sbjct: 101 VTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDK 160

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +       N  +   +++  CK+G    AV++ + +E     P V  Y+T+I G C   +
Sbjct: 161 VVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKI 220

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           ++ A  F + M   GI PNVIT++TLI+GFC  G+L  A  + +EM   N++PNV TYN 
Sbjct: 221 VNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNI 280

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + G  +    L  EM   G   D++TYN+++ GLCK     KA  L   + K  
Sbjct: 281 LIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + PN  TY+ALI G C     + A +L++ ++  GC  +   + +++S  C+   FD+A 
Sbjct: 341 IQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKAL 400

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +  +M +    P+++    +   L    +++ A KL   M  +GLL
Sbjct: 401 AMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 177/373 (47%), Gaps = 39/373 (10%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           PIIE   K L  L+  +    A+   ++M    I PN+ TLN++++ FC LG +  +  V
Sbjct: 64  PIIEF-GKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------- 330
              +  +G+ P   T NTL+ G C KG +  ++ F + +   G Q               
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 331 --------------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
                               P+V+ ++T+I G CK   +++A   FSEM A  + PNV+T
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           Y+TLI G+   G      SL  EM+   I  ++ TYN LI  LCKEGK K+A  L+ ++ 
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMH 302

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
                 +  TY++++ G C  +N ++A  L+  M + G +PNK+ +  L+   C+     
Sbjct: 303 HKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLK 362

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FD-KL 547
            A ++   +L K    D    + + SGL   G  + A+ +  KME  G +P    FD  +
Sbjct: 363 NAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIII 422

Query: 548 RTINCAPENGEKE 560
           R++    EN + E
Sbjct: 423 RSLFEKDENDKAE 435



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 138/301 (45%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD  +  +  +   R +P +     ++    K+     A+ + + ME  G  P++ T N 
Sbjct: 46  VDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNI 105

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI+  C+ G ++ +      + K G QP+ IT NTL+ G C KG++  +     ++ A  
Sbjct: 106 LINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG 165

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
              N V+Y TL+NG  ++G +     L   +     + D++ Y+ +I GLCK+    +A 
Sbjct: 166 FQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAY 225

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
               +++   + PN  TYS LI G C+      AF L   MI     PN + + +L+   
Sbjct: 226 DFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDAL 285

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C+      A ++L EM  K    D +  + +  GL      + A  LF KM+  G+ P  
Sbjct: 286 CKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNK 345

Query: 544 F 544
           +
Sbjct: 346 Y 346


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 152/287 (52%), Gaps = 2/287 (0%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+R  I P++ + N +++  CK   +E+AV++   ME     P+  TY  L+ G C +G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  AM+    M++ G++ +V+ ++TLI GFC KG L     +F EM    +SPNVV Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LING+ + G      ++   M   GI+ D+ TY  +I GLCK+G+ +KA  L   + +  
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             P+  TY+ LI G C       AF+++++M+  G R     +  L+   C N   D A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 494 EVLLEMLEKC--MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++   +LE    + PD I  + +  GL   G+ + A++++  M  RG
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERG 287



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 163/346 (47%), Gaps = 11/346 (3%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M+    LP I S N  ++ L   +R++ A+    EM  +   PN +T  ++M   CK G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A+ +   M+  G    V  Y+TLISG C+KG L       + M + GI PNV+ ++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI GFCKKG   EA  +   M    + P+V TY  +I G  + G +     L++ M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
            +   +TYN LI GLCKEG    A  + + + +        +Y+ LI G C     + A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 459 QLYKSMIRSG--CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           +L+ S++  G    P+   F  ++   C+    D+A E+   M+E+    +      L  
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPK---------GFDKLRTINCA 553
                G  + AM+L++++   GL+P          GF K+  +N A
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFA 346



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 173/409 (42%), Gaps = 37/409 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +   + +L        +   A     +M+  G    +   +  +S       +D   
Sbjct: 41  CEPNSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGK 100

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM    ISPNV   + +++ FCK G+   A  V   M   G  P V TY  +I G 
Sbjct: 101 ALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGL 160

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G    A+   +LM + G +P+ +T+N LI G CK+G + +A +IF  M        V
Sbjct: 161 CKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEV 220

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNG--IKVDILTYNALILGLCKEGKTKKAA--- 423
           V+YNTLI G    G  +    L+  +L +G  ++ D++T+N +I GLCKEG+  KA    
Sbjct: 221 VSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIY 280

Query: 424 --------------------------------YLVKDLDKNSLVPNASTYSALITGQCVR 451
                                            L K + K  LVP+++TYS +I G C  
Sbjct: 281 DTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM 340

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  L+  M  SG  P    +  LM++ C+    ++A  +  EM E    PD+I  
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           + +  G    G    A +L   M+  GL P  +     IN   + G+ E
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 177/383 (46%), Gaps = 4/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G       D    LFD +L   +    + +V+  L   +  +  +R AT     M 
Sbjct: 85  TLISGFCSKGCLDRGKALFDEMLE--KGISPNVVVYSCLINGFCKKGLWREATAVLHTMT 142

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P + +    +  L    R   AL  +  M      P+  T N++++  CK G I 
Sbjct: 143 ERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIG 202

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEK-NGIQPNVITFNT 338
            A ++F+ M   G    V +YNTLI G CN G L  AMK F +L+E  N ++P+VITFNT
Sbjct: 203 DAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNT 262

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I G CK+G+L +A  I+  M       N+ T + LI  Y + G  +    L++ + + G
Sbjct: 263 VIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLG 322

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +     TY+ +I G CK      A  L   +  + L P    Y+ L+   C   + E+A 
Sbjct: 323 LVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQAR 382

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L++ M  S C P+   F +++    +  D   A E+L +M +  + PD+   S   + L
Sbjct: 383 RLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRL 442

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ E A   F  M   G+ P
Sbjct: 443 SKLGQMEEAKGAFDSMIASGITP 465



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 162/326 (49%), Gaps = 4/326 (1%)

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
           LFD  L + +  + S + +++L           +A   F  M + G    + S N  +  
Sbjct: 172 LFD--LMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229

Query: 238 LLDSERVDIALGFYKEMRR--NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           L ++ ++D A+  +  +    N + P+V T N V+   CK G +++AVE++  M   G  
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
            ++ T + LI  +   G++  AM+    + K G+ P+  T++ +I GFCK   L+ A  +
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           FS MK + +SP +  YNTL+    +  + E    L++EM  +  + D +++N +I G  K
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G    A  L+ D+ +  L P+A TYS+ I         E A   + SMI SG  P+ H+
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLE 501
           ++ L+  F  N++ +    +L +M +
Sbjct: 470 YDSLIKGFGLNDEIEEVINLLRQMAD 495



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 138/271 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  +  L    R+D A+  Y  M       N++T ++++  + K GII++A+E+
Sbjct: 255 PDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMEL 314

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           +K +  +G +PS TTY+ +I G C   +L+ A    + M+ +G+ P +  +NTL+   CK
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +  L +A R+F EMK +N  P+ +++N +I+G  + G+      L  +M + G+  D  T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y++ I  L K G+ ++A      +  + + P+   Y +LI G  +    E    L + M 
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
             G   +  I   +++  C + +     E+L
Sbjct: 495 DMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 151/303 (49%), Gaps = 2/303 (0%)

Query: 149 ILTKNRKFK--SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           +L K ++ +  S  +++ G+ ++   D   KLF S+L      +   + F+ + +     
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKE 270

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            +   A + +  M + G    + +C+  +   + S  +D A+  +K + +  + P+  T 
Sbjct: 271 GRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTY 330

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           ++++  FCK+ ++  A  +F  M+  G  P++  YNTL++  C +  L  A +    M++
Sbjct: 331 SVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKE 390

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +  +P+ I+FN +I G  K G +H A  + ++M+   ++P+  TY++ IN   ++G  E 
Sbjct: 391 SNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEE 450

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
               ++ M+ +GI  D   Y++LI G     + ++   L++ +    ++ +    ++++T
Sbjct: 451 AKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILT 510

Query: 447 GQC 449
             C
Sbjct: 511 FLC 513


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 185/380 (48%), Gaps = 3/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G  +  + +  S++ + IL S+   D     ++ +   +    +   AT    +M+ 
Sbjct: 119 LIKGFFNFKNIEKASRVME-ILESHTEPDV--FAYNAVISGFCKVNQIEAATQVLNRMKA 175

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GFLP I + N  + SL +  ++ +AL    ++  +   P V T  +++ A    G I  
Sbjct: 176 RGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINE 235

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++ + M + G +P + TYN +I G C +G++  A +    +   G +P+VI++N L+ 
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLR 295

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F  +GK  E  ++ +EM +    PN VTY+ LI+   + G  +   S+ + M+   +  
Sbjct: 296 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 355

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  +Y+ LI  LCKEG+   A  ++  +  N  +P+   Y+ ++   C   N+ +A +++
Sbjct: 356 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 415

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             +   GC PN   +  ++S      D  RA  ++  M+ K + PD I  + L S L   
Sbjct: 416 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRD 475

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  E A+ L   ME  G  P
Sbjct: 476 GLVEEAIGLLDDMEQSGFRP 495



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 142/285 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ + +          A +    +   G  P + S N  L + L+  + D       EM 
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T ++++ + C+ G I+ A+ V K M      P   +Y+ LIS  C +G L 
Sbjct: 315 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 374

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+   + M  NG  P+++ +NT++   CK G  ++A  IF++++     PNV +YNT+I
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G+      +   M+  GI  D +TYN+LI  LC++G  ++A  L+ D++++   
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           P   +Y+ ++ G C  +  + A  ++  MI  GCRPN+  + +L+
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 539



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 167/375 (44%), Gaps = 36/375 (9%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P +  C K +    + + ++ A     E+  +   P+V+  N V+  FCK+  IE A
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESHTEPDVFAYNAVISGFCKVNQIEAA 166

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA------------------------- 317
            +V   M++ GF+P + TYN +I   CN+  L LA                         
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEA 226

Query: 318 ----------MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                     MK    M   G+ P++ T+N +I G CK+G +  A  + + + +    P+
Sbjct: 227 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPD 286

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V++YN L+  +   G  + G  L  EM   G + + +TY+ LI  LC+ G+  +A  ++K
Sbjct: 287 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLK 346

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +  L P+  +Y  LI+  C     + A  +   MI +GC P+   +  +++  C+N 
Sbjct: 347 VMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 406

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           + ++A E+  ++      P+    + + S L  CG    A+ +   M  +G+ P      
Sbjct: 407 NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYN 466

Query: 548 RTINCAPENGEKESG 562
             I+C   +G  E  
Sbjct: 467 SLISCLCRDGLVEEA 481



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 167/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++  +  +R+K   A     Q+     +P + +    + + +    ++ A+   +E
Sbjct: 183 VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 242

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P++YT N ++   CK G++ERA E+  ++ S G  P V +YN L+    N+G 
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                K    M   G +PN +T++ LI   C+ G++ EA  +   M    ++P+  +Y+ 
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + G  ++   + + M+ NG   DI+ YN ++  LCK G   +A  +   L    
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN S+Y+ +I+      +  RA  +  +MI  G  P++  +  L+S  C++   + A 
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L +M +    P  I  + +  GL    + + A+ +F +M  +G  P
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRP 530



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 140/337 (41%), Gaps = 56/337 (16%)

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVT---------------------------------- 299
           CK G    ++   + + + G+ P V                                   
Sbjct: 89  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 148

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +ISG C    +  A +  N M+  G  P+++T+N +I   C + KL  A  +  ++
Sbjct: 149 AYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL 208

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
              N  P V+TY  LI      G       L EEML  G+  D+ TYNA+I G+CKEG  
Sbjct: 209 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 268

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           ++AA L+  L      P+  +Y+ L+     +   +   +L   M   GC PNK  + +L
Sbjct: 269 ERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 328

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +S+ C+    D A  VL  M+EK + PD+     L S L   G+ +LA+ +   M   G 
Sbjct: 329 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 388

Query: 540 LP----------------------KGFDKLRTINCAP 554
           LP                      + F+KLR + C P
Sbjct: 389 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 425



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 150/304 (49%), Gaps = 2/304 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+RG+      +  ++L  S+  + + C+   + +++L + + ++ K+        +M 
Sbjct: 257 AIIRGMCKEGMVERAAELITSL--TSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + +  +SSL    R+D A+   K M    ++P+ Y+ + ++ A CK G ++
Sbjct: 315 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 374

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +   M S G +P +  YNT+++  C  G  + A++  N +   G  PNV ++NT+I
Sbjct: 375 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 434

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                 G    A  +   M +  + P+ +TYN+LI+   + G  E    L ++M ++G +
Sbjct: 435 SALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 494

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             +++YN ++LGLCK  +   A  +  ++ +    PN +TY  LI G         A +L
Sbjct: 495 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554

Query: 461 YKSM 464
             S+
Sbjct: 555 ANSL 558


>gi|125592120|gb|EAZ32470.1| hypothetical protein OsJ_16686 [Oryza sativa Japonica Group]
          Length = 879

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 197/430 (45%), Gaps = 27/430 (6%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY------- 186
           K SSL    +S ++H   ++   + +E ++R  ++ D  D P  ++ S+++ Y       
Sbjct: 341 KLSSLNGIIYSNIIHAHCQSGNMERAEELVRE-MEEDGIDAPIDVYHSMMHGYTIIQNEN 399

Query: 187 ---------RMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
                    + C   P +  +  L   Y    K   A     +M   G    I+  NK  
Sbjct: 400 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG----IKHNNKTY 455

Query: 236 SSLLDS----ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           S L++          A   ++EM R+ + P+    N+++ AFCK+G ++RA+ + + M+ 
Sbjct: 456 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 515

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               PS   +  +I G+   G +  A+   +LM ++G  P V+T+N LI G  +K K+  
Sbjct: 516 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 575

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +  +M    ++PN  TY  ++ GY   G+       + ++  +G+K+D+  Y  L+ 
Sbjct: 576 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 635

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             CK G+ + A  + +++    +  N   Y+ LI G   R +   A  L K M   G  P
Sbjct: 636 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 695

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N H +   ++  C+  D  RA +V+ EM++  + P+    + L  G       + A+K F
Sbjct: 696 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 755

Query: 532 RKMEIRGLLP 541
            +M++ GL P
Sbjct: 756 EEMKLAGLKP 765



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 164/358 (45%), Gaps = 10/358 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + +  VF  L   YA  +  R A     +M+  G    I + +  +S          
Sbjct: 271 RGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQS 330

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KE +    S N    + ++HA C+ G +ERA E+ + ME  G    +  Y++++ 
Sbjct: 331 ADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 390

Query: 307 GHC-----NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           G+      NK L+     F+ L E  G +P++I++  L+  + K GK+ +A  I  EM++
Sbjct: 391 GYTIIQNENKCLVV----FERLKE-CGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES 445

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             +  N  TY+ LING+  + +     +++EEMLR+G++ D   YN LI   CK G   +
Sbjct: 446 CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDR 505

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  +++ + K  + P+   +  +I G  V  + + A      M RSGC P    +  L+ 
Sbjct: 506 AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 565

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              +     RA  VL +M    + P+    + +  G    G    A + F K++  GL
Sbjct: 566 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 623



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 159/339 (46%), Gaps = 26/339 (7%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+   ++ G +    F     +F+ +L S    D +  +++LL + +    K  N     
Sbjct: 453 KTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRA--IYNLLIEAFC---KMGNMDRAI 507

Query: 217 C----------QMRDYGFLPIIE--SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           C          Q  +  F PIIE  +    + S LD+  +D+       MRR+   P V 
Sbjct: 508 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT--LDL-------MRRSGCVPTVM 558

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N ++H   +   ++RAV V   M   G  P+  TY  ++ G+   G +  A ++   +
Sbjct: 559 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 618

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +++G++ +V  + TL+   CK G++  A  +  EM    +  N   YN LI+G+ + G+ 
Sbjct: 619 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 678

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                L ++M  +G+  +I TY + I   CK G  ++A  +++++    L PN  TY+ L
Sbjct: 679 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 738

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           I G       +RA + ++ M  +G +P++  +  L+++ 
Sbjct: 739 IKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSL 777



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 143/312 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   + H   F NA   F +M   G  P     N  + +      +D A+   ++M+
Sbjct: 455 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 514

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R+ P+      ++  +   G ++ A++    M   G +P+V TYN LI G   K  + 
Sbjct: 515 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 574

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + M   GI PN  T+  ++ G+   G + +A   F+++K + +  +V  Y TL+
Sbjct: 575 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 634

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               + G  +   ++  EM    I  +   YN LI G  + G   +A  L+K + ++ + 
Sbjct: 635 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 694

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY++ I   C   + +RA ++ + M+  G +PN   +  L+  + +    DRA + 
Sbjct: 695 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 754

Query: 496 LLEMLEKCMAPD 507
             EM    + PD
Sbjct: 755 FEEMKLAGLKPD 766



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 6/298 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ MR   I PN +    ++HA+     +  A+   + M+S G   ++ TY+ LIS
Sbjct: 261 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 320

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQ---PNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           G      ++ +    NL ++   +    N I ++ +I   C+ G +  A  +  EM+   
Sbjct: 321 GFAK---INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDG 377

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +   +  Y+++++GY  + N      ++E +   G K  I++Y  L+    K GK  KA 
Sbjct: 378 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 437

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + K+++   +  N  TYS LI G     +   AF +++ M+RSG +P++ I+ +L+  F
Sbjct: 438 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 497

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  + DRA  +L +M ++ M P +     +  G    G  + A+     M   G +P
Sbjct: 498 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVP 555



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 12/216 (5%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   F  +I  + K+G  H A   F  M+A  + PN   + +L++ Y    +     S
Sbjct: 239 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 298

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
             EEM   G+++ I+TY+ LI G  K   ++ A  L K+        N   YS +I   C
Sbjct: 299 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 358

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS--TFCQNEDFDRAAEVLLEMLEKCMAPD 507
              N ERA +L + M   G      ++  +M   T  QNE+      V+ E L++C    
Sbjct: 359 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNEN---KCLVVFERLKECGFKP 415

Query: 508 SII----LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           SII    L  LY  +   GK   A+ + ++ME  G+
Sbjct: 416 SIISYGCLLNLYVKI---GKVAKALSISKEMESCGI 448



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 114/281 (40%), Gaps = 35/281 (12%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           PS   +  +I  +  +G    A      M   GI+PN   F +L+  +     +  A   
Sbjct: 240 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 299

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EMK+  +   +VTY+ LI+G+ ++ +S+   +L++E       ++ + Y+ +I   C+
Sbjct: 300 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 359

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS--------------------- 454
            G  ++A  LV++++++ +      Y +++ G  + +N                      
Sbjct: 360 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 419

Query: 455 --------------ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
                          +A  + K M   G + N   + ML++ F    DF  A  +  EML
Sbjct: 420 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 479

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + PD  I + L       G  + A+ +  KM+   + P
Sbjct: 480 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 520


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 179/367 (48%), Gaps = 9/367 (2%)

Query: 175 PSKLFDSILYSYRMCDSSPL------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           P  L D++   +R  D+ P           L       +++      + +M     LP  
Sbjct: 18  PHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRF 77

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            S +    S +++     A      M +     NVY LN+V+  FC+ G  ++A+ +F  
Sbjct: 78  TSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQ 137

Query: 289 MESM--GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG-IQPNVITFNTLIFGFCK 345
           M+      +P   TYNTL++G C    L+ A      M+K G  +PN++T++ LI  +CK
Sbjct: 138 MKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCK 197

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G++ E   +  EM+   +  +V  Y++LI+ +   G+ E G  L++EMLR  +  +++T
Sbjct: 198 SGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVT 257

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ L+ GL + G+ ++A+ ++KD+    + P+   Y+ L  G C    +  A ++   M+
Sbjct: 258 YSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMV 317

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G  P    + ++++  C+ +  D A  V+  M++K   PD++  + L  GL   GK  
Sbjct: 318 QKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIH 377

Query: 526 LAMKLFR 532
            AM L++
Sbjct: 378 EAMDLWK 384



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 160/350 (45%), Gaps = 6/350 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + +L   Y    +         +M   G    +   +  +S+      ++   
Sbjct: 181 CRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGR 240

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + EM R ++SPNV T + +M    + G    A E+ K+M + G  P V  Y  L  G 
Sbjct: 241 ELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGL 300

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G    A+K  +LM + G +P  +T+N ++ G CK+ ++ +A  +   M      P+ 
Sbjct: 301 CKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDA 360

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNG--IKVDILTYNALILGLCKEGKTKKAAYLV 426
           VTYNTL+ G    G       L++ +L     +K D+ T N LI GLCKEG+   AA + 
Sbjct: 361 VTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIH 420

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             + +  L  N  TY+ LI G    +    A +L+K  + SG  PN   + ++++  C+ 
Sbjct: 421 SSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKM 480

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKM 534
           +    A  +  +M +  + P  I  + L + L  C +D L  A  LF++M
Sbjct: 481 QMLSVARGLFCKMKDSGIRPTVIDYNALMTSL--CREDSLEQARSLFQEM 528



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 156/326 (47%), Gaps = 5/326 (1%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR--ISPNVYTLNMVMHAFCKL 276
           M   GF   + + N  L     S + D A+  + +M+RN   + P+  T N +++ FCK 
Sbjct: 103 MTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKA 162

Query: 277 GIIERAVEVFKNMESMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
             +  A  +F+ M+  G   P++ TY+ LI  +C  G +   +     ME+ G++ +V  
Sbjct: 163 KRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV 222

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           +++LI  FC +G +     +F EM    VSPNVVTY+ L+ G G+ G     + + ++M 
Sbjct: 223 YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT 282

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
             G++ D++ Y  L  GLCK G+   A  ++  + +    P   TY+ ++ G C     +
Sbjct: 283 ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK--CMAPDSIILSE 513
            AF + + M++ G +P+   +  L+   C       A ++   +L +   + PD    + 
Sbjct: 343 DAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNN 402

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGL 539
           L  GL   G+   A ++   M   GL
Sbjct: 403 LIQGLCKEGRVHDAARIHSSMVEMGL 428



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 171/383 (44%), Gaps = 4/383 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++         +   +LFD +L   R    + + +  L +      ++R A++    M 
Sbjct: 225 SLISAFCGEGDIETGRELFDEMLR--RKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMT 282

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +       L  + R   A+     M +    P   T N+V++  CK   ++
Sbjct: 283 ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM--EKNGIQPNVITFNT 338
            A  V + M   G  P   TYNTL+ G C  G +  AM    L+  EK  ++P+V T N 
Sbjct: 343 DAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNN 402

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           LI G CK+G++H+A RI S M    +  N+VTYN LI GY           L++  + +G
Sbjct: 403 LIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESG 462

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
              + +TY+ +I GLCK      A  L   +  + + P    Y+AL+T  C   + E+A 
Sbjct: 463 FSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQAR 522

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L++ M       +   F +++    +  D   A E+L EM    + PD++  S L +  
Sbjct: 523 SLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G  + AM L+ KM   G +P
Sbjct: 583 SKLGMLDEAMGLYEKMVSCGHVP 605



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 113/425 (26%), Positives = 187/425 (44%), Gaps = 13/425 (3%)

Query: 128 TWVQTHKPSSLTLETHSIVLHILTKNRKFKSS----ESILRGILDSDSFDLPSKLFDSIL 183
           ++V TH PS         VL ++TK R F  +      +L+G   S   D    LF  + 
Sbjct: 86  SFVNTHHPS-----FAFSVLSLMTK-RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMK 139

Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL-PIIESCNKFLSSLLDSE 242
            +Y       + ++ L   +   K+   A   F  M+  G   P + + +  +     S 
Sbjct: 140 RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSG 199

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            V   LG  +EM R  +  +V+  + ++ AFC  G IE   E+F  M      P+V TY+
Sbjct: 200 EVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYS 259

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            L+ G    G    A +    M   G++P+V+ +  L  G CK G+  +A ++   M   
Sbjct: 260 CLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
              P  +TYN ++NG  +    +    + E M++ G K D +TYN L+ GLC  GK  +A
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEA 379

Query: 423 AYLVKDL--DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
             L K L  +K  + P+  T + LI G C       A +++ SM+  G + N   +  L+
Sbjct: 380 MDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLI 439

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
             +        A ++    +E   +P+S+  S + +GL       +A  LF KM+  G+ 
Sbjct: 440 EGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIR 499

Query: 541 PKGFD 545
           P   D
Sbjct: 500 PTVID 504



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 165/351 (47%), Gaps = 11/351 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L ++++        +  +A      M   G  P   + N  L  L  + ++  A+  +K 
Sbjct: 326 LTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKL 385

Query: 254 MRRNR--ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           +   +  + P+V+T N ++   CK G +  A  +  +M  MG   ++ TYN LI G+   
Sbjct: 386 LLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAA 445

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
             L  A+K      ++G  PN +T++ +I G CK   L  A  +F +MK + + P V+ Y
Sbjct: 446 RKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDY 505

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N L+    +  + E   SL++EM      VD++++N +I G  K G  K A  L+ ++  
Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFM 565

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
             LVP+A T+S LI         + A  LY+ M+  G  P   +F+ L+  +    + ++
Sbjct: 566 MDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
              +L +M +K +  DS + S + + L H         + R +++  +LPK
Sbjct: 626 IISLLHQMADKDVVLDSKLTSTILACLCH---------MSRNLDVEKILPK 667



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 3/265 (1%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           +  V V+  M S   +P  T+ + L     N    S A    +LM K G   NV   N +
Sbjct: 59  DAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLV 118

Query: 340 IFGFCKKGKLHEANRIFSEMKATN--VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           + GFC+ G+  +A  +FS+MK     V P+ VTYNTL+NG+ +         L+E M + 
Sbjct: 119 LKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKG 178

Query: 398 G-IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           G  + +++TY+ LI   CK G+  +   L++++++  L  +   YS+LI+  C   + E 
Sbjct: 179 GDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIET 238

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
             +L+  M+R    PN   +  LM    +   +  A+E+L +M  + + PD +  + L  
Sbjct: 239 GRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLAD 298

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
           GL   G+   A+K+   M  +G  P
Sbjct: 299 GLCKNGRAGDAIKVLDLMVQKGEEP 323



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 9/249 (3%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ L + Y   +K   A   +    + GF P   + +  ++ L   + + +A G + +
Sbjct: 433 VTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCK 492

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M+ + I P V   N +M + C+   +E+A  +F+ M ++     V ++N +I G    G 
Sbjct: 493 MKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGD 552

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M    + P+ +TF+ LI  F K G L EA  ++ +M +    P VV +++
Sbjct: 553 VKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDS 612

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L+ GYG  G +E   SL  +M    + +D    + ++  LC         ++ ++LD   
Sbjct: 613 LLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLC---------HMSRNLDVEK 663

Query: 434 LVPNASTYS 442
           ++P  S  S
Sbjct: 664 ILPKFSQQS 672


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 167/326 (51%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A D FC M     LP I   +K LS++  S+  D+ +  +  M    I  ++YT N+V++
Sbjct: 53  AIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVIN 112

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             C+      A+ V   M   G+ P V T ++LI+G C    +  A+   + ME+   + 
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL 172

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +V+ +NT+I GFCK G ++ A  +F  M+   V  + VTYN+L+ G    G     A L 
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLM 232

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M+   I  +++T+ ALI    +EGK  +A    +++ +  + P+  TY+++I G C+ 
Sbjct: 233 RDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMH 292

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              + A Q+   M+  GC P+   +  L++ FC+ +  D   +++ EM ++ +  D++  
Sbjct: 293 GQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTF 352

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIR 537
           + +  G    G+ + A ++F +M  R
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMGSR 378



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 50/420 (11%)

Query: 162 ILRGILDSDSFDLPSKLFDSI--------LYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
           +L  I  S ++DL   LF ++        LY+Y          +++        +F  A 
Sbjct: 75  LLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY----------NIVINCLCRCSRFVIAL 124

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
               +M  +G+ P + + +  ++      RV  A+    +M   R   +V   N ++  F
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGF 184

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           CK G++  A+ +F  ME  G      TYN+L++G C  G  S A +    M    I PNV
Sbjct: 185 CKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNV 244

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           ITF  LI  F ++GK  EA + + EM    + P+V TYN++I+G    G  +    + + 
Sbjct: 245 ITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDL 304

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV------------------ 435
           M+  G   D++TYN LI G CK  +  +   LV+++ +  LV                  
Sbjct: 305 MVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGR 364

Query: 436 --------------PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
                         PN  TYS L+ G C     E+A  L++SM +S    +   + +++ 
Sbjct: 365 PDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIH 424

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C   + + A ++   +  K + PD +  + + SG       + A  L+RKM+  GLLP
Sbjct: 425 GMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 167/352 (47%), Gaps = 7/352 (1%)

Query: 188 MCDSSPL----VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           M  S PL     F  L    A  K +      F  M   G    + + N  ++ L    R
Sbjct: 60  MIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSR 119

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
             IAL    +M +    P+V T++ +++ FC+   +  AV++   ME M     V  YNT
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNT 179

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           +I G C  GL++ A+     ME++G++ + +T+N+L+ G C  G+  +A R+  +M   +
Sbjct: 180 IIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD 239

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + PNV+T+  LIN + + G        YEEM+R  I  D+ TYN++I GLC  G+  +A 
Sbjct: 240 IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAK 299

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            ++  +      P+  TY+ LI G C  K  +   +L + M + G   +   F  ++  +
Sbjct: 300 QILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGY 359

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
            Q    D A E+   M  +   P+    S L  GL +  + E A+ LF  M+
Sbjct: 360 FQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQ 408



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 185/384 (48%), Gaps = 20/384 (5%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILD-------------SDSFDLPSKLFDSILYSY 186
           L T++IV++ L +  +F  + S++  ++               + F   +++F ++    
Sbjct: 104 LYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVS 163

Query: 187 RM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           +M    C    ++++ +   +       NA   F +M   G      + N  ++ L  S 
Sbjct: 164 KMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSG 223

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R   A    ++M    I PNV T   +++AF + G    A + ++ M      P V TYN
Sbjct: 224 RRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYN 283

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           ++I G C  G +  A +  +LM   G  P+V+T+NTLI GFCK  ++ E  ++  EM   
Sbjct: 284 SMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            +  + VT+NT+I GY Q G  +    ++  M   G + +I TY+ L+ GLC   + +KA
Sbjct: 344 GLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKA 400

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L + + K+ +  + +TY+ +I G C+  N E A+ L+ S+   G  P+   +  ++S 
Sbjct: 401 LVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISG 460

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAP 506
           FC+   +D+A  +  +M E  + P
Sbjct: 461 FCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 152/300 (50%)

Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
           S  +D A+  +  M ++R  P++   + ++    K    +  + +F NME  G    + T
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYT 106

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           YN +I+  C      +A+     M K G +P+V+T ++LI GFC+  ++  A  + S+M+
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME 166

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
                 +VV YNT+I+G+ + G       L+  M R+G++ D +TYN+L+ GLC  G+  
Sbjct: 167 EMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRS 226

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            AA L++D+    +VPN  T++ALI           A + Y+ MIR    P+   +  ++
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMI 286

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
              C +   D A ++L  M+ K   PD +  + L +G     + +   KL R+M  RGL+
Sbjct: 287 HGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLV 346



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 2/264 (0%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A+++F NM     +PS+  ++ L+S         L +   + ME  GI  ++ T+N 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA-SLYEEMLRN 397
           +I   C+  +   A  +  +M      P+VVT ++LING+ Q GN   GA  L  +M   
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQ-GNRVFGAVDLVSKMEEM 168

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
             K+D++ YN +I G CK G    A  L   ++++ +  +  TY++L+TG C       A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
            +L + M+     PN   F  L++ F +   F  A +   EM+ +C+ PD    + +  G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
           L   G+ + A ++   M  +G  P
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFP 312


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 191/397 (48%), Gaps = 25/397 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+ +++ L K R   ++E +LR ++D+     P+K                + +  +  
Sbjct: 153 THNSIINALCKARAVDNAELLLRQMVDNGV--PPNK----------------VTYTSMIH 194

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y+   ++  AT  F +M   G +P I S N F+ SL    R   A   +  M      P
Sbjct: 195 GYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRP 254

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N+ T  +++H +   G     +  F  M+  G + +   +  LI  +  +G++  AM   
Sbjct: 255 NIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLIL 314

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
           + M+  G+ P+V T++TLI   C+ G+L +A   F++M  T V PN V Y++LI G+   
Sbjct: 315 SEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTH 374

Query: 382 GNSEMGASLYEEMLRNGI-KVDILTYNALILGLCKEGKTKKAAY---LVKDLDKNSLVPN 437
           G+      L  EM+ NGI + +I  +N+++  +CKEG+   A +   LVKD+ + S   +
Sbjct: 375 GDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERS---D 431

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
              ++ LI G C+     +AF +  +MI +G  P+   +  L++ + ++   D    +  
Sbjct: 432 IIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFR 491

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
           EM +K + P ++  + +  GL   G+   A K+  +M
Sbjct: 492 EMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEM 528



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 36/390 (9%)

Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
           +C    + ++ +   +    K   A + + +M   GF+P + + N  +++L  +  VD A
Sbjct: 111 VCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNA 170

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
               ++M  N + PN  T   ++H +  LG  E A ++F+ M   G IP + ++N+ +  
Sbjct: 171 ELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDS 230

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G    A +    M   G +PN++T+  L+ G+  +G   +    F+ MK   +  N
Sbjct: 231 LCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVAN 290

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            + +  LI+ Y + G  +    +  EM   G+  D+ TY+ LI  LC+ G+   A     
Sbjct: 291 CLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFN 350

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC-RPN-------------- 472
            +    + PN   Y +LI G C   +  +A +L   M+ +G  RPN              
Sbjct: 351 QMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKE 410

Query: 473 ------KHIFEM---------------LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                  HIF++               L+  +C   +  +A  VL  M+   + PD+   
Sbjct: 411 GRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTY 470

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + L +G    G+ +  + LFR+M  + + P
Sbjct: 471 NTLVNGYFKSGRIDDGLNLFREMSDKKIKP 500



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 172/371 (46%), Gaps = 1/371 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           LVF +L   YA R     A     +M+  G  P + + +  +S+L    R+  A+  + +
Sbjct: 292 LVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQ 351

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKG 312
           M    + PN    + ++  FC  G + +A E+   M + G   P++  +N+++   C +G
Sbjct: 352 MIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEG 411

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A    +L++  G + ++I FNTLI G+C  G++ +A  +   M +  + P+  TYN
Sbjct: 412 RVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYN 471

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL+NGY + G  + G +L+ EM    IK   +TYN ++ GL + G+T  A  ++ ++   
Sbjct: 472 TLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGC 531

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
               +  TY+ ++ G C    ++ A  +++ +     + N      ++++    +  + A
Sbjct: 532 GTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEA 591

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
            ++   + +  + P++     +   L   G  E A  +F  ME  G  P       TI  
Sbjct: 592 KDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRT 651

Query: 553 APENGEKESGG 563
             E GE    G
Sbjct: 652 LLEKGEIVKAG 662



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 147/325 (45%), Gaps = 3/325 (0%)

Query: 192 SPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           SP VF    L        +  +A D F QM   G  P     +  +        +  A  
Sbjct: 323 SPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKE 382

Query: 250 FYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              EM  N I  PN+   N ++H+ CK G +  A  +F  ++ +G    +  +NTLI G+
Sbjct: 383 LVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGY 442

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A    + M   GI P+  T+NTL+ G+ K G++ +   +F EM    + P  
Sbjct: 443 CLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTT 502

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN +++G  + G +     +  EM+  G  V + TYN ++ GLC+   T +A  + + 
Sbjct: 503 VTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQK 562

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L   ++  N +T + +I      +  E A  L+ ++  SG  PN   + +++    +   
Sbjct: 563 LCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGS 622

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSE 513
            + A  +   M +   AP S +L++
Sbjct: 623 VEEADNMFSSMEKSGCAPCSRLLND 647



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 146/354 (41%), Gaps = 73/354 (20%)

Query: 261 PNVYTLNMVMHAFCK-----LGI------------------------------IERAVEV 285
           P ++T  +VM+  C+     LG+                               + AV+V
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 286 -FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK-NGI-QPNVITFNTLIFG 342
             + M  +G +P   +Y  ++   C+      A+    +M K  G+  P+V+T+NT+I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN-------------------------- 376
           F K+GK+ +A  ++ EM      P+VVT+N++IN                          
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 377 ---------GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
                    GY  +G  E    ++ EM   G+  DI+++N+ +  LCK G++K+AA +  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +      PN  TY  L+ G             + +M   G   N  +F +L+  + +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRG 305

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             D A  +L EM  + ++PD    S L S L   G+   A+  F +M   G+ P
Sbjct: 306 MMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQP 359



 Score = 75.5 bits (184), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 2/245 (0%)

Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S  ++F+ L   Y    +   A      M   G  P   + N  ++    S R+D  L  
Sbjct: 430 SDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNL 489

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
           ++EM   +I P   T N+++    + G    A ++   M   G   S+ TYN ++ G C 
Sbjct: 490 FREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCR 549

Query: 311 KGLLSLAM-KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
                 A+  F+ L   N ++ N+ T NT+I       +  EA  +FS +  + + PN  
Sbjct: 550 NNCTDEAIVMFQKLCTMN-VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAS 608

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TY  +I    + G+ E   +++  M ++G        N  I  L ++G+  KA   +  +
Sbjct: 609 TYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKAGNYMSKV 668

Query: 430 DKNSL 434
           D  S+
Sbjct: 669 DGKSI 673


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 167/354 (47%), Gaps = 3/354 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++ + +  +        +  +A     QMRD G LP   + N  +      +R+  A+
Sbjct: 574 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 633

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G  +EM      P+V T   + H  C+ G  + AVE+   M + G  P+  TY++++ G 
Sbjct: 634 GLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGL 693

Query: 309 CNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C  G ++ A+  F+ +     + P+VI ++ LI G CK G++ EA      M      P+
Sbjct: 694 CKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPD 753

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVT++ LING    G  + G  L+  M   G K DI  YNA+I   C +G+   A  L++
Sbjct: 754 VVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLE 813

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++  + +  N  T+  +I   C     + A   + S I   CR ++  +  L+++   + 
Sbjct: 814 EMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHS-IPEDCR-DEISYNTLITSLVASR 871

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++A E+L  M+    +PD+     +  GL   G  E+A KL ++M  RG  P
Sbjct: 872 RSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 192/397 (48%), Gaps = 25/397 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  +   D   +LFD +  S   C +  + +++L K     ++   A      MR
Sbjct: 315 SLMNGLCQARRVDEAFELFDVMKES--GCSADVITYNILLKGLCKLRRIPEAYRHVELMR 372

Query: 221 -DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR-NRISPNVYTLNMVMHAFCKLGI 278
              G  P + + +  +  L ++ RV+ A   Y+ M     ISPN +T   ++   CK G 
Sbjct: 373 RTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGD 432

Query: 279 IERAVEVFKNM---------------ESMGFI------PSVTTYNTLISGHCNKGLLSLA 317
             R  + F+ M                 + F+      P++ TYNTL++G    G++  A
Sbjct: 433 SRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDA 492

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
           +     M ++G+ P+VITFN+++ G CK+ ++ +A+ +F         PNVVTY+TLI+G
Sbjct: 493 LGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDG 552

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             ++   +    L  +M+  G + + +TY+ ++ GL K G+ + A  +++ +     +P+
Sbjct: 553 LSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPD 612

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           A TY+ LI G   R+    A  L + M+ +G  P+   +  L    C++  FD A E+L 
Sbjct: 613 AVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD 672

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            M  +  AP++I  S +  GL   G+   A+  F KM
Sbjct: 673 YMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 150/314 (47%), Gaps = 1/314 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  ++ L  S  V  ALG  + M  + +SP+V T N V+   CK   I  A  V
Sbjct: 471 PTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNV 530

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
           FK     G  P+V TY+TLI G      +  A++    M + G + N +T++T++ G  K
Sbjct: 531 FKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLK 590

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G++ +A  +  +M+     P+ VTYNTLI+G+ +         L  EML  G    ++T
Sbjct: 591 VGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVT 650

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  L  GLC+ G+  +A  ++  +      PNA TYS+++ G C       A   ++ M 
Sbjct: 651 YTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 466 RSG-CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           R     P+   +  L+   C+    D A E L  M+     PD +  S L +GL   G+ 
Sbjct: 711 RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770

Query: 525 ELAMKLFRKMEIRG 538
           +  ++LF  M  RG
Sbjct: 771 DTGLELFCGMAERG 784



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 179/387 (46%), Gaps = 12/387 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+   +  D   KL + +  + R C  + + ++ L      + + + A     +M 
Sbjct: 41  TVIDGLCRDNEVDKGCKLLEEM--AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA 98

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P + +    +  L     ++ A     EM      P+V    +++HA C+LG ++
Sbjct: 99  ANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVD 158

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A   F+ +  +GF P   TYNT++ G    G L  A     L+ ++   P V TF   +
Sbjct: 159 EAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAV 218

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K G L  A   F  M  T VSPN VTY+ LI+G  + G  ++   L  +  +N  +
Sbjct: 219 DGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD--KNS-Q 275

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             +  +++L+ GLC+  + ++A  L+K +     VPN   +++L+ G C  +  + AF+L
Sbjct: 276 AGMFAFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFEL 332

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE--VLLEMLEKCMAPDSIILSELYSGL 518
           +  M  SGC  +   + +L+   C+      A     L+   E C +P+ +  S L  GL
Sbjct: 333 FDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGC-SPNVVTFSTLIQGL 391

Query: 519 HHCGKDELAMKLFRKM-EIRGLLPKGF 544
            + G+   A +++ +M  + G+ P  F
Sbjct: 392 CNAGRVNQAWEVYERMVAVEGISPNRF 418



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 184/404 (45%), Gaps = 8/404 (1%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILD-----SDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           T++ +L  L K    +  E     +L+     S S+ + S   D ++   ++C  + + +
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMV--QVCRPTLVTY 476

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           + L    +     R+A      M + G  P + + N  L  L   +R+  A   +K    
Sbjct: 477 NTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALE 536

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
               PNV T + ++    K+  ++ A+++   M  +G   +  TY+T++ G    G +  
Sbjct: 537 RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMED 596

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+     M   G  P+ +T+NTLI GF K+ +L EA  +  EM      P+VVTY TL +
Sbjct: 597 AVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCH 656

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV- 435
           G  + G  +    + + M   G   + +TY++++ GLCK G+  +A    + + ++ +V 
Sbjct: 657 GLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVA 716

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+   YSALI G C     + A++  + MIR+G  P+   F +L++  C     D   E+
Sbjct: 717 PHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLEL 776

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              M E+    D    + + +     G+   A  L  +M+  G+
Sbjct: 777 FCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGI 820



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 156/343 (45%), Gaps = 29/343 (8%)

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
           +P +   N  ++ L  + RVD A   +  M+ +  S +V T N+++   CKL    R  E
Sbjct: 307 VPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL---RRIPE 363

Query: 285 VFKNMESM----GFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
            ++++E M    G  P+V T++TLI G CN G ++ A + ++ ++   GI PN  T+  L
Sbjct: 364 AYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFL 423

Query: 340 IFGFCKKGKLHEANRIFSEM---------------------KATNVSPNVVTYNTLINGY 378
           + G CK G      + F +M                           P +VTYNTL+ G 
Sbjct: 424 LEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGL 483

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
            + G       L E M+ +G+  D++T+N+++ GLCKE +   A  + K   +    PN 
Sbjct: 484 SKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 543

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
            TYS LI G       + A QL   M+  GCR N   +  ++    +    + A  VL +
Sbjct: 544 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 603

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           M +    PD++  + L  G     +   A+ L R+M   G  P
Sbjct: 604 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 646



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/409 (24%), Positives = 176/409 (43%), Gaps = 39/409 (9%)

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM- 219
            ++  G+  S  FD   ++ D +  + R C  + + +  +        +   A   F +M 
Sbjct: 653  TLCHGLCRSGRFDEAVEILDYM--AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMA 710

Query: 220  RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
            RD    P + + +  +  L  + R+D A  F + M R    P+V T +++++  C  G I
Sbjct: 711  RDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRI 770

Query: 280  ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
            +  +E+F  M   G    +  YN +I+ +C KG  S A      M+ +GI  N +T   +
Sbjct: 771  DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIV 830

Query: 340  IFGFCKKGKLHEANRIF---------------------------------SEMKATNVSP 366
            I   C   ++ EA   F                                   M A   SP
Sbjct: 831  IKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSP 890

Query: 367  NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
            +   Y T+++G  + G+ E+ A L +EM   G   D+ TY  +I GL K  +   A    
Sbjct: 891  DACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYF 950

Query: 427  KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            +++ + +L P+A  YS+LI   C     + A++L +S   SG  P   ++  ++ + C+N
Sbjct: 951  EEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKN 1007

Query: 487  EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
               D+A EV+ EM  K   P   I + L +     G+ + A+KL   ++
Sbjct: 1008 RGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 23/376 (6%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + F+ L       ++   A + F  M++ G    + + N  L  L    R+  A 
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 249 GFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM-GFIPSVTTYNTLIS 306
              + MRR    SPNV T + ++   C  G + +A EV++ M ++ G  P+  TY  L+ 
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425

Query: 307 GHCNKG-LLSLAMKFKNLMEKNG--------------------IQPNVITFNTLIFGFCK 345
           G C  G    L   F+ ++E+                       +P ++T+NTL+ G  K
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSK 485

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G + +A  +   M  + +SP+V+T+N++++G  +        ++++  L  G + +++T
Sbjct: 486 SGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 545

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y+ LI GL K  K  +A  L+  + +     N  TYS ++ G       E A  + + M 
Sbjct: 546 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 605

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
            +GC P+   +  L+  F + +    A  +L EMLE    P  +  + L  GL   G+ +
Sbjct: 606 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 665

Query: 526 LAMKLFRKMEIRGLLP 541
            A+++   M  RG  P
Sbjct: 666 EAVEILDYMAARGCAP 681



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 151/360 (41%), Gaps = 41/360 (11%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +++L        +  +A   F +   +GF P + + +  +  L     VD      +E
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     +PN  T N +++A    G  + A  + + M + G  P + T+  +I G C +G 
Sbjct: 62  MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGE 121

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +  + M   G  P+V     L+   C+ G++ EA   F ++     +P+ VTYNT
Sbjct: 122 IEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNT 181

Query: 374 LINGYGQVGNSEMGA-----------------------------------SLYEEMLRNG 398
           +++G  + G  E                                        ++ M + G
Sbjct: 182 MVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +  + +TY+ALI GLCK GK   A  L++  DKNS       +S+L+ G C     E A 
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLR--DKNSQA-GMFAFSSLLHGLCQAHRLEEAI 298

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           QL K+M    C PN   F  LM+  CQ    D A E+   M E   + D I  + L  GL
Sbjct: 299 QLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGL 355



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 3/303 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  ++ L  + RV  A   +++  +    P V T + V+   C+   +++  ++ + M  
Sbjct: 5   NVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAG 64

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TYNTL++    +G    A      M  NG  P +ITF  +I G CK+G++  
Sbjct: 65  RGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEA 124

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A R+  EM      P+V  +  L++   ++G  +     ++++L  G   D +TYN ++ 
Sbjct: 125 AFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVD 184

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GL K G+ + A  +++ L ++   P   T++  + G     N   A++ + SM ++G  P
Sbjct: 185 GLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSP 244

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   ++ L+   C+    D A  +L    +K         S L  GL    + E A++L 
Sbjct: 245 NTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301

Query: 532 RKM 534
           + M
Sbjct: 302 KAM 304



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 121/268 (45%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N++++  CK G +  A   F+     GF P+V TY+T+I G C    +    K    M
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G  PN +T+NTL+     +G+  EA  +   M A    P ++T+  +I G  + G  
Sbjct: 63  AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E    + +EM+  G   D+  +  L+  LC+ G+  +A +  + +      P+A TY+ +
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G       E A  + + +  S   P    F + +    +  +   A E    M +  +
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFR 532
           +P+++    L  GL   GK ++A+ L R
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR 270



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 115/244 (47%)

Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           + TYN LI+G C  G +  A        + G +P V+T++T+I G C+  ++ +  ++  
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
           EM     +PN VTYNTL+N     G ++   SL E M  NG   +++T+  +I GLCKEG
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
           + + A  +V ++     VP+   ++ L+   C     + A+  ++ ++  G  P+   + 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
            ++    +    + A  VL  + E   +P     +    GL   G    A + F  M   
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 538 GLLP 541
           G+ P
Sbjct: 241 GVSP 244



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 98/197 (49%)

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +VTYN LING  + G      + + + ++ G +  ++TY+ +I GLC++ +  K   L++
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++      PNA TY+ L+     +  ++ AF L + M  +GC P    F +++   C+  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           + + A  V+ EM+++   PD  I + L   L   G+ + A   F+++ + G  P      
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 548 RTINCAPENGEKESGGL 564
             ++   + G  E+ G+
Sbjct: 181 TMVDGLYKAGRLEAAGM 197


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 184/409 (44%), Gaps = 37/409 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+  + + D    +F  ++      D+  L + ++       +    A   F QM 
Sbjct: 335 TIIDGLCKAQAIDKAEGVFQQMIDKGVKPDN--LTYTIIIDGLCKAQSVDRAEGVFQQMI 392

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G  P   + N  +   L + + +  +   KEM  + + P+V+T  +++   CK G   
Sbjct: 393 DKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCN 452

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F +M   G  PSVT Y  ++ G+  KG LS      NLM  NGI PN   FNT+I
Sbjct: 453 EARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVI 512

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG------------------ 382
             + K+  + E   IF +MK   +SPNVVTY TLI+   ++G                  
Sbjct: 513 CAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVT 572

Query: 383 ------NS-----------EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
                 NS           E    L+ EML  GI+ DI+ +N ++  LCKEG+  +A  L
Sbjct: 573 PNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRL 632

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           +  +    L P+  +Y+ LI G C     + A +L   M+ +G +PN   +  L+  +C+
Sbjct: 633 IDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCK 692

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
               D A  +  EML K + P     + + +GL   G+   A +L+  M
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNM 741



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 167/368 (45%), Gaps = 2/368 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++ +       ++   A D F QM + G  P   + N  +  L  ++ VD+A G +++
Sbjct: 226 VTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQK 285

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P+  T N ++   CK   ++RA  VF+ M   G  P   TYNT+I G C    
Sbjct: 286 MVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQA 345

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A      M   G++P+ +T+  +I G CK   +  A  +F +M    V PN  TYN 
Sbjct: 346 IDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY   G  E      +EM  + ++ D+ TY  L+  LCK GK  +A  L   + +  
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           + P+ + Y  ++ G   +        L   M+ +G  PN  IF  ++  + +    D   
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTIN 551
            + ++M ++ ++P+ +    L   L   G+ + A+  F +M   G+ P    F+ L    
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585

Query: 552 CAPENGEK 559
           C  +  EK
Sbjct: 586 CTVDKWEK 593



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 189/443 (42%), Gaps = 29/443 (6%)

Query: 126 FFTWVQTHKPSSLTLE--------THSIVLHILTKNRKFKSSE----------------- 160
           FF   Q  K  SL LE        T++ ++  L K ++   +E                 
Sbjct: 203 FFNEGQVDKAYSLFLEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262

Query: 161 --SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQ 218
             +I+ G+  +   D+   +F  ++   +    S + ++ +       +    A   F Q
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVD--KGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M D G  P   + N  +  L  ++ +D A G +++M    + P+  T  +++   CK   
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++RA  VF+ M   G  P+  TYN LI G+ + G     ++    M  + ++P+V T+  
Sbjct: 381 VDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGL 440

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+   CK GK +EA  +F  M    + P+V  Y  +++GYG+ G       L   M+ NG
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           I  +   +N +I    K     +  ++   + +  L PN  TY  LI   C     + A 
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +  MI  G  PN  +F  L+   C  + +++  E+ LEML + + PD +  + +   L
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+   A +L   M   GL P
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKP 643



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/385 (24%), Positives = 181/385 (47%), Gaps = 4/385 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           S  ++L+G+ D    +   +L   ++      C    + ++++   + +  +   A   F
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P + + N  +  L  ++ VD A   +++M    + PN  T N ++   CK 
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             ++ A  VF+ M   G  PS  TYNT+I G C    +  A      M   G++P+ +T+
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           NT+I G CK   + +A  +F +M    V P+ +TY  +I+G  +  + +    ++++M+ 
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G+K +  TYN LI G    G+ ++    +K++  + L P+  TY  L+   C       
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A  L+ SMIR G +P+  I+ +++  + +        ++L  M+   ++P+  I + +  
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLP 541
                   +  M +F KM+ +GL P
Sbjct: 514 AYAKRAMIDEVMHIFIKMKQQGLSP 538



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 151/323 (46%), Gaps = 35/323 (10%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N ISPN    N V+ A+ K  +I+  + +F  M+  G  P+V TY TLI   C  G 
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGR 555

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFG------------------------------- 342
           +  A+   N M   G+ PN + FN+L++G                               
Sbjct: 556 VDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNT 615

Query: 343 ----FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
                CK+G++ EA R+   M    + P+V++YNTLI+G+      +    L + M+  G
Sbjct: 616 VLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG 675

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           +K +I++YN L+ G CK G+   A  L +++ +  + P   TY+ ++ G         A 
Sbjct: 676 LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEAR 735

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +LY +MI+S    +   + +++  FC+N  FD A ++   +    +  D I  + +  GL
Sbjct: 736 ELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGL 795

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+ E AM LF  +   GL+P
Sbjct: 796 FKGGRKEDAMDLFAAIPANGLVP 818



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 161/317 (50%), Gaps = 7/317 (2%)

Query: 232 NKFLSSLLDSERVDIALG-FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM- 289
           N+ L  L D++RV  A+    ++M        V + N ++   C     E A E+   M 
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMV 182

Query: 290 --ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
             +     P V +YN +I+G  N+G +    K  +L  + G+ P+V+T+NT+I G CK  
Sbjct: 183 DGQDSSCSPDVVSYNIVINGFFNEGQVD---KAYSLFLEMGVSPDVVTYNTIIDGLCKAQ 239

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           ++  A  +F +M    V PN VTYNT+I+G  +    +M   ++++M+  G+K   +TYN
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I GLCK     +A  + + +    + P+  TY+ +I G C  +  ++A  +++ MI  
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P+   + +++   C+ +  DRA  V  +M++K + P++   + L  G    G+ E  
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419

Query: 528 MKLFRKMEIRGLLPKGF 544
           ++  ++M    L P  F
Sbjct: 420 VQRIKEMSAHDLEPDVF 436



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 157/303 (51%), Gaps = 10/303 (3%)

Query: 246 IALGFYKEMRR---NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +A+  +  M R   N+++P+  T ++V+  FC++G +E     F  +   G+       N
Sbjct: 64  LAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVN 123

Query: 303 TLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-- 359
            L+ G C+   +  AM      M + G +  V+++NTL+ G C + +  EA  +   M  
Sbjct: 124 QLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVD 183

Query: 360 -KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
            + ++ SP+VV+YN +ING+   G  +   SL+ EM   G+  D++TYN +I GLCK  +
Sbjct: 184 GQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQE 240

Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
             +A  + + + +  + PN  TY+ +I G C  +  + A  +++ M+  G +P+   +  
Sbjct: 241 VDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNT 300

Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
           ++   C+ +  DRA  V  +M+++ + PD +  + +  GL      + A  +F++M  +G
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360

Query: 539 LLP 541
           + P
Sbjct: 361 VKP 363



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 153/345 (44%), Gaps = 37/345 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L        +  +A   F QM + G  P     N  +  L   ++ +     + E
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLE 600

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    I P++   N V+   CK G +  A  +  +M  MG  P V +YNTLI GHC    
Sbjct: 601 MLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR 660

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+K  + M   G++PN++++NTL+ G+CK G++  A  +F EM    V+P V TYNT
Sbjct: 661 MDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNT 720

Query: 374 LINGYGQVGNSEMGASLYEEMLRN-----------------------------------G 398
           ++NG  + G       LY  M+++                                    
Sbjct: 721 ILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMD 780

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS-ERA 457
           +++DI+T+N +I GL K G+ + A  L   +  N LVP+  TY  LI    + + S E  
Sbjct: 781 LQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYR-LIAENLIEEGSLEEL 839

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
             L+  M +SG  PN H+   L+       +  RA   L ++ EK
Sbjct: 840 DCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEK 884



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 35/233 (15%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   Y    +  NA   F +M   G  P +E+ N  L+ L  S R   A   Y  M 
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM----------------------- 292
           ++R   ++ T ++++  FCK    + A ++F+++ SM                       
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802

Query: 293 ------------GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
                       G +PSV TY  +      +G L       ++MEK+G  PN    N LI
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI 862

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
                +G++  A    S++   N S    T + LI+ + +    +   SL E+
Sbjct: 863 RKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEK 915


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 197/430 (45%), Gaps = 27/430 (6%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY------- 186
           K SSL    +S ++H   ++   + +E ++R  ++ D  D P  ++ S+++ Y       
Sbjct: 363 KLSSLNGIIYSNIIHAHCQSGNMERAEELVRE-MEEDGIDAPIDVYHSMMHGYTIIQNEN 421

Query: 187 ---------RMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
                    + C   P +  +  L   Y    K   A     +M   G    I+  NK  
Sbjct: 422 KCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCG----IKHNNKTY 477

Query: 236 SSLLDS----ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           S L++          A   ++EM R+ + P+    N+++ AFCK+G ++RA+ + + M+ 
Sbjct: 478 SMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQK 537

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
               PS   +  +I G+   G +  A+   +LM ++G  P V+T+N LI G  +K K+  
Sbjct: 538 ERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQR 597

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +  +M    ++PN  TY  ++ GY   G+       + ++  +G+K+D+  Y  L+ 
Sbjct: 598 AVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLR 657

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
             CK G+ + A  + +++    +  N   Y+ LI G   R +   A  L K M   G  P
Sbjct: 658 ACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPP 717

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N H +   ++  C+  D  RA +V+ EM++  + P+    + L  G       + A+K F
Sbjct: 718 NIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCF 777

Query: 532 RKMEIRGLLP 541
            +M++ GL P
Sbjct: 778 EEMKLAGLKP 787



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 164/358 (45%), Gaps = 10/358 (2%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + +  VF  L   YA  +  R A     +M+  G    I + +  +S          
Sbjct: 293 RGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSQS 352

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KE +    S N    + ++HA C+ G +ERA E+ + ME  G    +  Y++++ 
Sbjct: 353 ADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMH 412

Query: 307 GHC-----NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           G+      NK L+     F+ L E  G +P++I++  L+  + K GK+ +A  I  EM++
Sbjct: 413 GYTIIQNENKCLVV----FERLKE-CGFKPSIISYGCLLNLYVKIGKVAKALSISKEMES 467

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
             +  N  TY+ LING+  + +     +++EEMLR+G++ D   YN LI   CK G   +
Sbjct: 468 CGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDR 527

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  +++ + K  + P+   +  +I G  V  + + A      M RSGC P    +  L+ 
Sbjct: 528 AICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIH 587

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              +     RA  VL +M    + P+    + +  G    G    A + F K++  GL
Sbjct: 588 GLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 645



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 159/339 (46%), Gaps = 26/339 (7%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+   ++ G +    F     +F+ +L S    D +  +++LL + +    K  N     
Sbjct: 475 KTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRA--IYNLLIEAFC---KMGNMDRAI 529

Query: 217 C----------QMRDYGFLPIIE--SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           C          Q  +  F PIIE  +    + S LD+  +D+       MRR+   P V 
Sbjct: 530 CILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDT--LDL-------MRRSGCVPTVM 580

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N ++H   +   ++RAV V   M   G  P+  TY  ++ G+   G +  A ++   +
Sbjct: 581 TYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKI 640

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +++G++ +V  + TL+   CK G++  A  +  EM    +  N   YN LI+G+ + G+ 
Sbjct: 641 KESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDV 700

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
                L ++M  +G+  +I TY + I   CK G  ++A  +++++    L PN  TY+ L
Sbjct: 701 WEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTL 760

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           I G       +RA + ++ M  +G +P++  +  L+++ 
Sbjct: 761 IKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSL 799



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 143/312 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   + H   F NA   F +M   G  P     N  + +      +D A+   ++M+
Sbjct: 477 YSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ 536

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R+ P+      ++  +   G ++ A++    M   G +P+V TYN LI G   K  + 
Sbjct: 537 KERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQ 596

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + M   GI PN  T+  ++ G+   G + +A   F+++K + +  +V  Y TL+
Sbjct: 597 RAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 656

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               + G  +   ++  EM    I  +   YN LI G  + G   +A  L+K + ++ + 
Sbjct: 657 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVP 716

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  TY++ I   C   + +RA ++ + M+  G +PN   +  L+  + +    DRA + 
Sbjct: 717 PNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKC 776

Query: 496 LLEMLEKCMAPD 507
             EM    + PD
Sbjct: 777 FEEMKLAGLKPD 788



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 142/298 (47%), Gaps = 6/298 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ MR   I PN +    ++HA+     +  A+   + M+S G   ++ TY+ LIS
Sbjct: 283 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILIS 342

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQ---PNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           G      ++ +    NL ++   +    N I ++ +I   C+ G +  A  +  EM+   
Sbjct: 343 GFAK---INDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDG 399

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +   +  Y+++++GY  + N      ++E +   G K  I++Y  L+    K GK  KA 
Sbjct: 400 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 459

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + K+++   +  N  TYS LI G     +   AF +++ M+RSG +P++ I+ +L+  F
Sbjct: 460 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 519

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  + DRA  +L +M ++ M P +     +  G    G  + A+     M   G +P
Sbjct: 520 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVP 577



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 12/216 (5%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   F  +I  + K+G  H A   F  M+A  + PN   + +L++ Y    +     S
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
             EEM   G+++ I+TY+ LI G  K   ++ A  L K+        N   YS +I   C
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS--TFCQNEDFDRAAEVLLEMLEKCMAPD 507
              N ERA +L + M   G      ++  +M   T  QNE+      V+ E L++C    
Sbjct: 381 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNEN---KCLVVFERLKECGFKP 437

Query: 508 SII----LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           SII    L  LY  +   GK   A+ + ++ME  G+
Sbjct: 438 SIISYGCLLNLYVKI---GKVAKALSISKEMESCGI 470



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 114/281 (40%), Gaps = 35/281 (12%)

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           PS   +  +I  +  +G    A      M   GI+PN   F +L+  +     +  A   
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSC 321

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
             EMK+  +   +VTY+ LI+G+ ++ +S+   +L++E       ++ + Y+ +I   C+
Sbjct: 322 VEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHCQ 381

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS--------------------- 454
            G  ++A  LV++++++ +      Y +++ G  + +N                      
Sbjct: 382 SGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIIS 441

Query: 455 --------------ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
                          +A  + K M   G + N   + ML++ F    DF  A  +  EML
Sbjct: 442 YGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEML 501

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + PD  I + L       G  + A+ +  KM+   + P
Sbjct: 502 RSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQP 542


>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g06000-like [Glycine max]
          Length = 511

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 235/495 (47%), Gaps = 56/495 (11%)

Query: 75  KGQDLDFVNIAYSHLIHSDWKK--LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQT 132
           +G +  FV IAY+  + ++     +   S HLTP  V  V+ K+        +F  + + 
Sbjct: 5   RGAEAWFVKIAYTVCVRANLLDPLVGYFSNHLTPSLVYEVVDKLSIIPHFGFKFVEFSRH 64

Query: 133 HKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSS 192
               S +  T+S++L  L ++    +++                     ++Y +  CD  
Sbjct: 65  KLHMSHSYLTYSLLLRSLCRSNLHHTAK---------------------VVYDWMRCDGQ 103

Query: 193 ---PLVFDLLFKTYAHRKKFRNATDTFC--QMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
                +   L  +YA   +   + +     Q  + G   ++   N   + L+   +V  A
Sbjct: 104 IPDNRLLGFLVSSYAIVGRLDVSRELLADVQCNNVGVNAVVY--NDLFNVLIRQNKVVDA 161

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           +  ++E+ R R  P  YT+N+++   C++G I+ A ++ K++ S G +P V TYNTLI G
Sbjct: 162 VVLFRELIRLRYKPVTYTVNILIRGLCRVGEIDEAFKLLKDLRSFGCLPDVITYNTLIHG 221

Query: 308 HCNKGLLSLAMKFKNLMEK---NG-IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
            C   L++   + ++L+ +   NG   P+V+++  +I G+CK  K+ E + +F EM  + 
Sbjct: 222 LC---LINEVDRARSLLREVCLNGEFAPDVVSYTMIISGYCKLRKMEEGSLLFDEMINSG 278

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
            +PN  T+N LI+G+G++G+     +LY +ML  G   D+ T+ +LI G  +  +  +A 
Sbjct: 279 TAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLPDVATFTSLINGHFRVRQVHQAM 338

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            +   +++ ++  +  TYS L++G C      +A  + + +  S   P   I+  ++  +
Sbjct: 339 DMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGY 398

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C++ + D A +++ EM      PD +  + L  G  HC              ++G +P+ 
Sbjct: 399 CKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIG--HC--------------MKGRMPEA 442

Query: 544 ---FDKLRTINCAPE 555
              FDK+  + CAP+
Sbjct: 443 IGFFDKMLAVGCAPD 457



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 109/237 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++   Y   +K    +  F +M + G  P   + N  +        +  AL  Y +M 
Sbjct: 251 YTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKML 310

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P+V T   +++   ++  + +A++++  M       S+ TY+ L+SG CN   L 
Sbjct: 311 VQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLH 370

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A     L+ ++ I P    +N +I G+CK G + EAN+I +EM+     P+ +T+  LI
Sbjct: 371 KARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILI 430

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
            G+   G        +++ML  G   D +T N L   L K G   +AA + + L +N
Sbjct: 431 IGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQN 487



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 1/177 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      F  L   +   ++   A D + +M +      + + +  +S L ++ R+  A 
Sbjct: 314 CLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKAR 373

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + +  + I P  +  N V+  +CK G ++ A ++   ME     P   T+  LI GH
Sbjct: 374 DILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGH 433

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           C KG +  A+ F + M   G  P+ IT N L     K G   EA R+  E+ A N++
Sbjct: 434 CMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARV-KEVLAQNLT 489


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 141/528 (26%), Positives = 228/528 (43%), Gaps = 72/528 (13%)

Query: 85  AYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLE---FFTWVQTHKPSSLTLE 141
            YSH   + +  +  L   +  F+V   LLK  KD  L  +   F   ++ +  + L  +
Sbjct: 94  GYSHTFDACYLLIDKLGA-VGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQ 152

Query: 142 THSIVLH---ILTKNRKFKSSESILRGILDSDS--------FDLPSKLFDSILYSY---- 186
              ++L    + + +  FKS   +L  ++D D         +D+ S+     +Y++    
Sbjct: 153 ATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVM 212

Query: 187 -RMC-----DSS-PLVFDL----------LFKTYAHRKKFRNATDTFCQMRDYGFL---- 225
             +C     DS+  L+ D+          +++T  H     N      Q+ +  FL    
Sbjct: 213 KALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCE 272

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +++ N  +  L  + R+  A      M     S +  T   +MH  C++G ++ A  +
Sbjct: 273 PDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL 332

Query: 286 --------------------------------FKNMESMGFIPSVTTYNTLISGHCNKGL 313
                                           + NM   G+ P   T+N +I G   KG 
Sbjct: 333 LNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGY 392

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A++  N M     +PNVIT+  LI GFCK+G+L EA  I + M A  +S N V YN 
Sbjct: 393 LVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNC 452

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI    + GN E    L+ EM   G K DI T+N+LI GLCK  K ++A  L  D+    
Sbjct: 453 LICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEG 512

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++ N  TY+ L+    +R + ++AF+L   M+  GC  +   +  L+   C+    ++  
Sbjct: 513 VIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGL 572

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +  EML K + P  I  + L SGL   GK   A+K  + M  RGL P
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTP 620



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 201/472 (42%), Gaps = 52/472 (11%)

Query: 102 THLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSES 161
           T ++PF++   LL++  D   S+E F      K  S T +   +++  L     FK  E 
Sbjct: 62  TPISPFQLCK-LLELPLDIPTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEK 120

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+ + D           + +L+   +       F L+ K Y        AT     M  
Sbjct: 121 LLKQMKD-----------EGLLFKESL-------FILIMKHYGKAGLPGQATRLLLDMWG 162

Query: 222 -YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            Y   P  +S N  L  L+D +   +A   + +M    +SP VYT  +VM A C +  ++
Sbjct: 163 VYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVD 222

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  + ++M   G +P+   Y TLI   C    +S A++    M     +P+V TFN +I
Sbjct: 223 SACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVI 282

Query: 341 FGFCKKGKLHEANRIFSEMKATNVS-------------------------------PNVV 369
            G C+ G++HEA ++   M     S                               PN V
Sbjct: 283 HGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTV 342

Query: 370 TYNTLINGYGQVGNSEMGAS-LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            YNTLI+GY   G  E     LY  M+  G + D  T+N +I GL K+G    A  L+ +
Sbjct: 343 LYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNE 402

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +      PN  TY+ LI G C +   E A ++  SM   G   N   +  L+   C++ +
Sbjct: 403 MVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGN 462

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            + A ++  EM  K   PD    + L +GL    K E A+ L+  M + G++
Sbjct: 463 IEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVI 514



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 163/349 (46%), Gaps = 1/349 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDT-FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           ++++ L   Y    +F  A D  +  M   G+ P   + N  +  L+    +  AL    
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM   R  PNV T  ++++ FCK G +E A E+  +M + G   +   YN LI   C  G
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A++    M   G +P++ TFN+LI G CK  K+ EA  ++ +M    V  N VTYN
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++ +    + +    L +EML  G  +D +TYN LI  LCK G  +K   L +++   
Sbjct: 522 TLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGK 581

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            + P   + + LI+G C       A +  + MI  G  P+   +  L++  C+      A
Sbjct: 582 GIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  ++  + + PD+I  + L S   H G    A  L  K    G +P
Sbjct: 642 SNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIP 690



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 35/250 (14%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L            A   F +M   G  P I + N  ++ L  + +++ AL  Y +M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 256 RNRISPNVYTLNMVMHAF-----------------------------------CKLGIIE 280
              +  N  T N ++HAF                                   CK G +E
Sbjct: 510 LEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVE 569

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           + + +F+ M   G  P++ + N LISG C  G ++ A+KF   M   G+ P+++T+N+LI
Sbjct: 570 KGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLI 629

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CK G + EA+ +F+++++  + P+ +TYNTLI+ +   G       L  + + +G  
Sbjct: 630 NGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFI 689

Query: 401 VDILTYNALI 410
            + +T++ LI
Sbjct: 690 PNEVTWSILI 699



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 2/186 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++   L  DS     KL D +L+  R C    + ++ L K              F +M 
Sbjct: 522 TLVHAFLMRDSIQQAFKLVDEMLF--RGCPLDNITYNGLIKALCKTGAVEKGLGLFEEML 579

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P I SCN  +S L  + +V+ AL F ++M    ++P++ T N +++  CK+G ++
Sbjct: 580 GKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQ 639

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F  ++S G  P   TYNTLIS HC++G+ + A         +G  PN +T++ LI
Sbjct: 640 EASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699

Query: 341 FGFCKK 346
               KK
Sbjct: 700 NYIVKK 705


>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
          Length = 374

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 143/263 (54%)

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           N + PN  T  ++++ FCK+G +E A  +  +M+  G   +   +NT+I G+C KG++  
Sbjct: 102 NGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDD 161

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+K K  MEK G++ ++ T+NTL  G C+  +L EA  +   M    V PN VTY TLI+
Sbjct: 162 ALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLIS 221

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
            + + G+      L+ EM   G    ++TYN +I G  K+G  ++A    K+++K   VP
Sbjct: 222 IHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVP 281

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++L+ G CV    + A +L++ M + G  PN   +  L+S   +    + A ++ 
Sbjct: 282 DVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLY 341

Query: 497 LEMLEKCMAPDSIILSELYSGLH 519
            +ML+  + PD  + S L   LH
Sbjct: 342 DDMLKAGLIPDDSLYSALVGSLH 364



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           VD AL     M +  +  ++YT N +    C++  ++ A  +   M  MG +P+  TY T
Sbjct: 159 VDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTT 218

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LIS HC  G +  A +    M + G  P+V+T+N +I G+ KKG + EA R   EM+   
Sbjct: 219 LISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKG 278

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+V TY +L++G+   G  ++   L+EEM + G + +++ Y ALI GL KEG+++ A 
Sbjct: 279 FVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAF 338

Query: 424 YLVKDLDKNSLVPNASTYSALI 445
            L  D+ K  L+P+ S YSAL+
Sbjct: 339 QLYDDMLKAGLIPDDSLYSALV 360



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 148/310 (47%), Gaps = 15/310 (4%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            +  L  S RVD A     +M R+ +S N    N ++  + +     R  E+ + ME+ G
Sbjct: 20  VVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMENEG 79

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
              +V        G C         K  +    NG++PN  T+  LI GFCK G++  A 
Sbjct: 80  IEATVG------DGTCGG-----PPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAE 128

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            + ++M+   V  N + +NT+I+GY + G  +    +   M + G+++DI TYN L  GL
Sbjct: 129 MLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGL 188

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C+  +  +A  L+  + +  +VPN  TY+ LI+  C   +   A +L++ M   G  P+ 
Sbjct: 189 CRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSV 248

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLF 531
             + +++  + +      A     EM +K   PD    + L  G  HC  GK ++A+KLF
Sbjct: 249 VTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHG--HCVNGKVDVALKLF 306

Query: 532 RKMEIRGLLP 541
            +M+ RG  P
Sbjct: 307 EEMKQRGTEP 316



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++F+ +   Y  +    +A      M   G    I + N     L    R+D A      
Sbjct: 144 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 203

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + PN  T   ++   CK G +  A  +F+ M   G  PSV TYN +I G+  KG 
Sbjct: 204 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGS 263

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +F+  MEK G  P+V T+ +L+ G C  GK+  A ++F EMK     PNVV Y  
Sbjct: 264 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 323

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           LI+G  + G SE    LY++ML+ G+  D   Y+AL+
Sbjct: 324 LISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALV 360



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 28/234 (11%)

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY--------------- 378
           +  + ++ G CK G++ +A R+  +M    VS N + YN+L++ Y               
Sbjct: 15  LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 74

Query: 379 -------GQVGNSEMGA--SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
                    VG+   G    + +E + NG++ +  TY  LI G CK G+ + A  L+ D+
Sbjct: 75  MENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 134

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               +  N   ++ +I G C +   + A ++  +M + G   + + +  L    C+    
Sbjct: 135 QGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 194

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP 541
           D A  +L  M+E  + P+ +  + L S   HC   ++  A +LFR+M  +G  P
Sbjct: 195 DEAKTLLHIMIEMGVVPNYVTYTTLIS--IHCKDGDMVEARRLFREMAEKGATP 246



 Score = 55.8 bits (133), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + ++++   YA +   R A     +M   GF+P + +    +     + +VD+AL  +
Sbjct: 247 SVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 306

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           +EM++    PNV     ++    K G  E A +++ +M   G IP  + Y+ L+ 
Sbjct: 307 EEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVG 361


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 161/338 (47%)

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
           +K + A +   +M + G  P + +C   +++     R+  AL   + M+     PNV+T 
Sbjct: 161 RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTY 220

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++  FC  G + +A+ +   M   G  P   TYN LI G C  G +  A +   LME 
Sbjct: 221 NALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEG 280

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           +G+  +  T+N LI   CK G+  +A  +F  ++   + PN VT+N+LING  + G  ++
Sbjct: 281 DGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDI 340

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
                E+M+  G   D  TY++ I  LCK   +++    + ++ +  + P+   Y+ +I 
Sbjct: 341 AWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH 400

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                +N     + +  M+ SGC P+   +   M  +C     + A  VL+EM +  +  
Sbjct: 401 KLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTV 460

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           D++  + L  G    G+ + A+ + ++M     +P  F
Sbjct: 461 DTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQF 498



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/349 (26%), Positives = 164/349 (46%), Gaps = 4/349 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ + ++   R    +A      M   G+ P   + N  +     + +VD+A   + +M 
Sbjct: 14  YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
               + +V +   ++  FC+ G I+ AVE+F  M+     P +  Y  L+ G C  G   
Sbjct: 74  LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             +     M++ G +P+   +  ++   C + K  EA  +  EM    ++P VVT   +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N Y + G       + E M   G K ++ TYNAL+ G C EGK  KA  L+  +    + 
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+A TY+ LI GQC+  + E AF+L + M   G   +++ +  L++  C++   D+A  +
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSL 309

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              +  + + P+++  + L +GL   GK ++A K   KM   G  P  +
Sbjct: 310 FDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTY 358



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 4/317 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L   Y    +   A D F +M   GF   + S    +    ++ R+D A+  + EM 
Sbjct: 49  FNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD 108

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +    P+++    ++   CK G  E  + + + M+ +G+ PS   Y  ++   C +    
Sbjct: 109 Q----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAK 164

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +    M + G+ P V+T   +I  +CK+G++ +A R+   MK     PNV TYN L+
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 224

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G+   G      +L  +M   G+  D +TYN LI G C +G  + A  L++ ++ + L+
Sbjct: 225 QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 284

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ALI   C    +++A  L+ S+   G +PN   F  L++  C++   D A + 
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKF 344

Query: 496 LLEMLEKCMAPDSIILS 512
           L +M+     PD+   S
Sbjct: 345 LEKMVSAGCTPDTYTYS 361



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 4/298 (1%)

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           T N V+ + C+   +  A+     M   G+ P   T+N+LI G+C    + +A    + M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G   +V+++  LI GFC+ G++ EA  +F EM      P++  Y  L+ G  + G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           E G  +   M   G +     Y A++   C E K K+A  +++++ +  L P   T +A+
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I   C       A ++ + M   GC+PN   +  L+  FC      +A  +L +M    +
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
            PD++  + L  G    G  E A +L R ME  GL+   +     IN   ++G  +  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 306



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/364 (22%), Positives = 162/364 (44%), Gaps = 20/364 (5%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDS-------------DSFDLPSKLFD 180
           +PS+     ++ V+      RK K +E +L+ + +              +++    ++ D
Sbjct: 144 RPST---RAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSD 200

Query: 181 SI----LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           ++    L   R C  +   ++ L + + +  K   A     +MR  G  P   + N  + 
Sbjct: 201 ALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIR 260

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
                  ++ A    + M  + +  + YT N +++A CK G  ++A  +F ++E+ G  P
Sbjct: 261 GQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP 320

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  T+N+LI+G C  G + +A KF   M   G  P+  T+++ I   CK     E     
Sbjct: 321 NAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFI 380

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
            EM   +V P+ V Y  +I+   +  N  + A  + EM+ +G   D++TY   +   C E
Sbjct: 381 GEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIE 440

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G+  +A  ++ ++ KN +  +   Y+ L+ G      ++ A  + K M      PN+  +
Sbjct: 441 GRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTY 500

Query: 477 EMLM 480
            +L+
Sbjct: 501 FILL 504



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/379 (23%), Positives = 165/379 (43%), Gaps = 56/379 (14%)

Query: 213 TDTFCQMRD----YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
           TD  C + D     G  P   + N  ++ L  S +VDIA  F ++M     +P+ YT + 
Sbjct: 303 TDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSS 362

Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
            +   CK+   +  +     M      PS   Y  +I     +    L  +    M  +G
Sbjct: 363 FIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSG 422

Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
             P+V+T+ T +  +C +G+L+EA  +  EM    V+ + + YNTL++G+  +G ++   
Sbjct: 423 CNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV 482

Query: 389 SLYEEM---------------LRNGIKV----DIL------------------------- 404
           S+ ++M               LR+ +++    D+L                         
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKK 542

Query: 405 --------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                   TY++++ G  ++G+T++A  LV  + ++S+  N   Y+AL+T  C  K    
Sbjct: 543 NEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLD 602

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A+ L  SMI+ G  P+   ++ L+S        D+A E+ +    K  +PD I+   +  
Sbjct: 603 AWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIID 662

Query: 517 GLHHCGKDELAMKLFRKME 535
           GL   G  +++ ++   +E
Sbjct: 663 GLIKKGHSDISREMIIMLE 681



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/328 (18%), Positives = 136/328 (41%), Gaps = 38/328 (11%)

Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP 193
           KPS++    ++IV+H L K R                ++ L ++ +  ++ S   C+   
Sbjct: 389 KPSTVN---YTIVIHKLLKER----------------NYGLVARTWGEMVSS--GCNPDV 427

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +    + Y    +   A +   +M   G      + N  +       + D A+   K+
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIE-----------RAVEV------FKNMESMGFIP 296
           M      PN +T  +++    ++ ++E           +A+E+      F  M+   F+P
Sbjct: 488 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 547

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +  TY++++ G    G    A    +LM+++ I  N   +  L+  FCK  +  +A  + 
Sbjct: 548 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 607

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M      P++++Y  L++G    G ++    ++          D + +  +I GL K+
Sbjct: 608 CSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 667

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           G +  +  ++  L++ +  P+  TY+ L
Sbjct: 668 GHSDISREMIIMLERMNCRPSHQTYAML 695


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 168/338 (49%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + +  ++ L    RV  AL     M      P + TLN +++  C  G +  A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V +   M   GF P+  TY  ++   C  G  +LAM+    ME+  I+ + + ++ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G L  A  +F+EM+      +++ Y TLI G+   G  + GA L  +M++  I  D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ ++ALI    KEGK ++A  L K++ +  + P+  TY++LI G C     ++A  +  
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC PN   F +L++ +C+    D   E+  +M  + +  D++  + L  G    G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           K E+A +LF++M  R + P        ++   +NGE E
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A +   +M + G  P + + N  ++ L  + +V  A+     
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T   V+   CK G    A+E+ + ME          Y+ +I G C  G 
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N ME  G + ++I + TLI GFC  G+  +  ++  +M    ++P+VV ++ 
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       L++EM++ GI  D +TY +LI G CKE +  KA +++  +    
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  T++ LI G C     +   +L++ M   G   +   +  L+  FC+    + A 
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + PD +    L  GL   G+ E A+++F K+E
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 147/298 (49%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           NA + F +M   GF   I      +     + R D      ++M + +I+P+V   + ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             F K G +  A E+ K M   G  P   TY +LI G C +  L  A    +LM   G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+ TFN LI G+CK   + +   +F +M    V  + VTYNTLI G+ ++G  E+   L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++EM+   ++ DI++Y  L+ GLC  G+ +KA  + + ++K+ +  +   Y+ +I G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               + A+ L+ S+   G +P+   + +++   C+      A  +  +M E   +P+ 
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 44/389 (11%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A D F +M      P +   ++  S +  +++ D+ L   K+M    I+ N+YTL++++
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  C+   +  A      +  +G+ P   T++TLI+G C +G +S A++  + M + G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY------------------- 371
           P +IT N L+ G C  GK+ +A  +   M  T   PN VTY                   
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 372 ----------------NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
                           + +I+G  + G+ +   +L+ EM   G K DI+ Y  LI G C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+    A L++D+ K  + P+   +SALI           A +L+K MI+ G  P+   
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+  FC+    D+A  +L  M+ K   P+    + L +G       +  ++LFRKM 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 536 IRGL---------LPKGFDKLRTINCAPE 555
           +RG+         L +GF +L  +  A E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKE 443



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 164/371 (44%), Gaps = 35/371 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A     +M + GF P   +    L  +  S +  +A+   ++M   +I  +    +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC------------------ 309
           +++   CK G ++ A  +F  ME  GF   +  Y TLI G C                  
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 310 -----------------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
                             +G L  A +    M + GI P+ +T+ +LI GFCK+ +L +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N +   M +    PN+ T+N LINGY +    + G  L+ +M   G+  D +TYN LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C+ GK + A  L +++    + P+  +Y  L+ G C     E+A ++++ + +S    +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I+ +++   C     D A ++   +  K + PD    + +  GL   G    A  LFR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 533 KMEIRGLLPKG 543
           KME  G  P G
Sbjct: 552 KMEEDGHSPNG 562



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 167/342 (48%), Gaps = 3/342 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+    S D    LF+ +    +   +  +++  L + + +  ++ +       M  
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEM--EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P + + +  +   +   ++  A   +KEM +  ISP+  T   ++  FCK   +++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M S G  P++ T+N LI+G+C   L+   ++    M   G+  + +T+NTLI 
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC+ GKL  A  +F EM +  V P++V+Y  L++G    G  E    ++E++ ++ +++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  YN +I G+C   K   A  L   L    + P+  TY+ +I G C + +   A  L+
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           + M   G  PN   + +L+       D  ++A+ L+E +++C
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIKRC 591



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 2/325 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG   +  +D  +KL   ++   R      + F  L   +    K R A +   +M 
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIK--RKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   +    +       ++D A      M      PN+ T N++++ +CK  +I+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+F+ M   G +    TYNTLI G C  G L +A +    M    ++P+++++  L+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  G+  +A  IF +++ + +  ++  YN +I+G       +    L+  +   G+K
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+ TYN +I GLCK+G   +A  L + ++++   PN  TY+ LI       ++ ++ +L
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQ 485
            + + R G   +       +ST  +
Sbjct: 585 IEEIKRCGFSVDASTLRFALSTLAR 609



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 21/379 (5%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +  D  + + D  L   + C  +   F++L   Y       +  + F +M 
Sbjct: 357 SLIDGFCKENQLDKANHMLD--LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +    +  ++++A   ++EM   R+ P++ +  +++   C  G  E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+ +E       +  YN +I G CN   +  A      +   G++P+V T+N +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKKG L EA+ +F +M+    SPN  TYN LI  +   G++   A L EE+ R G  
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE--RAF 458
           VD  T   L   L    +  KA +           P+  T++ L+   C+ +N+    A 
Sbjct: 595 VDAST---LRFALSTLARMLKAGH----------EPDVFTFTTLLRPFCLEENASVYDAP 641

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L+K+M   G +PN   +  ++          +   VL +M E+   P+++  S   SGL
Sbjct: 642 TLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701

Query: 519 HHCGKD--ELAMKLFRKME 535
             C +D    A+ L RKME
Sbjct: 702 --CKQDLHGSAILLLRKME 718



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 147/297 (49%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D A+  ++EM R+R  P +   + +     +    +  +++ K ME  G   ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+  C    LSLA      + K G +P+ +TF+TLI G C +G++ EA  +   M     
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P ++T N L+NG    G       L + M+  G + + +TY  ++  +CK G+T  A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L++ +++  +  +A  YS +I G C   + + AF L+  M   G + +  I+  L+  FC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +D  A++L +M+++ + PD +  S L       GK   A +L ++M  RG+ P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 119/279 (42%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + AV++F+ M      P +  ++ L S         L +     ME  GI  N+ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   C+  KL  A     ++      P+ VT++TLING    G       L + M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K  ++T NAL+ GLC  GK   A  L+  + +    PN  TY  ++   C    +  A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M     + +   + +++   C++   D A  +  EM  K    D II + L  G  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + G+ +   KL R M  R + P        I+C  + G+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 2/127 (1%)

Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC--KLGIIERAVEVFKNMESMGFIP 296
           +D+  +  AL     M +    P+V+T   ++  FC  +   +  A  +FKNM++MG+ P
Sbjct: 595 VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKP 654

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V TYNT+I G  N  ++S      + M + G QPN +T +T I G CK+     A  + 
Sbjct: 655 NVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLL 714

Query: 357 SEMKATN 363
            +M+  N
Sbjct: 715 RKMENDN 721



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 28/245 (11%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S + +L G+ D+   +   ++F+ I  S    D    +++++     +  K  +A D FC
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG--IYNIIIHGMCNASKVDDAWDLFC 516

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
            +   G  P +++ N  +  L     +  A   +++M  +  SPN  T N+++ A    G
Sbjct: 517 SLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEG 576

Query: 278 IIERAVEVFKNMESMGFI----------------------PSVTTYNTLISGHC---NKG 312
              ++ ++ + ++  GF                       P V T+ TL+   C   N  
Sbjct: 577 DATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           +      FKN M+  G +PNV+T+NT+I G      + +   +  +M      PN VT +
Sbjct: 637 VYDAPTLFKN-MKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKS 695

Query: 373 TLING 377
           T I+G
Sbjct: 696 TFISG 700



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  +A  +F EM  +   P ++ ++ L +   +    ++   L ++M   GI  ++ T +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I   C+  K   A   +  + K    P+  T+S LI G C+      A +L   M+  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P       L++  C N     A  ++  M+E    P+ +    +   +   G+  LA
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 528 MKLFRKMEIR 537
           M+L RKME R
Sbjct: 232 MELLRKMEER 241


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 167/345 (48%), Gaps = 1/345 (0%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP-NVYTLNMVMHAF 273
            F  +   G  P   + NK + + + +  +  A+G  + M R+   P N ++ N+V+   
Sbjct: 147 AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 206

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
            + G    AVEVF  M     +P+  TYNT+I GH   G L      ++ M  +G++PN 
Sbjct: 207 WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNA 266

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+N L+ G C+ G++ E + +  EM +  + P+  TY+ L +G  + G+S+   SL+ +
Sbjct: 267 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 326

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            L+NG+ +   T + L+ GLCK+GK   A  +++ L    LVP    Y+ LI G C    
Sbjct: 327 SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 386

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E AF  +  M     +P+   +  L++  C+ E    A ++L+EM +  + P     + 
Sbjct: 387 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 446

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           L       G+ E    +  +M+  GL P        +N   +NG+
Sbjct: 447 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 491



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 155/292 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  + +  +N ++   YT +++++  CK G +  A EV +++ + G +P+   YNTLI+G
Sbjct: 321 LSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 380

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C  G L  A      M+   I+P+ IT+N LI G CK  ++  A  +  EM+   V+P 
Sbjct: 381 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 440

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG+ G  E    +  EM  NG+K ++++Y +++   CK GK  +A  ++ 
Sbjct: 441 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 500

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    ++PNA  Y+A+I        +++AF L + M  +G  P+   + +L+   C   
Sbjct: 501 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 560

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               A E++  +    + PD++  + L S   + G  + A+ L ++M   G+
Sbjct: 561 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 157/322 (48%), Gaps = 3/322 (0%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L        K   A +    + + G +P     N  ++    +  ++ A   + +M+  
Sbjct: 341 ILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSR 400

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            I P+  T N +++  CK   I  A ++   M+  G  P+V T+NTLI  +   G L   
Sbjct: 401 HIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKC 460

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               + M++NG++PNV+++ +++  FCK GK+ EA  I  +M   +V PN   YN +I+ 
Sbjct: 461 FIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDA 520

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           Y + G ++    L E+M  NGI   I+TYN LI GLC + +  +A  ++  L  + L+P+
Sbjct: 521 YVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPD 580

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
           A +Y+ LI+  C R N ++A  L + M + G +     +  L+S             +  
Sbjct: 581 AVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQ 640

Query: 498 EMLEKCMAPDSI---ILSELYS 516
           +M++  + P +    I+ E YS
Sbjct: 641 KMMQNNVVPSNAIHNIMVEAYS 662



 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSY-------------- 186
           T SI+L+ L K+ K   +E +L+ ++++    +P++ ++++++  Y              
Sbjct: 338 TCSILLNGLCKDGKVSIAEEVLQSLVNAGL--VPTRVIYNTLINGYCQTGELEGAFSTFG 395

Query: 187 ----RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
               R      + ++ L       ++  NA D   +M+D G  P +E+ N  + +   + 
Sbjct: 396 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 455

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +++       EM+ N + PNV +   +++AFCK G I  AV +  +M     +P+   YN
Sbjct: 456 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 515

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I  +   G    A      M+ NGI P+++T+N LI G C + ++ EA  I + +   
Sbjct: 516 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 575

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ V+YNTLI+     GN +    L + M + GIK  + TY+ LI GL   G+  + 
Sbjct: 576 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEM 635

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            YL + + +N++VP+ + ++ ++       N  +A  L K M++
Sbjct: 636 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 147/331 (44%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A + F +M +   LP   + N  +   +    ++       +M  + + PN  T N+++
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLL 273

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
              C+ G +     +   M S   +P   TY+ L  G    G     +       KNG+ 
Sbjct: 274 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVT 333

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
               T + L+ G CK GK+  A  +   +    + P  V YNTLINGY Q G  E   S 
Sbjct: 334 IGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFST 393

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           + +M    IK D +TYNALI GLCK  +   A  L+ ++  N + P   T++ LI     
Sbjct: 394 FGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGR 453

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
               E+ F +   M  +G +PN   +  +++ FC+N     A  +L +M  K + P++ +
Sbjct: 454 TGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQV 513

Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            + +       G ++ A  L  KM+  G+ P
Sbjct: 514 YNAIIDAYVEHGPNDQAFILVEKMKSNGISP 544


>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 19/406 (4%)

Query: 101  STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
            S  +T   V  +L +   D+V +  FF WV T        +++ +++ IL K ++F    
Sbjct: 1447 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1506

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
             ++  +++                       S +    + +  A   ++  A D F +M 
Sbjct: 1507 GLINQMVEVGGL------------------MSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1548

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             +G +   ++ N  L +L     V  A G ++E+R   I P+  + N ++H +CK  +++
Sbjct: 1549 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR-GTIPPDENSFNTLVHGWCKARMLK 1607

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             A++  + M+  GF PSV TY +L+  +C +          + M K    PNV+T+  L+
Sbjct: 1608 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1667

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                K G+  EA   F ++K   V+P+   YN+LI   G+ G  E   S+ EEM   GI 
Sbjct: 1668 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1727

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++ T+N LI   C   + + A  L+  +++ S  P+  TY+ L+   C R+  +    L
Sbjct: 1728 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 1787

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
               M R    P+   + +L+S  C+N    ++   L EM+ K  AP
Sbjct: 1788 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 1833



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 1/347 (0%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +DL+       K+F        QM + G L  + +  K +  L  + R   A+  + +M 
Sbjct: 1489 YDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1548

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            R  +  +   +N+++   CK   ++RA  VF+ +      P   ++NTL+ G C   +L 
Sbjct: 1549 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLK 1607

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             A+     M+++G  P+V+T+ +L+  +C +        +  EM+     PNVVTY  L+
Sbjct: 1608 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1667

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            +  G+ G +      ++++  +G+  D   YN+LI  L + G+ + A  +V+++    + 
Sbjct: 1668 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1727

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            PN +T++ LI+  C    +E A +L   M    C P+   +  L+   C+ +       +
Sbjct: 1728 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 1787

Query: 496  LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +  M  K ++PD    + L S L   GK   +     +M  +G  PK
Sbjct: 1788 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPK 1834



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R C  + + + +L        + R A DTF ++++ G  P     N  +  L  + R++ 
Sbjct: 1654 RRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLED 1713

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            A    +EMR   I+PNV T N ++ A C     E A+++   ME     P + TY  L+ 
Sbjct: 1714 AYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLK 1773

Query: 307  GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
              C +  + + +     M +  I P+  T+  L+   C+ GK+ ++     EM +   +P
Sbjct: 1774 LCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 1833

Query: 367  NVVTYNTLI 375
               T++ ++
Sbjct: 1834 KQETFDLVM 1842



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 3/268 (1%)

Query: 293  GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
            G+     +Y+ ++          L     N M + G   +++T   ++       +  EA
Sbjct: 1481 GYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEA 1540

Query: 353  NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
               F +M    V  +    N L++   +  + +    +++E LR  I  D  ++N L+ G
Sbjct: 1541 IDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHG 1599

Query: 413  LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             CK    K+A   ++++ ++   P+  TY++L+   C+ K+ +  + L   M +  C PN
Sbjct: 1600 WCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPN 1659

Query: 473  KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
               + +LM    +      A +   ++ E  +APD+   + L   L   G+ E A  +  
Sbjct: 1660 VVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE 1719

Query: 533  KMEIRGLLPK--GFDKLRTINCAPENGE 558
            +M   G+ P    F+ L +  C     E
Sbjct: 1720 EMRTTGIAPNVTTFNTLISAACDHSQAE 1747



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 19/200 (9%)

Query: 142  THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY----SYRMCDSSPLV-- 195
            T++I++H L K  + + +       L  D     +  ++S++Y    + R+ D+  +V  
Sbjct: 1662 TYTILMHALGKAGRTREALDTFDK-LKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 1720

Query: 196  ------------FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        F+ L        +  NA     +M +    P I++    L      + 
Sbjct: 1721 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 1780

Query: 244  VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            V I L     M R  ISP+  T  +++   C+ G + ++    + M S GF P   T++ 
Sbjct: 1781 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDL 1840

Query: 304  LISGHCNKGLLSLAMKFKNL 323
            ++     + L S+  K + L
Sbjct: 1841 VMEKLEKRNLQSVYKKIQVL 1860


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 200/486 (41%), Gaps = 62/486 (12%)

Query: 93  DWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTK 152
           D  +L    T +TP+++   LL++  D   S+E F W  T K      + + +++  L  
Sbjct: 65  DLPELRTSLTRITPYQLCK-LLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGA 123

Query: 153 NRKFKSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRK 207
             +FK+ +++L      GI+  +S                       +F L+ K Y    
Sbjct: 124 AGEFKTIDALLMQMKQEGIVFRES-----------------------LFILIMKHYGRAG 160

Query: 208 KFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
               AT     MR  Y   P   S N  L  LL      +    + EM    ISP VYT 
Sbjct: 161 LPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTF 220

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +VM A C +  ++ A  + K+M   G +P+   Y TLI      G ++  +K    M  
Sbjct: 221 GVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLL 280

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS--------------------- 365
            G  P+V TFN  I G CK  ++HEA ++   M     +                     
Sbjct: 281 MGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDE 340

Query: 366 ----------PNVVTYNTLINGYGQVGN-SEMGASLYEEMLRNGIKVDILTYNALILGLC 414
                     PNVV +NTLINGY   G   E  A ++E ML  G   DI TYN LILGLC
Sbjct: 341 ARMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLC 400

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K+G    A  L+ ++      PN  TY+ LI   C     E A  +   M   G   N  
Sbjct: 401 KKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAV 460

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  L+S  C++E    A  +  +M  K   PD    + L  GL    K E A+ L++ M
Sbjct: 461 GYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDM 520

Query: 535 EIRGLL 540
            + G++
Sbjct: 521 LLEGVI 526



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 178/399 (44%), Gaps = 69/399 (17%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G +P + + N  +  L    R+  A      M     +PN +T  ++MH  C++G ++ A
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA 341

Query: 283 -----------VEVF---------------------KNMESMGFIPSVTTYNTLISGHCN 310
                      V +F                     ++M S+G  P + TYNTLI G C 
Sbjct: 342 RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
           KG L  A +  N M+  G +PNVIT+  LI  FCK+G+L EA  +  EM    ++ N V 
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
           YN LI+   +    +   +++ +M   G K DI T+N+LI GLCK  K ++A  L +D+ 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 431 KNSLVPNASTYS-----------------------------------ALITGQCVRKNSE 455
              ++ N  TY+                                    LI   C   N E
Sbjct: 522 LEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIE 581

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
           +   L++ M+  G  PN     +L++  C+  +   A E L +M+ + + PD +  + L 
Sbjct: 582 KGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLI 641

Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKG--FDKLRTINC 552
           +GL   G+ + A+ LF K+++ G+ P    ++ L + +C
Sbjct: 642 NGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 680



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 149/300 (49%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ + + + +L   +    +   A +   +M   G        N  +S+L   E+V  AL
Sbjct: 420 CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDAL 479

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             + +M      P+++T N ++   CK+   E A+ ++++M   G I +  TYNTLI   
Sbjct: 480 NMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAF 539

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G +  A+K  N M   G   + IT+N LI   C+ G + +   +F +M +  ++PN 
Sbjct: 540 LRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNN 599

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           ++ N LING  + GN +       +M+  G+  DI+TYN+LI GLCK G+ ++A  L   
Sbjct: 600 ISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDK 659

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           L    + P+A TY+ LI+  C     + A  L    + SG  PN+  + +L+S F +  D
Sbjct: 660 LQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGD 719



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/352 (29%), Positives = 161/352 (45%), Gaps = 7/352 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQ-MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYK 252
           ++F+ L   Y  R +   A     + M   G  P I + N  +  L     +  A     
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EM+     PNV T  +++  FCK G +E A  V   M   G   +   YN LIS  C   
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
            +  A+     M   G +P++ TFN+LIFG CK  K  EA  ++ +M    V  N +TYN
Sbjct: 474 KVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYN 533

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TLI+ + + G  +    L  +ML  G  +D +TYN LI  LC+ G  +K   L +D+   
Sbjct: 534 TLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSK 593

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L PN  + + LI G C   N + A +  + MI  G  P+   +  L++  C+      A
Sbjct: 594 GLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEA 653

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGK---DELAMKLFRKMEIRGLLP 541
             +  ++  + + PD+I  + L S   HC +   D+  + L R ++  G +P
Sbjct: 654 LNLFDKLQVEGICPDAITYNTLIS--WHCKEGMFDDAHLLLSRGVD-SGFIP 702



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 154/338 (45%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C      ++ L      +    +A +   +M+  G  P + +    +       R++ A 
Sbjct: 385 CGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEAR 444

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    ++ N    N ++ A CK   ++ A+ +F +M S G  P + T+N+LI G 
Sbjct: 445 NVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGL 504

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C       A+     M   G+  N IT+NTLI  F ++G + EA ++ ++M       + 
Sbjct: 505 CKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDD 564

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           +TYN LI    + GN E G +L+E+M+  G+  + ++ N LI GLC+ G  + A   ++D
Sbjct: 565 ITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRD 624

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           +    L P+  TY++LI G C    ++ A  L+  +   G  P+   +  L+S  C+   
Sbjct: 625 MIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGM 684

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL 526
           FD A  +L   ++    P+ +    L S     G  E 
Sbjct: 685 FDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 722


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 185/380 (48%), Gaps = 3/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++G  +  + +  S++ + IL S+   D     ++ +   +    +   AT    +M+ 
Sbjct: 109 LIKGFFNFKNIEKASRVME-ILESHTEPDV--FAYNAVISGFCKVNRIEAATQVLNRMKA 165

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            GFLP I + N  + SL +  ++ +AL    ++  +   P V T  +++ A    G I  
Sbjct: 166 RGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINE 225

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A+++ + M + G +P + TYN +I G C +G++  A +    +   G +P+VI++N L+ 
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLR 285

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            F  +GK  E  ++ +EM +    PN VTY+ LI+   + G  +   S+ + M+   +  
Sbjct: 286 AFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 345

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D  +Y+ LI  LCKEG+   A  ++  +  N  +P+   Y+ ++   C   N+ +A +++
Sbjct: 346 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 405

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             +   GC PN   +  ++S      D  RA  ++  M+ K + PD I  + L S L   
Sbjct: 406 NKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRD 465

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G  E A+ L   ME  G  P
Sbjct: 466 GLVEEAIGLLDDMEQSGFRP 485



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 142/285 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ + +          A +    +   G  P + S N  L + L+  + D       EM 
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PN  T ++++ + C+ G I+ A+ V K M      P   +Y+ LIS  C +G L 
Sbjct: 305 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 364

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           LA+   + M  NG  P+++ +NT++   CK G  ++A  IF++++     PNV +YNT+I
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +     G+      +   M+  G+  D +TYN+LI  LC++G  ++A  L+ D++++   
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
           P   +Y+ ++ G C  +  + A  ++  MI  GCRPN+  + +L+
Sbjct: 485 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLI 529



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/375 (24%), Positives = 167/375 (44%), Gaps = 36/375 (9%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P +  C K +    + + ++ A     E+  +   P+V+  N V+  FCK+  IE A
Sbjct: 98  GYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESHTEPDVFAYNAVISGFCKVNRIEAA 156

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA------------------------- 317
            +V   M++ GF+P + TYN +I   CN+  L LA                         
Sbjct: 157 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEA 216

Query: 318 ----------MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                     MK    M   G+ P++ T+N +I G CK+G +  A  + + + +    P+
Sbjct: 217 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPD 276

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V++YN L+  +   G  + G  L  EM   G + + +TY+ LI  LC+ G+  +A  ++K
Sbjct: 277 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLK 336

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + +  L P+  +Y  LI+  C     + A  +   MI +GC P+   +  +++  C+N 
Sbjct: 337 VMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNG 396

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           + ++A E+  ++      P+    + + S L  CG    A+ +   M  +G+ P      
Sbjct: 397 NANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYN 456

Query: 548 RTINCAPENGEKESG 562
             I+C   +G  E  
Sbjct: 457 SLISCLCRDGLVEEA 471



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 167/348 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + ++++  +  +R+K   A     Q+     +P + +    + + +    ++ A+   +E
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    + P++YT N ++   CK G++ERA E+  ++ S G  P V +YN L+    N+G 
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
                K    M   G +PN +T++ LI   C+ G++ EA  +   M    ++P+  +Y+ 
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   + G  ++   + + M+ NG   DI+ YN ++  LCK G   +A  +   L    
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN S+Y+ +I+      +  RA  +  +MI  G  P++  +  L+S  C++   + A 
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L +M +    P  I  + +  GL    + + A+ +F +M  +G  P
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRP 520



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 141/337 (41%), Gaps = 56/337 (16%)

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVT---------------------------------- 299
           CK G    ++   + + + G+ P V                                   
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVF 138

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
            YN +ISG C    +  A +  N M+  G  P+++T+N +I   C + KL  A ++  ++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
              N  P V+TY  LI      G       L EEML  G+  D+ TYNA+I G+CKEG  
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           ++AA L+  L      P+  +Y+ L+     +   +   +L   M   GC PNK  + +L
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +S+ C+    D A  VL  M+EK + PD+     L S L   G+ +LA+ +   M   G 
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 540 LP----------------------KGFDKLRTINCAP 554
           LP                      + F+KLR + C P
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 415



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 149/304 (49%), Gaps = 2/304 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+RG+      +  ++L  S+  + + C    + +++L + + ++ K+        +M 
Sbjct: 247 AIIRGMCKEGMVERAAELITSL--TSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   + +  +SSL    R+D A+   K M    ++P+ Y+ + ++ A CK G ++
Sbjct: 305 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLD 364

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+ +   M S G +P +  YNT+++  C  G  + A++  N +   G  PNV ++NT+I
Sbjct: 365 LAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMI 424

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                 G    A  +   M +  V P+ +TYN+LI+   + G  E    L ++M ++G +
Sbjct: 425 SALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFR 484

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             +++YN ++LGLCK  +   A  +  ++ +    PN +TY  LI G         A +L
Sbjct: 485 PTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544

Query: 461 YKSM 464
             S+
Sbjct: 545 ANSL 548


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 204/433 (47%), Gaps = 19/433 (4%)

Query: 123 SLEFFTWVQTHKPSSLT--LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFD 180
           +L+ FT V    P++ T  L  +S V+H LT  + + ++  + + ++ +       +  +
Sbjct: 43  ALDTFTSVLKQNPNNPTKKLHLYSAVIHYLTGAKVYPTARCLTKDLIQTLLQSCTPRRVN 102

Query: 181 SILYS----YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
           S++++     R    +P VF +L   ++       A   + ++   G  P +++CN  L+
Sbjct: 103 SLVFNALSQLRGSKFNPSVFGVLIIAFSEVGLVDEALRVYLKV---GAFPAVQACNALLN 159

Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
            LL     DI    Y  M   R+ P V T N+++ A C+ G + RA  +   M   G  P
Sbjct: 160 GLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEP 219

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
           +V  Y TLI G C++  L  A      M+ +G+ PN+ T+N L+ G+CK   + +A  ++
Sbjct: 220 TVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLY 279

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
             M    + PNVVT+  LI+   +V         + +M + G+  +++ +N+LI G  K 
Sbjct: 280 QGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKA 339

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G   +A  L+ +++K  + P+  TYS LI   C     E A  + K M + G   N  ++
Sbjct: 340 GNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVY 399

Query: 477 EMLMSTFCQNEDFDRAAEV------LLEMLEKCMAPDSIILSELYSGLHHCGKDELA--M 528
             L+  +C+  + ++A E+        +M    + PD++  + +  G  H     +A  M
Sbjct: 400 NSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQG--HLNAKHMADVM 457

Query: 529 KLFRKMEIRGLLP 541
            L   M   G++P
Sbjct: 458 MLHADMIKMGIVP 470



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 173/353 (49%), Gaps = 8/353 (2%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           ++  ++L G+L   SFD+  +L+++++   R    + + +++L      +     A    
Sbjct: 152 QACNALLNGLLKKSSFDIMWELYNNMVS--RRLFPTVVTYNVLVDACCRQGDVLRAKSLI 209

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P +      +  L    ++  A   +++M+ + + PN+YT N++M  +CK 
Sbjct: 210 SEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKT 269

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
             +++A+ +++ M   G  P+V T+  LI   C    L  A +F   M K G+ PNV+ F
Sbjct: 270 ANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVF 329

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N+LI G+ K G   EA  +  EM+   +SP+V TY+ LI    ++G  E    + + M +
Sbjct: 330 NSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEK 389

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVK------DLDKNSLVPNASTYSALITGQCV 450
            G+  + + YN+LI G CKEG  +KA  + K      D+ +N L P+A  Y+ ++ G   
Sbjct: 390 EGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHLN 449

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
            K+      L+  MI+ G  PN+   +++   +  N     A     ++ E C
Sbjct: 450 AKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTESC 502



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 119/251 (47%), Gaps = 5/251 (1%)

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
           F PSV  +  LI      GL+  A++   +  K G  P V   N L+ G  KK       
Sbjct: 117 FNPSV--FGVLIIAFSEVGLVDEALR---VYLKVGAFPAVQACNALLNGLLKKSSFDIMW 171

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +++ M +  + P VVTYN L++   + G+     SL  EM++ GI+  ++ Y  LI GL
Sbjct: 172 ELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGL 231

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C E K  +A  + + +  + + PN  TY+ L+ G C   N ++A  LY+ M+  G +PN 
Sbjct: 232 CSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNV 291

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             F +L+   C+  +   A    ++M +  + P+ ++ + L  G    G    A  L  +
Sbjct: 292 VTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLE 351

Query: 534 MEIRGLLPKGF 544
           ME   + P  F
Sbjct: 352 MEKFKISPDVF 362


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/499 (24%), Positives = 215/499 (43%), Gaps = 68/499 (13%)

Query: 86  YSHLIHSDWKKLTALSTHLTP---FRVKHVL-----------LKVQKDYVLSLEFFTWVQ 131
           + H +  +  +L  LS+   P    R++H+L           L+ Q D  ++L FF W  
Sbjct: 128 FRHPVVREVCRLITLSSAWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERVALNFFYWAD 187

Query: 132 THKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS 191
                S     +  +L +L+K +  + +  +LR                  L + R  + 
Sbjct: 188 RQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLR------------------LMTRRGIEL 229

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  F  +  +Y+   K RNA      M+  G  P +  CN  +  L+   +++ AL F 
Sbjct: 230 SPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFL 289

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-------------MGF---- 294
           + M+   I P++ T N ++  +C L  IE A+E+   + S             MGF    
Sbjct: 290 ERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKE 349

Query: 295 -------------------IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
                              IP   TYNTLI      G    A+ F    E  G   + + 
Sbjct: 350 KKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVG 409

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           ++ ++  FC+KG++ EA  +  +M + + +P+VVTY  +++G+ ++G  +    + ++M 
Sbjct: 410 YSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMY 469

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           ++G K + ++Y AL+ GLC  GK+ +A  ++   +++   PNA TY  ++ G        
Sbjct: 470 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLS 529

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
            A  L + M+  G  P      +L+ + CQN+    A + L E L K  A + +  + + 
Sbjct: 530 EACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVI 589

Query: 516 SGLHHCGKDELAMKLFRKM 534
            G    G  E A+ +   M
Sbjct: 590 HGFCQIGDMEAALSVLEDM 608



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 142/320 (44%), Gaps = 2/320 (0%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           ++D   +P   + N  +  L      D AL F KE        +    + ++H+FC+ G 
Sbjct: 363 VQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGR 422

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           ++ A  +  +M S    P V TY  ++ G C  G +  A K    M K+G +PN +++  
Sbjct: 423 MDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTA 482

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G C  GK  EA  + +  +    +PN +TY  +++G+ + G       L  EM+  G
Sbjct: 483 LLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKG 542

Query: 399 IKVDILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
                +  N LI  LC+  K  +A  YL + L+K   + N   ++ +I G C   + E A
Sbjct: 543 FFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAI-NVVNFTTVIHGFCQIGDMEAA 601

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
             + + M  S   P+   +  L     +    D AAE++++ML K + P  +    +   
Sbjct: 602 LSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHR 661

Query: 518 LHHCGKDELAMKLFRKMEIR 537
               G+ +  + L  +M  R
Sbjct: 662 YCQWGRVDDMLNLLDRMVKR 681



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 141/301 (46%), Gaps = 2/301 (0%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ERV +   FY   R+ R S +      ++    K  + + A  V + M   G   S   +
Sbjct: 176 ERVALNF-FYWADRQWRYSHHPLVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAF 234

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             ++  +   G L  A++   LM+K G++PN+   NT I+   K  KL +A R    M+ 
Sbjct: 235 GCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQV 294

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
           T + P++VTYN+LI GY  +   E    L   +   G   D ++Y  ++  LCKE K ++
Sbjct: 295 TGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQ 354

Query: 422 AAYLVKDLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
              L++ + ++S L+P+  TY+ LI       +++ A    K     G   +K  +  ++
Sbjct: 355 VKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIV 414

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
            +FCQ    D A  ++++M  +   PD +  + +  G    G+ + A K+ ++M   G  
Sbjct: 415 HSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCK 474

Query: 541 P 541
           P
Sbjct: 475 P 475



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 7/353 (1%)

Query: 187 RMCDSSPLVFD-LLFKTYAHR-KKFRNATDTFC---QMRDYGFLPIIESCNKFLSSLLDS 241
           +M   S L+ D + + T  H   K  +A D      +  D GF       +  + S    
Sbjct: 361 KMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQK 420

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
            R+D A     +M     +P+V T   ++  FC+LG I+ A ++ + M   G  P+  +Y
Sbjct: 421 GRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSY 480

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             L++G C+ G    A +  N+ E++   PN IT+  ++ GF ++GKL EA  +  EM  
Sbjct: 481 TALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVE 540

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               P  V  N LI    Q           EE L  G  ++++ +  +I G C+ G  + 
Sbjct: 541 KGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEA 600

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  +++D+  ++  P+A TY+AL      +   + A +L   M+  G  P    F  ++ 
Sbjct: 601 ALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIH 660

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +CQ    D    +L  M+++   P   I + +   L   G  E A KL  K+
Sbjct: 661 RYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKV 711



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 179/419 (42%), Gaps = 21/419 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
           T++ ++H+L+K+     + + L+   D   F +    + +I++S+    RM ++  LV D
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDK-GFHIDKVGYSAIVHSFCQKGRMDEAKSLVID 432

Query: 198 LLFKTY-AHRKKFRNATDTFC-------------QMRDYGFLPIIESCNKFLSSLLDSER 243
           +  ++       +    D FC             QM  +G  P   S    L+ L  S +
Sbjct: 433 MYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGK 492

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A         +  +PN  T  +VMH F + G +  A ++ + M   GF P+    N 
Sbjct: 493 SLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINL 552

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   C    +  A K+       G   NV+ F T+I GFC+ G +  A  +  +M  +N
Sbjct: 553 LIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSN 612

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             P+ VTY  L +  G+ G  +  A L  +ML  G+    +T+ ++I   C+ G+     
Sbjct: 613 KHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDML 672

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L+  + K    P  + Y+ +I   C   N E A +L   ++R+  + + +   +LM + 
Sbjct: 673 NLLDRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESC 730

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +      A +V  +M  + + PD  +  ++   L   G    A KL  +   RG+  K
Sbjct: 731 LKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGIQQK 789


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 143/262 (54%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               ++EMRR  + PN+YT N ++  +C+ G  ERA  +F  M   G + +V +YNTLI+
Sbjct: 92  GFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIA 151

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A K  ++M   G +P++ITFN L+ G+ K GK+  A   F++MKA    P
Sbjct: 152 GLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYN LI G+ +  +         +M   G++   +TY  LI    +E    KA  ++
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL 271

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             ++K  L  +A TY  L+   C+  N + A +L++SM   G  P+  I++M++  + + 
Sbjct: 272 AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGRE 331

Query: 487 EDFDRAAEVLLEMLEKCMAPDS 508
               +A ++++EM +K + P+S
Sbjct: 332 GSSYKALKLIMEMRQKGLIPNS 353



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +C   ++       V  A   + EM    ++PN  T   +MH +   G  E+   +F+
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P++ TYN LI   C  G    A    + M   GI  NV+++NTLI G C+ G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A ++   M+     P+++T+N L++GYG+ G        + +M   G +   +TYN
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G C+     +A   + D+ +  L P   TY+ LI       +  +AF++   M ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   + H + +L+   C   +   A ++   M EK + P ++I   +  G    G    A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337

Query: 528 MKLFRKMEIRGLLP 541
           +KL  +M  +GL+P
Sbjct: 338 LKLIMEMRQKGLIP 351



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 129/280 (46%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V     +++  CK G +  A  VF  M  +G  P+  TY  L+ G+   G         
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G++PN+ T+N LI  +C+ G+   A  +F EM    +  NVV+YNTLI G  + 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G     A L + M   G +  I+T+N L+ G  K GK   A      +      P+A TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C  ++  RA +    M   G  P K  + +L+ +F +     +A E+L  M +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  D+     L   L   G  + A KLF+ M  +G+ P
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEP 316



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 5/317 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +    +F  A   F +M   G +  + S N  ++ L    ++  A      MR
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P++ T N+++  + K G +  A+  F  M++ GF PS  TYN LI+G C    ++
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M++ G++P  +T+  LI  F ++  + +A  I + M+   +  +  TY  L+
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 GN +    L++ M   G++   + Y+ +I G  +EG + KA  L+ ++ +  L+
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSM--IRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           PN+++Y   I   C     + A  L   M  IRS      H   +   +  Q +D D+  
Sbjct: 351 PNSASYGLTIRVLCKDDKCQEAEALLDDMETIRS--FAGHHQNFIASKSDSQQKDEDKCT 408

Query: 494 EVLLE-MLEKCMAPDSI 509
           E  L+  + + +  DSI
Sbjct: 409 EHFLQNKVGQALESDSI 425



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 39/259 (15%)

Query: 176 SKLFDS--ILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
            KL+D+  +L   R   + P  + F+LL   Y    K  NA   F QM+  GF       
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGF------- 209

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
                                        P+  T NM++  FC+   + RA     +M+ 
Sbjct: 210 ----------------------------QPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  P+  TY  LI     +  +  A +    MEK G++ +  T+  L+   C +G + +
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A ++F  M    V P+ V Y+ +I GYG+ G+S     L  EM + G+  +  +Y   I 
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIR 361

Query: 412 GLCKEGKTKKAAYLVKDLD 430
            LCK+ K ++A  L+ D++
Sbjct: 362 VLCKDDKCQEAEALLDDME 380



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 394 MLRNGIK-----VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           ML  G K     +D+    AL+ G CK G   +A  +  ++    L PN  TY+AL+ G 
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                 E+ F L++ M R G  PN + +  L+  +C+  +F+RA  +  EM  + +  + 
Sbjct: 84  FTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNV 143

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  + L +GL   GK   A KL   M   G  P
Sbjct: 144 VSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)

Query: 343 FCKKGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            C  G +  A  + +   K+ + + +V     L+NG  + G+      +++EM   G+  
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +TY AL+ G    G+ +K   L +++ +  + PN  TY+ LI   C     ERA  L+
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G   N   +  L++  C++     AA++L  M  +   P  I  + L  G    
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A+  F +M+  G  P
Sbjct: 192 GKMSNALPFFNQMKAAGFQP 211


>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1833

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 185/406 (45%), Gaps = 19/406 (4%)

Query: 101  STHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSE 160
            S  +T   V  +L +   D+V +  FF WV T        +++ +++ IL K ++F    
Sbjct: 1406 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1465

Query: 161  SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
             ++  +++                       S +    + +  A   ++  A D F +M 
Sbjct: 1466 GLINQMVEVGGL------------------MSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1507

Query: 221  DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             +G +   ++ N  L +L     V  A G ++E+R   I P+  + N ++H +CK  +++
Sbjct: 1508 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELR-GTIPPDENSFNTLVHGWCKARMLK 1566

Query: 281  RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             A++  + M+  GF PSV TY +L+  +C +          + M K    PNV+T+  L+
Sbjct: 1567 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1626

Query: 341  FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
                K G+  EA   F ++K   V+P+   YN+LI   G+ G  E   S+ EEM   GI 
Sbjct: 1627 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1686

Query: 401  VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
             ++ T+N LI   C   + + A  L+  +++ S  P+  TY+ L+   C R+  +    L
Sbjct: 1687 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 1746

Query: 461  YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
               M R    P+   + +L+S  C+N    ++   L EM+ K  AP
Sbjct: 1747 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 1792



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 160/347 (46%), Gaps = 1/347 (0%)

Query: 196  FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            +DL+       K+F        QM + G L  + +  K +  L  + R   A+  + +M 
Sbjct: 1448 YDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKMD 1507

Query: 256  RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            R  +  +   +N+++   CK   ++RA  VF+ +      P   ++NTL+ G C   +L 
Sbjct: 1508 RFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGT-IPPDENSFNTLVHGWCKARMLK 1566

Query: 316  LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
             A+     M+++G  P+V+T+ +L+  +C +        +  EM+     PNVVTY  L+
Sbjct: 1567 EALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILM 1626

Query: 376  NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            +  G+ G +      ++++  +G+  D   YN+LI  L + G+ + A  +V+++    + 
Sbjct: 1627 HALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIA 1686

Query: 436  PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            PN +T++ LI+  C    +E A +L   M    C P+   +  L+   C+ +       +
Sbjct: 1687 PNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFL 1746

Query: 496  LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            +  M  K ++PD    + L S L   GK   +     +M  +G  PK
Sbjct: 1747 VCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPK 1793



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 86/189 (45%)

Query: 187  RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
            R C  + + + +L        + R A DTF ++++ G  P     N  +  L  + R++ 
Sbjct: 1613 RRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLED 1672

Query: 247  ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            A    +EMR   I+PNV T N ++ A C     E A+++   ME     P + TY  L+ 
Sbjct: 1673 AYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLK 1732

Query: 307  GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
              C +  + + +     M +  I P+  T+  L+   C+ GK+ ++     EM +   +P
Sbjct: 1733 LCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAP 1792

Query: 367  NVVTYNTLI 375
               T++ ++
Sbjct: 1793 KQETFDLVM 1801



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/268 (20%), Positives = 112/268 (41%), Gaps = 3/268 (1%)

Query: 293  GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
            G+     +Y+ ++          L     N M + G   +++T   ++       +  EA
Sbjct: 1440 GYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEA 1499

Query: 353  NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
               F +M    V  +    N L++   +  + +    +++E LR  I  D  ++N L+ G
Sbjct: 1500 IDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQE-LRGTIPPDENSFNTLVHG 1558

Query: 413  LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
             CK    K+A   ++++ ++   P+  TY++L+   C+ K+ +  + L   M +  C PN
Sbjct: 1559 WCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPN 1618

Query: 473  KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
               + +LM    +      A +   ++ E  +APD+   + L   L   G+ E A  +  
Sbjct: 1619 VVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVE 1678

Query: 533  KMEIRGLLPK--GFDKLRTINCAPENGE 558
            +M   G+ P    F+ L +  C     E
Sbjct: 1679 EMRTTGIAPNVTTFNTLISAACDHSQAE 1706



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 19/200 (9%)

Query: 142  THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY----SYRMCDSSPLV-- 195
            T++I++H L K  + + +       L  D     +  ++S++Y    + R+ D+  +V  
Sbjct: 1621 TYTILMHALGKAGRTREALDTFDK-LKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEE 1679

Query: 196  ------------FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
                        F+ L        +  NA     +M +    P I++    L      + 
Sbjct: 1680 MRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQW 1739

Query: 244  VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
            V I L     M R  ISP+  T  +++   C+ G + ++    + M S GF P   T++ 
Sbjct: 1740 VKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDL 1799

Query: 304  LISGHCNKGLLSLAMKFKNL 323
            ++     + L S+  K + L
Sbjct: 1800 VMEKLEKRNLQSVYKKIQVL 1819


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 176/365 (48%), Gaps = 36/365 (9%)

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI----SPNVYTLNMVMHAF 273
           +MR  G  P + + N  +S+L  + RV  A   +++M+ +       P+  T ++++  F
Sbjct: 232 RMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGF 291

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
           C  G ++ A  +   M   GF+  V +YN  +SG    G +  A +    M   GIQPN 
Sbjct: 292 CDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNS 351

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
            T+N ++ G CK+GK  +A R+ + +++  +SP+VVTY +L++ Y   GN      + +E
Sbjct: 352 YTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDE 411

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M + G   +  TYN L+  L + G+T +A  L++ +++     + +  + +I G C    
Sbjct: 412 MAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSR 471

Query: 454 SERAFQLYKSMIRSG-----------------------CRPNKHIFEMLMSTFCQNEDFD 490
            + A  +   M   G                       C P++  + +L+S  C+   FD
Sbjct: 472 LDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFD 531

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG---------LLP 541
            A + LLEM+ K ++PDS+I      G    GK  LA+K+ R ME +G         LL 
Sbjct: 532 EAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLI 591

Query: 542 KGFDK 546
           +GF++
Sbjct: 592 RGFEE 596



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 162/339 (47%), Gaps = 33/339 (9%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N+ + + L   R+D+    YK++  +   P+V+T N+++ A C  G +E A  VF  M +
Sbjct: 114 NRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPA 173

Query: 292 -------------------------MGFIPS--VTTYNTLISGHCNKGLLSLAMKFKNLM 324
                                    +  +PS  +   NT+++G C +GL+  A +    M
Sbjct: 174 RNEFSFGILARGYCRAGRSIDALKVLDGMPSMNLVVCNTVVAGFCKEGLVEEAERLVERM 233

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----SPNVVTYNTLINGYGQ 380
              G+ PNV+TFN  I   CK G++ +A RIF +M+         P+ VT++ +++G+  
Sbjct: 234 RVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCD 293

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +    L + M   G    + +YN  + GL + G+  +A  L++++    + PN+ T
Sbjct: 294 AGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYT 353

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGC-RPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           Y+ +++G C    +  A ++ ++ IRSG   P+   +  L+  +C   +   A  +L EM
Sbjct: 354 YNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEM 412

Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            +K  AP+S   + L   L   G+   A +L  +M  +G
Sbjct: 413 AQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 156/403 (38%), Gaps = 93/403 (23%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + FD++   +        A      MR  GFL  +ES N++LS L+ + RV  A    +E
Sbjct: 282 VTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLRE 341

Query: 254 MRRNRISPNVYTLNMV-----------------------------------MHAFCKLGI 278
           M    I PN YT N++                                   +HA+C  G 
Sbjct: 342 MAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGN 401

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTL---------------------------------- 304
           I  A  +   M   G  P+  TYN L                                  
Sbjct: 402 IAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNI 461

Query: 305 -ISGHCNKGLLSLAMKFKNLMEKNG-----------------------IQPNVITFNTLI 340
            I G C    L +AM   + M + G                         P+ IT++ LI
Sbjct: 462 IIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILI 521

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CK+G+  EA +   EM   ++SP+ V Y+T I+GY + G + +   +  +M + G  
Sbjct: 522 SALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCN 581

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
               TYN LI G  ++ K+++   L+ ++ +  + PN  TY++LI   C +    +A  L
Sbjct: 582 PSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPL 641

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
              M+++   PN   F++L+  +C+  DF  A  V    L  C
Sbjct: 642 LDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTC 684



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 23/250 (9%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   +++L ++     +   A     +M + G+      CN  +  L  + R+D+A+
Sbjct: 417 CAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAM 476

Query: 249 ----GFYKEMR-------------------RNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
               G ++E                       R  P+  T ++++ A CK G  + A + 
Sbjct: 477 DIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKK 536

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M      P    Y+T I G+C  G  SLA+K    MEK G  P+  T+N LI GF +
Sbjct: 537 LLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEE 596

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           K K  E  ++ SEMK   +SPNV+TYN+LI  + Q G       L +EML+N +  +I +
Sbjct: 597 KHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITS 656

Query: 406 YNALILGLCK 415
           ++ LI   CK
Sbjct: 657 FDLLIKAYCK 666



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 127/271 (46%), Gaps = 18/271 (6%)

Query: 282 AVEVFKNMESMGFIPSVTT--YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           A+  F+++ ++   P  TT  YN LI     +  L L       +  +G QP+V T N L
Sbjct: 92  AIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLL 151

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +   C  G++  A R+F  M A     N  ++  L  GY + G S     + + M     
Sbjct: 152 LQALCDAGRMELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGM----P 203

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
            ++++  N ++ G CKEG  ++A  LV+ +    L PN  T++A I+  C       A++
Sbjct: 204 SMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYR 263

Query: 460 LYKSMIRSGC----RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS--E 513
           +++ M         RP++  F++++S FC +  F   A VL++++ +C      + S   
Sbjct: 264 IFQDMQEDWQHGLPRPDQVTFDVMLSGFC-DAGFVDEARVLVDIM-RCGGFLRRVESYNR 321

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
             SGL   G+   A +L R+M   G+ P  +
Sbjct: 322 WLSGLVRNGRVGEAQELLREMAHEGIQPNSY 352


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 205/471 (43%), Gaps = 57/471 (12%)

Query: 96  KLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
           +L  L   L P +V  VL ++Q D  ++L FF W             +  +L IL+K + 
Sbjct: 91  ELRHLLRSLKPRQVCAVL-QLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKTKL 149

Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
            + ++ +LR                  L + R  +  P  F  +  +Y+   K RNA   
Sbjct: 150 CQGAKRVLR------------------LMAKRRIERRPEAFGYVMVSYSRAGKLRNAMRV 191

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
              M+  G  P +  CN  +  L+   R+D A+ F + M+   I PNV T N ++  +C 
Sbjct: 192 LTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYCD 251

Query: 276 LGIIERAVEVFKNM-------------ESMGFI-----------------------PSVT 299
           L  +E A+E+   M               MGF+                       P   
Sbjct: 252 LHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQV 311

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TYNT +      G    A++F    E+   + + + ++ ++  FC++G++ +A  I +EM
Sbjct: 312 TYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEM 371

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
            +    P+VVTY ++ING  Q    +    +  +M ++G K + ++Y AL+ GLCK G +
Sbjct: 372 FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNS 431

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
            +A  ++   +++  +PNA TYS L+ G      S  A  L + MI+ G  P      +L
Sbjct: 432 LEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLL 491

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
           + + CQ E  D A   + + L    A + +  + +  G   C KD+L   L
Sbjct: 492 IQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF--CQKDDLEAAL 540



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 146/316 (46%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           ++D   LP   + N F+  L      D AL F +E    R   +    + ++H+FC+ G 
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +++A E+   M S G IP V TY ++I+G C +  +  A K    M K+G +PN +++  
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+ G CK G   EA  + +  +     PN +TY+ L++G+ + G S     L  EM++ G
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                +  N LI  LC+E K  +A   ++    N    N   ++ +I G C + + E A 
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
            L   M  S   P+   +  ++    +    + A ++ ++ML   + P  +    +    
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 600

Query: 519 HHCGKDELAMKLFRKM 534
              G+ E  +KL  KM
Sbjct: 601 CRMGRVEDLLKLLEKM 616



 Score =  111 bits (278), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 145/323 (44%), Gaps = 4/323 (1%)

Query: 237 SLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
            L   ERV +   ++ + + R R  P VY    ++    K  + + A  V + M      
Sbjct: 109 QLQTDERVALRFFYWADRQWRYRHDPIVYY--AMLEILSKTKLCQGAKRVLRLMAKRRIE 166

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
                +  ++  +   G L  AM+   +M+K GI+P++   NT I       +L +A R 
Sbjct: 167 RRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 226

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
              M+   + PNV+TYN LI GY  +   E    L  EM   G   D ++Y  ++  LCK
Sbjct: 227 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 286

Query: 416 EGKTKKAAYLVKDLDKNS-LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           E + K+   L++ + K+S L+P+  TY+  +       + + A +  +       R +K 
Sbjct: 287 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            +  ++ +FC+    D+A E++ EM  K   PD +  + + +GL    K + A K+ R+M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406

Query: 535 EIRGLLPKGFDKLRTINCAPENG 557
              G  P        +N   +NG
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNG 429



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 141/314 (44%), Gaps = 4/314 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +  ++    +   A +   +M   G +P + +    ++ L    +VD A    ++M 
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++   PN  +   +++  CK G    A E+    E   +IP+  TY+ L+ G   +G  S
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 467

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M K G  P  +  N LI   C++ K+ EA R   +      + NVV + T+I
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +G+ Q  + E   SL ++M  +    D++TY  +I  L K+G+ ++A  L   + +  L+
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI 587

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMI-RSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P   TY  +I   C     E   +L + M+ R  CR     +  ++   C   + ++A +
Sbjct: 588 PTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRT---AYNQVIEKLCSFGNLEQAYK 644

Query: 495 VLLEMLEKCMAPDS 508
           +L ++L      D+
Sbjct: 645 LLGKVLRTASKIDA 658



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 97/219 (44%), Gaps = 2/219 (0%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           + + + +L   +    K   A D   +M   GF P     N  + SL   E+VD A  F 
Sbjct: 449 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           ++   N  + NV     V+H FC+   +E A+ +  +M      P V TY T+I     K
Sbjct: 509 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 568

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G +  A K    M + G+ P  +T+ T+I  +C+ G++ +  ++  +M +         Y
Sbjct: 569 GRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECR--TAY 626

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
           N +I      GN E    L  ++LR   K+D  T + LI
Sbjct: 627 NQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLI 665



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 87/355 (24%), Positives = 144/355 (40%), Gaps = 52/355 (14%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPLVFD 197
           T++  +H+L+K+     +   LR   +   F +    + +I++S+    RM  +  +V +
Sbjct: 312 TYNTFVHMLSKHGHGDEALEFLREA-EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNE 370

Query: 198 LLFK-------TY-------AHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
           +  K       TY          +K   A     QM  +G  P   S    L+ L  +  
Sbjct: 371 MFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGN 430

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
              A         +   PN  T +++MH F + G    A ++ + M   GF P+    N 
Sbjct: 431 SLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINL 490

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI   C +  +  A +F      NG   NV+ F T+I GFC+K  L  A  +  +M  +N
Sbjct: 491 LIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSN 550

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI------------------KVDIL- 404
             P+VVTY T+I+  G+ G  E    L  +MLR G+                  +V+ L 
Sbjct: 551 KHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLL 610

Query: 405 --------------TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
                          YN +I  LC  G  ++A  L+  + + +   +A+T   LI
Sbjct: 611 KLLEKMLSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLI 665


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 191/423 (45%), Gaps = 70/423 (16%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A D F  M     LP +   ++  S++  +++ D+ L   K+M    I+ N+YTL+
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 268 MVMHAFCKL-----------------------------------GIIERAVEVFKNMESM 292
           ++++ FC+                                    G +  A+E+   M  M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF---------------- 336
           G  P + T NTL++G C  G  + AM   + M + G QPN +T+                
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 337 -------------------NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
                              + +I G CK G L  A  +F+EM+   ++ N++TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
           +   G  + GA L  +M++  I  +++T++ LI    KEGK ++A  L K++    + P+
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
             TY++LI G C   + ++A Q+   M+  GC PN   F +L++ +C+    D   E+  
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +M  + +  D++  + L  G    GK  +A +LF++M  R + P        ++   +NG
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 558 EKE 560
           E E
Sbjct: 488 ESE 490



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A +   +M + G  P + + N  ++ L  S +   A+    +
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T   V++  CK G    A+E+ + ME          Y+ +I G C  G 
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N ME  GI  N+IT+N LI GFC  G+  +  ++  +M    ++PNVVT++ 
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       L++EM+  GI  D +TY +LI G CKE    KA  +V  +    
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  T++ LI G C     +   +L++ M   G   +   +  L+  FC+    + A 
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + P+ +    L  GL   G+ E A+++F K+E
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 155/313 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++           NA + F +M   G    I + N  +    ++ R D      ++M 
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + +I+PNV T ++++ +F K G +  A E+ K M   G  P   TY +LI G C +  L 
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  +LM   G  PN+ TFN LI G+CK  ++ +   +F +M    V  + VTYNTLI
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            G+ ++G   +   L++EM+   +  +I+TY  L+ GLC  G+++KA  + + ++K+ + 
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKME 505

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +   Y+ +I G C     + A+ L+ S+   G +P    + +++   C+      A  +
Sbjct: 506 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565

Query: 496 LLEMLEKCMAPDS 508
             +M E   APD 
Sbjct: 566 FRKMEEDGHAPDG 578



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 149/301 (49%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A   + EM    I+ N+ T N+++  FC  G  +   ++ ++M      P+V T++ 
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI     +G L  A +    M   GI P+ IT+ +LI GFCK+  L +AN++   M +  
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
             PN+ T+N LINGY +    + G  L+ +M   G+  D +TYN LI G C+ GK   A 
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            L +++    + PN  TY  L+ G C    SE+A ++++ + +S    +  I+ +++   
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           C     D A ++   +  K + P     + +  GL   G    A  LFRKME  G  P G
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578

Query: 544 F 544
           +
Sbjct: 579 W 579



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 159/342 (46%), Gaps = 9/342 (2%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           +E   I  +I+T N        ++ G  ++  +D  +KL   ++   R  + + + F +L
Sbjct: 289 MEMKGITTNIITYN-------ILIGGFCNAGRWDDGAKLLRDMIK--RKINPNVVTFSVL 339

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
             ++    K R A +   +M   G  P   +    +        +D A      M     
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            PN+ T N++++ +CK   I+  +E+F+ M   G +    TYNTLI G C  G L++A +
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
               M    + PN++T+  L+ G C  G+  +A  IF +++ + +  ++  YN +I+G  
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
                +    L+  +   G+K  + TYN +I GLCK+G   +A  L + ++++   P+  
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           TY+ LI       ++ ++ +L + + R G   +    +M++ 
Sbjct: 580 TYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/309 (27%), Positives = 154/309 (49%), Gaps = 1/309 (0%)

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
           +  S L+D  + D A+  +++M  +R  P V   + +  A  K    +  + + K ME  
Sbjct: 59  RLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 117

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G   ++ T + +I+  C    L LA      + K G +PN ITF+TLI G C +G++ EA
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 177

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             +   M      P+++T NTL+NG    G       L ++M+  G + + +TY  ++  
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNV 237

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           +CK G+T  A  L++ +++ ++  +A  YS +I G C   + + AF L+  M   G   N
Sbjct: 238 MCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTN 297

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +L+  FC    +D  A++L +M+++ + P+ +  S L       GK   A +L +
Sbjct: 298 IITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHK 357

Query: 533 KMEIRGLLP 541
           +M  RG+ P
Sbjct: 358 EMIHRGIAP 366


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 160/329 (48%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           R A +   +M      P +   N  +  L     V  A   Y ++    I P+V+T   +
Sbjct: 200 REAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCL 259

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +H FC LG       +  +M       +V TYN LI   C KG+L  A   +NLM + G 
Sbjct: 260 IHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQ 319

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+++TFNTL+ G+C    + EA ++F       ++P+V +YN LI GY +    +   S
Sbjct: 320 RPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALS 379

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ +M    +  +I+TY++LI GLCK G+   A  L   +      PN  TY+ ++   C
Sbjct: 380 LFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALC 439

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +  ++A +L+  M   G  PN   + +L++ +C+++  D A  +  EM  + + PDS+
Sbjct: 440 KIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSV 499

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             + L  GL   G+   A +LF  M   G
Sbjct: 500 TYNCLIDGLCKSGRISHAWELFNVMHDGG 528



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/319 (29%), Positives = 154/319 (48%), Gaps = 5/319 (1%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A     +M    + PNV   NM++   CK G++  A +++ ++   G  P V TY  LI 
Sbjct: 202 AFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIH 261

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G      +    M    +  NV T+N LI   CKKG L +A+ + + M      P
Sbjct: 262 GFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRP 321

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           ++VT+NTL++GY    +      L++     GI  D+ +YN LI+G CK  +  +A  L 
Sbjct: 322 DLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLF 381

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             ++   L PN  TYS+LI G C       A++L+ ++   G  PN   + +++   C+ 
Sbjct: 382 NKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKI 441

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
           +  D+A E+   M E+ + P+    + L +G     + + AM LF +M  R L+P     
Sbjct: 442 QLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSV-- 499

Query: 547 LRTINCAPENGEKESGGLS 565
             T NC  + G  +SG +S
Sbjct: 500 --TYNCLID-GLCKSGRIS 515



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 175/372 (47%), Gaps = 2/372 (0%)

Query: 170 DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
           D+ D    LF  ++  + +   S + F+++  +    K +  A     QM   G  P I 
Sbjct: 57  DAIDDAVALFTRLITMHPL--PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIV 114

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           + +  ++       +  A      + +     N  TL  +M   C  G + +A+E   ++
Sbjct: 115 TLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSV 174

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            + GF+    TY TLI+G C  GL   A +  + ME   ++PNV+ +N ++ G CK G +
Sbjct: 175 VAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLV 234

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  ++S++    + P+V TY  LI+G+  +G       L  +M+   + +++ TYN L
Sbjct: 235 TEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNIL 294

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I  LCK+G   KA  +   + +    P+  T++ L++G C+  +   A +L+ +    G 
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
            P+   + +L+  +C+N   D A  +  +M  K +AP+ +  S L  GL   G+   A +
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414

Query: 530 LFRKMEIRGLLP 541
           LF  +   G  P
Sbjct: 415 LFSAIHDGGPSP 426



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 77/297 (25%), Positives = 135/297 (45%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  D     +  L   +    ++R  T   C M D      + + N  + +L     +  
Sbjct: 247 RGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGK 306

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A      M      P++ T N +M  +C    +  A ++F      G  P V +YN LI 
Sbjct: 307 AHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILII 366

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C    +  A+   N M    + PN++T+++LI G CK G++  A  +FS +     SP
Sbjct: 367 GYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSP 426

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           NV+TYN +++   ++   +    L+  M   G+  ++ +YN LI G CK  +  +A  L 
Sbjct: 427 NVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLF 486

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           +++ + +LVP++ TY+ LI G C       A++L+  M   G   +   + +L   F
Sbjct: 487 EEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 6/207 (2%)

Query: 177 KLFDSILYSYRMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKF 234
           KLFD+    +  C  +P V  +++L   Y    +   A   F +M      P I + +  
Sbjct: 344 KLFDT----FAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSL 399

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  L  S R+  A   +  +     SPNV T N+++ A CK+ ++++A+E+F  M   G 
Sbjct: 400 IDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGL 459

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+V++YN LI+G+C    +  AM     M +  + P+ +T+N LI G CK G++  A  
Sbjct: 460 TPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWE 519

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQV 381
           +F+ M       +V+TYN L + + ++
Sbjct: 520 LFNVMHDGGPPVDVITYNILFDAFSKI 546


>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
 gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
          Length = 321

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 142/281 (50%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P V T  +++   CK   +  A E+ + M   G  P+   +N ++   C +G  + A  F
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAYGF 67

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M   G+ P ++T+N LI GFCK+ KLH A  I  EM      PN VTYNT ++G  +
Sbjct: 68  IETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCK 127

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +   +L+  M    I++D+  Y  LI GLC+ GK  +A  L+ +++ +  VP    
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+A+++  C       A +L+K M  SG  P+   F M++  +C+    D A  +L +M 
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +AP  +I + L   L+  G+   A +L ++M  RGL P
Sbjct: 248 SAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSP 288



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 136/290 (46%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + G +P + +    +  L  + R+  A    + M      PN    N +M A CK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGR 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
              A    + M SMG  P++ TYN LI G C +  L  A++    M   G +PN +T+NT
Sbjct: 61  SAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            + G CK GK+ +A  +F  M    +  +V  Y TLI+G  Q G      SL +EM  +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                  YNA++  LCK  +  +A  L K +  + ++P+  T+  ++ G C     + A 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            L + M  +G  P + I+  L+    +      A  +L EM+ + ++P+S
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNS 290



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 130/291 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + F +L        +  +A +    M + G  P     N  + +L    R   A 
Sbjct: 6   CIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCFPNALVFNGIMDALCKEGRSAEAY 65

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           GF + MR   +SP + T N+++  FCK   + RA+E+ + M   G  P+  TYNT + G 
Sbjct: 66  GFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A+     M +  I+ +V  + TLI G C+ GKL EA  +  EM+ +   P  
Sbjct: 126 CKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             YN +++   +         L++ M  +GI  D LT+  ++ G C+  +   A  L++ 
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +    L P    Y+ LI           A++L + MI  G  PN   + ++
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 6/274 (2%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           +D+F+L   + +      R C  + LVF+ +        +   A      MR  G  P I
Sbjct: 27  TDAFELVEVMGE------RGCFPNALVFNGIMDALCKEGRSAEAYGFIETMRSMGVSPTI 80

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            + N  +      E++  AL   +EM      PN  T N  +H  CK G ++ A+ +F+ 
Sbjct: 81  VTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRA 140

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M        V  Y TLI G C  G L+ A    + ME +G  P    +N ++   CK  +
Sbjct: 141 MTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSR 200

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           ++EA+++F  M  + + P+ +T+  ++ GY +    +    L ++M   G+    + YN 
Sbjct: 201 INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNT 260

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           LI  L + G+  +A  L++++    L PN+ TY+
Sbjct: 261 LIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYA 294


>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
          Length = 552

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/315 (27%), Positives = 159/315 (50%), Gaps = 1/315 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ + +        + A   F  M+  G +P   + N  +  LL   R   A+G  + M 
Sbjct: 156 FNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRME 215

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R  + P V T   V+    + G ++ A +V + ME  G   +   Y+T+I+G C  G + 
Sbjct: 216 REGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEID 275

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K    M  + ++PNV+ ++ +I G    GK+ EA  +F EM  +  +PN++TY ++I
Sbjct: 276 CALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMI 335

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
            GY ++G++    S++EEM+  G   + ++Y+ LI GLC  G+ K A  + K +      
Sbjct: 336 QGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCA 395

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSG-CRPNKHIFEMLMSTFCQNEDFDRAAE 494
           P+   Y+++I G CV    +   +L+  M+ SG   P+   + +L+      +D  RA +
Sbjct: 396 PDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMD 455

Query: 495 VLLEMLEKCMAPDSI 509
           +L  ML++   PD++
Sbjct: 456 LLNRMLDQGCDPDTV 470



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 158/304 (51%), Gaps = 1/304 (0%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +S+L D+ RVD A+    EM  + +       N V+ A  + G ++ A ++F+ M+  G 
Sbjct: 126 VSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGC 184

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P+  TYN L+ G    G    AM     ME+ G+ P V+T+  ++ G  + G++ +A +
Sbjct: 185 VPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWK 244

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  EM+   ++ N   Y+T+I G+ + G  +    ++E M+ + ++ +++ Y+A+I GL 
Sbjct: 245 VAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLA 304

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
             GK  +A  L +++  +   PN  TY ++I G     ++ RA  +++ MI +GC PN  
Sbjct: 305 NFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAV 364

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L++  C       A  V   ML++  APD+I  + +  GL   G  +  ++LF  M
Sbjct: 365 SYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDM 424

Query: 535 EIRG 538
              G
Sbjct: 425 LASG 428



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 150/314 (47%), Gaps = 1/314 (0%)

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
           E+ N  L ++L +  V  A   ++ M+     P   T N+++H     G    A+ V + 
Sbjct: 154 EAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRR 213

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ME  G +P V TY  ++ G    G +  A K    ME+NG+  N   ++T+I GFCK G+
Sbjct: 214 MEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGE 273

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A +++  M A+ V PNVV Y+ +I G    G       L+ EM+ +    +I+TY +
Sbjct: 274 IDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGS 333

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           +I G  K G T +A  + +++     +PNA +YS LI G C     + A  ++K M+  G
Sbjct: 334 MIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRG 393

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-PDSIILSELYSGLHHCGKDELA 527
           C P+   +  ++   C +   D    +  +ML    A PD I  + L  GL        A
Sbjct: 394 CAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRA 453

Query: 528 MKLFRKMEIRGLLP 541
           M L  +M  +G  P
Sbjct: 454 MDLLNRMLDQGCDP 467



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 2/299 (0%)

Query: 244 VDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +D+AL    E+     ++P+ +T + V+ A    G ++ AV +   M + G + +   +N
Sbjct: 99  LDVALRILHEIIPGWDLAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAEAFN 157

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            ++      G +  A K    M+  G  P   T+N L+ G    G+   A  +   M+  
Sbjct: 158 PVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMERE 217

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            V P V+TY  +++G  + G  +    + EEM RNG+  +   Y+ +I G CK G+   A
Sbjct: 218 GVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCA 277

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             + + +  + + PN   YSA+I G         A  L++ MI S C PN   +  ++  
Sbjct: 278 LKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQG 337

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           + +  D  RA  V  EM+     P+++  S L +GL + G+ + AM +++ M  RG  P
Sbjct: 338 YFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAP 396



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/300 (22%), Positives = 137/300 (45%), Gaps = 11/300 (3%)

Query: 252 KEMRR--NRISPNVYTLNMVMHAFCKLGI-------IERAVEVFKNM-ESMGFIPSVTTY 301
           + +RR   R++P + + N+++   C   +       ++ A+ +   +       P   TY
Sbjct: 63  RSLRRFPGRLAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTY 122

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
           +T++S   + G +  A+   + M  +G+      FN ++    + G +  A ++F  M+ 
Sbjct: 123 STVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAAKLFEFMQL 181

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
               P   TYN L++G    G +     +   M R G+   ++TY A++ GL + G+ K 
Sbjct: 182 KGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKD 241

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  + +++++N L  N   YS +ITG C     + A +++++M+ S  RPN  ++  ++ 
Sbjct: 242 AWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIG 301

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                     A  +  EM++   AP+ I    +  G    G    A+ ++ +M   G +P
Sbjct: 302 GLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMP 361



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/300 (20%), Positives = 121/300 (40%), Gaps = 20/300 (6%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   S   D   K++++++ S      + +++  +    A+  K   A   F +M 
Sbjct: 263 TVITGFCKSGEIDCALKVWEAMVASP--VRPNVVLYSAMIGGLANFGKMTEAELLFREMI 320

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D    P I +    +           AL  ++EM      PN  + +++++  C +G ++
Sbjct: 321 DSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLK 380

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTL 339
            A+ V+K+M   G  P    Y ++I G C  G++   ++ F +++      P+VI++N L
Sbjct: 381 DAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVL 440

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           + G      L  A  + + M      P+ VT N  +  +G       G     E L    
Sbjct: 441 LDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGA------GERKGREFL---- 490

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
                    L++ LC   +   A  ++  +    +VP A  +  ++   C RK   R   
Sbjct: 491 -------EGLVVRLCDRRRNMAAGEVLMVMLAKYIVPEAPIWEMVVRDVCRRKRVWRVID 543



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 53/242 (21%)

Query: 329 IQPNVITFNTLIFGFCK-------KGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQ 380
           + P +++FN L+   C        +  L  A RI  E+    +++P+  TY+T+++    
Sbjct: 72  LAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALAD 131

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +   +L  EM+ +G+ V    +N ++  + + G  K AA L + +     VP A+T
Sbjct: 132 AGRVDDAVALVHEMVADGV-VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAAT 190

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ L+ G  V   +  A  + + M R G                                
Sbjct: 191 YNVLVHGLLVCGRAGAAMGVMRRMEREG-------------------------------- 218

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTIN 551
              + P  +    +  GL  CG+ + A K+  +ME  GL         +  GF K   I+
Sbjct: 219 ---VVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEID 275

Query: 552 CA 553
           CA
Sbjct: 276 CA 277


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 168/345 (48%), Gaps = 1/345 (0%)

Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP-NVYTLNMVMHAF 273
            F  +   G  P   + NK + + + +  +  A+G  + M R+   P N ++ N+V+   
Sbjct: 14  AFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGM 73

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
            + G    AVEVF  M     +P+  TYNT+I GH   G L    + ++ M  +G++PN 
Sbjct: 74  WRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNA 133

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           IT+N L+ G C+ G++ E + +  EM +  + P+  TY+ L +G  + G+S+   SL+ +
Sbjct: 134 ITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 193

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
            L+NG+ +   T + L+ GLCK+GK   A  +++ L    LVP    Y+ LI G C    
Sbjct: 194 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 253

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
            E AF  +  M     +P+   +  L++  C+ E    A ++L+EM +  + P     + 
Sbjct: 254 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 313

Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           L       G+ E    +  +M+  GL P        +N   +NG+
Sbjct: 314 LIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGK 358



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 155/292 (53%)

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  + +  +N ++   YT +++++  CK G +  A EV +++ + G +P+   YNTLI+G
Sbjct: 188 LSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLING 247

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C  G L  A      M+   I+P+ IT+N LI G CK  ++  A  +  EM+   V+P 
Sbjct: 248 YCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPT 307

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V T+NTLI+ YG+ G  E    +  EM  NG+K ++++Y +++   CK GK  +A  ++ 
Sbjct: 308 VETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILD 367

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+    ++PNA  Y+A+I        +++AF L + M  +G  P+   + +L+   C   
Sbjct: 368 DMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQS 427

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               A E++  +    + PD++  + L S   + G  + A+ L ++M   G+
Sbjct: 428 QISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 160/323 (49%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +    + + G +P     N  ++    +  ++ A   + +M+   I P+  T N +++
Sbjct: 222 AEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALIN 281

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK   I  A ++   M+  G  P+V T+NTLI  +   G L       + M++NG++P
Sbjct: 282 GLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKP 341

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           NV+++ +++  FCK GK+ EA  I  +M   +V PN   YN +I+ Y + G ++    L 
Sbjct: 342 NVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILV 401

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           E+M  NGI   I+TYN LI GLC + +  +A  ++  L  + L+P+A +Y+ LI+  C R
Sbjct: 402 EKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYR 461

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
            N ++A  L + M + G +     +  L+S        +    +  +M++  + P + I 
Sbjct: 462 GNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 521

Query: 512 SELYSGLHHCGKDELAMKLFRKM 534
           + +       G +  A  L ++M
Sbjct: 522 NIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 169/344 (49%), Gaps = 21/344 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSK-LFDSILYSY-------------- 186
           T SI+L+ L K+ K   +E +L+ ++++    +P++ ++++++  Y              
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGL--VPTRVIYNTLINGYCQTGELEGAFSTFG 262

Query: 187 ----RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
               R      + ++ L       ++  NA D   +M+D G  P +E+ N  + +   + 
Sbjct: 263 QMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTG 322

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           +++       EM+ N + PNV +   +++AFCK G I  AV +  +M     +P+   YN
Sbjct: 323 QLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYN 382

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
            +I  +   G    A      M+ NGI P+++T+N LI G C + ++ EA  I + +   
Sbjct: 383 AIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 442

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+ V+YNTLI+     GN +    L + M + GIK  + TY+ LI GL   G+  + 
Sbjct: 443 RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEM 502

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
            YL + + +N++VP+ + ++ ++       N  +A  L K M++
Sbjct: 503 EYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 152/335 (45%), Gaps = 8/335 (2%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A + F +M +   LP   + N  +   +    ++       +M  + + PN  T N+++
Sbjct: 81  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLL 140

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG----LLSLAMKFKNLMEK 326
              C+ G +     +   M S   +P   TY+ L  G    G    +LSL  K+     K
Sbjct: 141 SGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYL----K 196

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
           NG+     T + L+ G CK GK+  A  +   +    + P  V YNTLINGY Q G  E 
Sbjct: 197 NGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEG 256

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             S + +M    IK D +TYNALI GLCK  +   A  L+ ++  N + P   T++ LI 
Sbjct: 257 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLID 316

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                   E+ F +   M  +G +PN   +  +++ FC+N     A  +L +M  K + P
Sbjct: 317 AYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLP 376

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++ + + +       G ++ A  L  KM+  G+ P
Sbjct: 377 NAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISP 411



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 31/165 (18%), Positives = 68/165 (41%), Gaps = 1/165 (0%)

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP-NASTYSALITGQCVRKNSER 456
           G + D   +N  +      G   +A  +++ + ++   P NA +Y+ +I G         
Sbjct: 22  GARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGD 81

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +++  M      PN   +  ++    +  D +    +  +M+   + P++I  + L S
Sbjct: 82  AVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLS 141

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
           GL   G+      L  +M  + ++P GF      +    NG+ ++
Sbjct: 142 GLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKA 186


>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Glycine max]
          Length = 729

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 227/507 (44%), Gaps = 45/507 (8%)

Query: 62  NPIPIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVL--LKVQKD 119
           +P   P  + P  +        IA  +LI+S       LS+ L       VL  L++ KD
Sbjct: 33  DPQEQPQNSRPRSRNASKTAKTIA--NLINSKPFSNGLLSSLLITISKTTVLRTLRLIKD 90

Query: 120 YVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGIL--DSDSFDLPSK 177
              +L FF W Q  K  S T E++ I+L IL + R    + + L  I      +  L  +
Sbjct: 91  PSKALRFFKWTQ-QKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDR 149

Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
            F+S                 L ++YA    F+ +   F  M+     P + + N  +S 
Sbjct: 150 FFNS-----------------LIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSI 192

Query: 238 LLDSERVDIALGFYKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
           LL   R ++A   Y EM     +SP+  T N+++  FCK  +++     F+ MES     
Sbjct: 193 LLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDA 252

Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEK--NGIQPNVITFNTLIFGFCKKGKLHEANR 354
            V TYNTL+ G C  G + +A    N M K   G+ PNV+T+ TLI G+C K ++ EA  
Sbjct: 253 DVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALV 312

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNALILGL 413
           +  EM +  + PN++TYNTL+ G  +    +    + E M  + G   D  T+N +I   
Sbjct: 313 VLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLH 372

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS------ 467
           C  G   +A  + + + K  +  ++++YS LI   C + + + A QL+  +         
Sbjct: 373 CCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSK 432

Query: 468 -GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-CMAPDS---IILSELYSGLHHCG 522
            G +P    +  +  + C++    +A  V+ +++++    P S   +I+     G +  G
Sbjct: 433 FGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGHCKEGAYESG 492

Query: 523 KDELAMKLFRK-----MEIRGLLPKGF 544
             EL M + R+     +EI   L  GF
Sbjct: 493 Y-ELLMWMLRRDFLPDIEIYDYLIDGF 518



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 94/397 (23%), Positives = 146/397 (36%), Gaps = 72/397 (18%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ ++  L +  K    + +L  +     F   +  F++I++ +  C +  L  D   K
Sbjct: 328 TYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLH--CCAGNL--DEALK 383

Query: 202 TYAHRKKFRNATDT---------FCQMRDY--------------------GFLPIIESCN 232
            +   KKFR   D+          CQ  DY                    G  P+  S N
Sbjct: 384 VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYN 443

Query: 233 KFLSSLLDSERVDIALGFYKE-MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
               SL +  +   A    ++ M+R    P  YT  ++ H  CK G  E   E+   M  
Sbjct: 444 PIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYTTVIMGH--CKEGAYESGYELLMWMLR 501

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
             F+P +  Y+ LI G   K    LA +    M K+  QP   T+++++    +KG  HE
Sbjct: 502 RDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHE 561

Query: 352 ANRIFSEMKATNVSPNV-VTYNTLI--------------------NGYG----------- 379
           ++ +   M   NV  N+ ++  +L                     NGY            
Sbjct: 562 SSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLL 621

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G       L    L N   VDI   NA IL LCK  K  +A  L  +L +N L    +
Sbjct: 622 KRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELT 681

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIR----SGCRPN 472
               LI         E A  + K + R    +G  PN
Sbjct: 682 CLDDLIAALEEGGKREEAAFISKRLPRLDNLNGSMPN 718



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 92/223 (41%), Gaps = 11/223 (4%)

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           FLP IE  +  +   L  ++  +A    ++M ++   P   T + V+    + G    + 
Sbjct: 504 FLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHESS 563

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            V   M       ++      +     +     A +  NL+ KNG    +      +   
Sbjct: 564 CVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLL-- 621

Query: 344 CKKGKLHEANR--IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            K+GKL EA +  +FS     NV  ++   N  I    ++       SL  E++ NG+  
Sbjct: 622 -KRGKLSEACKLLLFSLENHQNVDIDLC--NATILNLCKINKVSEAFSLCYELVENGLHQ 678

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDK----NSLVPNAST 440
           ++   + LI  L + GK ++AA++ K L +    N  +PN ST
Sbjct: 679 ELTCLDDLIAALEEGGKREEAAFISKRLPRLDNLNGSMPNHST 721


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 174/385 (45%), Gaps = 12/385 (3%)

Query: 159 SESILRGILD--SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           S S+L  +L   S   D  S L DS+       D S   F+ L          R  T+ F
Sbjct: 97  SASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVS--TFNSLLSALGRAGNLRGMTELF 154

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR--NRISPNVYTLNMVMHAFC 274
             MR+    P I +    L+ L  +  V  AL     M    + +  ++  LN V+   C
Sbjct: 155 TSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLC 214

Query: 275 KLGIIERAVEVF---KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
           K+G ++ A+ VF   +  +  G  P+  TYN L    C  G + +A +    MEK G+ P
Sbjct: 215 KIGRLQDAI-VFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTP 273

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKAT--NVSPNVVTYNTLINGYGQVGNSEMGAS 389
           NVIT NT++ G C+ G++  A   F E + T      N VTY+TL++ +    N  +   
Sbjct: 274 NVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAME 333

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L+ EM   G   D + Y  +I GL + G+   A  +   + K     +   Y+ LI G C
Sbjct: 334 LFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFC 393

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
            +K    A QL++ M  +G +P+ + +  L+S  C+  DF    E+L  M++    P  +
Sbjct: 394 RKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVV 453

Query: 510 ILSELYSGLHHCGKDELAMKLFRKM 534
               L  G    GK + A+K+FR M
Sbjct: 454 TFGTLVHGYCKAGKTDEALKIFRSM 478



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/318 (28%), Positives = 151/318 (47%), Gaps = 6/318 (1%)

Query: 214 DTFCQ----MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP--NVYTLN 267
           D  CQ    M   G  P + + N  +  L    RV  AL F++E R   +    N  T +
Sbjct: 257 DMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYS 316

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ AF     +  A+E+F  M   G+ P    Y T+ISG    G L  A      M+K 
Sbjct: 317 TLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKA 376

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           G + +   +N LI GFC+K +LHEA+++F EMK   + P+V TYNTL++   + G+    
Sbjct: 377 GFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAV 436

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             L   M+ +G +  ++T+  L+ G CK GKT +A  + + + +  + PN   Y+ LI  
Sbjct: 437 DELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDF 496

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
            C  +  + A +L+  M  +    N   +  L+         ++A E++ +M E+   PD
Sbjct: 497 LCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPD 556

Query: 508 SIILSELYSGLHHCGKDE 525
            + +  L   L   G+ E
Sbjct: 557 YVTMDVLMEWLPEIGETE 574



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 157/324 (48%), Gaps = 12/324 (3%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN-----MESMGFIPSV 298
           +D+A    + M +  ++PNV T+N ++   C++G +  A++ F+      +E+ G   + 
Sbjct: 256 IDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARG---NA 312

Query: 299 TTYNTLISG--HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            TY+TL+S   HCN   ++LAM+  + M   G  P+ + + T+I G  + G+L +A  I 
Sbjct: 313 VTYSTLVSAFLHCNN--VALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIA 370

Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
           + MK      +   YN LI G+ +         L+EEM   G++ D+ TYN L+  LCK 
Sbjct: 371 ASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKA 430

Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
           G       L+ ++  +   P+  T+  L+ G C    ++ A ++++SM  +  +PN  I+
Sbjct: 431 GDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIY 490

Query: 477 EMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L+   C++ + D A ++  EM E  +  +    + L  GL      E A +L  +M+ 
Sbjct: 491 NTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKE 550

Query: 537 RGLLPKGFDKLRTINCAPENGEKE 560
               P        +   PE GE E
Sbjct: 551 ERCTPDYVTMDVLMEWLPEIGETE 574



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 122/252 (48%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  L   + H      A + F +M D G+ P        +S L  + R+  A      
Sbjct: 313 VTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAAS 372

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M++     +    N+++  FC+   +  A ++F+ M+  G  P V TYNTL+S  C  G 
Sbjct: 373 MKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGD 432

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
            S   +    M  +G QP+V+TF TL+ G+CK GK  EA +IF  M    + PN V YNT
Sbjct: 433 FSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNT 492

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+   +    ++   L++EM  N +  ++ TYNAL+ GL  +   +KA  L+  + +  
Sbjct: 493 LIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEER 552

Query: 434 LVPNASTYSALI 445
             P+  T   L+
Sbjct: 553 CTPDYVTMDVLM 564



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 108/224 (48%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A +    M+  GF    ++ N  +      +R+  A   ++EM+   + P+VYT N
Sbjct: 362 RLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYN 421

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++   CK G      E+  NM   G  PSV T+ TL+ G+C  G    A+K    M + 
Sbjct: 422 TLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEA 481

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
            IQPN + +NTLI   CK  ++  A ++F EM+  NV  NV TYN L+ G       E  
Sbjct: 482 RIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKA 541

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
             L ++M       D +T + L+  L + G+T++    ++  D+
Sbjct: 542 FELMDQMKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDE 585



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 113/271 (41%), Gaps = 51/271 (18%)

Query: 291 SMGFIP-SVTTYNTLISGHC----NKGLLS-LAMKF----------KNLMEKNGIQPNVI 334
           S  F P S+ T ++L + HC    +  LLS L  +F          ++ +      P+V 
Sbjct: 73  SHAFTPASLATLHSLAARHCIPPPSASLLSKLLARFSSPADAASFLRDSLAAGAPAPDVS 132

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN+L+    + G L     +F+ M+  +V P++VTY  L+N   + G       + + M
Sbjct: 133 TFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRM 192

Query: 395 LRNGIKV--DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
              G  V  DI+  N ++ GLCK G+ + A   V                          
Sbjct: 193 SSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFV-------------------------- 226

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             ER  Q++      GC PN   +  L    C+  D D A +++  M ++ + P+ I ++
Sbjct: 227 -DERMRQVH------GCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMN 279

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
            +  GL   G+   A+  FR+     L  +G
Sbjct: 280 TIVGGLCRVGRVGAALDFFREKRTTWLEARG 310



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 18/164 (10%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++ +L  L K   F + + +L  ++D                    C  S + F  L  
Sbjct: 419 TYNTLLSCLCKAGDFSAVDELLGNMIDDG------------------CQPSVVTFGTLVH 460

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    K   A   F  M +    P     N  +  L  S  VD+A+  + EMR N +  
Sbjct: 461 GYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPA 520

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           NV T N ++       + E+A E+   M+     P   T + L+
Sbjct: 521 NVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTPDYVTMDVLM 564


>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 201/445 (45%), Gaps = 30/445 (6%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L      L+P  +  VL K+     L+L FF W +  K    T E++++++  L K ++F
Sbjct: 113 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 172

Query: 157 KS-----SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
                  S+   +GIL  ++F L                        + + YA  +K + 
Sbjct: 173 NVIWNLVSDMKRKGILSRETFAL------------------------ITRRYARARKVKE 208

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A ++F +M  +GF   +   N+ L +L  S  V  A   + +M+  R  P++ +  +++ 
Sbjct: 209 AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            + +   + +  EV++ M   GF P V T+  LI+ HC       A++  + ME   I+P
Sbjct: 269 GWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   F TLI G   + +L EA   F ++K +  +P   TYN ++  Y           + 
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCV 450
           +EM ++G+  +  TY+ ++  L K  K+K+A  + + + +     P  STY  +I   C 
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +  + A Q++  M   G  P  H+F  L+++ C     + A     EML+  + P + +
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508

Query: 511 LSELYSGLHHCGKDELAMKLFRKME 535
            S L   L   G+ + A+ +  K++
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIK 533



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 154/355 (43%), Gaps = 37/355 (10%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF    ES N  + +L   ++ ++      +M+R  I     T  ++   + +   ++ A
Sbjct: 151 GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSR-ETFALITRRYARARKVKEA 209

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           VE F+ ME  GF   V+ +N L+   C    +  A +  + M+    +P++ ++  L+ G
Sbjct: 210 VESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEG 269

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYN------------------------------ 372
           + +   L + N ++ EM+     P+VVT+                               
Sbjct: 270 WGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS 329

Query: 373 -----TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
                TLING G     +     +E++  +G   +  TYNA++   C   K   A  +V 
Sbjct: 330 PHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVD 389

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQN 486
           ++ K+ + PN+ TY  ++      + S+ A+ +++ M R  GC P    +++++  FC  
Sbjct: 390 EMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNE 449

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E  D A ++  EM  K + P   + S L + L H  K E A   F++M   G+ P
Sbjct: 450 ERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP 504



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 8/237 (3%)

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF---SEMKATNVSP 366
           N G L+L+  F+   ++ G +    ++N LI      GK+ + N I+   S+MK   +  
Sbjct: 134 NAGFLALSF-FRWAEKQKGFKHTTESYNLLIEAL---GKIKQFNVIWNLVSDMKRKGILS 189

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
              T+  +   Y +    +     +E+M + G ++ +  +N L+  LCK    KKA  + 
Sbjct: 190 RE-TFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVF 248

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +      P+  +Y+ L+ G    +N  +  ++Y+ M   G  P+   F +L++  C+ 
Sbjct: 249 DKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKA 308

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
             +D A  +  EM  K + P   +   L +GL    + + A++ F ++++ G  P+ 
Sbjct: 309 RKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 85/213 (39%), Gaps = 36/213 (16%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP VF  L       K+ + A + F Q++  GF P   + N  + +   S ++  A    
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 252 KEMRRNRISPNVYTLNMVMH------------------------------------AFCK 275
            EMR++ + PN  T ++++H                                     FC 
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
              ++ A++++  M++ G +P +  ++TLI+  C++  L  A  +   M   GI+P    
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           F+ L       G+   A  +  ++K    +P V
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKIKKLRKAPLV 541


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 207/426 (48%), Gaps = 13/426 (3%)

Query: 125 EFFTWVQTHKPSSLT----LETHSIVLHILTKNRKFKSSESILRGILD-----SDSFDLP 175
           E F   +T   S L+    L++ S V+H+LT   K+  +  +++ +++     S+  ++ 
Sbjct: 90  EAFRLFETSSISRLSKTTDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLRRYSEPTNIS 149

Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
            +LF++ L   +    S  VF LL   +     F +A     +MR     P  ++C   L
Sbjct: 150 HRLFNA-LEDIQSPKFSIGVFSLLIMEFLEMGLFEDALWVSREMRCS---PDSKACLAIL 205

Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
           + L+   R D     Y+ M    + P+V+  +++     K G   +  ++   M S+G  
Sbjct: 206 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSLGVK 265

Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
           P+V  Y   I   C +  +  A K   LM+ +G+ PN+ T++ +I G+CK G L +A  +
Sbjct: 266 PNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGL 325

Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
           + E+    + PNVV + TL++G+ +        SL+  M++ G+  ++  YN LI G CK
Sbjct: 326 YKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCK 385

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G   +A  L+ +++  +L P+  TY+ LI G C  +    A +L++ M      P+   
Sbjct: 386 SGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVT 445

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+  FC+  + ++A ++  EM    + P+ I  S L  G       + AM L+ +M 
Sbjct: 446 YNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMT 505

Query: 536 IRGLLP 541
           I+G++P
Sbjct: 506 IKGIVP 511



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 148/304 (48%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           ++ +  +      K   A   F  M+ +G +P + + +  +     +  +  A G YKE+
Sbjct: 270 IYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEI 329

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
               + PNV     ++  FCK   +  A  +F +M   G  P++  YN LI G C  G +
Sbjct: 330 LVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNM 389

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             AM   + ME   + P+V T+  LI G C + +L EANR+F  MK   + P+ VTYN+L
Sbjct: 390 LEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSL 449

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ +  N E    L  EM  +G++ +I+T++ LI G CK    K A  L  ++    +
Sbjct: 450 IHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGI 509

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP+  TY+ LI       N + A +LY  M+ +G  PN H F  L+  F +      A +
Sbjct: 510 VPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAID 569

Query: 495 VLLE 498
             LE
Sbjct: 570 FYLE 573



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 7/359 (1%)

Query: 179 FDSILYSYRMCDSSPLV-----FDLLFKTYAHRKKFRNATDTFC-QMRDYGFLPIIESCN 232
           FDS+   Y++  S  LV     + +LF+    ++ F +  +    +M   G  P +    
Sbjct: 214 FDSVWVDYQLMISRGLVPDVHIYSVLFQC-CFKQGFPSKKEKLLDEMTSLGVKPNVYIYT 272

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
            ++  L    +++ A   ++ M+ + + PN+YT + ++  +CK G + +A  ++K +   
Sbjct: 273 IYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVA 332

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
             +P+V  + TL+ G C    L  A      M K G+ PN+  +N LI G CK G + EA
Sbjct: 333 ELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEA 392

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             + SEM++ N+SP+V TY  LING            L++ M    I    +TYN+LI G
Sbjct: 393 MGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHG 452

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CKE   +KA  L  ++  + + PN  T+S LI G C  +N + A  LY  M   G  P+
Sbjct: 453 FCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPD 512

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
              +  L+    +  +   A  +  +MLE  + P+    + L  G    G+   A+  +
Sbjct: 513 VVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFY 571



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 149/343 (43%), Gaps = 44/343 (12%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +VF  L   +   ++   A   F  M  +G  P +   N  +     S  +  A+G   E
Sbjct: 339 VVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSE 398

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M    +SP+V+T  ++++  C    +  A  +F+ M++    PS  TYN+LI G C +  
Sbjct: 399 MESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYN 458

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A+   + M  +G++PN+ITF+TLI G+CK   +  A  ++ EM    + P+VVTY T
Sbjct: 459 IEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTT 518

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIK---------VD---------------------- 402
           LI+ + +  N +    LY +ML  GI          VD                      
Sbjct: 519 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAA 578

Query: 403 ------------ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
                        + +  LI GLC+ G   +A+    D+    + P+  +Y +++     
Sbjct: 579 TGKSIVQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLR 638

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            K       L+  MI++G  PN  +   L++ F Q   + R+A
Sbjct: 639 EKRITDTMMLHCDMIKTGILPNLMV-NQLLAMFYQENGYLRSA 680



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 7/280 (2%)

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           I  R     ++++S  F  S+  ++ LI      GL   A+     M      P+     
Sbjct: 148 ISHRLFNALEDIQSPKF--SIGVFSLLIMEFLEMGLFEDALWVSREMR---CSPDSKACL 202

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            ++ G  ++ +       +  M +  + P+V  Y+ L     + G       L +EM   
Sbjct: 203 AILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQCCFKQGFPSKKEKLLDEMTSL 262

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+K ++  Y   I  LC+E K ++A  + + +  + +VPN  TYSA+I G C   N  +A
Sbjct: 263 GVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQA 322

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           + LYK ++ +   PN  +F  L+  FC+  +   A  + + M++  + P+  + + L  G
Sbjct: 323 YGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHG 382

Query: 518 LHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPE 555
               G    AM L  +ME   L P  F     IN  C  E
Sbjct: 383 QCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEE 422


>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71060, mitochondrial-like [Cucumis sativus]
          Length = 542

 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 200/444 (45%), Gaps = 30/444 (6%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L      L+P  +  VL K+     L+L FF W +  K    T E++++++  L K ++F
Sbjct: 113 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 172

Query: 157 KS-----SESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
                  S+   +GIL  ++F L                        + + YA  +K + 
Sbjct: 173 NVIWNLVSDMKRKGILSRETFAL------------------------ITRRYARARKVKE 208

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A ++F +M  +GF   +   N+ L +L  S  V  A   + +M+  R  P++ +  +++ 
Sbjct: 209 AVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLE 268

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
            + +   + +  EV++ M   GF P V T+  LI+ HC       A++  + ME   I+P
Sbjct: 269 GWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           +   F TLI G   + +L EA   F ++K +  +P   TYN ++  Y           + 
Sbjct: 329 SPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMV 388

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN-SLVPNASTYSALITGQCV 450
           +EM ++G+  +  TY+ ++  L K  K+K+A  + + + +     P  STY  +I   C 
Sbjct: 389 DEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCN 448

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
            +  + A Q++  M   G  P  H+F  L+++ C     + A     EML+  + P + +
Sbjct: 449 EERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRPPATM 508

Query: 511 LSELYSGLHHCGKDELAMKLFRKM 534
            S L   L   G+ + A+ +  K+
Sbjct: 509 FSNLKQALLDDGRKDTALLMAEKI 532



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 37/355 (10%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF    ES N  + +L   ++ ++      +M+R  I     T  ++   + +   ++ A
Sbjct: 151 GFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSR-ETFALITRRYARARKVKEA 209

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           VE F+ ME  GF   V+ +N L+   C    +  A +  + M+    +P++ ++  L+ G
Sbjct: 210 VESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEG 269

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           + +   L + N ++ EM+     P+VVT+  LIN + +    +    L+ EM    IK  
Sbjct: 270 WGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPS 329

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC------------- 449
              +  LI GL  E + K+A    + L  +   P A TY+A++   C             
Sbjct: 330 PHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVD 389

Query: 450 -VRKN---------------------SERAFQLYKSMIRS-GCRPNKHIFEMLMSTFCQN 486
            +RK+                     S+ A+ +++ M R  GC P    +++++  FC  
Sbjct: 390 EMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNE 449

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           E  D A ++  EM  K + P   + S L + L H  K E A   F++M   G+ P
Sbjct: 450 ERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVGIRP 504



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 54/237 (22%), Positives = 109/237 (45%), Gaps = 8/237 (3%)

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF---SEMKATNVSP 366
           N G L+L+  F+   ++ G +    ++N LI      GK+ + N I+   S+MK   +  
Sbjct: 134 NAGFLALSF-FRWAEKQKGFKHTTESYNLLIEAL---GKIKQFNVIWNLVSDMKRKGILS 189

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
              T+  +   Y +    +     +E+M + G ++ +  +N L+  LCK    KKA  + 
Sbjct: 190 RE-TFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVF 248

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             +      P+  +Y+ L+ G    +N  +  ++Y+ M   G  P+   F +L++  C+ 
Sbjct: 249 DKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKA 308

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
             +D A  +  EM  K + P   +   L +GL    + + A++ F ++++ G  P+ 
Sbjct: 309 RKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEA 365


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 158/319 (49%), Gaps = 2/319 (0%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P   S    + +L    R   A+G  ++M+ + + P+V T   ++   C    +++AVE+
Sbjct: 111 PTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVEL 170

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
            + M   G  P+V  Y+ L+ G+C  G      K    M   GI+P+V+ +  LI   C+
Sbjct: 171 LREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
           +GK+ +A ++  +M    + PNVVTYN LIN   + G+ +   SL   ML  G+ +D +T
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290

Query: 406 YNALILGLCKEGKTKKAAYLVKDL--DKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
           YN LI GL    +  +A  L++++   +  + PN  T++++I G C      +AFQ+   
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350

Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           M  +GC  N   F +L+    +     +A E++ EM    + PDS   S L +G     +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410

Query: 524 DELAMKLFRKMEIRGLLPK 542
            + A  L  KM   G+ P+
Sbjct: 411 VDRAESLLSKMRRDGIEPE 429



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 167/342 (48%), Gaps = 4/342 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  L +     ++   A      M+  G  P + +    +  L D+  VD A+   +EM 
Sbjct: 116 YTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC 175

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + I PNV   + ++  +CK G  E   +VF+ M   G  P V  Y  LI   C +G + 
Sbjct: 176 ESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVK 235

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M + G++PNV+T+N LI   CK+G + EA  + + M    V+ + VTYNTLI
Sbjct: 236 KATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLI 295

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVD--ILTYNALILGLCKEGKTKKAAYLVKD-LDKN 432
            G   V   +    L EEM+     V+  ++T+N++I GLCK G+ ++ A+ V+D + +N
Sbjct: 296 TGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ-AFQVRDMMAEN 354

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
               N  T++ LI G       ++A +L   M  SG  P+   + +L++ FC+    DRA
Sbjct: 355 GCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA 414

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             +L +M    + P+ +    L + L   G  E A   F +M
Sbjct: 415 ESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM 456



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 185/389 (47%), Gaps = 17/389 (4%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSS----PLVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D+   D   +L         MC+S      +V+  L + Y    ++   +  F
Sbjct: 153 TLIRGLCDAADVDKAVELL------REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVF 206

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P +      + SL    +V  A     +M    + PNV T N+++++ CK 
Sbjct: 207 EEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKE 266

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME----KNGIQPN 332
           G ++ A+ +  NM   G      TYNTLI+G    G+L +      L E    +  ++PN
Sbjct: 267 GSVKEAMSLRNNMLEKGVALDAVTYNTLITGL--SGVLEMDEAMGLLEEMIHGETMVEPN 324

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V+TFN++I G CK G++ +A ++   M     + N+VT+N LI G  +V   +    L +
Sbjct: 325 VVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMD 384

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM  +G++ D  TY+ LI G CK  +  +A  L+  + ++ + P    Y  L+   C + 
Sbjct: 385 EMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQG 444

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS 512
             E+A   +  M ++ C+ +   +  ++   C+  D   A E L  ML++ + PDS+  S
Sbjct: 445 MMEQARNFFDEMHKN-CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYS 503

Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            L +   + G    A ++ ++M   G +P
Sbjct: 504 MLINMFANSGDLGAAERVLKQMTASGFVP 532



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 3/303 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D AL F   +  +   P   +   +M A C      +AV + ++M++ G  P V TY T
Sbjct: 95  LDAAL-FLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGT 153

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C+   +  A++    M ++GI+PNV+ ++ L+ G+CK G+    +++F EM    
Sbjct: 154 LIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRG 213

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           + P+VV Y  LI+   + G  +    + ++M+  G++ +++TYN LI  +CKEG  K+A 
Sbjct: 214 IEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAM 273

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGCRPNKHIFEMLMS 481
            L  ++ +  +  +A TY+ LITG       + A  L + MI   +   PN   F  ++ 
Sbjct: 274 SLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIH 333

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+     +A +V   M E   A + +  + L  GL    K + AM+L  +M   GL P
Sbjct: 334 GLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEP 393

Query: 542 KGF 544
             F
Sbjct: 394 DSF 396



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 124/243 (51%), Gaps = 3/243 (1%)

Query: 295 IPSV---TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +PSV    +YNT+++  C +G    A  F   +  +  +P  +++ TL+   C + +  +
Sbjct: 72  LPSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQ 131

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A  +  +M+A+ V P+VVTY TLI G     + +    L  EM  +GI+ +++ Y+ L+ 
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQ 191

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           G CK G+ +  + + +++    + P+   Y+ LI   C     ++A Q+   M+  G  P
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N   + +L+++ C+      A  +   MLEK +A D++  + L +GL    + + AM L 
Sbjct: 252 NVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLL 311

Query: 532 RKM 534
            +M
Sbjct: 312 EEM 314



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/375 (21%), Positives = 153/375 (40%), Gaps = 75/375 (20%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L+G   +  ++  SK+F+ +  S R  +   +++  L  +     K + AT    +M +
Sbjct: 189 LLQGYCKAGRWECVSKVFEEM--SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMME 246

Query: 222 YGFLPIIESCNKFLSSLLDSERV-----------------------------------DI 246
            G  P + + N  ++S+     V                                   D 
Sbjct: 247 RGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDE 306

Query: 247 ALGFYKEMRRNR--ISPNVYTLNMVMHAFCKLG--------------------------- 277
           A+G  +EM      + PNV T N V+H  CK G                           
Sbjct: 307 AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLL 366

Query: 278 --------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
                    +++A+E+   M S G  P   TY+ LI+G C    +  A    + M ++GI
Sbjct: 367 IGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGI 426

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P ++ +  L+   C++G + +A   F EM   N   +VV Y+T+I+G  ++ + +    
Sbjct: 427 EPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEE 485

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
             + ML  G+  D +TY+ LI      G    A  ++K +  +  VP+ + + +LI G  
Sbjct: 486 FLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYG 545

Query: 450 VRKNSERAFQLYKSM 464
            + ++E+  +L + M
Sbjct: 546 AKGDTEKVLELIREM 560



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 137/293 (46%), Gaps = 6/293 (2%)

Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
           L G+L+ D       L + +++   M + + + F+ +        + R A      M + 
Sbjct: 298 LSGVLEMDE---AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAEN 354

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G    + + N  +  LL   +V  A+    EM  + + P+ +T +++++ FCK+  ++RA
Sbjct: 355 GCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRA 414

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
             +   M   G  P +  Y  L++  C +G++  A  F + M KN  + +V+ ++T+I G
Sbjct: 415 ESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYSTMIHG 473

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            C+      A      M    + P+ VTY+ LIN +   G+      + ++M  +G   D
Sbjct: 474 ACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPD 533

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
           +  +++LI G   +G T+K   L++++    +  ++   S + T  C+  N+E
Sbjct: 534 VAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYT--CLVANNE 584



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 102/208 (49%)

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           + +++NT++   C++G   +A      + A    P  V+Y TL+        +     L 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
            +M  +G++ D++TY  LI GLC      KA  L++++ ++ + PN   YS L+ G C  
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
              E   ++++ M   G  P+  ++  L+ + C+     +A +V+ +M+E+ + P+ +  
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGL 539
           + L + +   G  + AM L   M  +G+
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGV 284



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 89/175 (50%)

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + V+YNT++    + G     A     ++ +  +   ++Y  L+  LC E +T +A  L+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           +D+  + + P+  TY  LI G C   + ++A +L + M  SG  PN  ++  L+  +C+ 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             ++  ++V  EM  + + PD ++ + L   L   GK + A ++  KM  RGL P
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEP 251


>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 214/439 (48%), Gaps = 33/439 (7%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           L+K + D   +LE F  V   +  S    T++ +LH L K++KF++ +++L  +      
Sbjct: 66  LIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQM------ 119

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR----DYGFLPII 228
                       +Y  C     +F  L K ++         + F  +R    +   L  I
Sbjct: 120 ------------TYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAI 167

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
            +C   L+ L++S +VD+   F    +++  + PN    N+++   CK G I+ A EV +
Sbjct: 168 STC---LNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVE 224

Query: 288 NME-SMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCK 345
            M+ S    P++ TY+TLI+G C  G L  A++ F+ ++ K+ I P+ +T+N LI GFC 
Sbjct: 225 EMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCH 284

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             K+  A +I   MK    +PNV  Y+ L+NG+ + G  E    +++EM   G+K D + 
Sbjct: 285 GEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVG 344

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI   C+ G+  +A  L+KD+ +N    +  T++ ++ G C     E A  + + + 
Sbjct: 345 YTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLP 404

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G   NK  + +++++ C+  +  +A +++  ML + + P     +EL   L   GK  
Sbjct: 405 YEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVG 464

Query: 526 LAMKLFRKMEIRGLLPKGF 544
            A+     M + GLL  GF
Sbjct: 465 DAV-----MALLGLLELGF 478



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 157/331 (47%), Gaps = 16/331 (4%)

Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
           SL LE ++ + +IL K+           G +DS +F++  ++  S + SY     + + +
Sbjct: 193 SLNLEPNTCIFNILVKHH-------CKNGDIDS-AFEVVEEMKKSHV-SY----PNLITY 239

Query: 197 DLLFKTYAHRKKFRNATDTFCQM--RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
             L        + + A + F +M  +D   LP   + N  ++     E+VD AL   + M
Sbjct: 240 STLINGLCGSGRLKEAIELFEEMVSKDQ-ILPDALTYNALINGFCHGEKVDRALKIMEFM 298

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           ++N  +PNV+  + +M+ FCK G +E A EVF  M+S+G  P    Y TLI+  C  G +
Sbjct: 299 KKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRV 358

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             AM+    M +N  + + +TFN ++ G C++G+  EA  +   +    V  N  +Y  +
Sbjct: 359 DEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIV 418

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +N   + G  +    L   ML  G+     T N L++ LC+ GK   A   +  L +   
Sbjct: 419 LNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELGF 478

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMI 465
            P  ++++ L+   C  +    AF+L   ++
Sbjct: 479 KPEPNSWALLVELICRERKLLPAFELLDDLV 509



 Score = 45.8 bits (107), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 102/249 (40%), Gaps = 8/249 (3%)

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
           F  + E+ G   N  T+ T++    K  K    + +  +M       +   +  L+  + 
Sbjct: 80  FNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFS 139

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK----TKKAAYLVKDLDKNSLV 435
           ++   E    +++ +     +   L   +  L L  E      T+K  +L+      +L 
Sbjct: 140 KLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRK--FLLNSKKSLNLE 197

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR-PNKHIFEMLMSTFCQNEDFDRAAE 494
           PN   ++ L+   C   + + AF++ + M +S    PN   +  L++  C +     A E
Sbjct: 198 PNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIE 257

Query: 495 VLLEMLEK-CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCA 553
           +  EM+ K  + PD++  + L +G  H  K + A+K+   M+  G  P  F+    +N  
Sbjct: 258 LFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGF 317

Query: 554 PENGEKESG 562
            + G  E  
Sbjct: 318 CKEGRLEEA 326


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 170/336 (50%), Gaps = 8/336 (2%)

Query: 203 YAHRKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
           + H  K  N T T   Q  D     II S N  L +L   +        YK+M    +SP
Sbjct: 66  FIHNCKKGNITSTQALQFFDLMMRSII-SFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N +TLN++++  C +  +   +     +   G+IP V TY +LI G C +  +S A +  
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM------KATNVSPNVVTYNTLI 375
             M+K G  PNV+T+ TLI G C+ G ++ A ++  EM       A N  PN+ +YN +I
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           +   ++G  +    L+ EM+  G++ D++T++ALI  LCKEG   +A   ++ +    +V
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+  T+++LI G C+  + + A +L+ SM   G  P+   + +L+  +C+  + + A ++
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
             EML     PD      L  GL   GK   A KLF
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLF 400



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 168/377 (44%), Gaps = 41/377 (10%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN- 257
           L K      +   AT  F +M+  G  P + +    +  L  +  +++AL  ++EM    
Sbjct: 167 LIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGT 226

Query: 258 -----RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
                   PN+++ N+++   CK+G  + A  +F  M   G  P V T++ LI   C +G
Sbjct: 227 SPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEG 286

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
           ++  A KF   M   GI P++ TF +LI GFC  G L  A  +F  M +    P+V++Y 
Sbjct: 287 MVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYT 346

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL--------------------- 411
            LI GY +  N E    LY EMLR G   D+ T+  L+                      
Sbjct: 347 VLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPH 406

Query: 412 --------------GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
                         GLCK G   +A  L  +L   ++  +  +++ LI G C  +  E A
Sbjct: 407 AVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETA 466

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
           ++L++ + + G +P+   + ++++ FC+N   D A  +   M E    P+ +  S L  G
Sbjct: 467 WELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526

Query: 518 LHHCGKDELAMKLFRKM 534
            +   K E  +KL  KM
Sbjct: 527 FYKNNKLEEVVKLLHKM 543



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 171/415 (41%), Gaps = 43/415 (10%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+LL    A  K +      + +M   G  P   + N  ++ L +  RV   L   
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
             + R    P+V T   ++   C    I  A  +F  M+ +G  P+V TY TLI G C  
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 312 GLLSLAMKFKNLMEKNG-------IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           G ++LA+K    M  NG        +PN+ ++N +I   CK GK  EA R+F+EM    V
Sbjct: 210 GNINLALKLHQEM-LNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+VVT++ LI+   + G         E M+  GI  D+ T+ +LI G C  G    A  
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP------------- 471
           L   +      P+  +Y+ LI G C   N E A +LY  M+R G  P             
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388

Query: 472 ----------------------NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
                                 N +I  + +   C+N     A E+  E+    M  D  
Sbjct: 389 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 448

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
             + L  GL    K E A +LF K+   GL P        IN   +NG+ ++  +
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANI 503



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSIL-----YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
           ++++G+  + + +L  KL   +L     Y+   C  +   ++++        K++ A   
Sbjct: 201 TLIKGLCRTGNINLALKLHQEMLNGTSPYAIN-CKPNIFSYNIIIDELCKIGKWKEAKRL 259

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +M D G  P + + +  + +L     V  A  F + M    I P+++T   ++  FC 
Sbjct: 260 FNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCL 319

Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVIT 335
           +G ++ A E+F +M S G+ P V +Y  LI G+C    +  AMK  N M + G  P++ T
Sbjct: 320 VGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKT 379

Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
           F  L+ G    GK+ +A ++F  +K   V  N+   +  ++G  + G       L+ E+ 
Sbjct: 380 FCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELK 439

Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
              +K+DI ++N LI GLCK  K + A  L + L +  L P+  TY  +I G C     +
Sbjct: 440 SYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVD 499

Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
            A  L++ M  +GC PN   +  L+  F +N   +   ++L +M++K
Sbjct: 500 NANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 114/245 (46%), Gaps = 13/245 (5%)

Query: 308 HCNKGLLS--LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +C KG ++   A++F +LM ++     +I+FN L+    K     +   ++ +M    +S
Sbjct: 69  NCKKGNITSTQALQFFDLMMRS-----IISFNLLLGALAKIKHYSQVFSLYKKMHLAGLS 123

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN  T N LIN    V     G S    ++R G   D++TY +LI GLC E +  +A  L
Sbjct: 124 PNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRL 183

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS------GCRPNKHIFEML 479
              + K    PN  TY  LI G C   N   A +L++ M+         C+PN   + ++
Sbjct: 184 FIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNII 243

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +   C+   +  A  +  EM+++ + PD +  S L   L   G    A K    M +RG+
Sbjct: 244 IDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGI 303

Query: 540 LPKGF 544
           +P  F
Sbjct: 304 VPDLF 308



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 13/247 (5%)

Query: 163 LRGILDSDS---FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           L G LDS       +PSK ++  + SY           +L   Y        A   + +M
Sbjct: 319 LVGDLDSAKELFLSMPSKGYEPDVISY----------TVLIYGYCKTFNVEEAMKLYNEM 368

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P +++    L  L  + +V  A   +  ++ + +  N+Y  ++ +   CK G +
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCL 428

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A+E+F  ++S      + ++N LI G C    L  A +    + + G+QP+V+T+  +
Sbjct: 429 FEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIM 488

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFCK G++  AN +F  M+    +PN++TY+ L++G+ +    E    L  +M++  +
Sbjct: 489 INGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDV 548

Query: 400 KVDILTY 406
            +    Y
Sbjct: 549 SLAASIY 555



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 116/247 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L + +       +A + F  M   G+ P + S    +     +  V+ A+  Y EM 
Sbjct: 310 FTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 369

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P++ T  +++      G +  A ++F  ++      ++   +  + G C  G L 
Sbjct: 370 RVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLF 429

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM+  N ++   ++ ++ +FN LI G CK  KL  A  +F ++    + P+VVTY  +I
Sbjct: 430 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMI 489

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG+ + G  +    L++ M  NG   ++LTY+AL+ G  K  K ++   L+  + +  + 
Sbjct: 490 NGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVS 549

Query: 436 PNASTYS 442
             AS Y+
Sbjct: 550 LAASIYT 556


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 192/407 (47%), Gaps = 21/407 (5%)

Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPL 194
           P+ LT+   +I++  L K +K + + SI  G+ D                  ++C  + +
Sbjct: 437 PNVLTV---NIMIDRLCKAQKLEEACSIFEGMDD------------------KVCTPNAV 475

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            F  L        +  +A   + +M D G +P        + S     R +     YKEM
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
                SP++  +N  M    K G  E+   +F+ + + GFIP   +Y+ LI G    GL 
Sbjct: 536 VHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLA 595

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           +   +    M++ G   +   +N +I GFCK GK+++A ++  EMK     P VVTY ++
Sbjct: 596 NETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSV 655

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G  ++   +    L+EE   NGIK++++ Y++LI G  K G+  +A  ++++L +  L
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  T++ L+      +    A   ++SM    C PN+  + +L++  C+   F++A  
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              EM +  + P++I  + + SGL   G    A  LF + +  G +P
Sbjct: 776 FWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 191/400 (47%), Gaps = 12/400 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++  +  ++  D   +LF+ +  + ++       ++ +   Y    KF  A     + +
Sbjct: 305 SMIGVLCKANRLDEAVELFEQLEQNRKV--PCAYAYNTMIMGYGSAGKFDEAYGLLERQK 362

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +P + + N  L+ L    RV+ AL  ++EM+R+ + PNV T N+++   C+ G + 
Sbjct: 363 AKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLN 421

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A+E+  +ME  G  P+V T N +I   C    L  A      M+     PN +TF++LI
Sbjct: 422 AALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLI 481

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K G++ +A  ++ +M      P  + Y +LI  + + G  E G  +Y+EM+  G  
Sbjct: 482 DGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCS 541

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+   N  +  + K G+T+K   L ++++ +  +P+A +YS LI G      +   ++L
Sbjct: 542 PDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYEL 601

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           + +M   GC  + H +  ++  FC++   ++A ++L EM  K   P  +    +  GL  
Sbjct: 602 FYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 661

Query: 521 CGKDELAMKLFRKMEIRGL---------LPKGFDKLRTIN 551
             + + A  LF + +  G+         L  GF K+  I+
Sbjct: 662 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRID 701



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/466 (24%), Positives = 202/466 (43%), Gaps = 20/466 (4%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L+AL     P  V  VL ++ KD   ++ +F W +         E ++ +L ++ +N +F
Sbjct: 83  LSALGEKPLPELVIGVLKRL-KDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEF 141

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
              E IL  +  S                     SS +  +L+      RK  R A D  
Sbjct: 142 DHLERILEEMSLSG-----------------FGPSSNISIELVANCVKSRK-LREAFDII 183

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
             MR + F P   +    + +L +    D  L  + +M+      NV+    ++  F + 
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G ++ A+ +   M+S      +  YN  I      G + ++ KF + M+ +G+ P+ +T+
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
            ++I   CK  +L EA  +F +++     P    YNT+I GYG  G  +    L E    
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G    ++ YN ++  L K+ + ++A  + +++ +++ VPN  TY+ LI   C       
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDA-VPNVPTYNILIDMLCREGKLNA 422

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A ++   M R+G  PN     +++   C+ +  + A  +   M +K   P+++  S L  
Sbjct: 423 ALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLID 482

Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
           GL  CG+ + A  L+ KM   G +P        I    + G KE G
Sbjct: 483 GLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDG 528



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 164/362 (45%), Gaps = 7/362 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
           S + ++ +      +++   A   F +M RD   +P + + N  +  L    +++ AL  
Sbjct: 369 SVIAYNCILTCLGKKRRVEEALRIFEEMKRDA--VPNVPTYNILIDMLCREGKLNAALEI 426

Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
             +M R  + PNV T+N+++   CK   +E A  +F+ M+     P+  T+++LI G   
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486

Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
            G +  A      M   G  P  I + +LI  F K G+  + ++I+ EM  T  SP++  
Sbjct: 487 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 546

Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
            NT ++   + G +E G +L+ E+  +G   D  +Y+ LI GL K G   +   L   + 
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
           +   V +   Y+A+I G C      +A+QL + M   G  P    +  ++    + +  D
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666

Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTI 550
            A  +  E     +  + ++ S L  G    G+ + A  +  ++  +GL P  +    T 
Sbjct: 667 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVY----TW 722

Query: 551 NC 552
           NC
Sbjct: 723 NC 724



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 2/283 (0%)

Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
           + F  M++ G +    + N  +     S +V+ A    +EM+     P V T   V+   
Sbjct: 600 ELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGL 659

Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPN 332
            K+  ++ A  +F+  +S G   +V  Y++LI G    G +  A +  + LM+K G+ PN
Sbjct: 660 AKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPN 718

Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
           V T+N L+    K  +++EA   F  MK     PN +TY+ LING  +V         ++
Sbjct: 719 VYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQ 778

Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRK 452
           EM + G+K + +TY  +I GL K G   +A+ L      N  +P++++Y+A+I G     
Sbjct: 779 EMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSAN 838

Query: 453 NSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  A+ L++     GC  +     +L+    + E  ++AA V
Sbjct: 839 KAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECLEQAAIV 881



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 4/208 (1%)

Query: 236 SSLLDS----ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           SSL+D      R+D A    +E+ +  ++PNVYT N ++ A  K   I  A+  F++M+ 
Sbjct: 688 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKD 747

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +   P+  TY+ LI+G C     + A  F   M+K G++PN IT+ T+I G  K G + E
Sbjct: 748 LKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILE 807

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           A+ +FS  KA    P+  +YN +I G      +    +L+EE    G  +   T   L+ 
Sbjct: 808 ASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLD 867

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
            L K    ++AA +   L + +   +AS
Sbjct: 868 ALHKAECLEQAAIVGAVLKETAKSQHAS 895



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 2/125 (1%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L       ++   A   F  M+D    P   + +  ++ L    + + A  F++EM+
Sbjct: 722 WNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ 781

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG--HCNKGL 313
           +  + PN  T   ++    K G I  A  +F   ++ G IP   +YN +I G    NK +
Sbjct: 782 KLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAM 841

Query: 314 LSLAM 318
            + A+
Sbjct: 842 DAYAL 846


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/339 (30%), Positives = 174/339 (51%), Gaps = 3/339 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           + K YA  K    A DTF  M+D +G  P + S N  L++ ++    D A  F +     
Sbjct: 86  VIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESM 145

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
            +SPN+ T N+++   CK   IE+A+ +   M S    P V +Y TLI+G    G L  A
Sbjct: 146 DVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGA 205

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLIN 376
           +K  + M   G+  +V  +N LI GF K G   +   I+  + K  +V PNVVTYN +IN
Sbjct: 206 LKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMIN 265

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G  +    ++E M +N  + D+ TY++LI GLC+ G    A  + K++ ++SLV 
Sbjct: 266 GLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVV 325

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +A T++A++ G C     + +F+L+  M +  C+     + +L+    +N   + A  + 
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVS-YNILIKGLFENGKVEEAISIW 384

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
             + +K   P+S     L  GL   G+   A+K+F++ E
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAE 423



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 189/395 (47%), Gaps = 6/395 (1%)

Query: 150 LTKNRKFK---SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR 206
           +TKN + K   +  S++ G+ ++ + D   +++  I+ S  + D+  +  + +   +   
Sbjct: 283 MTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDA--VTHNAMLNGFCRA 340

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            K + + + +  M       ++ S N  +  L ++ +V+ A+  ++ + +    P   T 
Sbjct: 341 GKIKESFELWMVMGKENCQTVV-SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTY 399

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
            +++H  CK G + +A+++FK  E          Y++++ G C +G +  A+   N M+K
Sbjct: 400 GVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDK 459

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
            G + +    N LI GF +  KL +A   F EM+    SP +V+YNTLI G  +      
Sbjct: 460 RGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSE 519

Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
             S  +EML    K D++T + L+ GLC+E K + A  L +        P+ + Y+ L+ 
Sbjct: 520 AYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMH 579

Query: 447 GQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           G C     E A QLY  M RS C PN      LM    +  D+++A+E+   +L+  + P
Sbjct: 580 GLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHP 639

Query: 507 DSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           D I  +    GL  C +   A++       RG+LP
Sbjct: 640 DIISYNITIKGLCSCSRISDAIEFLNDALNRGILP 674



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 157/317 (49%), Gaps = 21/317 (6%)

Query: 245 DIALGFYKEMRRNRIS-----------------PNVYTLNMVMHAFCKLGIIERAVEVFK 287
           D+AL   K   +N++S                 P V + N +++AF +L   +RA    +
Sbjct: 81  DVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSR 140

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
             ESM   P++ TYN LI   C K  +  A+   + M    ++P+V ++ TLI G  K G
Sbjct: 141 YFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVG 200

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTY 406
            L  A ++F EM    V  +V  YN LI+G+ + G+ + G  ++E ++++  +  +++TY
Sbjct: 201 DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTY 260

Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
           N +I GLCK G+  ++  + + + KN    +  TYS+LI G C   N + A ++YK ++ 
Sbjct: 261 NIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVE 320

Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM-LEKCMAPDSIILSELYSGLHHCGKDE 525
           S    +      +++ FC+      + E+ + M  E C    S  +  L  GL   GK E
Sbjct: 321 SSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNI--LIKGLFENGKVE 378

Query: 526 LAMKLFRKMEIRGLLPK 542
            A+ ++  +  +G  P+
Sbjct: 379 EAISIWELLCKKGCRPE 395



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 144/304 (47%), Gaps = 18/304 (5%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+ +++H L KN +   +  I +     ++ D P KL D+  YS         + D L K
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFK-----EAEDGPGKL-DAYAYSS--------MVDGLCK 443

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 +   A     QM   G+      CN  ++  + + +++ A+ F++EM     SP
Sbjct: 444 ----EGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSP 499

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
            + + N ++   CK      A    K M    + P + T + L+ G C +  + +A+   
Sbjct: 500 TIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLW 559

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
                 G +P++  +N L+ G C   KL +A +++S MK +   PN+VT NTL+ G  +V
Sbjct: 560 QQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKV 619

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
            + E  + +++ +L++G+  DI++YN  I GLC   +   A   + D     ++P A T+
Sbjct: 620 RDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTW 679

Query: 442 SALI 445
           + L+
Sbjct: 680 NILV 683


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 210/484 (43%), Gaps = 75/484 (15%)

Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA 204
           IV H++ +  + K    +L  +++ +       L + +  S+R  D + +V+D+L   Y+
Sbjct: 120 IVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAYS 179

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE---------------------- 242
             +   +A     +M+       I + N  L +L  ++                      
Sbjct: 180 RAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASGVPQNEYTNP 239

Query: 243 ----------RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
                     R+  A+ F +E       P+V + N +M  FCK+G ++ A   F  M   
Sbjct: 240 ILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKY 299

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G +P V +YN L+ G C  G +  A++F N ME +G++P+++T+N L  GF   G +  A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            ++   M    ++P++VTY  LI G+ Q+GN E    L E+ML  G+K+ I+TY  L+  
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSS 419

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LCK G+  +A  L+ +++   L P+  TYS        R   E A +LY+ M      PN
Sbjct: 420 LCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAVEEAIELYEEMCSKRIYPN 471

Query: 473 KHIFEMLMSTFCQNEDF-------------DRAAEVLL---------------------- 497
             +   ++S   +                 D A E++L                      
Sbjct: 472 SFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYK 531

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           +++EK ++P  +  + L  G    GK   A+KL   +++ GL+P        +N   E G
Sbjct: 532 QIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEG 591

Query: 558 EKES 561
           +  S
Sbjct: 592 DMHS 595



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/299 (29%), Positives = 157/299 (52%), Gaps = 6/299 (2%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           V+ A+  Y+EM   RI PN +  + ++    + G I  A   F ++        +  YN 
Sbjct: 453 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNI 512

Query: 304 LISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           +I G+   G +  A++ +K ++EK GI P ++TFN+LI+GFCKKGKL EA ++   +K  
Sbjct: 513 MIDGYAKLGNIGEAVRSYKQIIEK-GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P  VTY TL+NGY + G+      +  EM    IK   +TY  ++ GLCKEG+  ++
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 631

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+K +    L P+  TY+ +I   C   + ++AFQL+  M++   +P+   + +L++ 
Sbjct: 632 VQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLING 691

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGL 539
            C   +   A  +L+ + ++ +    +  + +     HC K ++  A+  F +M  RG 
Sbjct: 692 LCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKA--HCAKGDVQNALVFFHQMVERGF 748



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 146/295 (49%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  YK++    ISP + T N +++ FCK G +  AV++   ++  G +P+  TY TL++
Sbjct: 526 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+C +G +       + ME   I+P  IT+  ++ G CK+G+LHE+ ++   M A  + P
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 645

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + +TYNT+I  + +  + +    L+ +ML++ ++   +TYN LI GLC  G  K A  L+
Sbjct: 646 DQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLL 705

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             L   S+      Y+ +I   C + + + A   +  M+  G   +   +  +++  C+ 
Sbjct: 706 VTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKR 765

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                A      ML   + PD  I   + +  H  G      ++F  M   GLLP
Sbjct: 766 NLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 174/412 (42%), Gaps = 62/412 (15%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ L   +        A   FC M  YG LP + S N  L  L  +  ++ AL F 
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M  + + P++ T N++ + F  LG+I  A +V + M   G  P + TY  LI GHC  
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 312 GLLSLAMKFK-----------------------------------NLMEKNGIQPNVITF 336
           G +  + K K                                   + ME  G++P+++T+
Sbjct: 389 GNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY 448

Query: 337 N---------------------------TLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
           +                            +I G  +KG + EA   F  +  ++V+  ++
Sbjct: 449 SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 508

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
            YN +I+GY ++GN       Y++++  GI   I+T+N+LI G CK+GK  +A  L+  +
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
             + LVP + TY+ L+ G C   +    F +   M     +P +  + +++   C+    
Sbjct: 569 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 628

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + ++L  M  + + PD I  + +          + A +L  +M    L P
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 680



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 151/306 (49%), Gaps = 3/306 (0%)

Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
           DLL  TY+ R     A + + +M      P    C+  +S L +   +  A  ++  + +
Sbjct: 444 DLL--TYS-RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTK 500

Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
           + ++  +   N+++  + KLG I  AV  +K +   G  P++ T+N+LI G C KG L+ 
Sbjct: 501 SDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAE 560

Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           A+K  + ++ +G+ P  +T+ TL+ G+C++G +H    +  EM+A  + P  +TY  ++ 
Sbjct: 561 AVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVK 620

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G  + G       L + M   G+  D +TYN +I   CK    +KA  L   + ++SL P
Sbjct: 621 GLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQP 680

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY+ LI G CV  N + A +L  ++     R  K  +  ++   C   D   A    
Sbjct: 681 SPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFF 740

Query: 497 LEMLEK 502
            +M+E+
Sbjct: 741 HQMVER 746



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 143/285 (50%), Gaps = 8/285 (2%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            LSSL  S R+D A+    EM    + P++ T +         G +E A+E+++ M S  
Sbjct: 416 LLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKR 467

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             P+    + +ISG   KG +S A  + + + K+ +   +I +N +I G+ K G + EA 
Sbjct: 468 IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAV 527

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
           R + ++    +SP +VT+N+LI G+ + G       L + +  +G+    +TY  L+ G 
Sbjct: 528 RSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGY 587

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C+EG       ++ +++  ++ P   TY+ ++ G C       + QL K M   G  P++
Sbjct: 588 CEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQ 647

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +  ++ +FC+  D  +A ++  +ML+  + P  +  + L +GL
Sbjct: 648 ITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGL 692



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 2/346 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +I+ G+ +  +       FDS+  S        ++++++   YA       A  ++ Q+ 
Sbjct: 477 AIISGLFEKGAISEAQMYFDSVTKSD--VAEEIILYNIMIDGYAKLGNIGEAVRSYKQII 534

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           + G  P I + N  +       ++  A+     ++ + + P   T   +M+ +C+ G + 
Sbjct: 535 EKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 594

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
              ++   ME+    P+  TY  ++ G C +G L  +++    M   G+ P+ IT+NT+I
Sbjct: 595 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 654

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
             FCK   L +A ++ ++M   ++ P+ VTYN LING    GN +    L   +    I+
Sbjct: 655 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 714

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +  + Y  +I   C +G  + A      + +     +   YSA+I   C R     A   
Sbjct: 715 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 774

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
           +  M+  G  P++ I  ++++ F ++ D +   E+   M++  + P
Sbjct: 775 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLLP 820


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 168/338 (49%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G+ P   + +  ++ L    RV  AL     M      P + TLN +++  C  G +  A
Sbjct: 137 GYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA 196

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
           V +   M   GF P+  TY  ++   C  G  +LAM+    ME+  I+ + + ++ +I G
Sbjct: 197 VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
            CK G L  A  +F+EM+      +++ Y TLI G+   G  + GA L  +M++  I  D
Sbjct: 257 LCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD 316

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
           ++ ++ALI    KEGK ++A  L K++ +  + P+  TY++LI G C     ++A  +  
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+  GC PN   F +L++ +C+    D   E+  +M  + +  D++  + L  G    G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
           K E+A +LF++M  R + P        ++   +NGE E
Sbjct: 437 KLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 159/342 (46%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + F  L        +   A +   +M + G  P + + N  ++ L  + +V  A+     
Sbjct: 143 VTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDR 202

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M      PN  T   V+   CK G    A+E+ + ME          Y+ +I G C  G 
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N ME  G + ++I + TLI GFC  G+  +  ++  +M    ++P+VV ++ 
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+ + + G       L++EM++ GI  D +TY +LI G CKE +  KA +++  +    
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
             PN  T++ LI G C     +   +L++ M   G   +   +  L+  FC+    + A 
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           E+  EM+ + + PD +    L  GL   G+ E A+++F K+E
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE 484



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 147/298 (49%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           NA + F +M   GF   I      +     + R D      ++M + +I+P+V   + ++
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
             F K G +  A E+ K M   G  P   TY +LI G C +  L  A    +LM   G  
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
           PN+ TFN LI G+CK   + +   +F +M    V  + VTYNTLI G+ ++G  E+   L
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444

Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
           ++EM+   ++ DI++Y  L+ GLC  G+ +KA  + + ++K+ +  +   Y+ +I G C 
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504

Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
               + A+ L+ S+   G +P+   + +++   C+      A  +  +M E   +P+ 
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 178/389 (45%), Gaps = 44/389 (11%)

Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
           +A D F +M      P +   ++  S +  +++ D+ L   K+M    I+ N+YTL++++
Sbjct: 55  DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114

Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
           +  C+   +  A      +  +G+ P   T++TLI+G C +G +S A++  + M + G +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174

Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY------------------- 371
           P +IT N L+ G C  GK+ +A  +   M  T   PN VTY                   
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234

Query: 372 ----------------NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
                           + +I+G  + G+ +   +L+ EM   G K DI+ Y  LI G C 
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294

Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
            G+    A L++D+ K  + P+   +SALI           A +L+K MI+ G  P+   
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354

Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
           +  L+  FC+    D+A  +L  M+ K   P+    + L +G       +  ++LFRKM 
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 536 IRGL---------LPKGFDKLRTINCAPE 555
           +RG+         L +GF +L  +  A E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKE 443



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 164/371 (44%), Gaps = 35/371 (9%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           K  +A     +M + GF P   +    L  +  S +  +A+   ++M   +I  +    +
Sbjct: 192 KVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYS 251

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC------------------ 309
           +++   CK G ++ A  +F  ME  GF   +  Y TLI G C                  
Sbjct: 252 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR 311

Query: 310 -----------------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
                             +G L  A +    M + GI P+ +T+ +LI GFCK+ +L +A
Sbjct: 312 KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
           N +   M +    PN+ T+N LINGY +    + G  L+ +M   G+  D +TYN LI G
Sbjct: 372 NHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQG 431

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            C+ GK + A  L +++    + P+  +Y  L+ G C     E+A ++++ + +S    +
Sbjct: 432 FCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELD 491

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
             I+ +++   C     D A ++   +  K + PD    + +  GL   G    A  LFR
Sbjct: 492 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551

Query: 533 KMEIRGLLPKG 543
           KME  G  P G
Sbjct: 552 KMEEDGHSPNG 562



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 167/342 (48%), Gaps = 3/342 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           I+ G+    S D    LF+ +    +   +  +++  L + + +  ++ +       M  
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEM--EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
               P + + +  +   +   ++  A   +KEM +  ISP+  T   ++  FCK   +++
Sbjct: 311 RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDK 370

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  +   M S G  P++ T+N LI+G+C   L+   ++    M   G+  + +T+NTLI 
Sbjct: 371 ANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQ 430

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           GFC+ GKL  A  +F EM +  V P++V+Y  L++G    G  E    ++E++ ++ +++
Sbjct: 431 GFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMEL 490

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           DI  YN +I G+C   K   A  L   L    + P+  TY+ +I G C + +   A  L+
Sbjct: 491 DIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLF 550

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
           + M   G  PN   + +L+       D  ++A+ L+E +++C
Sbjct: 551 RKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIKRC 591



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 77/321 (23%), Positives = 151/321 (47%), Gaps = 2/321 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++RG   +  +D  +KL   ++   R      + F  L   +    K R A +   +M 
Sbjct: 287 TLIRGFCYAGRWDDGAKLLRDMIK--RKITPDVVAFSALIDCFVKEGKLREAEELHKEMI 344

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P   +    +       ++D A      M      PN+ T N++++ +CK  +I+
Sbjct: 345 QRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLID 404

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
             +E+F+ M   G +    TYNTLI G C  G L +A +    M    ++P+++++  L+
Sbjct: 405 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G C  G+  +A  IF +++ + +  ++  YN +I+G       +    L+  +   G+K
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D+ TYN +I GLCK+G   +A  L + ++++   PN  TY+ LI       ++ ++ +L
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584

Query: 461 YKSMIRSGCRPNKHIFEMLMS 481
            + + R G   +    +M++ 
Sbjct: 585 IEEIKRCGFSVDASTVKMVVD 605



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 147/297 (49%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D A+  ++EM R+R  P +   + +     +    +  +++ K ME  G   ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+  C    LSLA      + K G +P+ +TF+TLI G C +G++ EA  +   M     
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P ++T N L+NG    G       L + M+  G + + +TY  ++  +CK G+T  A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L++ +++  +  +A  YS +I G C   + + AF L+  M   G + +  I+  L+  FC
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               +D  A++L +M+++ + PD +  S L       GK   A +L ++M  RG+ P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/262 (26%), Positives = 127/262 (48%), Gaps = 3/262 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G    +  D  + + D  L   + C  +   F++L   Y       +  + F +M 
Sbjct: 357 SLIDGFCKENQLDKANHMLD--LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G +    + N  +    +  ++++A   ++EM   R+ P++ +  +++   C  G  E
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           +A+E+F+ +E       +  YN +I G CN   +  A      +   G++P+V T+N +I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G CKKG L EA+ +F +M+    SPN  TYN LI  +   G++   A L EE+ R G  
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFS 594

Query: 401 VDILTYNALILGLCKEGKTKKA 422
           VD  T   +++ +  +G+ KK+
Sbjct: 595 VDASTVK-MVVDMLSDGRLKKS 615



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 119/279 (42%)

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           + AV++F+ M      P +  ++ L S         L +     ME  GI  N+ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I   C+  KL  A     ++      P+ VT++TLING    G       L + M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K  ++T NAL+ GLC  GK   A  L+  + +    PN  TY  ++   C    +  A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L + M     + +   + +++   C++   D A  +  EM  K    D II + L  G  
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
           + G+ +   KL R M  R + P        I+C  + G+
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%)

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           K  +A  +F EM  +   P ++ ++ L +   +    ++   L ++M   GI  ++ T +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            +I   C+  K   A   +  + K    P+  T+S LI G C+      A +L   M+  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G +P       L++  C N     A  ++  M+E    P+ +    +   +   G+  LA
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 528 MKLFRKMEIR 537
           M+L RKME R
Sbjct: 232 MELLRKMEER 241


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/372 (29%), Positives = 188/372 (50%), Gaps = 7/372 (1%)

Query: 176 SKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           S L D++   +RM    PL     F  LFKT  + K +      F +MR  G +PI +S 
Sbjct: 41  SCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILG-IPISDSI 99

Query: 232 -NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
            N   +S     R+D A        +  I  NV T N ++        +  AV +FK + 
Sbjct: 100 LNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159

Query: 291 SMGFI-PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
                 P+   Y T+++G   +G     +    +ME+   +P+V T++ +I   CK   L
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A  + +EMK  N+ PN+ TYN+LI+G  ++G  E   +L  EM+   I  ++ T++ L
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
           I GLCKEGK + A  +++ + +  + P+  TYSA++ G C+R   +RA +++  +   G 
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339

Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
           +PN   + +L++ +C+ ++  +A ++  E+ +K + PD++  S +  GL   G+   A K
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 530 LFRKMEIRGLLP 541
           +F +M   G  P
Sbjct: 400 IFDEMLRVGPTP 411



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 171/348 (49%), Gaps = 6/348 (1%)

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +   +M+     P I + N  +  L    + +       EM    I+PNV+T ++++ 
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281

Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
             CK G +E A EV ++M   G  P + TY+ ++ G+C +G +  A +  N++   GI+P
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341

Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
           N+ +++ LI G+CKK  L +A ++F E+    + P+ VTY+T+++G  +VG       ++
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIF 401

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           +EMLR G   DI  ++ L+ G  K G  ++A  L   L++N    N S Y+ +I G C  
Sbjct: 402 DEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKN 461

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
                A  +++ +   G  P+   + ++++ FC+   FD    +L +M +     ++I  
Sbjct: 462 DRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITY 521

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT---INCAPEN 556
           + +  G     K    +   ++M  RG     FD   T   IN   EN
Sbjct: 522 NVIMQGFFRSNKISEIVSFMKEMAGRGF---SFDATTTGVLINVLKEN 566



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 152/319 (47%), Gaps = 3/319 (0%)

Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           +D A+  +  M R +  P+V   + +      +      V +F+ M  +G   S +  N 
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           + + +C +  +  A     +  K GI  NV+TFNTL+ G   + K+ +A  +F ++    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 364 V-SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
           +  PN V Y T++NG  + G++E   SL   M +   K D+ TY+ +I  LCK+     A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L+ ++ + ++ PN  TY++LI G C     E+   L   M+     PN H F +L+  
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
            C+    + A EV+  M+EK + PD I  S +  G    G+ + A ++F  +  +G+ P 
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 543 GFDKLRTIN--CAPENGEK 559
            F     IN  C  +N  K
Sbjct: 343 IFSYSILINGYCKKKNLAK 361



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 124/252 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F +L        K  +A +    M + G  P I + +  +       +VD A   +  +R
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I PN+++ +++++ +CK   + +A+++F  +   G  P   TY+T++ G    G + 
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A K  + M + G  P++   +TL+FG+ K G + EA  +FS+++      N+  Y  +I
Sbjct: 396 DAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVI 455

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  +        +++E++   G+  D+ TYN +I G C+EG   +   +++ ++ N   
Sbjct: 456 NGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCP 515

Query: 436 PNASTYSALITG 447
            N  TY+ ++ G
Sbjct: 516 ANNITYNVIMQG 527



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 142/306 (46%), Gaps = 18/306 (5%)

Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
           + T SI++  L K  K + ++ ++R +++                  +  +   + +  +
Sbjct: 273 VHTFSILIDGLCKEGKVEDADEVMRHMIE------------------KGVEPDIITYSAI 314

Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
              Y  R +   A   F  +RD G  P I S +  ++     + +  A+  + E+ +  +
Sbjct: 315 MDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGL 374

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
            P+  T + ++H   ++G I  A ++F  M  +G  P +  ++TL+ G+   GL+  AM 
Sbjct: 375 KPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAML 434

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             + +E+N    N+  +  +I G CK  ++ EA+ IF ++ +  + P+V TYN +I G+ 
Sbjct: 435 LFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC 494

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
           + G  +    +  +M  NG   + +TYN ++ G  +  K  +    +K++       +A+
Sbjct: 495 REGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDAT 554

Query: 440 TYSALI 445
           T   LI
Sbjct: 555 TTGVLI 560



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 77/169 (45%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +  +A   F +M   G  P I   +  L        V+ A+  + ++ RNR   N+    
Sbjct: 393 RIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYT 452

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
           +V++  CK   +  A  +F+ + S+G IP V TYN +I+G C +GL          ME N
Sbjct: 453 VVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDN 512

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
           G   N IT+N ++ GF +  K+ E      EM     S +  T   LIN
Sbjct: 513 GCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 172/343 (50%), Gaps = 2/343 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + ++ +     ++   A      M+  G    + +    +  L D+  +D AL    EM 
Sbjct: 118 YTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMC 177

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
            + + PNV   + ++  +C+ G  +   +VF+ M  +G  P V  +   I   C KG + 
Sbjct: 178 GSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIG 237

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+K K++M + G++PNV+T+N LI   CK+G + EA  + +EM    V+P+VVTYNTLI
Sbjct: 238 KAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLI 297

Query: 376 NGYGQVGNSEMGASLYEEMLRNG--IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
            G   V   +    L EEM++    ++ D++T+N++I GLCK G+ ++A  + + + +  
Sbjct: 298 AGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERG 357

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
            + N  TY+ LI G         A  L   +I SG  P+   + +L++ F +  + DRA 
Sbjct: 358 CMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAE 417

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEI 536
             L  M ++ +  +      L + L   G  E AM LF +M++
Sbjct: 418 MFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDM 460



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 186/395 (47%), Gaps = 15/395 (3%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKFRNATDTF 216
           +++RG+ D+   D   +L         MC S      +V+  L + Y    ++++ +  F
Sbjct: 155 TLIRGLCDAAELDGALELLGE------MCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVF 208

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
            +M   G  P +     F+  L    R+  A+     M +  + PNV T N++++  CK 
Sbjct: 209 EEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKE 268

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG--IQPNVI 334
           G +  A+ +   M+  G  P V TYNTLI+G      +  AM     M +    ++P+V+
Sbjct: 269 GSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVV 328

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           TFN++I G CK G++ +A  +   M       N+VTYN LI G+ +V    M  +L  E+
Sbjct: 329 TFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSEL 388

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
           + +G++ D  TY+ LI G  K  +  +A   ++ + +  +      Y  L+   C     
Sbjct: 389 ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMM 448

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E+A  L+  M    C  +   +  +M   C++ D   A ++L +ML++ +APD++  S L
Sbjct: 449 EQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSIL 507

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP--KGFDKL 547
            +     G  E A ++ ++M   G +P    FD L
Sbjct: 508 INMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSL 542



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%), Gaps = 5/303 (1%)

Query: 247 ALGFYKEMRRNR---ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
           AL    +M R       PN  +  MVM   C     + AV + ++M++ G    V TY T
Sbjct: 96  ALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGT 155

Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           LI G C+   L  A++    M  +G+ PNVI ++ L+ G+C+ G+  + +++F EM    
Sbjct: 156 LIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLG 215

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           V P+V+ +   I+   + G       + + M++ G++ +++TYN LI  LCKEG  ++A 
Sbjct: 216 VEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREAL 275

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPNKHIFEMLMS 481
            L  ++D   + P+  TY+ LI G       + A  L + MI+      P+   F  ++ 
Sbjct: 276 ALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIH 335

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             C+     +A  V   M E+    + +  + L  G     K  +AM L  ++   GL P
Sbjct: 336 GLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEP 395

Query: 542 KGF 544
             F
Sbjct: 396 DSF 398



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 149/312 (47%), Gaps = 2/312 (0%)

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           +  L  S R D A+   + M+ + +  +V T   ++   C    ++ A+E+   M   G 
Sbjct: 122 MRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGV 181

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
            P+V  Y+ L+ G+C  G      K    M + G++P+VI F   I   CKKG++ +A +
Sbjct: 182 HPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVK 241

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +   M    + PNVVTYN LIN   + G+     +L  EM   G+  D++TYN LI GL 
Sbjct: 242 VKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLS 301

Query: 415 KEGKTKKAAYLVKDL-DKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
              +   A  L++++   ++LV P+  T++++I G C      +A  + + M   GC  N
Sbjct: 302 GVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCN 361

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              +  L+  F +    + A  ++ E++   + PDS   S L +G     + + A    R
Sbjct: 362 LVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLR 421

Query: 533 KMEIRGLLPKGF 544
            M  RG+  + F
Sbjct: 422 TMTQRGIRAELF 433



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 124/261 (47%), Gaps = 7/261 (2%)

Query: 281 RAVEVFKNMESMGFIPSV---TTYNTLISGHCNKGL-LSLAMKFKNLMEKNG---IQPNV 333
           RA  V +    +  +P V    +YN +++  C +G  L  A+     M +      +PN 
Sbjct: 56  RAAPVTEACSLLSALPDVRDAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNA 115

Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
           +++  ++ G C   +  EA  +   M+A+ V  +VVTY TLI G       +    L  E
Sbjct: 116 VSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGE 175

Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
           M  +G+  +++ Y+ L+ G C+ G+ +  + + +++ +  + P+   ++  I   C +  
Sbjct: 176 MCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGR 235

Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
             +A ++   M++ G  PN   + +L++  C+      A  +  EM +K +APD +  + 
Sbjct: 236 IGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNT 295

Query: 514 LYSGLHHCGKDELAMKLFRKM 534
           L +GL    + + AM L  +M
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEM 316



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 1/220 (0%)

Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
           + + R C  + + ++ L   +    K   A +   ++   G  P   + +  ++      
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLW 411

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
            VD A  F + M +  I   ++    ++ A C+LG++E+A+ +F  M+    + +V  Y+
Sbjct: 412 EVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVA-YS 470

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           T++ G C  G +  A +    M   G+ P+ +T++ LI  F K G L EA R+  +M A+
Sbjct: 471 TMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAAS 530

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
              P+V  +++LI GY   G       L  EM    + +D
Sbjct: 531 GFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 4/195 (2%)

Query: 367 NVVTYNTLINGYGQVGNS-EMGASLYEEMLRNG---IKVDILTYNALILGLCKEGKTKKA 422
           + V+YN ++    + G       SL  +M R      + + ++Y  ++ GLC   +T +A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
             L++ +  + +  +  TY  LI G C     + A +L   M  SG  PN  ++  L+  
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           +C++  +   ++V  EM    + PD I+ +     L   G+   A+K+   M  RGL P 
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 543 GFDKLRTINCAPENG 557
                  INC  + G
Sbjct: 255 VVTYNVLINCLCKEG 269


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 178/376 (47%), Gaps = 9/376 (2%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSS---PLVFDLLFKTYAHRKKFRNATDTFCQ 218
           +++G+L+   +     LF        M DS       +++L      R+K R A + + +
Sbjct: 358 VIKGLLNDKLWKDAVSLFK------EMADSGIPDAFTYNILIHWLCQRRKIREALNLWEK 411

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + G  P I + +  L     +  +D A+  Y EM     +PNV T   +M        
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
            ++A  +   M+  G   +  TYNTLI+G C  G +    +     E  G  P  +T+N+
Sbjct: 472 FDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNS 531

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           +I GF K G +  A  ++ +M A  + PN+VTY + I+GY +    ++   +  ++   G
Sbjct: 532 IINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKG 591

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++ DI  YN+LI G C+EG    A  ++  + K+ L+PN S Y++ ITG    K  E A 
Sbjct: 592 LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEAL 651

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           + Y+ MI+ G   +   +  L+  F ++ +   A ++  EM+ K   PD I  + L  GL
Sbjct: 652 RFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGL 711

Query: 519 HHCGKDELAMKLFRKM 534
              G  + A KL  +M
Sbjct: 712 CRNGDIDDARKLLDEM 727



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 189/400 (47%), Gaps = 18/400 (4%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T++I++H L + RK +            ++ +L  K+ ++ +  Y       + +  L  
Sbjct: 388 TYNILIHWLCQRRKIR------------EALNLWEKMNETGVKPY------IVTYHSLLL 429

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y        A   + +M   GF P + +    +   ++    D A     EM++N +S 
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           N YT N +++  C +G +    E+ K  E+ GF+P+  TYN++I+G    G++  A    
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M   GI PN++T+ + I G+CK      A ++ ++++   + P++  YN+LI G+ Q 
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQE 609

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           GN      +   ML++G+  +I  YN+ I G       ++A    + + K  +  + +TY
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATY 669

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G     N   A +LY  M+  G  P+   F  L    C+N D D A ++L EM  
Sbjct: 670 TTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNR 729

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             + P+ ++ + L +G    GK + A +L  +M  R ++P
Sbjct: 730 LDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMP 769



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 5/291 (1%)

Query: 253 EMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG 312
           EMR      + +  ++VM A  K G+ + AV +F  M +    P     +  I+  C   
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 313 LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
             + A+     M+  G  P   TFN+++    K G++ EA  I  E+ AT    +VV   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL++GY           ++EE LR+G+    +TY  LI G  +EG  +KA  L + +  +
Sbjct: 287 TLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDH 346

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
            L+P+ + ++ +I G    K  + A  L+K M  SG  P+   + +L+   CQ      A
Sbjct: 347 GLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREA 405

Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
             +  +M E  + P  +    L   L +C  G  + A+KL+ +M  +G  P
Sbjct: 406 LNLWEKMNETGVKPYIVTYHSLL--LCYCVNGCMDEAVKLYTEMPGKGFTP 454


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 181/367 (49%), Gaps = 6/367 (1%)

Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFL--PIIESCNKF 234
           ++F+S   S R C+ + + +  L      + K  +A   F +M D G    PII +    
Sbjct: 441 RIFESA--SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYT--SL 496

Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
           + +     R +     YKEM R    P++  LN  M    K G +E+   +F++M+S GF
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556

Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
           +P V +Y+ LI G    G           M + G   +   +N ++ G CK GK+ +A  
Sbjct: 557 LPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616

Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
           +  EMK  +V P V TY ++++G  ++   +    L+EE    GI+++++ Y++LI G  
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676

Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
           K G+  +A  +++++ K  L PN  T+++L+      +  + A   ++SM    C PN +
Sbjct: 677 KVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736

Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
            + +L++  C+ + +++A     EM ++ + P+ +  + + SGL   G    A  LF + 
Sbjct: 737 TYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERF 796

Query: 535 EIRGLLP 541
           +  G +P
Sbjct: 797 KTNGGIP 803



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 177/378 (46%), Gaps = 2/378 (0%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      D   +LF+ +L +    D++P+++  L + +    +  +    + +M 
Sbjct: 460 SLIDGLGKKGKIDDAYRLFEKMLDAGH--DANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
             G  P +   N ++  +  +  V+     +++M+     P+V + ++++H   K G   
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
               +F+ M   GF      YN ++ G C  G +  A +    M+   + P V T+ +++
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
            G  K  +L EA  +F E K+  +  NV+ Y++LI+G+G+VG  +    + EEM++ G+ 
Sbjct: 638 DGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 697

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            ++ T+N+L+  L K  +  +A    + + +    PN  TYS LI G C  +   +AF  
Sbjct: 698 PNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVF 757

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
           ++ M + G  PN   +  ++S   +  +   A  +          PDS   + L  G+ +
Sbjct: 758 WQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSN 817

Query: 521 CGKDELAMKLFRKMEIRG 538
             +   A ++F +  +RG
Sbjct: 818 ANRPMEAYQVFEETRLRG 835



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/368 (25%), Positives = 172/368 (46%), Gaps = 10/368 (2%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            ++ +   Y   ++F +A     ++R+ G +P + S N  L+ L    +VD AL  +  M
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           +++   PN+ T N+++   C  G +  A ++   ME  G  P++ + N ++   C    L
Sbjct: 378 KKD-AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQL 436

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +      + G  PN +T+ +LI G  KKGK+ +A R+F +M       N + Y +L
Sbjct: 437 EEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSL 496

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I  +   G  E G  +Y+EM+R G + D+   N  +  + K G+ +K   + +D+     
Sbjct: 497 IRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGF 556

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P+  +YS LI G      +     ++++M + G   +   +  ++   C++   D+A E
Sbjct: 557 LPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL---------LPKGFD 545
           VL EM  K + P       +  GL    + + A  LF + + +G+         L  GF 
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676

Query: 546 KLRTINCA 553
           K+  I+ A
Sbjct: 677 KVGRIDEA 684



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/336 (24%), Positives = 155/336 (46%), Gaps = 1/336 (0%)

Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
           L  T    ++  +A      MR   F P   +    + +L ++ + + AL   ++M+   
Sbjct: 147 LVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVG 206

Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
              +V     ++ A  + G +E A+ +   ++     P +  YN  I      G + +A 
Sbjct: 207 YEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAW 266

Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
           KF + ++ +G++P+ +++ ++++  CK G+L EA  +F +M+A    P    YNT+I GY
Sbjct: 267 KFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326

Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
           G     +    L E +   G    ++++N+++  L K+ K  +A  L  D+ K    PN 
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLF-DVMKKDAKPNI 385

Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
           STY+ +I   C+      A+++   M  +G  PN     +++   C+    + A  +   
Sbjct: 386 STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES 445

Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
             E+   P+S+    L  GL   GK + A +LF KM
Sbjct: 446 ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 138/300 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L        + R  ++ F  M   GF     + N  +  L  S +VD A    +EM+
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMK 622

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + P V T   ++    K+  ++ A  +F+  +S G   +V  Y++LI G    G + 
Sbjct: 623 VKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRID 682

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A      M K G+ PNV T+N+L+    K  ++ EA   F  MK    SPN  TY+ LI
Sbjct: 683 EAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILI 742

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG  +V         ++EM + G+  +++TY  +I GL K G    A  L +    N  +
Sbjct: 743 NGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGI 802

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P++++++ALI G         A+Q+++     GCR N      L+    + E  ++AA V
Sbjct: 803 PDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIV 862



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 180/410 (43%), Gaps = 38/410 (9%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G   ++ FD   KL + +    R C  S + F+ +      ++K   A   F  M+
Sbjct: 321 TMIMGYGSAERFDDAYKLLERL--RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK 378

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
                P I + N  +  L  + RV+ A     EM    + PN+ ++N+++   CK   +E
Sbjct: 379 KDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
            A  +F++    G  P+  TY +LI G   KG +  A +    M   G   N I + +LI
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 341 FGF---------------------------------C--KKGKLHEANRIFSEMKATNVS 365
             F                                 C  K G++ +   IF +MK+    
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+V +Y+ LI+G  + G +   +++++ M + G  +D   YNA++ GLCK GK  KA  +
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           ++++    + P  +TY +++ G       + A+ L++     G   N  ++  L+  F +
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGK 677

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
               D A  +L EM++K + P+    + L   L    + + A+  F+ M+
Sbjct: 678 VGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK 727



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/369 (22%), Positives = 169/369 (45%), Gaps = 3/369 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            + +L    A  ++   A +   QM+D G+   +      + +L    +++ AL    E+
Sbjct: 178 AYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEV 237

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           + + + P++   N+ +  F K G ++ A + F  +++ G  P   +Y +++   C  G L
Sbjct: 238 KGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRL 297

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +    ME     P    +NT+I G+    +  +A ++   ++     P+VV++N++
Sbjct: 298 GEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSI 357

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           +   G+    +   +L++ M ++  K +I TYN +I  LC  G+  +A  +  +++   L
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            PN  + + ++   C     E A ++++S    GC PN   +  L+    +    D A  
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRT-INCA 553
           +  +ML+     + II + L       G+ E   K++++M  RG  P     L T ++C 
Sbjct: 477 LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPD-LTLLNTYMDCV 535

Query: 554 PENGEKESG 562
            + GE E G
Sbjct: 536 FKAGEVEKG 544



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/263 (24%), Positives = 126/263 (47%), Gaps = 1/263 (0%)

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
           +E A  V   M  + F P  + Y  LI           A++    M+  G + +V  F T
Sbjct: 157 LEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTT 216

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
           L+    ++G++  A  +  E+K + + P++V YN  I+ +G+ G+ +M    + E+  +G
Sbjct: 217 LVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG 276

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
           ++ D ++Y +++  LCK G+  +A  L   ++    VP A  Y+ +I G    +  + A+
Sbjct: 277 LRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAY 336

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           +L + +   GC P+   F  +++   +    D A   L ++++K   P+    + +   L
Sbjct: 337 KLLERLRERGCIPSVVSFNSILTCLGKKRKVDEAL-TLFDVMKKDAKPNISTYNIIIDML 395

Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
              G+   A K+  +ME+ GL P
Sbjct: 396 CMAGRVNEAYKIRDEMELAGLFP 418



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/150 (22%), Positives = 62/150 (41%)

Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
           EEM   G  +      AL+  L +  + + A  ++  +      P  S Y+ LI      
Sbjct: 130 EEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEA 189

Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
           +  ERA +L + M   G   +  +F  L+    +    + A  ++ E+   C+ PD ++ 
Sbjct: 190 RQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLY 249

Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +         G  ++A K F +++  GL P
Sbjct: 250 NVCIDCFGKAGSVDMAWKFFHELKAHGLRP 279


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 182/356 (51%)

Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           H  KF +A   FC M +   LP I   ++ L ++   ++ +  +  ++ +    IS ++Y
Sbjct: 50  HSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
           + + ++  FC+   +  A+     M  +GF PS+ T+ +L++G C+   +  AM   + +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
              G +PNV+ +NT+I   C+  ++  A  + + M+   + P+V+TYN+LI      G  
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
            + A +  +M+R GI  D++T++A+I    KEG+  +A     ++ + S+ PN  TY++L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           I G C+    + A ++   M+  G  PN   +  L++ +C+++  D A ++L  M    +
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
             D+   + LY G    G+   A K+  +M   G+LP  +     ++   E+G+ E
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIE 405



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/356 (28%), Positives = 169/356 (47%), Gaps = 4/356 (1%)

Query: 177 KLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
           K  D++     M +S PL     F  L    A  KK+      F  +   G    + S +
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
             +       R+ +AL    +M +    P++ T   +++ FC +  I+ A+ +   +  +
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           G+ P+V  YNT+I   C    +  A+   N MEK GI+P+VIT+N+LI      GK   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            RI S+M    + P+V+T++ +I+ +G+ G        Y+EM++  +  +I+TYN+LI G
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
           LC  G   +A  ++  +      PNA TY+ L+ G C  K  + A ++   M   G   +
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGD 352

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
              +  L   +CQ   F+ A +VL  M+   + PD    + L  GL   GK E A+
Sbjct: 353 TFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL 408



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 141/287 (49%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           ++++ +  +    ++   A D    M   G  P + + N  ++ L  S +  ++     +
Sbjct: 179 VIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSD 238

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M R  I P+V T + ++  F K G +  A + +  M      P++ TYN+LI+G C  GL
Sbjct: 239 MMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL 298

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A K  N M   G  PN +T+NTL+ G+CK  ++ +A +I   M    V  +  TYNT
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           L  GY Q G       +   M+  G+  DI T+N L+ GLC+ GK +KA   ++DL K+ 
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSE 418

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            V    TY+ +I G C     E A+ L+ S+   G  P+   +  +M
Sbjct: 419 TVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMM 465



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 165/347 (47%), Gaps = 2/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F  L   +    +   A     +M   GF P I +    ++      R+  A+    ++ 
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV 170

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                PNV   N ++ + C+   ++ A++V  +ME MG  P V TYN+LI+   + G   
Sbjct: 171 GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWG 230

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
           ++ +  + M + GI P+VITF+ +I  F K+G+L EA + + EM   +V PN+VTYN+LI
Sbjct: 231 VSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLI 290

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NG    G  +    +   M+  G   + +TYN L+ G CK  +   A  ++  +  + + 
Sbjct: 291 NGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVD 350

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
            +  TY+ L  G C       A ++   M+  G  P+ + F ML+   C++   ++A  V
Sbjct: 351 GDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKAL-V 409

Query: 496 LLEMLEKCMAPDSIILSE-LYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            LE L+K      II    +  G+    K E A  LF  + ++G+ P
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSP 456



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 164/353 (46%), Gaps = 1/353 (0%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
           + S + F  L   + H  + + A     Q+   G+ P +   N  + SL ++ +VD AL 
Sbjct: 140 EPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALD 199

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
               M +  I P+V T N ++      G    +  +  +M  MG  P V T++ +I    
Sbjct: 200 VLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFG 259

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +G L  A K  + M +  + PN++T+N+LI G C  G L EA ++ + M +    PN V
Sbjct: 260 KEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAV 319

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
           TYNTL+NGY +    +    +   M  +G+  D  TYN L  G C+ G+   A  ++  +
Sbjct: 320 TYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379

Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
               ++P+  T++ L+ G C     E+A    + + +S        + +++   C+    
Sbjct: 380 VSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKV 439

Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM-EIRGLLP 541
           + A  +   +  K ++PD I  + +  GL        A +L+RKM +  GL+P
Sbjct: 440 EDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 187/386 (48%), Gaps = 37/386 (9%)

Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
           + A     ++R    LP   +CNK +  L++S    ++L F   +     +P+  + N V
Sbjct: 3   KEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSV 62

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNG 328
           +   CKLG ++ AV++  +M   G  P V +YN+LI GHC  G + S  +  ++L    G
Sbjct: 63  VSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYG 122

Query: 329 I------------------------------------QPNVITFNTLIFGFCKKGKLHEA 352
                                                 PNV+T++T I  FCK G+L  A
Sbjct: 123 FTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLA 182

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
            + F+ MK   + PNVVT+  LI+GY + G+ E+  SLYEEM R  + ++++TY ALI G
Sbjct: 183 LKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDG 242

Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
            CK+G+ ++A  +   + ++ + PN+  Y+ +I G   R +S+ A +    M+  G R +
Sbjct: 243 FCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLD 302

Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
              + +++S  C       A E++ +M +  + PD +I + + +     G+ + A+ ++ 
Sbjct: 303 ITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYH 362

Query: 533 KMEIRGLLPKGFDKLRTINCAPENGE 558
           K+  RG  P        I+   +NG+
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQ 388



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 171/384 (44%), Gaps = 34/384 (8%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR-DYGFL--PIIESCNKFLSSLLDSERVD 245
           C+   + ++ L   +      R+A      +R  YGF   P I S N   +     + +D
Sbjct: 87  CEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLD 146

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
               +   M +   SPNV T +  +  FCK G ++ A++ F  M+     P+V T+  LI
Sbjct: 147 EVFVYMGVMLKC-CSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLI 205

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
            G+C  G L + +     M +  +  NV+T+  LI GFCKKG++  A  ++  M    V 
Sbjct: 206 DGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVE 265

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN + Y T+ING+ Q G+S+       +ML  G+++DI  Y  +I GLC  GK K+A  +
Sbjct: 266 PNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEI 325

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP-------------- 471
           V+D++K  LVP+   ++ ++         + A  +Y  +I  G  P              
Sbjct: 326 VEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385

Query: 472 ----------------NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
                           N  ++ +L+   C+ EDF     +  ++ E  + PD  + +   
Sbjct: 386 NGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWI 445

Query: 516 SGLHHCGKDELAMKLFRKMEIRGL 539
           +GL   G    A KL  KM   GL
Sbjct: 446 AGLCKQGNLVDAFKLKTKMVQEGL 469



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/383 (23%), Positives = 162/383 (42%), Gaps = 30/383 (7%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           + C  + + +      +    + + A  +F  M+     P + +    +     +  +++
Sbjct: 157 KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEV 216

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
            +  Y+EMRR R+S NV T   ++  FCK G ++RA  ++  M      P+   Y T+I+
Sbjct: 217 VVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIIN 276

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G   +G    AMKF   M   G++ ++  +  +I G C  GKL EA  I  +M+  ++ P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVP 336

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT--------------------- 405
           +++ + T++N Y + G  +   ++Y +++  G + D++                      
Sbjct: 337 DMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF 396

Query: 406 ---------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
                    Y  LI  LCKE    +   L   + +  LVP+   Y++ I G C + N   
Sbjct: 397 CTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           AF+L   M++ G   +   +  L+           A +V  EML   + PDS +   L  
Sbjct: 457 AFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIR 516

Query: 517 GLHHCGKDELAMKLFRKMEIRGL 539
                G    A  L   M+ RGL
Sbjct: 517 AYEKEGNMTTASDLLLDMQTRGL 539



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 128/261 (49%), Gaps = 5/261 (1%)

Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
           D A+ F  +M    +  ++    +++   C +G ++ A E+ ++ME    +P +  + T+
Sbjct: 285 DNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTM 344

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           ++ +   G +  A+   + + + G +P+V+  +T+I G  K G+LHEA   F   KA   
Sbjct: 345 MNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKA--- 401

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
             N V Y  LI+   +  +      L+ ++   G+  D   Y + I GLCK+G    A  
Sbjct: 402 --NDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFK 459

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           L   + +  L  +   Y+ LI G   +     A Q++  M+RSG  P+  +F++L+  + 
Sbjct: 460 LKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYE 519

Query: 485 QNEDFDRAAEVLLEMLEKCMA 505
           +  +   A+++LL+M  + +A
Sbjct: 520 KEGNMTTASDLLLDMQTRGLA 540



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 129/300 (43%), Gaps = 39/300 (13%)

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           +++ A++    +     +P   T N  I    N    +L++KF   +   G  P+  +FN
Sbjct: 1   MVKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFN 60

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           +++   CK G++  A  I   M      P+V++YN+LI+G+ + G+    A L  E LR 
Sbjct: 61  SVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR-SACLVLESLRA 119

Query: 398 G----IKVDILTYNALILG----------------------------------LCKEGKT 419
                 K DI+++N L  G                                   CK G+ 
Sbjct: 120 SYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGEL 179

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           K A      + +++L PN  T++ LI G C   + E    LY+ M R     N   +  L
Sbjct: 180 KLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTAL 239

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  FC+  +  RA  + L MLE  + P+S++ + + +G    G  + AMK   KM  +G+
Sbjct: 240 IDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGM 299


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 214/497 (43%), Gaps = 84/497 (16%)

Query: 126 FFTWVQTHKPSSLTLETH----SIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
           FF W QT  P +   ++     S+V  +L+ + KF  ++S+L   + +    L   L +S
Sbjct: 61  FFQWAQTSIPEAFPSDSPLPLISVVRSLLS-HHKFADAKSLLVSYIRTSDASL--SLCNS 117

Query: 182 ILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
           +L+        P   +FD+    Y H  K   A   F +M      P + +CN  L  L+
Sbjct: 118 LLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV 177

Query: 240 ---DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC-------KLGIIERAVEVFK-- 287
               S  +  A   + +M +  +S NV T N++++ +C        LG++ER V  FK  
Sbjct: 178 RYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVN 237

Query: 288 ---------------------------NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
                                      +M+  G +P+  TYN L+ G+C  G L  A + 
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
             LM++  + P++ T+N LI G C  G + E   +   MK+  + P+VVTYNTLI+G  +
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKNSLVPNAS 439
           +G S     L E+M  +G+K + +T+N  +  LCKE K +     VK+L D +   P+  
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL--- 496
           TY  LI       +   A ++ + M + G + N      ++   C+    D A  +L   
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477

Query: 497 ----------------------------LEMLEKC----MAPDSIILSELYSGLHHCGKD 524
                                       LEM ++     + P     + L  GL H GK 
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537

Query: 525 ELAMKLFRKMEIRGLLP 541
           ELAM+ F ++   GLLP
Sbjct: 538 ELAMEKFDELAESGLLP 554



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 143/274 (52%), Gaps = 5/274 (1%)

Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
           SP++ T + ++ A+ K+G +  A+E+ + M   G   +  T NT++   C +  L  A  
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472

Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
             N   K G   + +T+ TLI GF ++ K+ +A  ++ EMK   ++P V T+N+LI G  
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532

Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
             G +E+    ++E+  +G+  D  T+N++ILG CKEG+ +KA     +  K+S  P+  
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592

Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
           T + L+ G C    +E+A   + ++I      +   +  ++S FC+++    A ++L EM
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651

Query: 500 LEKCMAPDSIILSELYSGLHHCGK----DELAMK 529
            EK + PD    +   S L   GK    DEL  K
Sbjct: 652 EEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 170/364 (46%), Gaps = 2/364 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +++L     +    R   +    M+     P + + N  +    +      A    ++M 
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM-GFIPSVTTYNTLISGHCNKGLL 314
            + +  N  T N+ +   CK    E      K +  M GF P + TY+TLI  +   G L
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S A++    M + GI+ N IT NT++   CK+ KL EA+ + +         + VTY TL
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I G+ +    E    +++EM +  I   + T+N+LI GLC  GKT+ A     +L ++ L
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           +P+ ST++++I G C     E+AF+ Y   I+   +P+ +   +L++  C+    ++A  
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAP 554
               ++E+    D++  + + S      K + A  L  +ME +GL P  F     I+   
Sbjct: 613 FFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671

Query: 555 ENGE 558
           E+G+
Sbjct: 672 EDGK 675



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 1/161 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F+ L     H  K   A + F ++ + G LP   + N  +       RV+ A  FY E  
Sbjct: 524 FNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESI 583

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           ++   P+ YT N++++  CK G+ E+A+  F  +     + +VT YNT+IS  C    L 
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVT-YNTMISAFCKDKKLK 642

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            A    + ME+ G++P+  T+N+ I    + GKL E + + 
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 91/220 (41%), Gaps = 26/220 (11%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+      +L  + FD +  S  + D S   F+ +   Y    +   A + + +  
Sbjct: 526 SLIGGLCHHGKTELAMEKFDELAESGLLPDDS--TFNSIILGYCKEGRVEKAFEFYNESI 583

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            + F P   +CN  L+ L      + AL F+  +   R   +  T N ++ AFCK   ++
Sbjct: 584 KHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLK 642

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS--------LAMKFKNL-------ME 325
            A ++   ME  G  P   TYN+ IS     G LS         + KF ++        E
Sbjct: 643 EAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVETE 702

Query: 326 KN--------GIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
           KN         +    I ++ +I   C +G+L E +R ++
Sbjct: 703 KNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYT 742


>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
 gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
          Length = 321

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 142/281 (50%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P V T  +++   CK   +  A E+ + M   G  P+   +N ++   C +G  + A  +
Sbjct: 8   PTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAYGY 67

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M   G+ P ++T+N LI GFCK+ KLH A  I  EM      PN VTYNT ++G  +
Sbjct: 68  IETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCK 127

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  +   +L+  M    I++D+  Y  LI GLC+ GK  +A  L+ +++ +  VP    
Sbjct: 128 YGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGC 187

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+A+++  C       A +L+K M  SG  P+   F M++  +C+    D A  +L +M 
Sbjct: 188 YNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMK 247

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              +AP  +I + L   L+  G+   A +L ++M  RGL P
Sbjct: 248 SAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSP 288



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/290 (28%), Positives = 136/290 (46%)

Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
           M + G +P + +    +  L  + R+  A    + M      PN    N +M A CK G 
Sbjct: 1   MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGR 60

Query: 279 IERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
              A    + M SMG  P++ TYN LI G C +  L  A++    M   G +PN +T+NT
Sbjct: 61  SAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNT 120

Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
            + G CK GK+ +A  +F  M    +  +V  Y TLI+G  Q G      SL +EM  +G
Sbjct: 121 FLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSG 180

Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
                  YNA++  LCK  +  +A  L K +  + ++P+  T+  ++ G C     + A 
Sbjct: 181 CVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDAL 240

Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
            L + M  +G  P + I+  L+    +      A  +L EM+ + ++P+S
Sbjct: 241 LLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNS 290



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 130/291 (44%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + F +L        +  +A +    M + G  P     N  + +L    R   A 
Sbjct: 6   CIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCFPNALVFNGIMDALCKEGRSAEAY 65

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G+ + MR   +SP + T N+++  FCK   + RA+E+ + M   G  P+  TYNT + G 
Sbjct: 66  GYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGL 125

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A+     M +  I+ +V  + TLI G C+ GKL EA  +  EM+ +   P  
Sbjct: 126 CKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKP 185

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
             YN +++   +         L++ M  +GI  D LT+  ++ G C+  +   A  L++ 
Sbjct: 186 GCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQ 245

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           +    L P    Y+ LI           A++L + MI  G  PN   + ++
Sbjct: 246 MKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 6/274 (2%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           +D+F+L   + +      R C  + LVF+ +        +   A      MR  G  P I
Sbjct: 27  TDAFELVEVMAE------RGCFPNALVFNGIMDALCKEGRSAEAYGYIETMRSMGVSPTI 80

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            + N  +      E++  AL   +EM      PN  T N  +H  CK G ++ A+ +F+ 
Sbjct: 81  VTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDDALALFRA 140

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M        V  Y TLI G C  G L+ A    + ME +G  P    +N ++   CK  +
Sbjct: 141 MTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILSWLCKGSR 200

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           ++EA+++F  M  + + P+ +T+  ++ GY +    +    L ++M   G+    + YN 
Sbjct: 201 INEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAPREVIYNT 260

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
           LI  L + G+  +A  L++++    L PN+ TY+
Sbjct: 261 LIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYA 294


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 38/348 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL--GIIERAVEVFKNM 289
           NK L+S+   +     L    +M    I PN+YTL++++++FC L  G I  A+ +F  M
Sbjct: 65  NKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKM 124

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
              GF P V TY TLI+G C  G  S A++    M +   QPNV  +NT+I   CK  ++
Sbjct: 125 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 184

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +FSEM    +SP++ TYN+LI+    +   +  A+L  EM+ + I  D++++N +
Sbjct: 185 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 244

Query: 410 ILGLCKEGKT------------------------------------KKAAYLVKDLDKNS 433
           +  LCKEGK                                      KA YL  ++ +  
Sbjct: 245 VDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 304

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           L+P+  TYS LI G C  +  + A  L+  M+     PN   + +L+   C+N     A 
Sbjct: 305 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 364

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            +L  +    + PD  + +    G+   G+ E A  LF  +  +GL P
Sbjct: 365 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 412



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 180/398 (45%), Gaps = 18/398 (4%)

Query: 149 ILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAH--R 206
           +LT   K K   ++L      DSF +P  ++                  +L  ++ H  R
Sbjct: 67  LLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY---------------TLHILINSFCHLNR 111

Query: 207 KKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTL 266
            K   A   F +M   GF P + +    ++ L        A+     M +    PNV+  
Sbjct: 112 GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAY 171

Query: 267 NMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
           N ++ + CK   +  A  +F  M + G  P + TYN+LI   CN           N M  
Sbjct: 172 NTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVD 231

Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-KATNVSPNVVTYNTLINGYGQVGNSE 385
           + I P+V++FNT++   CK+GK+ EA+ +  +M +     PNV++YNTLINGY ++   +
Sbjct: 232 SKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRID 291

Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
               L+ EM R  +  D +TY+ LI GLC   + + A  L  ++   S +PN  TY  L+
Sbjct: 292 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILL 351

Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
              C  +    A  L K++  S   P+  +  + +   C+  + + A ++   +  K + 
Sbjct: 352 DYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 411

Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           PD    S + +GL   G  + A KLFR+M+  G    G
Sbjct: 412 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNG 449



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 154/313 (49%), Gaps = 3/313 (0%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N+F S  L    +D A+  +  M R +  P+    N ++ +  K+      + +   M+S
Sbjct: 30  NRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89

Query: 292 MGFIPSVTTYNTLISGHC--NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
            G  P++ T + LI+  C  N+G +  A+   + M   G +P+V+T+ TLI G CK G  
Sbjct: 90  FGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 149

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
             A R+   M   N  PNV  YNT+I+   +        +L+ EM+  GI  DI TYN+L
Sbjct: 150 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 209

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI-RSG 468
           I  LC   + K  A L+ ++  + ++P+  +++ ++   C       A  +   MI R G
Sbjct: 210 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGG 269

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN   +  L++ +C+ +  D+A  +  EM  + + PD++  S L  GL H  + + A+
Sbjct: 270 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 329

Query: 529 KLFRKMEIRGLLP 541
            LF +M     +P
Sbjct: 330 ALFHEMVACSQIP 342



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 167/345 (48%), Gaps = 1/345 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   ++ +  +    ++   A + F +M   G  P I + N  + +L +        
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
               EM  ++I P+V + N V+ A CK G +  A +V   M +  G +P+V +YNTLI+G
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           +C    +  AM     M +  + P+ +T++TLI G C   +L +A  +F EM A +  PN
Sbjct: 284 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 343

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +VTY  L++   +        +L + +  + +  DI   N  I G+C+ G+ + A  L  
Sbjct: 344 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 403

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           +L    L P+  TYS +I G C R   + A +L++ M  +GC  N  I+  +   F +N 
Sbjct: 404 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
           +  RA ++L EM+ +  + D+  ++     L   G D+   ++ R
Sbjct: 464 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 137/287 (47%), Gaps = 7/287 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           F+ +        K   A D   +M +  G +P + S N  ++     +R+D A+  + EM
Sbjct: 241 FNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 300

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
            R  + P+  T + ++H  C +  ++ A+ +F  M +   IP++ TY  L+   C    L
Sbjct: 301 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 360

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           + AM     +E + + P++   N  I G C+ G+L  A  +FS + +  + P+V TY+ +
Sbjct: 361 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 420

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           ING  + G  +  + L+ EM  NG  ++   YN +  G  +  +T +A  L++++     
Sbjct: 421 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 480

Query: 435 VPNASTYSALITGQCVRKNSERAF-QLYKSMIRSGCRPNKHIFEMLM 480
             +AST +       V+  S+    Q  K ++R  C+    I+E +M
Sbjct: 481 SADASTMTLF-----VKMLSDDGLDQSLKQILRDFCKQKSWIYENVM 522


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/439 (25%), Positives = 194/439 (44%), Gaps = 10/439 (2%)

Query: 136 SSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV 195
           S  T+ +  +  H+L        ++ ++  ++          L + +   + + +S   V
Sbjct: 139 SESTIRSCCVAAHLLAAEELRHVAQDVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFSV 198

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
            D L + + + +    A +   +MR+ G  P           LL           +K++ 
Sbjct: 199 LDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVI 258

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           R    P  YT + ++  FC+ G I     +   M      P+   YN +I+  C +G  S
Sbjct: 259 RRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTS 318

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+ + NLM + G  P V+TFNT+I  FCK+G + EA ++F  +K    SPN + YNTL+
Sbjct: 319 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLM 378

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           NGY ++   +    LYEEM + GI  D +T+N L+ G  K G+ +    L+KD+    L+
Sbjct: 379 NGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLL 438

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           P+ S +   ++G C     + A +    M+  G  P+   F  +++ + Q    D+A E 
Sbjct: 439 PDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEA 498

Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG----------LLPKGFD 545
              M+   + P     S L  GL   G+ + A +L  +M  +G          LL K F 
Sbjct: 499 YKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFK 558

Query: 546 KLRTINCAPENGEKESGGL 564
           +   +      GE E  G+
Sbjct: 559 RGDVVGAQSLWGEMERRGI 577



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 144/280 (51%), Gaps = 9/280 (3%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS--ERVDI--ALGFYKEMRRNRISPNV 263
           + + AT+   QM + G    +   N   + LLD   +R D+  A   + EM R  I P+V
Sbjct: 526 RLQEATELIGQMIEKG----LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDV 581

Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
              +  +    K G++E A  VF  M   G IP+   YN+LI G C  G L+ A+K + +
Sbjct: 582 VAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKV 641

Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
           M   G+ P++ T N +I G CK+G++  A  +F +M  T +SP+++TYNTLINGY +  +
Sbjct: 642 MRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFD 701

Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
                +L   M  +G   D+ TYN  I G C   +  +A  ++ +L    +VPN  TY++
Sbjct: 702 MVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNS 761

Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
           ++ G C     +RA  L   +++    PN     +L+S F
Sbjct: 762 MLNGVC-SDILDRAMILTARLLKMAFVPNVVTANLLLSQF 800



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 142/302 (47%)

Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
           R   AL ++  M     +P V T N V++AFCK G +  A ++F  ++ MGF P+   YN
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
           TL++G+     +  A      M K GI P+ ITFN L+ G  K G+  + +R+  ++   
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
            + P+   ++  ++G    G  +       +ML  G+   I+ +N++I    + G   KA
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
               K +    L P+ ST S+L+ G  +    + A +L   MI  G   N   F +L+  
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDK 555

Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
           F +  D   A  +  EM  + + PD +  S    GL   G  E A  +F +M  +GL+P 
Sbjct: 556 FFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615

Query: 543 GF 544
            F
Sbjct: 616 NF 617



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 164/355 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C+ + + F+ +   +        A   F  +++ GF P     N  ++  +    +D 
Sbjct: 330 RGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQ 389

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   Y+EMR+  I+P+  T N+++    K G  E    + K++  +G +P  + ++  +S
Sbjct: 390 ANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVS 449

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  AM+F   M + G+ P++I FN++I  + + G   +A   +  M    ++P
Sbjct: 450 GLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTP 509

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           +  T ++L+ G    G  +    L  +M+  G+ V+ + +  L+    K G    A  L 
Sbjct: 510 SPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLW 569

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
            ++++  + P+   +SA I G   +   E A+ ++  M+R G  PN   +  L+  FC+ 
Sbjct: 570 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKC 629

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + A ++   M  + + PD    + +  GL   G+   A+ +F  M   GL P
Sbjct: 630 GKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSP 684



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 153/331 (46%), Gaps = 35/331 (10%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           G LP     +  +S L  + R+D A+ F  +M    +SP++   N V+ A+ + G+ ++A
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA----------------MKFKNL--- 323
            E +K M   G  PS +T ++L+ G    G L  A                M F  L   
Sbjct: 496 FEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDK 555

Query: 324 ----------------MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
                           ME+ GI P+V+ F+  I G  K+G + EA  +F EM    + PN
Sbjct: 556 FFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPN 615

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
              YN+LI G+ + G       L + M   G+  DI T N +I GLCK+G+ + A  +  
Sbjct: 616 NFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFM 675

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           D+ +  L P+  TY+ LI G C   +   A  L   M  SG  P+   + + +  FC + 
Sbjct: 676 DMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSR 735

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
             +RA  +L E++   + P+++  + + +G+
Sbjct: 736 RMNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 146/281 (51%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           PN +  N+V++A C  G    A+  F  M   G  P+V T+NT+I+  C +G +  A K 
Sbjct: 299 PNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKL 358

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            + +++ G  PN I +NTL+ G+ K  ++ +AN ++ EM+   ++P+ +T+N L++G+ +
Sbjct: 359 FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYK 418

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            G  E G  L +++   G+  D   ++  + GLC  G+  +A   + D+ +  L P+   
Sbjct: 419 YGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIA 478

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           ++++I         ++AF+ YK M+  G  P+      L+     N     A E++ +M+
Sbjct: 479 FNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI 538

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           EK ++ +++  + L       G    A  L+ +ME RG+ P
Sbjct: 539 EKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFP 579



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 163/356 (45%), Gaps = 4/356 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           S + F+ +   Y+       A + +  M  +G  P   +C+  L  L  + R+  A    
Sbjct: 475 SIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELI 534

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
            +M    +S N     +++  F K G +  A  ++  ME  G  P V  ++  I G   +
Sbjct: 535 GQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQ 594

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           GL+  A      M + G+ PN   +N+LI GFCK GKL+EA ++   M+   + P++ T 
Sbjct: 595 GLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTT 654

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N +I G  + G      +++ +M + G+  DI+TYN LI G CK      A  LV  +  
Sbjct: 655 NMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYA 714

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +   P+ +TY+  I G C  +   RA  +   ++ +G  PN   +  +++  C ++  DR
Sbjct: 715 SGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDR 773

Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKL 547
           A  +   +L+    P+ +  + L S  +  G  E  +    K+     +P  FD++
Sbjct: 774 AMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLS---EIPYAFDEI 826


>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 204/454 (44%), Gaps = 67/454 (14%)

Query: 97  LTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF 156
           L AL   ++P  V  VL  +    +L+L FF W +  +    T ++   ++  L K ++F
Sbjct: 136 LDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQF 195

Query: 157 KSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
           +   S++     RG+L  D+F L                        + + YA  +K + 
Sbjct: 196 RLVWSLVEAMRCRGLLSKDTFRL------------------------IVRRYARARKVKE 231

Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
           A +TF +M  +G    +   N  +  L  S++V                           
Sbjct: 232 AVETFEKMAGFGLKADLSDYNWLIDVLSKSKQV--------------------------- 264

Query: 272 AFCKLGIIERAVEVFKNMESMG-FIPSVTTYNTLISGHCN-KGLLSLAMKFKNLMEKNGI 329
                   ++A  +FK M+  G F+P + TY  L+ G  + K LL L   ++ +++  G+
Sbjct: 265 --------KKAHAIFKEMKRNGRFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDA-GL 315

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           QP+V+ +  LI  FCK GK  EA ++F EM+     P+   Y  LING G     +    
Sbjct: 316 QPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGLGSEERLDEALK 375

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
            +E    +G  +++ T NA++   C+  K + A  +V ++ K+ + PN+ TY  ++    
Sbjct: 376 YFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLI 435

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
             +  E A+ +++ M + GC P  + + M++  FC NE  D A +V  +M EK + P   
Sbjct: 436 KSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMH 495

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           + S L +GL    + E A   F++M  RG+ P G
Sbjct: 496 MFSALINGLCFENRLEEACAYFQEMLDRGIRPPG 529


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 193/421 (45%), Gaps = 27/421 (6%)

Query: 143 HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY---------------- 186
           +S ++H   ++     +E ++R  ++ D  D P  ++ S+++ Y                
Sbjct: 359 YSNIIHAHCQSGNMDRAEELVRE-MEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERL 417

Query: 187 RMCDSSPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS--E 242
           + C   P +  +  L   Y    K   A     +M  +G    I+  NK  S L++    
Sbjct: 418 KECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHG----IKHNNKTYSMLINGFIH 473

Query: 243 RVDIALGF--YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
             D A  F  +++M ++ + P+    N+++ AFCK+G ++RA+ +F+ M+     PS  T
Sbjct: 474 LHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRT 533

Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           +  +I G    G +  A    +LM ++G  P V+T+N LI G  +K ++ +A  +  +M 
Sbjct: 534 FRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVEKAVSVLDKMS 593

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
              ++PN  TY  ++ GY   G+       + ++  +G+K+D+  Y  L+   CK G+ +
Sbjct: 594 IAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQ 653

Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
            A  + +++    +  N   Y+ LI G   R +   A  L K M   G  PN H F   +
Sbjct: 654 SALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYI 713

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           +  C+  D  RA  V+ EM +  + P+    + L  G       + A+K F +M+  GL 
Sbjct: 714 NACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLK 773

Query: 541 P 541
           P
Sbjct: 774 P 774



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 141/312 (45%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + +L   + H   F NA   F  M   G  P     N  + +      +D A+  ++ M+
Sbjct: 464 YSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQ 523

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           + R+ P+  T   ++  F   G ++RA +    M   G  P+V TYN LI G   K  + 
Sbjct: 524 KERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRKHQVE 583

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+   + M   GI PN  T+  ++ G+   G + +A   F+++K + +  +V  Y TL+
Sbjct: 584 KAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLL 643

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
               + G  +   ++  EM    I  +   YN LI G  + G   +AA L+K + ++ + 
Sbjct: 644 RACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIP 703

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
           PN  T+++ I   C   + +RA  + + M   G +PN   F  L+  + +    DRA + 
Sbjct: 704 PNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKC 763

Query: 496 LLEMLEKCMAPD 507
             EM    + PD
Sbjct: 764 FEEMKSAGLKPD 775



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 163/353 (46%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  + +  VF  L   YA     R A     +M+  G    + + +  +S    +     
Sbjct: 280 RGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILISGYGKTNDAQS 339

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   +KE +    + N    + ++HA C+ G ++RA E+ + ME  G    +  Y++++ 
Sbjct: 340 ADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMH 399

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G+         +     +++ G +P +I++  LI  + K GK+ +A  I  EM++  +  
Sbjct: 400 GYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKEMESHGIKH 459

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           N  TY+ LING+  + +     S++E+M+++G++ D   YN L+   CK G   +A  + 
Sbjct: 460 NNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIF 519

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
           + + K  + P+  T+  +I G  V  + +RAF     M RSGC P    +  L+    + 
Sbjct: 520 ERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYNALIHGLVRK 579

Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
              ++A  VL +M    +AP+    + +  G    G    A + F K++  GL
Sbjct: 580 HQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 632



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 158/334 (47%), Gaps = 16/334 (4%)

Query: 157 KSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTF 216
           K+   ++ G +    F     +F+ ++ S    D +  +++LL + +        A   F
Sbjct: 462 KTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRA--IYNLLVEAFCKMGNMDRAIRIF 519

Query: 217 CQMR-------DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
            +M+       +  F PIIE      +   D +R    L     MRR+  +P V T N +
Sbjct: 520 ERMQKERMQPSNRTFRPIIEG----FAVAGDMKRAFDTLDL---MRRSGCAPTVMTYNAL 572

Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
           +H   +   +E+AV V   M   G  P+  TY  ++ G+   G +  A ++   ++++G+
Sbjct: 573 IHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGL 632

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           + +V  + TL+   CK G++  A  +  EM    +  N   YN LI+G+ + G+    A 
Sbjct: 633 KLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAAD 692

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
           L ++M  +GI  +I T+ + I   CK G  ++A  +++++    L PN  T++ LI G  
Sbjct: 693 LLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWA 752

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
                +RA + ++ M  +G +P++  +  L+++ 
Sbjct: 753 RVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSL 786



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 6/298 (2%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A   ++ MR   I PN +    ++HA+   G +  A+   + M+S G   +V TY+ LIS
Sbjct: 270 ARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILIS 329

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQP---NVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
           G+   G  + A    NL ++   +    N I ++ +I   C+ G +  A  +  EM+   
Sbjct: 330 GY---GKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDG 386

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
           +   +  Y+++++GY  V + +    ++E +   G K  I++Y  LI    K GK  KA 
Sbjct: 387 IDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAI 446

Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
            + K+++ + +  N  TYS LI G     +   AF +++ MI+SG +P++ I+ +L+  F
Sbjct: 447 AISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAF 506

Query: 484 CQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           C+  + DRA  +   M ++ M P +     +  G    G  + A      M   G  P
Sbjct: 507 CKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAP 564



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 8/214 (3%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   F  ++  + K+G  H A   F  M+A  + PN   + +L++ Y   G+     S
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
             EEM   GI++ ++TY+ LI G  K    + A  L K+        N   YS +I   C
Sbjct: 308 CVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHC 367

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
              N +RA +L + M   G      ++  +M  +   +D ++   ++ E L++C    +I
Sbjct: 368 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQD-EKKCLIVFERLKECGFKPTI 426

Query: 510 I----LSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           I    L  LY  +   GK   A+ + ++ME  G+
Sbjct: 427 ISYGCLINLYVKV---GKVPKAIAISKEMESHGI 457


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 192/401 (47%), Gaps = 19/401 (4%)

Query: 159 SESILRGILDSDSFDLPSKLFDSILYSYRM----------------CDSSP--LVFDLLF 200
           +E+++R  ++ +  D P  ++ +++  Y M                C  +P  + +  L 
Sbjct: 418 AEALVRE-MEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLI 476

Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
             Y    K   A +    M+  G    +++ +  ++  L  +    A   ++++ ++ + 
Sbjct: 477 NMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLK 536

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+V   N ++ AFC +G ++RA+ + K M+     P+  T+  +I G    G +  A++ 
Sbjct: 537 PDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEI 596

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
            ++M ++G  P V TFN L+ G  +K K+ +A  I  EM    VSP+  TY T+++GY  
Sbjct: 597 FDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAA 656

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
           +G++      + +M   G+++D+ TY AL+   CK G+ + A  + ++++   +  N   
Sbjct: 657 LGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRNTFV 716

Query: 441 YSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML 500
           Y+ LI G   R +   A  L + M + G +P+ H +   ++  C+  D  RA + + EM 
Sbjct: 717 YNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTMEEME 776

Query: 501 EKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
              + P+    + L  G  +    E A+  F ++++ GL P
Sbjct: 777 AAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKP 817



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 168/354 (47%), Gaps = 2/354 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R  D S  V+  L   YA  +    A     +M + G    + + +  +         + 
Sbjct: 323 RGIDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEA 382

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A  ++K+ +    + N Y    +++A+C+   ++RA  + + ME  G    +  Y+T++ 
Sbjct: 383 ADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMD 442

Query: 307 GHCN-KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           G+   +      + FK L E  G  P+VIT+  LI  + K GK+ +A  +   MK+  + 
Sbjct: 443 GYTMIRNEEKCLIVFKRLKE-CGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIK 501

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            N+ TY+ LING+ ++ +     +++E+++++G+K D++ YN +I   C  G   +A ++
Sbjct: 502 HNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHM 561

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           VK++ K    P + T+  +I G        RA +++  M RSGC P  H F  L+    +
Sbjct: 562 VKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVE 621

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               ++A E+L EM    ++PD    + +  G    G    A + F KM   GL
Sbjct: 622 KRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGL 675



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 145/324 (44%), Gaps = 35/324 (10%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
            + +L   +   K + NA   F  +   G  P +   N  + +      +D A+   KEM
Sbjct: 506 TYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEM 565

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           ++ R  P   T   ++H F + G + RA+E+F  M   G IP+V T+N L+ G   K  +
Sbjct: 566 QKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKM 625

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGF------------------------------- 343
             A++  + M   G+ P+  T+ T++ G+                               
Sbjct: 626 EKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEAL 685

Query: 344 ----CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
               CK G++  A  +  EM A  +  N   YN LI+G+ + G+    A L ++M + G+
Sbjct: 686 LKACCKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGV 745

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           + DI TY + I   CK G   +A   +++++   + PN  TY+ LI G       E+A  
Sbjct: 746 QPDIHTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALS 805

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTF 483
            ++ +  +G +P+K ++  LM++ 
Sbjct: 806 CFEELKLAGLKPDKAVYHCLMTSL 829



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 2/282 (0%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   F  +   +A   + R A + F  MR  G +P + + N  +  L++  +++ A+
Sbjct: 570 CRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAV 629

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM    +SP+ +T   +MH +  LG   +A E F  M + G    V TY  L+   
Sbjct: 630 EILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKAC 689

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C  G +  A+     M    I  N   +N LI G+ ++G + EA  +  +M    V P++
Sbjct: 690 CKSGRMQSALAVTREMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDI 749

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
            TY + IN   + G+        EEM   G+K ++ TY  LI G       +KA    ++
Sbjct: 750 HTYTSFINACCKAGDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEE 809

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
           L    L P+ + Y  L+T    R     A+ +Y S I S CR
Sbjct: 810 LKLAGLKPDKAVYHCLMTSLLSRATVAEAY-IY-SGILSICR 849



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 153/330 (46%), Gaps = 15/330 (4%)

Query: 209 FRNATDTFCQMRDYGFLPII----ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
           F+ A +    +  Y +  II    ++CN           +D A    +EM    I   + 
Sbjct: 387 FKKAKERHTNLNAYIYGNIIYAYCQACN-----------MDRAEALVREMEEEGIDAPLD 435

Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
             + +M  +  +   E+ + VFK ++  GF PSV TY  LI+ +   G +S A++   +M
Sbjct: 436 IYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMM 495

Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
           +  GI+ N+ T++ LI GF K      A  +F ++    + P+VV YN +I  +  +GN 
Sbjct: 496 KSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNM 555

Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
           +    + +EM +   +    T+  +I G  + G+ ++A  +   + ++  +P   T++AL
Sbjct: 556 DRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNAL 615

Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
           + G   ++  E+A ++   M  +G  P++H +  +M  +    D  +A E   +M  + +
Sbjct: 616 VLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGL 675

Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKM 534
             D      L       G+ + A+ + R+M
Sbjct: 676 QLDVFTYEALLKACCKSGRMQSALAVTREM 705



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 133/316 (42%), Gaps = 35/316 (11%)

Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
           P+     +++  + + G + RA + F++M + G  PS   Y +LI  +     +  A+  
Sbjct: 292 PSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALSC 351

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
              M + GI+ +++T++ ++ GF K G    A+  F + K  + + N   Y  +I  Y Q
Sbjct: 352 VRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYCQ 411

Query: 381 VGNSEMGASLYEEMLRNGIKV-----------------------------------DILT 405
             N +   +L  EM   GI                                      ++T
Sbjct: 412 ACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVIT 471

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           Y  LI    K GK  KA  + K +    +  N  TYS LI G    K+   AF +++ +I
Sbjct: 472 YGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVI 531

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
           + G +P+  ++  ++  FC   + DRA  ++ EM ++   P S     +  G    G+  
Sbjct: 532 KDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMR 591

Query: 526 LAMKLFRKMEIRGLLP 541
            A+++F  M   G +P
Sbjct: 592 RALEIFDMMRRSGCIP 607



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 91/210 (43%)

Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
           +P+   F  ++  + ++G +H A + F  M+A  + P+   Y +LI+ Y    + E   S
Sbjct: 291 KPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSSHVYTSLIHAYAVGRDMEEALS 350

Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
              +M   GI++ ++TY+ ++ G  K G  + A    K   +     NA  Y  +I   C
Sbjct: 351 CVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYGNIIYAYC 410

Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
              N +RA  L + M   G      I+  +M  +    + ++   V   + E   AP  I
Sbjct: 411 QACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKECGFAPSVI 470

Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
               L +     GK   A+++ + M+  G+
Sbjct: 471 TYGCLINMYTKIGKVSKALEVSKMMKSVGI 500


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 4/350 (1%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L+F+L+   +   K   +A      M + G +P + +    ++ L  + RV  A    ++
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 292

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M     SPNV T + V++  CK G ++ A E+F+ ME     P+V T+N LI G C    
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP-NVVTYN 372
           +  A +  + M + G  P++IT+N+LI G CK  ++ EA ++F  +  + VS  N VTY+
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412

Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
           TL +GY  +G       ++  ++  G   D+ TY +LIL  CK  +  +   LV+++   
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASK 472

Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
              P  +T SA++ G     ++ERA QL+ SM   GC  +  I+ +++    +    D+A
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKA 532

Query: 493 AEVLLEMLEK---CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
             VL ++++K      P S  +  L   L   GK + A +L  KM  RG 
Sbjct: 533 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGF 582



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 157/313 (50%), Gaps = 2/313 (0%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           SCN  L  L    R   AL  ++        PN +T  +++  F   G ++ A+++ + M
Sbjct: 24  SCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM 83

Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
           +S GF  +   + TL+ G C+ G +  A++    M K+   P+V+T+  L+   CK GK 
Sbjct: 84  KSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKF 142

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            EA  +  EM A   +P+ VT++TLI+G  + G+ E    + E++++ G+      +  +
Sbjct: 143 DEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETI 202

Query: 410 ILGLC-KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           I  LC K    + A+ ++  +      P    ++ +I G C  K+ + A++L + MI  G
Sbjct: 203 IQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKG 262

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
           C PN   F +L++  C+      A ++L +M+    +P+ +  S + +GL   G+ + A 
Sbjct: 263 CVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAY 322

Query: 529 KLFRKMEIRGLLP 541
           +LF+ ME R   P
Sbjct: 323 ELFQLMERRNCPP 335



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 158/301 (52%), Gaps = 3/301 (0%)

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ++ ++ L F+ +  R+R+  NV++ N  +   C+L   + A+ +F+N  +   +P+  TY
Sbjct: 2   DKPELVLLFF-DWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTY 60

Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
             LI G  + G L +A++    M+ +G + N +   TL+ G C  G++ EA   F  M A
Sbjct: 61  GILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-A 119

Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
            + +P+V+TY  L++   + G  +    +  EM+  G   D +T++ LI GLCK G  ++
Sbjct: 120 KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQ 179

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLM 480
           A  +++D+ +  +  + + +  +I   C + NS E A ++   +I  G  P   +F +++
Sbjct: 180 AFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVI 239

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + FC+ +D D A ++L  M+EK   P+    + L +GL    +   A +L  KM + G  
Sbjct: 240 NGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCS 299

Query: 541 P 541
           P
Sbjct: 300 P 300



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 187/450 (41%), Gaps = 77/450 (17%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-R 220
           ++RG   +   D+  +L + +  S    + + +V   L K      +   A + F  M +
Sbjct: 63  LIRGFSSAGDLDIAIQLLEEMKSSGF--EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK 120

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG--- 277
           D    P + +    + +L  + + D A G  +EM     +P+  T + ++   CK G   
Sbjct: 121 DCA--PDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178

Query: 278 -----------------------IIERAVEVFKNME----------SMGFIPSVTTYNTL 304
                                  II+R    + ++E          + GF P+V  +N +
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238

Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
           I+G C    L  A K   +M + G  PNV TF  LI G CK  ++ EA ++  +M     
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
           SPNVVTY+T+ING  + G  +    L++ M R     +++T+N LI GLCK  + ++A  
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQ 358

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG---------------- 468
           L   + +    P+  TY++LI G C     + AFQL++++  SG                
Sbjct: 359 LYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGY 418

Query: 469 ---------CR-----------PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                    CR           P+   +  L+  +C+        E++ EM  K   P  
Sbjct: 419 AALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRV 478

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             LS +  GL      E A++LF  M  RG
Sbjct: 479 NTLSAVLGGLFEGNHTERAIQLFDSMAARG 508



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/454 (22%), Positives = 179/454 (39%), Gaps = 76/454 (16%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           ++ G   +   D   KL + ++   + C  +   F +L        +   A     +M  
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIE--KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVM 295

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
            G  P + + +  ++ L    +VD A   ++ M R    PNV T N+++   CK   IE 
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP-NVITFNTLI 340
           A +++  M   G  P + TYN+LI G C    +  A +    + ++G+   N +T++TL 
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLF 415

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV------------------- 381
            G+   G++ +A RIFS +     SP++ TY +LI  Y +                    
Sbjct: 416 HGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFP 475

Query: 382 ---------------GN-SEMGASLYEEMLRNGIKVDILTYN------------------ 407
                          GN +E    L++ M   G   D L YN                  
Sbjct: 476 PRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV 535

Query: 408 --------------------ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
                               AL+  LC+ GKT  A  L+  + +       S+Y+ L++G
Sbjct: 536 LEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSG 595

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
               +  + A Q++++M+ +G  P      +++S  C     D A E++  M +    PD
Sbjct: 596 LSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655

Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
               + L  G    G+ +LA KL  +M   GL P
Sbjct: 656 IETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 689



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/386 (21%), Positives = 154/386 (39%), Gaps = 41/386 (10%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           +++ G+      D   +LF   L   R C  + +  ++L       K+   A   + +MR
Sbjct: 307 TVINGLCKQGQVDDAYELFQ--LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMR 364

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP-NVYTLNMVMHAFCKLGII 279
           + G  P I + N  +  L  S +VD A   ++ +  + +S  N  T + + H +  LG +
Sbjct: 365 ETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
             A  +F  +   GF P + TY +LI  +C        ++    M   G  P V T + +
Sbjct: 425 ADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAV 484

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG-------------------- 379
           + G  +      A ++F  M A   + + + YN ++ G                      
Sbjct: 485 LGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRD 544

Query: 380 ------------------QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
                             QVG ++    L  +M   G    + +YN L+ GL +  +  +
Sbjct: 545 RKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDE 604

Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
           A  + + +      P  ST + +I+  C     + A++L + M + GC P+      L+ 
Sbjct: 605 ATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIG 664

Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPD 507
            +C++   D A ++L EM E  + P+
Sbjct: 665 GYCKSGRADLARKLLEEMTEAGLEPN 690



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 145/323 (44%), Gaps = 6/323 (1%)

Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
           S++ G+  S   D   +LF +I  S  +  ++ + +  LF  YA   +  +A   F  + 
Sbjct: 377 SLIDGLCKSFQVDEAFQLFQTIPES-GVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D GF P + +    +     + R    +   +EM      P V TL+ V+    +    E
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISG--HCNKGLLSLAMKFKNLMEKNG--IQPNVITF 336
           RA+++F +M + G       YN ++ G    +K   +LA+  + +++K      P+    
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAV-LEQVIDKRDRKFNPSSSAV 554

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           + L+   C+ GK  +A ++  +M     +  V +YN L++G  ++   +    ++E M+ 
Sbjct: 555 DALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVS 614

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            G   +I T N +I  LC   K   A  LV+ + K    P+  T + LI G C    ++ 
Sbjct: 615 AGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADL 674

Query: 457 AFQLYKSMIRSGCRPNKHIFEML 479
           A +L + M  +G  PN    ++L
Sbjct: 675 ARKLLEEMTEAGLEPNDTTHDLL 697


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 143/262 (54%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
               ++EMRR  + PN+YT N ++  +C+ G  ERA  +F  M   G + +V +YNTLI+
Sbjct: 92  GFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIA 151

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
           G C  G L  A K  ++M   G +P++ITFN L+ G+ K GK+  A   F++MKA    P
Sbjct: 152 GLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQP 211

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
           + VTYN LI G+ +  +         +M   G++   +TY  LI    +E    KA  ++
Sbjct: 212 SAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEIL 271

Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
             ++K  L  +A TY  L+   C+  N + A +L++SM   G  P+  I++M++  + + 
Sbjct: 272 AGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGRE 331

Query: 487 EDFDRAAEVLLEMLEKCMAPDS 508
               +A ++++EM +K + P+S
Sbjct: 332 GSSYKALKLIMEMRQKGLIPNS 353



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 148/314 (47%)

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +C   ++       V  A   + EM    ++PN  T   +MH +   G  E+   +F+
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M   G  P++ TYN LI   C  G    A    + M   GI  NV+++NTLI G C+ G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
           KL +A ++   M+     P+++T+N L++GYG+ G        + +M   G +   +TYN
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
            LI G C+     +A   + D+ +  L P   TY+ LI       +  +AF++   M ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKA 277

Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
           G   + H + +L+   C   +   A ++   M EK + P ++I   +  G    G    A
Sbjct: 278 GLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKA 337

Query: 528 MKLFRKMEIRGLLP 541
           +KL  +M  +GL+P
Sbjct: 338 LKLIMEMRQKGLIP 351



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 129/280 (46%)

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
           +V     +++  CK G +  A  VF  M  +G  P+  TY  L+ G+   G         
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALF 96

Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
             M + G++PN+ T+N LI  +C+ G+   A  +F EM    +  NVV+YNTLI G  + 
Sbjct: 97  EEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRH 156

Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
           G     A L + M   G +  I+T+N L+ G  K GK   A      +      P+A TY
Sbjct: 157 GKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
           + LI G C  ++  RA +    M   G  P K  + +L+ +F +     +A E+L  M +
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
             +  D+     L   L   G  + A KLF+ M  +G+ P
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEP 316



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 138/287 (48%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           ++ L   +    +F  A   F +M   G +  + S N  ++ L    ++  A      MR
Sbjct: 111 YNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMR 170

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
                P++ T N+++  + K G +  A+  F  M++ GF PS  TYN LI+G C    ++
Sbjct: 171 TEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMT 230

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A +  + M++ G++P  +T+  LI  F ++  + +A  I + M+   +  +  TY  L+
Sbjct: 231 RANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLV 290

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
                 GN +    L++ M   G++   + Y+ +I G  +EG + KA  L+ ++ +  L+
Sbjct: 291 RALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLI 350

Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
           PN+++Y   I   C     + A  L   M+R+G + ++ I + L+  
Sbjct: 351 PNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDA 397



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 129/286 (45%), Gaps = 2/286 (0%)

Query: 169 SDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPII 228
           +  F+    LFD +    R    + + ++ L        K  +A      MR  G  P I
Sbjct: 121 TGEFERARSLFDEM--PVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI 178

Query: 229 ESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKN 288
            + N  +     + ++  AL F+ +M+     P+  T NM++  FC+   + RA     +
Sbjct: 179 ITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSD 238

Query: 289 MESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           M+  G  P+  TY  LI     +  +  A +    MEK G++ +  T+  L+   C +G 
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           + +A ++F  M    V P+ V Y+ +I GYG+ G+S     L  EM + G+  +  +Y  
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            I  LCK+ K ++A  L+ D+ +  L  + S   AL+  +   + S
Sbjct: 359 TIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKARLRGS 404



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 5/153 (3%)

Query: 394 MLRNGIK-----VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
           ML  G K     +D+    AL+ G CK G   +A  +  ++    L PN  TY+AL+ G 
Sbjct: 24  MLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGY 83

Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
                 E+ F L++ M R G  PN + +  L+  +C+  +F+RA  +  EM  + +  + 
Sbjct: 84  FTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNV 143

Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  + L +GL   GK   A KL   M   G  P
Sbjct: 144 VSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRP 176



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 1/200 (0%)

Query: 343 FCKKGKLHEANRIFSE-MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
            C  G +  A  + +   K+ + + +V     L+NG  + G+      +++EM   G+  
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           + +TY AL+ G    G+ +K   L +++ +  + PN  TY+ LI   C     ERA  L+
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G   N   +  L++  C++     AA++L  M  +   P  I  + L  G    
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK   A+  F +M+  G  P
Sbjct: 192 GKMSNALPFFNQMKAAGFQP 211


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 210/445 (47%), Gaps = 28/445 (6%)

Query: 104 LTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLE--THSIVLHILTKNRKFKSSES 161
           ++PF    V  ++Q D  + ++ F W+ + K           S  L +L + R F   E 
Sbjct: 66  ISPF----VFDRIQ-DVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIED 120

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L G L +++  L  +    +L++Y                 A       A + +  + +
Sbjct: 121 VL-GNLRNENVKLTHEALSHVLHAY-----------------AESGSLSKAVEIYDYVVE 162

Query: 222 -YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
            Y  +P + +CN  LS L+ S R+  A   Y EM     S + Y+  +++   C  G +E
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVE 222

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA-MKFKNLMEKNGIQPNVITFNTL 339
              ++ +     G IP++  YNT+I G+C  G +  A + FK L  K G  P + TF T+
Sbjct: 223 VGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLK-GFMPTLETFGTM 281

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I GFCK+G    ++R+ SE+K   +  +V   N +I+   + G     A     ++ N  
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
           K D+ TYN LI  LCKEGK + A   + +  K  L+PN  +Y+ LI   C  K  + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
           L   M   GC+P+   + +L+     +   D A  + ++++++ ++PD+ I + L SGL 
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 520 HCGKDELAMKLFRKMEIRGLLPKGF 544
             G+   A  LF +M  R +LP  +
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAY 486



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 149/293 (50%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P + + N  ++ L    + ++A+GF  E  +  + PN  +   ++ A+CK    + A ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M   G  P + TY  LI G    G +  A+  K  +   G+ P+   +N L+ G CK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
            G+   A  +FSEM   N+ P+   Y TLI+G+ + G+ +    ++   +  G+KVD++ 
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           +NA+I G C+ G   +A   +  +++  LVP+  TYS +I G   +++   A ++++ M 
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
           ++ C+PN   +  L++ FC   DF  A E   EM  + + P+ +  + L   L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 1/293 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  L + Y   K++  A+    QM + G  P I +    +  L+ S  +D A+    +
Sbjct: 381 LSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVK 440

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +    +SP+    NM+M   CK G    A  +F  M     +P    Y TLI G    G 
Sbjct: 441 LIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGD 500

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
              A K  +L  + G++ +V+  N +I GFC+ G L EA    + M   ++ P+  TY+T
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           +I+GY +  +      ++  M +N  K +++TY +LI G C +G  K A    K++    
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620

Query: 434 LVPNASTYSALITGQCVRKNS-ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
           LVPN  TY+ LI       ++ E+A   ++ M+ + C PN+  F  L+  F +
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVK 673



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/404 (24%), Positives = 172/404 (42%), Gaps = 23/404 (5%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S   +++    S  +D+ SKL   +  + R C    + + +L           +A +   
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLL--LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           ++ D G  P     N  +S L  + R   A   + EM    I P+ Y    ++  F + G
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
             + A +VF      G    V  +N +I G C  G+L  A+   N M +  + P+  T++
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559

Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
           T+I G+ K+  +  A +IF  M+     PNVVTY +LING+   G+ +M    ++EM   
Sbjct: 560 TIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619

Query: 398 GIKVDILTYNALILGLCKEGKT-KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
            +  +++TY  LI  L KE  T +KA Y  + +  N  VPN  T++ L+ G  V+K S +
Sbjct: 620 DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG-FVKKTSGK 678

Query: 457 AF---------------QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
                            + +  M   G   +   +   +   C +     A     +M++
Sbjct: 679 VLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVK 738

Query: 502 KCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
           K  +PD +  + +  G    G      K +R M+   L  KG +
Sbjct: 739 KGFSPDPVSFAAILHGFCVVGNS----KQWRNMDFCNLGEKGLE 778


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 158/327 (48%), Gaps = 12/327 (3%)

Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
           C+  +Y +  +I+        L ++  V  AL     M ++  SPN++T  +++   CK 
Sbjct: 249 CRRNEYSYTILIQG-------LCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKE 301

Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
           G I  A  +   M   G +PSV TYN +I G+C  G L  A+  K LME NG  P+  T+
Sbjct: 302 GRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTY 361

Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           N+LI G C  GK  EA  + +   A   SP V+T+  +INGY +    +    +   M+ 
Sbjct: 362 NSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMIS 420

Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
           +  K+D+  Y  LI  L K+ + K+A   + ++  N L PN   Y+++I   C       
Sbjct: 421 SKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGA 480

Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
           A +++K     GCRPN   +  L+    Q++   +A  ++ +M E  + P  I  + L  
Sbjct: 481 ALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 540

Query: 517 GLHHCGKDEL--AMKLFRKMEIRGLLP 541
           G   C K E   A +LF  ME  GL P
Sbjct: 541 G--QCKKHEFDNAFRLFEMMEQNGLTP 565



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 196/431 (45%), Gaps = 6/431 (1%)

Query: 119 DYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-SDSFDLPSK 177
           D   +L FF WV        T  +H+ +L +L + R   + + ++  ++  S + +   +
Sbjct: 69  DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMRE 128

Query: 178 LFDSILYSYRMCDS----SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
             D+I    R        SP  ++L  ++        +    + Q+   G LP   + N 
Sbjct: 129 AVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            + +      + IA  +++ +R + +  + YT N ++  +C+ G + +A  +   M  MG
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
              +  +Y  LI G C    +  A+    +M ++G  PN+ T+  LI G CK+G++H+A 
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
            +  EM    V P+V TYN +I+GY + G  +    +   M  NG   D  TYN+LI GL
Sbjct: 309 VLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL 368

Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
           C  GK  +A  L+         P   T++ +I G C  +  + A ++   MI S C+ + 
Sbjct: 369 CG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDL 427

Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
             + +L+S   +      A + L E+    ++P+ +I + +       GK   A+++F+ 
Sbjct: 428 QAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKL 487

Query: 534 MEIRGLLPKGF 544
            E  G  P  +
Sbjct: 488 TEHEGCRPNAW 498



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 169/350 (48%), Gaps = 4/350 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  +   + LL +      +  +A     +M   G +P + + N  +     S R+  AL
Sbjct: 284 CSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDAL 343

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
           G    M  N  +P+ +T N ++H  C  G  + A E+     + GF P+V T+  +I+G+
Sbjct: 344 GIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGY 402

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C    +  A++ K++M  +  + ++  +  LI    KK +L EA    +E+ A  +SPNV
Sbjct: 403 CKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNV 462

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           V Y ++I+ Y +VG       +++     G + +  TY++LI GL ++ K  KA  L+  
Sbjct: 463 VIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITK 522

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + ++ + P   TY+ LI GQC +   + AF+L++ M ++G  P++  + +L    C++  
Sbjct: 523 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS-- 580

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
             RA E    +++K +    +  + L  G    G  E A  L  KM   G
Sbjct: 581 -GRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEG 629



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 166/342 (48%), Gaps = 5/342 (1%)

Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
           GF P + +    ++    +E++D AL     M  ++   ++    +++    K   ++ A
Sbjct: 387 GFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEA 446

Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
            +    + + G  P+V  Y ++I  +C  G +  A++   L E  G +PN  T+++LI+G
Sbjct: 447 KDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYG 506

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
             +  KLH+A  + ++M+   ++P V+TY TLI G  +    +    L+E M +NG+  D
Sbjct: 507 LIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPD 566

Query: 403 ILTYNALILGLCKEGKTKKA-AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
              YN L   LCK G+ ++A ++LVK      +V    TY++L+ G     N+E A  L 
Sbjct: 567 EQAYNVLTDALCKSGRAEEAYSFLVK----KGVVLTKVTYTSLVDGFSKAGNTEFAAALI 622

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M+  GC+ + H + +L+   C+ +  + A  +L +M  + +  + +  + + S +   
Sbjct: 623 EKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKE 682

Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
           GK + A  +F +M   G  P        I+   + G  E  G
Sbjct: 683 GKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAG 724



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/438 (21%), Positives = 181/438 (41%), Gaps = 38/438 (8%)

Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----------- 186
           L L+ + +++ +L K  + K ++  L  I  ++       ++ SI+ +Y           
Sbjct: 425 LDLQAYGVLISVLIKKHRLKEAKDTLNEIF-ANGLSPNVVIYTSIIDAYCKVGKVGAALE 483

Query: 187 -------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
                    C  +   +  L       +K   A     +M++ G  P + +    +    
Sbjct: 484 VFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQC 543

Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
                D A   ++ M +N ++P+    N++  A CK G   RA E +  +   G + +  
Sbjct: 544 KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVKKGVVLTKV 600

Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
           TY +L+ G    G    A      M   G + +  T++ L+   CK+ KL+EA  I  +M
Sbjct: 601 TYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660

Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
               V  N+V Y  +I+   + G  +   S++ EM+ +G K   +TY   I   CK G+ 
Sbjct: 661 TLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRI 720

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
           ++A +L+ ++++N + P+  TY+  I G       + AF   K MI + C PN   + +L
Sbjct: 721 EEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLL 780

Query: 480 MSTFCQNE----------------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
           +  F +                    D   ++L  M++  + P ++  S + +G     +
Sbjct: 781 LKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATR 840

Query: 524 DELAMKLFRKMEIRGLLP 541
            E A  L   M  + + P
Sbjct: 841 LEEACVLLDHMLGKDISP 858



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 140/320 (43%), Gaps = 16/320 (5%)

Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
            L +L   ++++ AL    +M    +  N+    +++    K G  + A  +F  M S G
Sbjct: 640 LLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSG 699

Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
             PS  TY   IS +C  G +  A      ME+NG+ P+V+T+N  I G    G +  A 
Sbjct: 700 HKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAF 759

Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQ--------VGNSEMG--------ASLYEEMLRN 397
                M   +  PN  TY  L+  + +        V  S M           L E M+++
Sbjct: 760 STLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKH 819

Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
           G+    +TY+++I G CK  + ++A  L+  +    + PN   Y+ LI   C  K  E+A
Sbjct: 820 GLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKA 879

Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
                +MI  G +P+   +  L++  C   D+D+A  +  ++LE     + +    L  G
Sbjct: 880 ASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDG 939

Query: 518 LHHCGKDELAMKLFRKMEIR 537
           L   G  ++  +L   ME R
Sbjct: 940 LLKAGHVDICSQLLSAMENR 959



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 143/354 (40%), Gaps = 34/354 (9%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           T+S++L  L K +K   + SIL      D   L            R    + + + ++  
Sbjct: 636 TYSVLLQALCKQKKLNEALSIL------DQMTL------------RGVKGNIVAYTIIIS 677

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
                 K  +A   F +M   G  P   +   F+SS     R++ A     EM RN ++P
Sbjct: 678 EMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAP 737

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI---------------- 305
           +V T N+ ++    +G ++ A    K M      P+  TY  L+                
Sbjct: 738 DVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDT 797

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           SG  N   L    +    M K+G+ P  +T++++I GFCK  +L EA  +   M   ++S
Sbjct: 798 SGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDIS 857

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           PN   Y  LI     +   E  AS    M+  G +  + +Y+ LI GLC EG   KA  L
Sbjct: 858 PNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKAL 917

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             DL +     N   +  L  G     + +   QL  +M    CR +   + M+
Sbjct: 918 FCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMV 971


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 180/360 (50%), Gaps = 8/360 (2%)

Query: 186 YRMCDSSP----LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
           Y+M +  P    + F +L + ++   +   A + + +M   G  P +   +  +   L  
Sbjct: 362 YKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKG 421

Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
           ++ + AL  + E     ++ NV+  N ++   CK G I++A E+ + MES G  P+V +Y
Sbjct: 422 QKHEEALKLFDESFETGLA-NVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSY 480

Query: 302 NTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
           N ++  HC K  + LA   F N++EK G++PN  T++ LI G  K         + ++M 
Sbjct: 481 NNVMLAHCRKKNMDLARTVFSNMLEK-GLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMT 539

Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG-IKVDILTYNALILGLCKEGKT 419
           ++N+  N V Y T+ING  +VG +     L   M+      V  ++YN++I G  KEG+ 
Sbjct: 540 SSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEM 599

Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
             A    +++  N + PN  TY++L+ G C     ++A ++   M   G + +   +  L
Sbjct: 600 DYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGAL 659

Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
           +  FC+  + + A+ +  E+LE+ + P   + + L SG  + G    A+ L++KM   GL
Sbjct: 660 IHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGL 719



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/264 (28%), Positives = 141/264 (53%)

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +   R   +  + N ++  F K G ++ AV  ++ M + G  P+V TY +L+ G C    
Sbjct: 574 IEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A++ ++ M+  G++ ++  +  LI GFCKK  +  A+ +FSE+    ++P+   YN+
Sbjct: 634 MDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNS 693

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+G+  +GN      LY++ML++G++ D+ TY  LI GL KEG    A+ L  ++    
Sbjct: 694 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVG 753

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVP+   Y+ ++ G   +    +  ++++ M ++   PN  I+  +++   +  + D A 
Sbjct: 754 LVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 813

Query: 494 EVLLEMLEKCMAPDSIILSELYSG 517
            +  EML+K + PD      L SG
Sbjct: 814 RLHDEMLDKGILPDGATFDILVSG 837



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 118/482 (24%), Positives = 211/482 (43%), Gaps = 61/482 (12%)

Query: 123 SLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK-------FKSSES------------IL 163
           +L+ F  ++   PS  ++ T S+++   +KN +       +K  ES            I+
Sbjct: 357 ALDLFYKMENEGPSPNSV-TFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTII 415

Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
           +G L     +   KLFD    S+    ++  + + +      + K   AT+   +M   G
Sbjct: 416 QGWLKGQKHEEALKLFDE---SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRG 472

Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM--------------- 268
             P + S N  + +    + +D+A   +  M    + PN YT ++               
Sbjct: 473 IGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVL 532

Query: 269 --------------------VMHAFCKLGIIERAVEVFKNM-ESMGFIPSVTTYNTLISG 307
                               +++  CK+G   +A E+  NM E   F  S  +YN++I G
Sbjct: 533 EVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDG 592

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
              +G +  A+     M  NGI PNVIT+ +L+ G CK  ++ +A  +  EMK   V  +
Sbjct: 593 FIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLD 652

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           +  Y  LI+G+ +  N E  ++L+ E+L  G+      YN+LI G    G    A  L K
Sbjct: 653 IPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYK 712

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            + K+ L  +  TY+ LI G     N   A  LY  M   G  P++ ++ ++++   +  
Sbjct: 713 KMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKG 772

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG--FD 545
            F +  ++  EM +  + P+ +I + + +G +  G  + A +L  +M  +G+LP G  FD
Sbjct: 773 QFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFD 832

Query: 546 KL 547
            L
Sbjct: 833 IL 834



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 213/500 (42%), Gaps = 74/500 (14%)

Query: 109 VKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKF--KSSESILRGI 166
           V  VLL  + +   +L F+ W +  + S    +   +++HIL  + +   ++S+ ++R +
Sbjct: 74  VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLIRYV 133

Query: 167 LDSDSFDLPSKLFDSILYSYRM--CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGF 224
             S+   + S L  +++ S ++   + +   F+ L   Y+  ++   A D   QM + G 
Sbjct: 134 STSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGV 193

Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK-------LG 277
           +P +   N+ LS+L+    +  A   Y  M    +  +  T  ++M A  +       L 
Sbjct: 194 IPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALE 253

Query: 278 IIERAVEVFKNMESMGF-----------------------------IPSVTTYNTLISGH 308
           +  RA+E     +S+ +                             +PS  TY ++I   
Sbjct: 254 VFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILAS 313

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
             +G +  A+++K+ M  +GI  NV+   +LI G CK   L  A  +F +M+    SPN 
Sbjct: 314 VKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNS 373

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG---------------- 412
           VT++ LI  + + G  E     Y++M   G+   +   + +I G                
Sbjct: 374 VTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 433

Query: 413 ------------------LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
                             LCK+GK  KA  L++ ++   + PN  +Y+ ++   C +KN 
Sbjct: 434 SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNM 493

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           + A  ++ +M+  G +PN + + +L+    +N D     EV+ +M    +  + ++   +
Sbjct: 494 DLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTI 553

Query: 515 YSGLHHCGKDELAMKLFRKM 534
            +GL   G+   A +L   M
Sbjct: 554 INGLCKVGQTSKARELLANM 573



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 134/253 (52%), Gaps = 2/253 (0%)

Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
           S N  +   +    +D A+  Y+EM  N ISPNV T   +M   CK   +++A+E+   M
Sbjct: 585 SYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEM 644

Query: 290 ESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGK 348
           ++ G    +  Y  LI G C K  + S +  F  L+E+ G+ P+   +N+LI GF   G 
Sbjct: 645 KNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE-GLNPSQPVYNSLISGFRNLGN 703

Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
           +  A  ++ +M    +  ++ TY TLI+G  + GN  + + LY EM   G+  D + Y  
Sbjct: 704 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTV 763

Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
           ++ GL K+G+  K   + +++ KN++ PN   Y+A+I G     N + AF+L+  M+  G
Sbjct: 764 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 823

Query: 469 CRPNKHIFEMLMS 481
             P+   F++L+S
Sbjct: 824 ILPDGATFDILVS 836



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 148/301 (49%), Gaps = 1/301 (0%)

Query: 160 ESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
           ++I+ G+          +L  +++   R C S  + ++ +   +    +   A   + +M
Sbjct: 551 QTIINGLCKVGQTSKARELLANMIEEKRFCVSC-MSYNSIIDGFIKEGEMDYAVAAYEEM 609

Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
              G  P + +    +  L  + R+D AL    EM+   +  ++     ++H FCK   +
Sbjct: 610 CANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNM 669

Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
           E A  +F  +   G  PS   YN+LISG  N G +  A+     M K+G++ ++ T+ TL
Sbjct: 670 ESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 729

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           I G  K+G L  A+ +++EM+A  + P+ + Y  ++NG  + G       ++EEM +N +
Sbjct: 730 IDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 789

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             ++L YNA+I G  +EG   +A  L  ++    ++P+ +T+  L++G+  +    RA  
Sbjct: 790 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAAS 849

Query: 460 L 460
           L
Sbjct: 850 L 850



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 1/253 (0%)

Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
           GF  +   +N L++ +        A+   N M + G+ P V   N  +    ++  + EA
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
             ++S M A  V  +  T   L+    +         ++   +  G + D L Y+  +  
Sbjct: 217 KELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQA 276

Query: 413 LCKEGKTKKAAYLVKDLDKNSL-VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
            CK      A  L++++ +  L VP+  TY+++I     + N E A +    M+  G   
Sbjct: 277 CCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISM 336

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           N      L++  C+N D   A ++  +M  +  +P+S+  S L       G+ E A++ +
Sbjct: 337 NVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFY 396

Query: 532 RKMEIRGLLPKGF 544
           +KME  GL P  F
Sbjct: 397 KKMESLGLTPSVF 409


>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 482

 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 180/356 (50%), Gaps = 4/356 (1%)

Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
           SP  F ++ + YA   K   A   F  M +YG    + S N  L  L  S+RV++A   +
Sbjct: 126 SPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLF 185

Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
           K ++  +   +  + N++++ +C +    +A+E+ K M   G  P++TTYN +++G+   
Sbjct: 186 KALK-GKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRA 244

Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
           G  + A  F   M+K     +V+T+ ++I G    G++  A  +F++M    V P+V T+
Sbjct: 245 GQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATF 304

Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
           N LI    +  + E    ++EEM++ G   + +TYN +I GLC  G+ ++A  L++ ++ 
Sbjct: 305 NALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMED 364

Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
           +   PN  TY+ LI   C     E+   L++ M    C PN   + +L+++    ++ D 
Sbjct: 365 DDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDN 424

Query: 492 ---AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
              A ++L+EM+++   P  +  + +  GL   G  + A ++       G LP+ F
Sbjct: 425 LLVAGKLLVEMVDRGFLPRKLTFNRVLDGLLLTGNQDFAKEILSLQGGCGRLPRKF 480



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 197/437 (45%), Gaps = 45/437 (10%)

Query: 113 LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSF 172
           LLK +  ++L +   +   T  P + TL   +++L+         ++   L   L S S 
Sbjct: 5   LLKTRHSHLLRIRHHSTTTTSPPEATTLA--ALILN--------STNSQTLAESLHSPSI 54

Query: 173 DLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHR-------KKFRNATDTFCQMRDYGFL 225
               +L ++IL   R+ +  P      FK  +H          F +A D   ++RD+  L
Sbjct: 55  QWTPQLVNTILK--RLWNHGPKALHF-FKILSHHPSYCHQASSFDHAIDICARLRDFRTL 111

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
             + S                       MR  R+ P+  T  ++   +  +G   RAV V
Sbjct: 112 WFLVS----------------------RMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTV 149

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFC 344
           F +M   G    ++++NT++   C    + +A   FK L  K   + + +++N ++ G+C
Sbjct: 150 FMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKAL--KGKFKADCVSYNIIVNGWC 207

Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
              +  +A  +  EM    ++PN+ TYN ++NGY + G +      + EM +    +D++
Sbjct: 208 LIKRTPKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVV 267

Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
           TY ++I GL   G+ K+A  +   + K+ ++P+ +T++ALI   C + + E A  +++ M
Sbjct: 268 TYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEM 327

Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
           ++ G  PN   + +++   C   +  RA E++  M +    P+    + L       G+ 
Sbjct: 328 VKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEI 387

Query: 525 ELAMKLFRKMEIRGLLP 541
           E  + LF+KM     LP
Sbjct: 388 EKGLDLFQKMGNGDCLP 404



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 95/207 (45%), Gaps = 3/207 (1%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R CD   + +  +        + + A + F QM   G LP + + N  +  L   + V+ 
Sbjct: 260 RKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKKDSVEN 319

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  ++EM +    PN  T N+V+   C +G ++RA+E+ + ME     P+V TYN LI 
Sbjct: 320 AILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIR 379

Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG-FCKKGK--LHEANRIFSEMKATN 363
             C+ G +   +     M      PN+ T+N LI   F +K    L  A ++  EM    
Sbjct: 380 YFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRG 439

Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASL 390
             P  +T+N +++G    GN +    +
Sbjct: 440 FLPRKLTFNRVLDGLLLTGNQDFAKEI 466


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 163/322 (50%), Gaps = 13/322 (4%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP-------IIESCNKFLSSLLDSERVDIA 247
            F  L   Y        A   F  M++YG  P       +I++C K     ++ ++V   
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK---GGMEFKQV--- 323

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
             F+ EM+RN + P+  T N ++    + G+ E A  +F  M +      V +YNTL+  
Sbjct: 324 AKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDA 383

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G + LA +    M    I PNV++++T+I GF K G+  EA  +F EM+   ++ +
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALD 443

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
            V+YNTL++ Y +VG SE    +  EM   GIK D++TYNAL+ G  K+GK  +   +  
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
           ++ +  ++PN  TYS LI G       + A ++++    +G R +  ++  L+   C+N 
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563

Query: 488 DFDRAAEVLLEMLEKCMAPDSI 509
               A  ++ EM ++ ++P+ +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVV 585



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 141/274 (51%), Gaps = 2/274 (0%)

Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
           F   +K FD +  +    D   + F+ L    +    +  A + F +M +      + S 
Sbjct: 320 FKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSY 377

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  L ++    ++D+A     +M   RI PNV + + V+  F K G  + A+ +F  M  
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
           +G      +YNTL+S +   G    A+     M   GI+ +V+T+N L+ G+ K+GK  E
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
             ++F+EMK  +V PN++TY+TLI+GY + G  +    ++ E    G++ D++ Y+ALI 
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
            LCK G    A  L+ ++ K  + PN  TY+++I
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 136/287 (47%)

Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
           +F+     F +M+  G  P   + N  L+        + A   + EM   RI  +V++ N
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378

Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
            ++ A CK G ++ A E+   M     +P+V +Y+T+I G    G    A+     M   
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438

Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
           GI  + +++NTL+  + K G+  EA  I  EM +  +  +VVTYN L+ GYG+ G  +  
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498

Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
             ++ EM R  +  ++LTY+ LI G  K G  K+A  + ++     L  +   YSALI  
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558

Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
            C       A  L   M + G  PN   +  ++  F ++   DR+A+
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 154/320 (48%), Gaps = 11/320 (3%)

Query: 229 ESCNKFLSSLLDSERVDIALGFY-----KEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
           + C   +  L +    D A+GFY     +E R+N        +   +  + K+ I +R  
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKR-- 254

Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
            +F+   + G+  +V  ++ LIS +   GL   A+   N M++ G++PN++T+N +I   
Sbjct: 255 -IFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA- 312

Query: 344 CKKGKLH--EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           C KG +   +  + F EM+   V P+ +T+N+L+    + G  E   +L++EM    I+ 
Sbjct: 313 CGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQ 372

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
           D+ +YN L+  +CK G+   A  ++  +    ++PN  +YS +I G       + A  L+
Sbjct: 373 DVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLF 432

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
             M   G   ++  +  L+S + +    + A ++L EM    +  D +  + L  G    
Sbjct: 433 GEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQ 492

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           GK +   K+F +M+   +LP
Sbjct: 493 GKYDEVKKVFTEMKREHVLP 512



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/185 (30%), Positives = 92/185 (49%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           +  +   +A   +F  A + F +MR  G      S N  LS      R + AL   +EM 
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              I  +V T N ++  + K G  +   +VF  M+    +P++ TY+TLI G+   GL  
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYK 531

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            AM+     +  G++ +V+ ++ LI   CK G +  A  +  EM    +SPNVVTYN++I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591

Query: 376 NGYGQ 380
           + +G+
Sbjct: 592 DAFGR 596



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 86/192 (44%), Gaps = 2/192 (1%)

Query: 158 SSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
           S  +++ G   +  FD    LF  + Y     D   + ++ L   Y    +   A D   
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR--VSYNTLLSIYTKVGRSEEALDILR 468

Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
           +M   G    + + N  L       + D     + EM+R  + PN+ T + ++  + K G
Sbjct: 469 EMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGG 528

Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
           + + A+E+F+  +S G    V  Y+ LI   C  GL+  A+   + M K GI PNV+T+N
Sbjct: 529 LYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYN 588

Query: 338 TLIFGFCKKGKL 349
           ++I  F +   +
Sbjct: 589 SIIDAFGRSATM 600



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 28/256 (10%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           L +  L   Y+    ++ A + F + +  G    +   +  + +L  +  V  A+    E
Sbjct: 515 LTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE 574

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV--------------- 298
           M +  ISPNV T N ++ AF +   ++R+ + + N  S+ F  S                
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSSSALSALTETEGNRVIQL 633

Query: 299 -----TTYNTLISGHCNKGL--LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
                T  N   +  C +G+  LS  ++    M +  I+PNV+TF+ ++    +     +
Sbjct: 634 FGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA-SLYEEMLRNGIKVDILTYNALI 410
           A+ +  E++  +     V +  L+   GQ  N  + A SL++++           YNAL 
Sbjct: 694 ASMLLEELRLFDNKVYGVVHGLLM---GQRENVWLQAQSLFDKVNEMDGSTASAFYNALT 750

Query: 411 LGLCKEGKTKKAAYLV 426
             L   G+ K+ A LV
Sbjct: 751 DMLWHFGQ-KRGAELV 765


>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
 gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
          Length = 715

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 1/347 (0%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           + L+   Y    +  +       M   GF+    +C   +S+  +         ++ +  
Sbjct: 234 YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWV 293

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
              + PN+     +++  CK G I++A E+ + M   G+ P+V T+  LI G C KG   
Sbjct: 294 ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTE 353

Query: 316 LAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
            A + F  L+  +  +PNV T+ ++I G+CK+ KL+ A  + S MK   + PN  TY  L
Sbjct: 354 KAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCL 413

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+G+ + GN E    L + M + G   +I TYNA I  LCK+G+  +A  L+K   +  L
Sbjct: 414 IDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGL 473

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
             +  TY+ LI+  C R ++  A   +  M ++G +P+ H +  L++ F +    + + +
Sbjct: 474 QADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEK 533

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           +  E +   + P     + +  G        LA+K F +M   G  P
Sbjct: 534 LFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTP 580



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 1/348 (0%)

Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
           V D + + +A   KF+ A +   +M ++G +  + + N       +   V  A   + EM
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEM 222

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R   + P+  +  ++  A+C++G I       K+M   GF+    T   +IS  C KG  
Sbjct: 223 RVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFA 282

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
           S    + +   + G++PN+I F +LI G CK+G + +A  +  EM      PNV T+  L
Sbjct: 283 SRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTAL 342

Query: 375 INGYGQVGNSEMGASLYEEMLR-NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           I+G  + G +E    L+ +++R +  K ++ TY ++I G CKE K  +A  L+  + +  
Sbjct: 343 IDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQG 402

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           LVPN  TY+ LI G     N E+A++L   M + G   N   +   + + C+   F  A 
Sbjct: 403 LVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEAC 462

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
           ++L +     +  D++  + L S L        A+  F KM   G+ P
Sbjct: 463 KLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQP 510



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 160/349 (45%), Gaps = 9/349 (2%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG-FYKEM 254
           F  L      R   + A +   +M   G+ P + +    +  L      + A   F K +
Sbjct: 304 FTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLV 363

Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
           R +   PNV+T   ++H +CK   + RA  +   M+  G +P+  TY  LI GH   G  
Sbjct: 364 RSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNF 423

Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
             A +  +LM K G   N+ T+N  I   CKKG+  EA ++  +     +  + VTY  L
Sbjct: 424 EKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTIL 483

Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
           I+   +  ++      + +M + G++ D+ TYN LI    ++ + +++  L  +     L
Sbjct: 484 ISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGL 543

Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
           VP   TY+++I G C  +N   A + +  M   GC P+   +  L+S  C+    D A +
Sbjct: 544 VPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQ 603

Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM------KLFRKMEIR 537
           +   M++K ++P  +  + L     +C +D+ A       +L +K+ IR
Sbjct: 604 LYEAMVDKGLSPCEV--TRLTLAYEYCKQDDSATAMVILERLDKKLWIR 650



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 1/327 (0%)

Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
           F +  + G  P + +    ++ L     +  A    +EM +    PNVYT   ++   CK
Sbjct: 289 FDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCK 348

Query: 276 LGIIERAVEVF-KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
            G  E+A  +F K + S  + P+V TY ++I G+C +  L+ A    + M++ G+ PN  
Sbjct: 349 KGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTK 408

Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
           T+  LI G  K G   +A  +   M     S N+ TYN  I+   + G       L ++ 
Sbjct: 409 TYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKG 468

Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
            R G++ D +TY  LI  LC+   T++A      + K  + P+  TY+ LI     ++  
Sbjct: 469 FRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRM 528

Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
           E + +L+   +  G  P K  +  ++  +C++ +   A +    M +    PDS+    L
Sbjct: 529 EESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGAL 588

Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
            SGL    K + A +L+  M  +GL P
Sbjct: 589 ISGLCKESKLDEACQLYEAMVDKGLSP 615



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 106/273 (38%), Gaps = 35/273 (12%)

Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
           Y    K   A     +M++ G +P  ++    +     +   + A      M +   S N
Sbjct: 382 YCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSAN 441

Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
           ++T N  + + CK G    A ++ K    +G      TY  LIS  C +     A+ F +
Sbjct: 442 IFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFS 501

Query: 323 LMEKNGIQPNVITFNTLI-----------------------------------FGFCKKG 347
            M K G+QP++ T+NTLI                                    G+C+  
Sbjct: 502 KMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDR 561

Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
            +  A + F+ M     +P+ +TY  LI+G  +    +    LYE M+  G+    +T  
Sbjct: 562 NVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRL 621

Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
            L    CK+  +  A  +++ LDK   +   +T
Sbjct: 622 TLAYEYCKQDDSATAMVILERLDKKLWIRTVNT 654



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/220 (22%), Positives = 85/220 (38%), Gaps = 3/220 (1%)

Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
            +  + + +L      R   R A   F +M   G  P + + N  +++     R++ +  
Sbjct: 474 QADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEK 533

Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
            + E     + P   T   ++  +C+   +  A++ F  M   G  P   TY  LISG C
Sbjct: 534 LFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLC 593

Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
            +  L  A +    M   G+ P  +T  TL + +CK+     A  I   +   +    + 
Sbjct: 594 KESKLDEACQLYEAMVDKGLSPCEVTRLTLAYEYCKQDDSATAMVILERL---DKKLWIR 650

Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
           T NTLI          M    + ++L     VD +T  A 
Sbjct: 651 TVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAF 690



 Score = 47.0 bits (110), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 44/220 (20%), Positives = 84/220 (38%), Gaps = 35/220 (15%)

Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
           F + GK  EA  +  EM+   +   V T N +    G++G      ++++EM   G+  D
Sbjct: 171 FAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPD 230

Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
            ++Y  + +  C+ G+       + D D+                              K
Sbjct: 231 SVSYKLMAIAYCRMGR-------ISDTDR----------------------------WLK 255

Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
            M+R G   +     +++STFC+     R      + +E  + P+ I  + L +GL   G
Sbjct: 256 DMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRG 315

Query: 523 KDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
             + A ++  +M  +G  P  +     I+   + G  E  
Sbjct: 316 SIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKA 355


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 172/361 (47%), Gaps = 42/361 (11%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C+ +  +F  + + Y    K  +A   F +M++Y   P  +S     + L+   ++ +AL
Sbjct: 81  CNITEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLAL 140

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCK-LGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
            FY+ MR   I P+V +LN+++ A CK  G ++ A+ +F+ M + G  P   TY TLI G
Sbjct: 141 RFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXG 200

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
            C  G +  A +    ME     P V+T+ +LI G C+   L  A R+  EM +  + PN
Sbjct: 201 LCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPN 260

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           V TY++L++G+ + G S     L + M+      +++TY+ L+ GLCKEGK ++A  ++ 
Sbjct: 261 VFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILD 320

Query: 428 DLDKNSLVPNASTYSALITGQC------------------------------VR------ 451
            +    L P+A  Y  +I+G C                              VR      
Sbjct: 321 RMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVV 380

Query: 452 -----KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
                ++  RAFQLY SM   G   +   F+ L++ FC   D  +AA ++ EM+     P
Sbjct: 381 QGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIP 440

Query: 507 D 507
           D
Sbjct: 441 D 441



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 173/374 (46%), Gaps = 25/374 (6%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK----FLSSLLDSERVDI---AL 248
           F L+         FR A +  C+M++       E CN     FLS      RV     A+
Sbjct: 53  FSLMISRLVSANHFRLAEELLCRMKE-------EKCNITEDIFLSICRAYGRVHKPLDAV 105

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
             +++M+     P+  +   V         ++ A+  ++ M  MG  PSV + N LI   
Sbjct: 106 RVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKAL 165

Query: 309 C-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
           C N G +  A++    M   G  P+  T+ TLI G C+ GK+ EA  +F EM+    SP 
Sbjct: 166 CKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
           VVTY +LI+G  Q  + +    L EEM   GIK ++ TY++L+ G CK G + +A  L+ 
Sbjct: 226 VVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
            +     +PN  TYS L+ G C     + A ++   M   G RP+  ++  ++S FC   
Sbjct: 286 MMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDIC 345

Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-------AMKLFRKMEIRGLL 540
            F  AA  L EM+   ++P+ +  S L+  +H+     L       A +L+  M  RG+ 
Sbjct: 346 KFHEAANFLDEMVLGGISPNRLTWS-LHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGIS 404

Query: 541 --PKGFDKLRTINC 552
              K FD L    C
Sbjct: 405 IDAKTFDSLVNYFC 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 141/302 (46%), Gaps = 10/302 (3%)

Query: 168 DSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPI 227
           +S + D   ++F  +    R C      +  L        K   A + F +M      P 
Sbjct: 168 NSGTMDAALRIFREM--PNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPT 225

Query: 228 IESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFK 287
           + +    +  L  S+ +D A+   +EM    I PNV+T + +M   CK G   RA+E+  
Sbjct: 226 VVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLD 285

Query: 288 NMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKG 347
            M S   +P++ TY+TL+ G C +G L  A++  + M+  G++P+   +  +I GFC   
Sbjct: 286 MMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDIC 345

Query: 348 KLHEANRIFSEMKATNVSPNVVTY-------NTLINGYGQVGNSEMGASLYEEMLRNGIK 400
           K HEA     EM    +SPN +T+       N ++ G     +      LY  M   GI 
Sbjct: 346 KFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHPNRAFQLYLSMRTRGIS 404

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
           +D  T+++L+   C +G   KAA+LV ++  +  +P+  T++A++     R+    + +L
Sbjct: 405 IDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAEL 464

Query: 461 YK 462
            +
Sbjct: 465 VQ 466


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 178/374 (47%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C  + + + +L        +   A     +M + G  P   +    + +  D    D A+
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 254

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
               EM      PNV+T  +++   C+ G IE A  VF+ M   G  P + T+N LI+G+
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGY 314

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
           C +G +  A +  ++MEK   +PN+ T+N L+ G C+  K ++A  +   +    + P+ 
Sbjct: 315 CKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDR 374

Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
           VTYN L++G+ + G   M  +++  M   G++ D  T+ ALI GLCK G+ ++A  ++  
Sbjct: 375 VTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGS 434

Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
           + K  +  +  T++ALI G C    ++    L+++M+ + C    H F   +    ++  
Sbjct: 435 MVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYK 494

Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLR 548
            + A  +L +M++  + P  +  + L  G    G+  L++K+  +M+  G  P  +    
Sbjct: 495 LNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTI 554

Query: 549 TINCAPENGEKESG 562
            IN    NG  E  
Sbjct: 555 IINGLCNNGRVEEA 568



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 176/363 (48%), Gaps = 9/363 (2%)

Query: 179 FDSILYSYRMCDSSPLVFDLLFKTYAH---RKKFRNATDTFC-QMRDYGFLPIIESCNKF 234
           F + L   RM +   ++  + ++T  +   +  F  A + FC ++   GF      C   
Sbjct: 110 FVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSL 169

Query: 235 LSSLLDSERVDIALGF--YKEMRRNR-ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           +  L +  R D+   F  +++M +     PN  T ++++H  C+ G +E A ++ + M  
Sbjct: 170 V--LANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 227

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
            G  PS  TY  LI   C+ G+   AMK  + M      PNV T+  LI   C++GK+ E
Sbjct: 228 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 287

Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALIL 411
           AN +F +M    + P ++T+N LINGY + G       L   M +   K +I TYN L+ 
Sbjct: 288 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 347

Query: 412 GLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP 471
           GLC+  K+ KA  L++ +  N L+P+  TY+ L+ G C       AF ++ SM  +G  P
Sbjct: 348 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 407

Query: 472 NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
           +   F  L+   C+    ++A  +L  M++K ++ D +  + L  G    GK +    LF
Sbjct: 408 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 467

Query: 532 RKM 534
             M
Sbjct: 468 ENM 470



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 2/380 (0%)

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +++   D    D   K+ D +  + + C  +   + +L        K   A   F +M  
Sbjct: 240 LIKAKCDIGMTDKAMKMLDEM--ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
           +G  P I + N  ++       V  A      M +    PN+ T N +M   C++    +
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
           A  + + +   G +P   TYN L+ G C +G L++A    N M   G++P+  TF  LI 
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
           G CK G+L +AN I   M    +S + VT+  LI+G+ ++G ++    L+E M+ N    
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
              T+N  +  L K+ K  +A  ++  + K  LVP+  T++ LI G C    +  + ++ 
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
           + M ++GC PN + + ++++  C N   + A  +L  M    ++P+    + L       
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKA 597

Query: 522 GKDELAMKLFRKMEIRGLLP 541
           G+ + A ++   M   G  P
Sbjct: 598 GRLDRAFQIVSTMVKNGCQP 617



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 131/264 (49%), Gaps = 2/264 (0%)

Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
           D G LP   + N  +       ++++A   +  M    + P+ +T   ++   CKLG +E
Sbjct: 367 DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLE 426

Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL-SLAMKFKNLMEKNGIQPNVITFNTL 339
           +A  +  +M   G      T+  LI GHC  G    +   F+N++E N       TFN  
Sbjct: 427 QANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVE-NRCLTTAHTFNCF 485

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
           +    K  KL+EAN +  +M    + P+VVT+  LI G+ + G + +   + E M + G 
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545

Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
             ++ TY  +I GLC  G+ ++A  ++  +    + PN  TY+ L+         +RAFQ
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQ 605

Query: 460 LYKSMIRSGCRPNKHIFEMLMSTF 483
           +  +M+++GC+PN HI+  L+S F
Sbjct: 606 IVSTMVKNGCQPNSHIYSALLSGF 629



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 139/300 (46%), Gaps = 1/300 (0%)

Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           +A   Y+ M              V++A CK G ++ A      +  +GF        +L+
Sbjct: 111 VAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLV 170

Query: 306 SGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
             +C +  L  A + F+ + ++   +PN +T++ LI G C+ G+L EA ++  EM     
Sbjct: 171 LANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGC 230

Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
            P+  TY  LI     +G ++    + +EM       ++ TY  LI  LC+EGK ++A  
Sbjct: 231 QPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANG 290

Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
           + + + K+ L P   T++ALI G C       AFQL   M +  C+PN   +  LM   C
Sbjct: 291 VFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 350

Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
           +     +A  +L  +++  + PD +  + L  G    G+  +A  +F  M   GL P GF
Sbjct: 351 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 410



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 123/263 (46%), Gaps = 4/263 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
           C ++   F+          K   A     +M  YG +P + +    +     +    ++L
Sbjct: 475 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 534

Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
              + M++   SPNVYT  ++++  C  G +E A  +  +M S G  P+  TY  L+  H
Sbjct: 535 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 594

Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS--EMKATNVSP 366
              G L  A +  + M KNG QPN   ++ L+ GF        A  + S  ++ A ++S 
Sbjct: 595 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 654

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
                N L +   ++ + +    + +E+ + G+  + L YN L++GLCKEG+  +A  L 
Sbjct: 655 EENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQLT 713

Query: 427 KDLDKNSLVPNASTYSALITGQC 449
           +D+ K+ L P+ +  S++I   C
Sbjct: 714 QDMVKHGLFPDKAI-SSIIEHYC 735


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 35/345 (10%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
           N  LSSL++++     +  +K+   N I+P++ TL+++++ FC    I  A  VF N+  
Sbjct: 61  NNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILK 120

Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ--------------------- 330
            GF P+  T NTLI G C +G +  A+ F + +   G Q                     
Sbjct: 121 RGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKA 180

Query: 331 --------------PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
                         P+V+ +NT+I   CK   L +A  ++SEM    +SP+VVTY TLI+
Sbjct: 181 VARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIH 240

Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
           G+  +G+ +   SL  EM    I  ++ T+N LI  L KEGK K+A  L+  + K  + P
Sbjct: 241 GFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKP 300

Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
           +  TY++LI G  +    + A  ++ SM + G  P+   +  +++  C+ +  D A  + 
Sbjct: 301 DVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLF 360

Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
            EM  K M PD +  + L  GL      E A+ L ++M+ +G+ P
Sbjct: 361 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQP 405



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 159/341 (46%)

Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
           +L   + H+     A   F  +   GF P   + N  +  L     +  AL F+ ++   
Sbjct: 97  ILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQ 156

Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
               +  +   +++  CK G  +    + + +E     P V  YNT+I+  C   LL  A
Sbjct: 157 GFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDA 216

Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
               + M   GI P+V+T+ TLI GFC  G L EA  + +EMK  N++PNV T+N LI+ 
Sbjct: 217 CDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDA 276

Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
             + G  +    L   M++  IK D+ TYN+LI G     + K A Y+   + +  + P+
Sbjct: 277 LSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPD 336

Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
              Y+ +I G C  K  + A  L++ M      P+   +  L+   C+N   +RA  +  
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
            M E+ + PD    + L  GL   G+ E A ++F+++  +G
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKG 437



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 162/315 (51%)

Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
           P +   N  ++SL  ++ +  A   Y EM    ISP+V T   ++H FC +G ++ A  +
Sbjct: 195 PDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSL 254

Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
              M+     P+V T+N LI     +G +  A     +M K  I+P+V T+N+LI G+  
Sbjct: 255 LNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFL 314

Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
             ++  A  +F  M    V+P+V  Y  +ING  +    +   SL+EEM    +  DI+T
Sbjct: 315 VDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVT 374

Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
           YN+LI GLCK    ++A  L K + +  + P+  +Y+ L+ G C     E A ++++ ++
Sbjct: 375 YNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLL 434

Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
             G   N H + +L++  C+   FD A ++  +M +K   PD++    +   L    +++
Sbjct: 435 AKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDEND 494

Query: 526 LAMKLFRKMEIRGLL 540
            A K+ R+M  RGLL
Sbjct: 495 KAEKILREMIARGLL 509



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 166/350 (47%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           +  + L K    R + + A     Q+   GF     S    ++ L  +          ++
Sbjct: 128 ITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRK 187

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           +  + + P+V   N ++++ CK  ++  A +V+  M   G  P V TY TLI G C  G 
Sbjct: 188 LEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGH 247

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           L  A    N M+   I PNV TFN LI    K+GK+ EA  + + M    + P+V TYN+
Sbjct: 248 LKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI+GY  V   +    ++  M + G+  D+  Y  +I GLCK     +A  L +++   +
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKN 367

Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
           ++P+  TY++LI G C   + ERA  L K M   G +P+ + + +L+   C++   + A 
Sbjct: 368 MIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAK 427

Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
           E+   +L K    +    + L + L   G  + A+ L  KME +G +P  
Sbjct: 428 EIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDA 477



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 2/296 (0%)

Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
           A+  +  M   R  P  +  N ++ +          + +FK  E  G  P + T + LI+
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 307 GHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
             C++  ++LA   F N++ K G  PN IT NTLI G C +G++ +A     ++ A    
Sbjct: 101 CFCHQAHITLAFSVFANIL-KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQ 159

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
            + V+Y TLING  + G ++  A L  ++  + +K D++ YN +I  LCK      A  +
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             ++    + P+  TY+ LI G C+  + + AF L   M      PN   F +L+    +
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279

Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
                 A  +L  M++ C+ PD    + L  G     + + A  +F  M  RG+ P
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTP 335



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 112/240 (46%)

Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
           F++L    +   K + A      M      P + + N  +      + V  A   +  M 
Sbjct: 270 FNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMA 329

Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
           +  ++P+V     +++  CK  +++ A+ +F+ M+    IP + TYN+LI G C    L 
Sbjct: 330 QRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 389

Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
            A+     M++ GIQP+V ++  L+ G CK G+L +A  IF  + A     NV  Y  LI
Sbjct: 390 RAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLI 449

Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
           N   + G  +    L  +M   G   D +T++ +I  L ++ +  KA  +++++    L+
Sbjct: 450 NRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGLL 509


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 212/453 (46%), Gaps = 61/453 (13%)

Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPS-SLTLETHSIVLHILTKNRKFKSSES 161
            L P R+  ++ + Q++  L+L+ F +   ++P+ S   +T+  ++H L++ R F   E 
Sbjct: 58  RLYPKRLVSMITR-QQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVEL 116

Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
           +L   L          +F +++ +Y +               A +  F  A  TF +++D
Sbjct: 117 LLSD-LHKSQIKCGENIFINVIRNYGL---------------AGKPDF--ALRTFIRIQD 158

Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIE 280
           +     + S N  L++ + ++R D+    +K  R +  + PNV+T N+++ A CK   +E
Sbjct: 159 FNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVE 218

Query: 281 RAVEVFKNMESMGFIPSVTTYNT-----------------------------------LI 305
            AV+V   M +MG IP+V TY T                                   L+
Sbjct: 219 SAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILM 278

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
           +G+C +G L+ A+K  + M +NG++PN +T+  ++  +CK+ K  EA  +  +M      
Sbjct: 279 NGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYV 338

Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
           P+      +I+   + G  E    L++ ML+     D    + LI  LCKEGK  +A  L
Sbjct: 339 PSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKL 398

Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
             + ++ + +P+  TY+ LI G C +     A +L+  M+  G +PN   + ML+  F +
Sbjct: 399 FGEFERGA-IPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSK 457

Query: 486 NEDFDRAAEVLLEMLE-KCMAPDS---IILSEL 514
             +      +L EML+ +CM   S   I++ EL
Sbjct: 458 IGNAKEGIRILEEMLDNRCMPNKSTYAILIEEL 490



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 130/283 (45%), Gaps = 2/283 (0%)

Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHC-NKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
           A+  F  ++      SV + NTL++    NK    +   FKN   K G+ PNV T N LI
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208

Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
              CKK  +  A ++  EM A  + PNVVTY T++ GY   G+      ++ E+   G  
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268

Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
            D  TY  L+ G C++G+   A  L+ D+ +N + PN  TY  ++   C  K +  A  L
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328

Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
              M+     P+  +   ++   C+    + A E+   ML+K   PD+ I+S L   L  
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCK 388

Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
            GK   A KLF + E RG +P        I    E GE    G
Sbjct: 389 EGKVWEARKLFGEFE-RGAIPSLLTYNTLIAGMCEKGELSEAG 430



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + +  +   Y+ R    NA   F ++ D G+LP   +    ++   +  R+  A+    +
Sbjct: 237 VTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDD 296

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
           M  N + PN  T  +++ A+CK      A  +  +M    ++PS      +I   C  G 
Sbjct: 297 MGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGK 356

Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
           +  A +    M K    P+    +TLI   CK+GK+ EA ++F E +   + P+++TYNT
Sbjct: 357 IEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAI-PSLLTYNT 415

Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
           LI G  + G       L+++M+  G K +  TYN LI G  K G  K+   +++++  N 
Sbjct: 416 LIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNR 475

Query: 434 LVPNASTYSALITGQC 449
            +PN STY+ LI   C
Sbjct: 476 CMPNKSTYAILIEELC 491



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 47/237 (19%), Positives = 91/237 (38%), Gaps = 37/237 (15%)

Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
           + + ++ + Y   KK   A +    M +  ++P    C K +  L ++ +++ A   +K 
Sbjct: 307 VTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKR 366

Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF--------------------------- 286
           M +    P+   ++ ++H  CK G +  A ++F                           
Sbjct: 367 MLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGEL 426

Query: 287 -------KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
                   +M   G+ P+  TYN LI G    G     ++    M  N   PN  T+  L
Sbjct: 427 SEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAIL 486

Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
           I   CK G   E +++ S M   +   +  +++  +N    VGN + G+   +   +
Sbjct: 487 IEELCKMGMEGEVDKVVS-MAMASGGVDSDSWDLFLN--KAVGNLDRGSKALDSFFK 540


>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
 gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
          Length = 550

 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 170/331 (51%), Gaps = 7/331 (2%)

Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRI-SPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
           N  L+ L+   R   A+  ++   ++ + SP+ ++ N+V+   C++G  ++A+E+ + M 
Sbjct: 186 NNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMT 245

Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI-QPNVITFNTLIFGFCKKGKL 349
             G  P   T+N L+ G C    ++        ++++G+  PNV+T+ ++I G+CK G++
Sbjct: 246 EFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRM 305

Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
            +A  ++++M  +   PN VTYN LINGYG+  + E    +Y +++      D++T+++L
Sbjct: 306 EDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSL 365

Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM-IRSG 468
           I G C+ G+   A  + K++ ++ + PN  T+S +I   C +  S  A    + + +R+ 
Sbjct: 366 IDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRAD 425

Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL-- 526
             P   I+  ++   C+    + A  ++ +M EK   PD    + L  G  HC K  +  
Sbjct: 426 IAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIG--HCMKGRIPE 483

Query: 527 AMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
           A+ LF KM   G  P        I+C  + G
Sbjct: 484 AITLFHKMVETGCRPDKITVNSFISCVLKAG 514



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 125/266 (46%), Gaps = 4/266 (1%)

Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIA 247
           C    +  ++L       K+     D   ++ RD   +P + +    +S    + R++ A
Sbjct: 249 CSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDA 308

Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
           L  Y +M  +   PN  T N++++ + K   +E AV +++ +      P V T+++LI G
Sbjct: 309 LSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDG 368

Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA-TNVSP 366
           +C  G L  AM+    M ++ IQPNV TF+ +I   CK+ +  EA     E+    +++P
Sbjct: 369 YCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAP 428

Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
               YN +I+   + G  E    +  +M   G   D  TY  LI+G C +G+  +A  L 
Sbjct: 429 QTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLF 488

Query: 427 KDLDKNSLVPNASTYSALITGQCVRK 452
             + +    P+  T ++ I+  CV K
Sbjct: 489 HKMVETGCRPDKITVNSFIS--CVLK 512



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 135/301 (44%), Gaps = 42/301 (13%)

Query: 282 AVEVFKNMES--MGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVITFNT 338
           A+ +F  + S  +   PS  +Y+ +I+  C  G    A+K F  + +++G  P+ + F +
Sbjct: 93  ALRIFSALHSPPLSVPPSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFF-S 151

Query: 339 LIFGFC-KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
            + G C   G L  A  + ++            YN L+N     G ++   +L+E  +++
Sbjct: 152 FVAGSCTNAGLLDAAVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQD 211

Query: 398 GI------------------------------------KVDILTYNALILGLCKEGKTKK 421
           G+                                      D +T+N L+ GLC+  +  +
Sbjct: 212 GLYSPDGWSFNVVIKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNR 271

Query: 422 AAYLVKDLDKNSL-VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
              L++ L ++ + +PN  TY+++I+G C     E A  +Y  M+ SG RPN   + +L+
Sbjct: 272 GHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLI 331

Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
           + + +  D + A  +  +++ +   PD +  S L  G   CG+ + AM+++++M    + 
Sbjct: 332 NGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQ 391

Query: 541 P 541
           P
Sbjct: 392 P 392



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 18/277 (6%)

Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
           TH+I++  L + ++      +LR  L  D   +P+ +                 +  +  
Sbjct: 255 THNILVDGLCRAKQVNRGHDLLRR-LQRDGVCMPNVV----------------TYTSVIS 297

Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
            Y    +  +A   +  M + G  P   + N  ++    +  ++ A+  Y+++   R  P
Sbjct: 298 GYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPP 357

Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF- 320
           +V T + ++  +C+ G ++ A+ ++K M      P+V T++ +I   C +   + A+ F 
Sbjct: 358 DVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFL 417

Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
           + L  +  I P    +N +I   CK G++ EAN I ++M+     P+  TY  LI G+  
Sbjct: 418 RELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCM 477

Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
            G      +L+ +M+  G + D +T N+ I  + K G
Sbjct: 478 KGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAG 514



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
           R C    + F  L   Y    +  +A   + +M  +   P + + +  + SL    R   
Sbjct: 353 RRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAE 412

Query: 247 ALGFYKEMR-RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
           ALGF +E+  R  I+P  +  N V+   CK G +E A  +  +ME  G  P   TY  LI
Sbjct: 413 ALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILI 472

Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
            GHC KG +  A+   + M + G +P+ IT N+ I    K G  +E ++I 
Sbjct: 473 IGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAGMPNEVDQIM 523


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.136    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,458,649,257
Number of Sequences: 23463169
Number of extensions: 344567836
Number of successful extensions: 957762
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8846
Number of HSP's successfully gapped in prelim test: 3963
Number of HSP's that attempted gapping in prelim test: 766151
Number of HSP's gapped (non-prelim): 74738
length of query: 565
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 417
effective length of database: 8,886,646,355
effective search space: 3705731530035
effective search space used: 3705731530035
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)