BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008454
(565 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SZ10|PP338_ARATH Pentatricopeptide repeat-containing protein At4g26680,
mitochondrial OS=Arabidopsis thaliana GN=At4g26680 PE=2
SV=1
Length = 521
Score = 662 bits (1709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/481 (63%), Positives = 384/481 (79%)
Query: 65 PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSL 124
PIPHR PEPKGQDLDFVN+A+SHLI SDW KL LS HL FRVK+VLLK+QKDY+LSL
Sbjct: 40 PIPHRRNPEPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSL 99
Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
EFF W +T P S +LETH+IVLH LTKNRKFKS+ESILR +L + DLP+K+FD++LY
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
SYR CDS+P VFD LFKT+AH KKFRNATDTF QM+DYGFLP +ESCN ++SSLL RV
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
DIAL FY+EMRR +ISPN YTLNMVM +C+ G +++ +E+ ++ME +GF + +YNTL
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
I+GHC KGLLS A+K KN+M K+G+QPNV+TFNTLI GFC+ KL EA+++F EMKA NV
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
+PN VTYNTLINGY Q G+ EM YE+M+ NGI+ DILTYNALI GLCK+ KT+KAA
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
VK+LDK +LVPN+ST+SALI GQCVRKN++R F+LYKSMIRSGC PN+ F ML+S FC
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
+NEDFD A++VL EM+ + + DS + ++ +GL H GKD+L KL ++ME + L + F
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESF 519
Query: 545 D 545
+
Sbjct: 520 N 520
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 260 bits (664), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 255/505 (50%), Gaps = 41/505 (8%)
Query: 96 KLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRK 155
+L LS + TP ++LLK Q D L L+F W H+ TL I LHILTK +
Sbjct: 38 QLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQ--FFTLRCKCITLHILTKFKL 95
Query: 156 FKSSESILRGILDSDSFD--LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
+K+++ IL + + + D S +F S+ +Y +C S+ VFDL+ K+Y+ A
Sbjct: 96 YKTAQ-ILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKAL 154
Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSER-VDIALGFYKEMRRNRISPNVYTLNMVMHA 272
+ +GF+P + S N L + + S+R + A +KEM +++SPNV+T N+++
Sbjct: 155 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214
Query: 273 FCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPN 332
FC G I+ A+ +F ME+ G +P+V TYNTLI G+C + K M G++PN
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPN 274
Query: 333 VITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYE 392
+I++N +I G C++G++ E + + +EM S + VTYNTLI GY + GN ++
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 393 EMLRNGIKVDILTYNALILGLCKEGKTKKA------------------------------ 422
EMLR+G+ ++TY +LI +CK G +A
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 423 ----AYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
AY V ++++ N P+ TY+ALI G CV E A + + M G P+ +
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
++S FC++ D D A V EM+EK + PD+I S L G + + A L+ +M
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Query: 538 GLLPKGFDKLRTINCAPENGEKESG 562
GL P F IN G+ E
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLEKA 539
Score = 189 bits (479), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 192/373 (51%), Gaps = 2/373 (0%)
Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD 221
++RG + + D+ LFD + + C + + ++ L Y +K + M
Sbjct: 211 LIRGFCFAGNIDVALTLFDKM--ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMAL 268
Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
G P + S N ++ L R+ EM R S + T N ++ +CK G +
Sbjct: 269 KGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQ 328
Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
A+ + M G PSV TY +LI C G ++ AM+F + M G+ PN T+ TL+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
GF +KG ++EA R+ EM SP+VVTYN LING+ G E ++ E+M G+
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D+++Y+ ++ G C+ +A + +++ + + P+ TYS+LI G C ++ ++ A LY
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
+ M+R G P++ + L++ +C D ++A ++ EM+EK + PD + S L +GL+
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 522 GKDELAMKLFRKM 534
+ A +L K+
Sbjct: 569 SRTREAKRLLLKL 581
Score = 168 bits (426), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 85/263 (32%), Positives = 149/263 (56%)
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
AL + EM R+ ++P+V T ++H+ CK G + RA+E M G P+ TY TL+
Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVD 388
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G KG ++ A + M NG P+V+T+N LI G C GK+ +A + +MK +SP
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+VV+Y+T+++G+ + + + + EM+ GIK D +TY++LI G C++ +TK+A L
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLY 508
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
+++ + L P+ TY+ALI C+ + E+A QL+ M+ G P+ + +L++ +
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQ 568
Query: 487 EDFDRAAEVLLEMLEKCMAPDSI 509
A +LL++ + P +
Sbjct: 569 SRTREAKRLLLKLFYEESVPSDV 591
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 168/362 (46%), Gaps = 15/362 (4%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ L K Y F A +M +G P + + + S+ + ++ A+ F +
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
MR + PN T ++ F + G + A V + M GF PSV TYN LI+GHC G
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A+ M++ G+ P+V++++T++ GFC+ + EA R+ EM + P+ +TY++
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI G+ + ++ LYEEMLR G+ D TY ALI C EG +KA L ++ +
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST----------- 482
++P+ TYS LI G + + A +L + P+ + L+
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 483 ----FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
FC A +V ML K PD + + G G A L+++M G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 539 LL 540
L
Sbjct: 671 FL 672
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 161/321 (50%), Gaps = 15/321 (4%)
Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
QMR G P + + ++ A +EM N SP+V T N +++ C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
+E A+ V ++M+ G P V +Y+T++SG C + A++ K M + GI+P+ IT++
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
+LI GFC++ + EA ++ EM + P+ TY LIN Y G+ E L+ EM+
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS--------------- 442
G+ D++TY+ LI GL K+ +T++A L+ L VP+ TY
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
+LI G C++ A Q+++SM+ +P+ + +++ C+ D +A + EM++
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
Query: 503 CMAPDSIILSELYSGLHHCGK 523
++ + L LH GK
Sbjct: 670 GFLLHTVTVIALVKALHKEGK 690
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 140/331 (42%), Gaps = 50/331 (15%)
Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
S + ++ L + K +A M++ G P + S + LS S VD AL
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
+EM I P+ T + ++ FC+ + A ++++ M +G P TY LI+ +C +
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFN---------------------------------- 337
G L A++ N M + G+ P+V+T++
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 338 ----------------TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
+LI GFC KG + EA+++F M N P+ YN +I+G+ +
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTY 441
G+ +LY+EM+++G + +T AL+ L KEGK + ++ + ++ + A
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 442 SALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
L+ N + + M + G PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/489 (30%), Positives = 256/489 (52%), Gaps = 22/489 (4%)
Query: 65 PIPHRTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-------HVLLKVQ 117
P P + + +D +FV+ +++I ++ L L P+ K VL+K++
Sbjct: 42 PFPDYSPKKASVRDTEFVH-QITNVIK--LRRAEPLRRSLKPYECKFKTDHLIWVLMKIK 98
Query: 118 KDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD------SDS 171
DY L L+FF W ++ + S+L E+ IV+H+ ++ K ++S++ + +DS
Sbjct: 99 CDYRLVLDFFDWARSRRDSNL--ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDS 156
Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
F + FD ++Y+Y+ S P VFD+ F+ R A F +M +YG + ++SC
Sbjct: 157 F---VQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSC 213
Query: 232 NKFLSSL-LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
N +L+ L D + A+ ++E + NV + N+V+H C+LG I+ A + ME
Sbjct: 214 NVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
G+ P V +Y+T+++G+C G L K +M++ G++PN + ++I C+ KL
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
EA FSEM + P+ V Y TLI+G+ + G+ + + EM I D+LTY A+I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
G C+ G +A L ++ L P++ T++ LI G C + + AF+++ MI++GC
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 471 PNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
PN + L+ C+ D D A E+L EM + + P+ + + +GL G E A+KL
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 531 FRKMEIRGL 539
+ E GL
Sbjct: 514 VGEFEAAGL 522
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 155/337 (45%), Gaps = 5/337 (1%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K A + F +M G LP + + A F+ EM I+P+V T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++ FC++G + A ++F M G P T+ LI+G+C G + A + N M +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G PNV+T+ TLI G CK+G L AN + EM + PN+ TYN+++NG + GN E
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
L E G+ D +TY L+ CK G+ KA ++K++ L P T++ L+ G
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C+ E +L M+ G PN F L+ +C + A + +M + + PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
L G HC + F E++G KGF
Sbjct: 631 GKTYENLVKG--HCKARNMKEAWFLFQEMKG---KGF 662
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 167/346 (48%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+V+ L + R R A+ F +M P + + +S + A + E
Sbjct: 352 VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHE 411
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + P+ T +++ +CK G ++ A V +M G P+V TY TLI G C +G
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A + + M K G+QPN+ T+N+++ G CK G + EA ++ E +A ++ + VTY T
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
L++ Y + G + + +EML G++ I+T+N L+ G C G + L+ +
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ PNA+T+++L+ C+R N + A +YK M G P+ +E L+ C+ + A
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
+ EM K + S L G K A ++F +M GL
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 148/316 (46%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ F L Y ++A M G P + + + L +D A E
Sbjct: 422 VTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + + PN++T N +++ CK G IE AV++ E+ G TY TL+ +C G
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGE 541
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A + M G+QP ++TFN L+ GFC G L + ++ + M A ++PN T+N+
Sbjct: 542 MDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNS 601
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
L+ Y N + ++Y++M G+ D TY L+ G CK K+A +L +++
Sbjct: 602 LVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ STYS LI G RK A +++ M R G +K IF+ T + + D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 494 EVLLEMLEKCMAPDSI 509
+ + E++E + + +
Sbjct: 722 DPIDEIIENYLVDEQL 737
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 138/277 (49%), Gaps = 1/277 (0%)
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A + M + SPNV T ++ CK G ++ A E+ M +G P++ TYN++++
Sbjct: 440 AFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G C G + A+K E G+ + +T+ TL+ +CK G++ +A I EM + P
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQP 559
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+VT+N L+NG+ G E G L ML GI + T+N+L+ C K A +
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
KD+ + P+ TY L+ G C +N + A+ L++ M G + + +L+ F +
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
+ F A EV +M + +A D I + +S + GK
Sbjct: 680 KKFLEAREVFDQMRREGLAADKEIF-DFFSDTKYKGK 715
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 238/467 (50%), Gaps = 19/467 (4%)
Query: 103 HLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKP----SSLTLETHSIVLHILTKNRKFKS 158
L P V VL + + D L F + H P +SL+L S ++HIL ++ +
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSL---SAMIHILVRSGRLSD 131
Query: 159 SES-ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFC 217
++S +LR I S L ++ +S+ ++ C S+ VFDLL +TY +K R A + F
Sbjct: 132 AQSCLLRMIRRSGVSRL--EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFT 189
Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
+R GF I++CN + SL+ V++A G Y+E+ R+ + NVYTLN++++A CK G
Sbjct: 190 LLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDG 249
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
+E+ ++ G P + TYNTLIS + +KGL+ A + N M G P V T+N
Sbjct: 250 KMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYN 309
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
T+I G CK GK A +F+EM + +SP+ TY +L+ + G+ ++ +M
Sbjct: 310 TVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR 369
Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
+ D++ +++++ + G KA + + L+P+ Y+ LI G C + A
Sbjct: 370 DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVA 429
Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
L M++ GC + + ++ C+ + A ++ EM E+ + PDS L+ L G
Sbjct: 430 MNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDG 489
Query: 518 LHHCGKDELAMKLFRKMEIRGL---------LPKGFDKLRTINCAPE 555
G + AM+LF+KM+ + + L GF K+ I+ A E
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 187/381 (49%), Gaps = 28/381 (7%)
Query: 174 LPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLP------- 226
+P K F +Y+Y + + K+ A + F +M G P
Sbjct: 296 MPGKGFSPGVYTY----------NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 345
Query: 227 -IIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
++E+C K ++++E+V + +MR + P++ + +M F + G +++A+
Sbjct: 346 LLMEACKK--GDVVETEKV------FSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMY 397
Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
F +++ G IP Y LI G+C KG++S+AM +N M + G +V+T+NT++ G CK
Sbjct: 398 FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCK 457
Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
+ L EA+++F+EM + P+ T LI+G+ ++GN + L+++M I++D++T
Sbjct: 458 RKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVT 517
Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
YN L+ G K G A + D+ ++P +YS L+ C + + AF+++ MI
Sbjct: 518 YNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMI 577
Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
+P I ++ +C++ + L +M+ + PD I + L G
Sbjct: 578 SKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMS 637
Query: 526 LAMKLFRKMEIR--GLLPKGF 544
A L +KME GL+P F
Sbjct: 638 KAFGLVKKMEEEQGGLVPDVF 658
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 2/316 (0%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+++ +L + Y + A + +M G + + N L L + + A + E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + P+ YTL +++ CKLG ++ A+E+F+ M+ V TYNTL+ G G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A + M I P I+++ L+ C KG L EA R++ EM + N+ P V+ N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD--K 431
+I GY + GN+ G S E+M+ G D ++YN LI G +E KA LVK ++ +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
LVP+ TY++++ G C + + A + + MI G P++ + +++ F ++
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 492 AAEVLLEMLEKCMAPD 507
A + EML++ +PD
Sbjct: 711 AFRIHDEMLQRGFSPD 726
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 145/286 (50%), Gaps = 2/286 (0%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
C + ++ + RK A F +M + P + + + A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
+++M+ RI +V T N ++ F K+G I+ A E++ +M S +P+ +Y+ L++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
C+KG L+ A + + M I+P V+ N++I G+C+ G + +M + P+
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 369 VTYNTLINGYGQVGNSEMGASLYEEML--RNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
++YNTLI G+ + N L ++M + G+ D+ TYN+++ G C++ + K+A ++
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
+ + + + P+ STY+ +I G + N AF+++ M++ G P+
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
E A+ +Y+ + RSG N + ++++ C++ ++ L ++ EK + PD + + L
Sbjct: 217 ELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
S G E A +L M +G P + IN ++G+ E
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 222 bits (565), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 140/455 (30%), Positives = 225/455 (49%), Gaps = 11/455 (2%)
Query: 94 WKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKN 153
W KL T + P + L+ + D L L +++W+ + S++LE +LH L
Sbjct: 55 WSKLGVHVTDINPNELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFKLLHSLANA 114
Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDS---SPLVFDLLFKTYAHRKKFR 210
+++ S L G + + S SI ++ MCD+ + ++ D+L YA+ +F
Sbjct: 115 KRYSKIRSFLDGFVRNGS----DHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFE 170
Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
+ F + YG+ SC + +LL R YKEM R +I PNV+T N+V+
Sbjct: 171 LGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVI 230
Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC---NKGLLSLAMKFKNLMEKN 327
+A CK G + +A +V ++M+ G P+V +YNTLI G+C G + A M +N
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
+ PN+ TFN LI GF K L + ++F EM +V PNV++YN+LING G
Sbjct: 291 DVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEA 350
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
S+ ++M+ G++ +++TYNALI G CK K+A + + VP Y+ LI
Sbjct: 351 ISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + F L + M R G P+ + L++ C+N + + AA+ L + L PD
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE-AAKKLFDQLTSKGLPD 469
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
+ L G G+ A L ++M GL P+
Sbjct: 470 LVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 180 DSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
D++L D SP F++L + + F +M D P + S N ++
Sbjct: 281 DAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING 340
Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
L + ++ A+ +M + PN+ T N +++ FCK +++ A+++F +++ G +P+
Sbjct: 341 LCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPT 400
Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
YN LI +C G + K ME+ GI P+V T+N LI G C+ G + A ++F
Sbjct: 401 TRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
++ + + P++VT++ L+ GY + G S A L +EM + G+K LTYN ++ G CKEG
Sbjct: 461 QLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Query: 418 KTKKAAYLVKDLDKN------------------------------------SLVPNASTY 441
K A + ++K LVPN TY
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
+E IV + T N ++ G+ + + + KLFD L S + D + F +L
Sbjct: 427 MEREGIVPDVGTYN-------CLIAGLCRNGNIEAAKKLFDQ-LTSKGLPD--LVTFHIL 476
Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR- 258
+ Y + + R A +M G P + N + + A +M + R
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
+ NV + N+++ + + G +E A + M G +P+ TY + ++G +
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592
>sp|Q9FKR3|PP404_ARATH Pentatricopeptide repeat-containing protein At5g38730
OS=Arabidopsis thaliana GN=At5g38730 PE=2 SV=1
Length = 596
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 221/418 (52%), Gaps = 1/418 (0%)
Query: 122 LSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDS 181
LS FF W + S +L++ ++ ILTK++ FK++ +L + + P L
Sbjct: 62 LSWSFFIWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSL 121
Query: 182 ILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
+ + VF L YA ++ F Q+R G P +++C L+SL+
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ 181
Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
D +K+M + + N++ N+++HA K G E+A ++ ME G P + TY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
NTLIS +C K + A+ ++ ME++G+ PN++T+N+ I GF ++G++ EA R+F E+K
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIK- 300
Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
+V+ N VTY TLI+GY ++ + + L E M G ++TYN+++ LC++G+ ++
Sbjct: 301 DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIRE 360
Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
A L+ ++ + P+ T + LI C ++ A ++ K MI SG + + + ++ L+
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
FC+ + + A E L M+EK +P S L G ++ K + KL + E RGL
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGL 478
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 166/346 (47%), Gaps = 1/346 (0%)
Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
V+++L + A +M + G P I + N +S AL M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
R+ ++PN+ T N +H F + G + A +F+ ++ + TY TLI G+C +
Sbjct: 265 ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDI 323
Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
A++ + +ME G P V+T+N+++ C+ G++ EANR+ +EM + P+ +T NTL
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
IN Y ++ + + ++M+ +G+K+D+ +Y ALI G CK + + A + + +
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGF 443
Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
P +TYS L+ G + + +L + + G + ++ L+ C+ E D A
Sbjct: 444 SPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKV 503
Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
+ M +K + DS+I + + GK A LF M R L+
Sbjct: 504 LFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLM 549
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 127/293 (43%), Gaps = 9/293 (3%)
Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS----ERVDIALGFYKEMRRNR 258
++ + R AT F +++D + + + ++L+D +D AL + M
Sbjct: 283 FSREGRMREATRLFREIKD-----DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRG 337
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
SP V T N ++ C+ G I A + M P T NTLI+ +C + A+
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV 397
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
K K M ++G++ ++ ++ LI GFCK +L A M SP TY+ L++G+
Sbjct: 398 KVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGF 457
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ L EE + G+ D+ Y LI +CK + A L + ++K LV ++
Sbjct: 458 YNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDS 517
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
++ + A L+ M N +++ + +++ + D R
Sbjct: 518 VIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDVLR 570
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 121/278 (43%), Gaps = 36/278 (12%)
Query: 264 YTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNL 323
+ + +M + K G+I ++ VF+ + S G P + L++ + L K
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 324 MEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGN 383
M K G+ N+ +N L+ K G +A ++ SEM+ V P++ TYNTLI+ Y +
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSM 253
Query: 384 SEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA 443
S+ + M R+G+ +I+TYN+ I G +EG+ ++A L +++ K+ + N TY+
Sbjct: 254 HFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTT 312
Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
LI G +C+ D D A + M +
Sbjct: 313 LIDG-----------------------------------YCRMNDIDEALRLREVMESRG 337
Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+P + + + L G+ A +L +M + + P
Sbjct: 338 FSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Score = 72.4 bits (176), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 106/247 (42%), Gaps = 17/247 (6%)
Query: 163 LRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY 222
LR +++S F ++SIL ++C+ + R A +M
Sbjct: 329 LREVMESRGFSPGVVTYNSILR--KLCEDG---------------RIREANRLLTEMSGK 371
Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
P +CN +++ E + A+ K+M + + ++Y+ ++H FCK+ +E A
Sbjct: 372 KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENA 431
Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
E +M GF P TY+ L+ G N+ K EK G+ +V + LI
Sbjct: 432 KEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRR 491
Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
CK ++ A +F M+ + + V + T+ Y + G ++L++ M + V+
Sbjct: 492 ICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVN 551
Query: 403 ILTYNAL 409
+ Y ++
Sbjct: 552 LKLYKSI 558
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/465 (29%), Positives = 229/465 (49%), Gaps = 20/465 (4%)
Query: 86 YSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSI 145
Y+ L W L + R+ H L+L+F WV +P LET I
Sbjct: 24 YNILTIDRWGSLNHMDYRQARLRLVH--------GKLALKFLKWV-VKQPG---LETDHI 71
Query: 146 V------LHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
V HIL + R + + IL+ + S S +F +++ +YR+C+S+P V+D+L
Sbjct: 72 VQLVCITTHILVRARMYDPARHILKEL--SLMSGKSSFVFGALMTTYRLCNSNPSVYDIL 129
Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
+ Y +++ + F M YGF P + +CN L S++ S F KEM + +I
Sbjct: 130 IRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKI 189
Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
P+V T N++++ C G E++ + + ME G+ P++ TYNT++ +C KG A++
Sbjct: 190 CPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIE 249
Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
+ M+ G+ +V T+N LI C+ ++ + + +M+ + PN VTYNTLING+
Sbjct: 250 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 309
Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
G + + L EML G+ + +T+NALI G EG K+A + ++ L P+
Sbjct: 310 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 369
Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEM 499
+Y L+ G C + A Y M R+G + + ++ C+N D A +L EM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429
Query: 500 LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
+ + PD + S L +G G+ + A ++ ++ GL P G
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 167/351 (47%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ + Y + +F+ A + M+ G + + N + L S R+ ++
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRD 288
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
MR+ I PN T N +++ F G + A ++ M S G P+ T+N LI GH ++G
Sbjct: 289 MRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGN 348
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
A+K +ME G+ P+ +++ L+ G CK + A + MK V +TY
Sbjct: 349 FKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTG 408
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
+I+G + G + L EM ++GI DI+TY+ALI G CK G+ K A +V + +
Sbjct: 409 MIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVG 468
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
L PN YS LI C + A ++Y++MI G + F +L+++ C+ A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
E + M + P+++ L +G + G+ A +F +M G P F
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 19/424 (4%)
Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFD-----SILYSY-- 186
T+ T++ VLH K +FK++ +L +G+ D+D + D I Y
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV-DADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 187 ------RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
RM + + ++ L +++ K A+ +M +G P + N + +
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
AL + M ++P+ + +++ CK + A + M+ G T
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
Y +I G C G L A+ N M K+GI P+++T++ LI GFCK G+ A I +
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
+SPN + Y+TLI ++G + +YE M+ G D T+N L+ LCK GK
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
+A ++ + + ++PN ++ LI G +AF ++ M + G P + L+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
C+ A + L + A D+++ + L + + G A+ LF +M R +L
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 541 PKGF 544
P +
Sbjct: 646 PDSY 649
Score = 145 bits (366), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 175/423 (41%), Gaps = 59/423 (13%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ F+ L + F+ A F M G P S L L + D+A GFY
Sbjct: 334 VTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 393
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M+RN + T ++ CK G ++ AV + M G P + TY+ LI+G C G
Sbjct: 394 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 453
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM-------------- 359
A + + + G+ PN I ++TLI+ C+ G L EA RI+ M
Sbjct: 454 FKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNV 513
Query: 360 ------KATNVS---------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
KA V+ PN V+++ LINGYG G S+++EM + G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVG 573
Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
TY +L+ GLCK G ++A +K L + Y+ L+T C N +A
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAV 633
Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNED------FDRAAEVLLEMLEKCMAPDSIILS 512
L+ M++ P+ + + L+S C+ F + AE +L P+ ++ +
Sbjct: 634 SLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL-----PNKVMYT 688
Query: 513 ELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKL----RTINCAPENGEK 559
G+ G+ + + +M+ G P G+ ++ +T + PE G +
Sbjct: 689 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 748
Query: 560 ESG 562
G
Sbjct: 749 NGG 751
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 36/382 (9%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
FD L Y + + A F +M G P + L L + A F K +
Sbjct: 546 FDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLH 605
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ + N ++ A CK G + +AV +F M +P TY +LISG C KG
Sbjct: 606 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTV 665
Query: 316 LAM------------------------------------KFKNLMEKNGIQPNVITFNTL 339
+A+ F+ M+ G P+++T N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725
Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
I G+ + GK+ + N + EM N PN+ TYN L++GY + + LY ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785
Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
D LT ++L+LG+C+ + ++K + + T++ LI+ C AF
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845
Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
L K M G +K + ++S +N F + VL EM ++ ++P+S L +GL
Sbjct: 846 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 905
Query: 520 HCGKDELAMKLFRKMEIRGLLP 541
G + A + +M + P
Sbjct: 906 RVGDIKTAFVVKEEMIAHKICP 927
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/390 (22%), Positives = 163/390 (41%), Gaps = 9/390 (2%)
Query: 156 FKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDT 215
F + S+L+G+ K S+ D+ ++++ L A
Sbjct: 578 FFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDT--VMYNTLLTAMCKSGNLAKAVSL 635
Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR-RNRISPNVYTLNMVMHAFC 274
F +M LP + +S L + IA+ F KE R + PN +
Sbjct: 636 FGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMF 695
Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ---P 331
K G + + + M+++G P + T N +I G+ G + K +L+ + G Q P
Sbjct: 696 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE---KTNDLLPEMGNQNGGP 752
Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
N+ T+N L+ G+ K+ + + ++ + + P+ +T ++L+ G + E+G +
Sbjct: 753 NLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKIL 812
Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
+ + G++VD T+N LI C G+ A LVK + + + T A+++
Sbjct: 813 KAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRN 872
Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
+ + + M + G P + L++ C+ D A V EM+ + P ++
Sbjct: 873 HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932
Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
S + L CGK + A L R M L+P
Sbjct: 933 SAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 143/324 (44%)
Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
QM + G P I + N + +++ EM PN+ T N+++H + K
Sbjct: 709 QMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK 768
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
+ + +++++ G +P T ++L+ G C +L + +K G++ + TFN
Sbjct: 769 DVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFN 828
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
LI C G+++ A + M + +S + T + +++ + + + EM +
Sbjct: 829 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 888
Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
GI + Y LI GLC+ G K A + +++ + + P SA++ ++ A
Sbjct: 889 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948
Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
L + M++ P F LM C+N + A E+ + M + D + + L +G
Sbjct: 949 TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITG 1008
Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
L G LA +L+ +M+ G L
Sbjct: 1009 LCAKGDMALAFELYEEMKGDGFLA 1032
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 130/305 (42%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+++L Y+ RK + + + G LP +C+ + + +S ++I L K
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ + YT NM++ C G I A ++ K M S+G T + ++S
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
+ + M K GI P + LI G C+ G + A + EM A + P V + ++
Sbjct: 877 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+ G ++ L ML+ + I ++ L+ CK G +A L + L
Sbjct: 937 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
+ +Y+ LITG C + + AF+LY+ M G N ++ L+ E A++
Sbjct: 997 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056
Query: 496 LLEML 500
+L+ L
Sbjct: 1057 ILKDL 1061
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 139/322 (43%), Gaps = 4/322 (1%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--YKEMRR 256
+ Y+ K D +M + P + + N L S+R D++ F Y+ +
Sbjct: 725 MIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY--SKRKDVSTSFLLYRSIIL 782
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
N I P+ T + ++ C+ ++E +++ K G T+N LIS C G ++
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A +M GI + T + ++ + + E+ + EM +SP Y LIN
Sbjct: 843 AFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLIN 902
Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
G +VG+ + + EEM+ + I + +A++ L K GK +A L++ + K LVP
Sbjct: 903 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
++++ L+ C N A +L M G + + + +L++ C D A E+
Sbjct: 963 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1022
Query: 497 LEMLEKCMAPDSIILSELYSGL 518
EM ++ L GL
Sbjct: 1023 EEMKGDGFLANATTYKALIRGL 1044
>sp|Q9ZQF1|PP152_ARATH Pentatricopeptide repeat-containing protein At2g15630,
mitochondrial OS=Arabidopsis thaliana GN=At2g15630 PE=3
SV=1
Length = 627
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 235/462 (50%), Gaps = 12/462 (2%)
Query: 92 SDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILT 151
S W + ++ LTP V LL + K L+ F + ++ L +T + + +++
Sbjct: 57 SQWHIVEHVADKLTPSLVSTTLLSLVKTPNLAFNFVNHIDLYR---LDFQTQCLAIAVIS 113
Query: 152 KNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY-RMCDSSPLVFDLLFKTYAHRKKFR 210
K K +L+ ++ S + LFD ++ ++ R+ S ++FDLL + +
Sbjct: 114 KLSSPKPVTQLLKEVVTSRKNSI-RNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVD 172
Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
A + F M++ GF P E+CN L+ L R++ A FY +M R I NVYT N+++
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232
Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
+ CK G +++A ME G P++ TYNTL+ G +G + A + M+ G Q
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQ 292
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P++ T+N ++ C +G+ A+ + EMK + P+ V+YN LI G G+ EM +
Sbjct: 293 PDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAY 349
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+EM++ G+ TYN LI GL E K + A L++++ + +V ++ TY+ LI G C
Sbjct: 350 RDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQ 409
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
++++AF L+ M+ G +P + + L+ C+ A E+ +++ K M PD ++
Sbjct: 410 HGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVM 469
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
++ L G G + A L ++M++ + P T NC
Sbjct: 470 MNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDV----TYNC 507
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 172/357 (48%), Gaps = 4/357 (1%)
Query: 186 YRM-CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
YRM S+ F+++ K + A M +G P I + N + R+
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
+ A EM+ P++ T N ++ C G RA EV + M+ +G +P +YN L
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNIL 333
Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
I G N G L +A +++ M K G+ P T+NTLI G + K+ A + E++ +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
+ VTYN LINGY Q G+++ +L++EM+ +GI+ TY +LI LC++ KT++A
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
L + + + P+ + L+ G C N +RAF L K M P+ + LM C
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
F+ A E++ EM + + PD I + L SG G + A + +M G P
Sbjct: 514 GEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 156/296 (52%)
Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
A++ +M++ G +P S N + ++ +++A + EM + + P YT N ++H
Sbjct: 311 ASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIH 370
Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
IE A + + + G + TYN LI+G+C G A + M +GIQP
Sbjct: 371 GLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQP 430
Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
T+ +LI+ C+K K EA+ +F ++ + P++V NTL++G+ +GN + SL
Sbjct: 431 TQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLL 490
Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
+EM I D +TYN L+ GLC EGK ++A L+ ++ + + P+ +Y+ LI+G +
Sbjct: 491 KEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550
Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
+++ AF + M+ G P + L+ +N++ + A E+L EM + + P+
Sbjct: 551 GDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 108/199 (54%)
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A + EM + I P +T +++ C+ A E+F+ + G P + NTL+
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
GHC G + A M+ I P+ +T+N L+ G C +GK EA + EMK + P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+ ++YNTLI+GY + G+++ + +EML G +LTYNAL+ GL K + + A L+
Sbjct: 536 DHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELL 595
Query: 427 KDLDKNSLVPNASTYSALI 445
+++ +VPN S++ ++I
Sbjct: 596 REMKSEGIVPNDSSFCSVI 614
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 21/258 (8%)
Query: 139 TLETHSIVLHILTKNRKFKSSESILRGI------LDSDSFDL----------PSKLFDSI 182
T T++ ++H L K +++E ++R I LDS ++++ K F
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAF--A 418
Query: 183 LYSYRMCDS---SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLL 239
L+ M D + + L + K R A + F ++ G P + N +
Sbjct: 419 LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 240 DSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVT 299
+D A KEM I+P+ T N +M C G E A E+ M+ G P
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538
Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
+YNTLISG+ KG A ++ M G P ++T+N L+ G K + A + EM
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 360 KATNVSPNVVTYNTLING 377
K+ + PN ++ ++I
Sbjct: 599 KSEGIVPNDSSFCSVIEA 616
>sp|Q9SAA6|PPR34_ARATH Pentatricopeptide repeat-containing protein At1g11710,
mitochondrial OS=Arabidopsis thaliana GN=At1g11710 PE=2
SV=1
Length = 657
Score = 209 bits (531), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 133/470 (28%), Positives = 230/470 (48%), Gaps = 10/470 (2%)
Query: 72 PEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWV- 130
PEP +D+ F + +L W L S+ LT + VL + + L+LEF+ WV
Sbjct: 26 PEP--EDILFSALCL-NLRQRRWNTLHQFSSSLTNPLISRVLREFRSSPKLALEFYNWVL 82
Query: 131 --QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDL-PSKLFDSILYSYR 187
T S E +++H+L +R+F + SI+ ++ + L P + ++ SY+
Sbjct: 83 RSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVLSGLIRSYQ 142
Query: 188 MCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
C SSP VFD L + + A + Q R GF + + N F+ LL+ +D
Sbjct: 143 ACGSSPDVFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
YKEM NV T N+V+++FCK + A+ VF M G P+V ++N +I G
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 308 HCNKGLLSLAMKF---KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
C G + A++ +M N + PN +T+N++I GFCK G+L A RI +M + V
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
N TY L++ YG+ G+S+ L +EM G+ V+ + YN+++ L EG + A
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
+++D++ ++ + T + ++ G C + A + + + + LM F
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFV 442
Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+++ A ++L ML + ++ D+I L G GK E A++++ M
Sbjct: 443 RDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGM 492
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 151/327 (46%), Gaps = 15/327 (4%)
Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
C R YG ++++ + SS D AL EM + N N +++
Sbjct: 324 CNERTYG--ALVDAYGRAGSS-------DEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
G IE A+ V ++M S T ++ G C G + A++F+ + + + +++
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
NTL+ F + KL A++I M +S + +++ TLI+GY + G E +Y+ M++
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
+++ YN+++ GL K G A +V ++ +V TY+ L+ N E
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV----TYNTLLNESLKTGNVEE 550
Query: 457 AFQLYKSMIRSGCRPNKHI--FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
A + M + + + F ++++ C+ +++A EVL M+E+ + PDSI L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ E ++L + ++G+ P
Sbjct: 611 ITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 149/349 (42%), Gaps = 35/349 (10%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
S++ G + DL ++ ++ S C+ + L Y A +M
Sbjct: 296 SVINGFCKAGRLDLAERIRGDMVKSGVDCNERT--YGALVDAYGRAGSSDEALRLCDEMT 353
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G + N + L ++ A+ ++M + + +T +V+ C+ G ++
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
AVE + + + + +NTL+ L+ A + M G+ + I+F TLI
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL---------- 390
G+ K+GKL A I+ M N + N+V YN+++NG + G + ++
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV 533
Query: 391 -YEEMLRNGIK----------------------VDILTYNALILGLCKEGKTKKAAYLVK 427
Y +L +K V ++T+N +I LCK G +KA ++K
Sbjct: 534 TYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLK 593
Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIF 476
+ + +VP++ TY LIT ++ E+ +L+ +I G P++HI+
Sbjct: 594 FMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIY 642
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 5/276 (1%)
Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
+ ++ ++ G P V +++L+ G A + G +V N +
Sbjct: 137 LIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLL 194
Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
++ +++ EM + NV T+N +I + + S++ ML+ G+ +++
Sbjct: 195 NVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 405 TYNALILGLCKEGKTKKAAYLVKDL---DKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
++N +I G CK G + A L+ + N + PNA TY+++I G C + A ++
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
M++SG N+ + L+ + + D A + EM K + +++I + + L
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
G E AM + R M + + F + + NG
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNG 410
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/471 (30%), Positives = 228/471 (48%), Gaps = 21/471 (4%)
Query: 80 DFVNIAYSHLIHSD-W-----KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTH 133
DF ++H+D W +KL L+ L P V VL+++++D L+ +FF W T
Sbjct: 78 DFDRDWIRKVVHNDLWDDPGLEKLFDLT--LAPIWVPRVLVELKEDPKLAFKFFKWSMTR 135
Query: 134 KPSSLTLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYR-M 188
++E++ IV HIL R + + S+L+ ++ D D FD +L+S R +
Sbjct: 136 NGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFD--------VLWSTRNV 187
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
C VFD LF A F +M+ + P SCN L + D
Sbjct: 188 CVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVK 247
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
F+K+M P V+T N+++ CK G +E A +F+ M+ G +P TYN++I G
Sbjct: 248 RFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGF 307
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
G L + F M+ +P+VIT+N LI FCK GKL + EMK + PNV
Sbjct: 308 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
V+Y+TL++ + + G + Y +M R G+ + TY +LI CK G A L +
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNE 427
Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
+ + + N TY+ALI G C + + A +L+ M +G PN + L+ F + ++
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
DRA E+L E+ + + PD ++ GL K E A + +M+ G+
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 166/332 (50%), Gaps = 4/332 (1%)
Query: 214 DTFC---QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
DT C +M+D P + + N ++ ++ I L FY+EM+ N + PNV + + ++
Sbjct: 315 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLV 374
Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
AFCK G++++A++ + +M +G +P+ TY +LI +C G LS A + N M + G++
Sbjct: 375 DAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVE 434
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
NV+T+ LI G C ++ EA +F +M V PN+ +YN LI+G+ + N + L
Sbjct: 435 WNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
E+ GIK D+L Y I GLC K + A ++ ++ + + N+ Y+ L+
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK-CMAPDSI 509
N L M F +L+ C+N+ +A + + + ++
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
I + + GL + E A LF +M +GL+P
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 201/456 (44%), Gaps = 53/456 (11%)
Query: 139 TLETHSIVLHILTKNRKFKSSESIL-----RGILDS--------DSFDLPSKLFDSILYS 185
T+ T++I++ + K +++ + RG++ D F +L D++ +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 186 YRM----CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
M C+ + ++ L + K + + +M+ G P + S + + +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG------------------------ 277
+ A+ FY +MRR + PN YT ++ A CK+G
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTY 440
Query: 278 -----------IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEK 326
++ A E+F M++ G IP++ +YN LI G + A++ N ++
Sbjct: 441 TALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 327 NGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM 386
GI+P+++ + T I+G C K+ A + +EMK + N + Y TL++ Y + GN
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 387 GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA-YLVKDLDKNSLVPNASTYSALI 445
G L +EM I+V ++T+ LI GLCK KA Y + + L NA+ ++A+I
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
G C E A L++ M++ G P++ + LM + + A + +M E M
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMK 680
Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
D + + L GL HC + + A +M G+ P
Sbjct: 681 LDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 154/330 (46%), Gaps = 2/330 (0%)
Query: 191 SSPLVF--DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
+ P VF +++ A F +M+ G +P + N + R+D +
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
F++EM+ P+V T N +++ FCK G + +E ++ M+ G P+V +Y+TL+
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
C +G++ A+KF M + G+ PN T+ +LI CK G L +A R+ +EM V NV
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
VTY LI+G + L+ +M G+ ++ +YNALI G K +A L+ +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
L + P+ Y I G C + E A + M G + N I+ LM + ++ +
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
+L EM E + + L GL
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 129/283 (45%), Gaps = 13/283 (4%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLV-----FDLLFKTYAHRKKFRNATDT 215
+++ G+ D++ +LF + D++ ++ ++ L + K A +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKM-------DTAGVIPNLASYNALIHGFVKAKNMDRALEL 494
Query: 216 FCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCK 275
+++ G P + F+ L E+++ A EM+ I N +M A+ K
Sbjct: 495 LNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 276 LGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVI 334
G + + M+ + +V T+ LI G C L+S A+ + N + + G+Q N
Sbjct: 555 SGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAA 614
Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
F +I G CK ++ A +F +M + P+ Y +L++G + GN +L ++M
Sbjct: 615 IFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
G+K+D+L Y +L+ GL + +KA ++++ + P+
Sbjct: 675 AEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 99/219 (45%)
Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
+N P F+ L G L EA + FS+MK V P + N L++ + ++G ++
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244
Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
+++M+ G + + TYN +I +CKEG + A L +++ LVP+ TY+++I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
G + ++ M C P+ + L++ FC+ E EM +
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
P+ + S L G + A+K + M GL+P +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY 403
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 257 NRIS------PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
NRIS N ++ CK +E A +F+ M G +P T Y +L+ G+
Sbjct: 601 NRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFK 660
Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
+G + A+ ++ M + G++ +++ + +L++G +L +A EM + P+ V
Sbjct: 661 QGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVL 720
Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRN 397
+++ + ++G + L ++++
Sbjct: 721 CISVLKKHYELGCIDEAVELQSYLMKH 747
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 212/447 (47%), Gaps = 3/447 (0%)
Query: 95 KKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNR 154
K L +LS H + H L + + + + FF ++ + T+ET+ ++ L +
Sbjct: 75 KVLPSLSVHHVVDLINHNPLSLPQRSIFA--FFKFISSQPGFRFTVETYFVLARFLAVHE 132
Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
F ++S++ ++ + S +F S L R+ + D L TY +A
Sbjct: 133 MFTEAQSLIELVVSRKGKNSASSVFIS-LVEMRVTPMCGFLVDALMITYTDLGFIPDAIQ 191
Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
F R + F I C L ++ GFY E+ NVY N++M+ FC
Sbjct: 192 CFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFC 251
Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
K G I A +VF + P+V ++NTLI+G+C G L + K+ MEK+ +P+V
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF 311
Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
T++ LI CK+ K+ A+ +F EM + PN V + TLI+G+ + G ++ Y++M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371
Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
L G++ DI+ YN L+ G CK G A +V + + L P+ TY+ LI G C +
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431
Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
E A ++ K M ++G ++ F L+ C+ A L EML + PD + + +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491
Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLP 541
G + KL ++M+ G +P
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVP 518
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 165/325 (50%)
Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
VF++L + +A F ++ P + S N ++ +D +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
++R P+V+T + +++A CK ++ A +F M G IP+ + TLI GH G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
L + M G+QP+++ +NTL+ GFCK G L A I M + P+ +TY TL
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
I+G+ + G+ E + +EM +NGI++D + ++AL+ G+CKEG+ A ++++ + +
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
P+ TY+ ++ C + +++ F+L K M G P+ + +L++ C+ A
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 495 VLLEMLEKCMAPDSIILSELYSGLH 519
+L ML + PD I + L G H
Sbjct: 542 LLDAMLNIGVVPDDITYNTLLEGHH 566
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 129/263 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ L K A F +M G +P + + +D+ Y++M
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ P++ N +++ FCK G + A + M G P TY TLI G C G +
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
A++ + M++NGI+ + + F+ L+ G CK+G++ +A R EM + P+ VTY ++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+ + + G+++ G L +EM +G ++TYN L+ GLCK G+ K A L+ + +V
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 436 PNASTYSALITGQCVRKNSERAF 458
P+ TY+ L+ G NS + +
Sbjct: 553 PDDITYNTLLEGHHRHANSSKRY 575
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD----TF 216
+++ + + D LFD MC + D++F T H D ++
Sbjct: 315 ALINALCKENKMDGAHGLFDE------MCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESY 368
Query: 217 CQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKL 276
+M G P I N ++ + + A M R + P+ T ++ FC+
Sbjct: 369 QKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRG 428
Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITF 336
G +E A+E+ K M+ G ++ L+ G C +G + A + M + GI+P+ +T+
Sbjct: 429 GDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY 488
Query: 337 NTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
++ FCKKG ++ EM++ P+VVTYN L+NG ++G + L + ML
Sbjct: 489 TMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLN 548
Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
G+ D +TYN L+ G + + K Y+ K + +V + ++Y +++
Sbjct: 549 IGVVPDDITYNTLLEGHHRHANSSK-RYIQK--PEIGIVADLASYKSIV 594
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/352 (30%), Positives = 180/352 (51%), Gaps = 1/352 (0%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDY-GFLPIIESCNKFLSSLLDSERVDIA 247
C S + +++ + + +A + +M + GF P + N ++ L + V A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
+ M + P+VYT N V+ CKLG ++ AVEV M + P+ TYNTLIS
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 308 HCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
C + + A + ++ GI P+V TFN+LI G C A +F EM++ P+
Sbjct: 375 LCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPD 434
Query: 368 VVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVK 427
TYN LI+ G + ++ ++M +G ++TYN LI G CK KT++A +
Sbjct: 435 EFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFD 494
Query: 428 DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE 487
+++ + + N+ TY+ LI G C + E A QL MI G +P+K+ + L++ FC+
Sbjct: 495 EMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGG 554
Query: 488 DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
D +AA+++ M PD + L SGL G+ E+A KL R ++++G+
Sbjct: 555 DIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGI 606
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 156/316 (49%), Gaps = 1/316 (0%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
+ + A + QM P + N +S+L +V+ A + + I P+V T N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++ C A+E+F+ M S G P TYN LI C+KG L A+ ME +
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G +VIT+NTLI GFCK K EA IF EM+ VS N VTYNTLI+G + E
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
A L ++M+ G K D TYN+L+ C+ G KKAA +V+ + N P+ TY LI+G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISG 584
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA-P 506
C E A +L +S+ G H + ++ + A + EMLE+ A P
Sbjct: 585 LCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPP 644
Query: 507 DSIILSELYSGLHHCG 522
D++ ++ GL + G
Sbjct: 645 DAVSYRIVFRGLCNGG 660
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 169/346 (48%), Gaps = 2/346 (0%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R C + + ++ L T + AT+ + G LP + + N + L + +
Sbjct: 359 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 418
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A+ ++EMR P+ +T NM++ + C G ++ A+ + K ME G SV TYNTLI
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 478
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G C A + + ME +G+ N +T+NTLI G CK ++ +A ++ +M P
Sbjct: 479 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 538
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+ TYN+L+ + + G+ + A + + M NG + DI+TY LI GLCK G+ + A+ L+
Sbjct: 539 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLL 598
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI-FEMLMSTFCQ 485
+ + + Y+ +I G ++ + A L++ M+ P + + ++ C
Sbjct: 599 RSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCN 658
Query: 486 NEDFDR-AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKL 530
R A + L+E+LEK P+ L L GL +E +KL
Sbjct: 659 GGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKL 704
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 168/339 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
F+ L ++A + M G+ P + + N +S L V A+ +M
Sbjct: 298 FNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
SPN T N ++ CK +E A E+ + + S G +P V T+N+LI G C
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
+AM+ M G +P+ T+N LI C KGKL EA + +M+ + + +V+TYNTLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+G+ + + +++EM +G+ + +TYN LI GLCK + + AA L+ +
Sbjct: 478 DGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQK 537
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY++L+T C + ++A + ++M +GC P+ + L+S C+ + A+++
Sbjct: 538 PDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKL 597
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
L + K + + + GL K A+ LFR+M
Sbjct: 598 LRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 25/349 (7%)
Query: 206 RKKFRNATDTFCQMRDYGFLPIIESCNKF---------LSSLLDSERVDIALGFYKEMRR 256
+K + + C+M FL +IES +F + ++D + FY M
Sbjct: 103 KKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN 162
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
+ N L + HA M G P V+T+N LI C L
Sbjct: 163 LLVDGNSLKLVEISHA---------------KMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A+ M G+ P+ TF T++ G+ ++G L A RI +M S + V+ N +++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 377 GYGQVGNSEMGASLYEEML-RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
G+ + G E + +EM ++G D T+N L+ GLCK G K A ++ + +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY+++I+G C + A ++ MI C PN + L+ST C+ + A E+
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
+ K + PD + L GL +AM+LF +M +G P F
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 106/269 (39%), Gaps = 43/269 (15%)
Query: 315 SLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
S A++ NL K P + ++ + G + +I +MK++ T+
Sbjct: 64 SAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLI 123
Query: 374 LINGYGQVGNSEMGASLYEEMLRN------------------------------------ 397
LI Y Q + S+ + M+
Sbjct: 124 LIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVW 183
Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
GIK D+ T+N LI LC+ + + A +++D+ LVP+ T++ ++ G + + A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEML-EKCMAPDSIILSELYS 516
++ + M+ GC + +++ FC+ + A + EM + PD + L +
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
GL G + A+++ M L +G+D
Sbjct: 304 GLCKAGHVKHAIEIMDVM-----LQEGYD 327
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 113/348 (32%), Positives = 184/348 (52%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+++ L + + A D F +M G + + ++ L + Y++
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M+ + + PN+YT N VM+ CK G + A +VF M G ++ TYNTLI G C +
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK 318
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L+ A K + M+ +GI PN+IT+NTLI GFC GKL +A + ++K+ +SP++VTYN
Sbjct: 319 LNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
L++G+ + G++ A + +EM GIK +TY LI + +KA L +++
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
LVP+ TYS LI G C++ A +L+KSM+ C PN+ I+ ++ +C+ RA
Sbjct: 439 LVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL 498
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
++L EM EK +AP+ + L K + A +L KM G+ P
Sbjct: 499 KLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/436 (26%), Positives = 214/436 (49%), Gaps = 36/436 (8%)
Query: 142 THSIVLHILTKNR----KFKSSESILRGILDSDSFDLPSKLFDSIL-------------- 183
T S +LH LT++ KF+ E I+ + S S +L F+ ++
Sbjct: 76 TSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYL 135
Query: 184 -------------YSYRMCDSSPLVFD-----LLFKTYAHRKKFRNATDTFCQMRDYGFL 225
+S+ + S +V D +L K + + D ++ ++GF
Sbjct: 136 LTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFS 195
Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
P + + ++ A + EM + + N T ++++ K G+ ++ E+
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM 255
Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
++ M+ G P++ TYN +++ C G A + + M + G+ N++T+NTLI G C+
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
+ KL+EAN++ +MK+ ++PN++TYNTLI+G+ VG SL ++ G+ ++T
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
YN L+ G C++G T AA +VK++++ + P+ TY+ LI N E+A QL SM
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
G P+ H + +L+ FC + A+ + M+EK P+ +I + + G G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSY 495
Query: 526 LAMKLFRKMEIRGLLP 541
A+KL ++ME + L P
Sbjct: 496 RALKLLKEMEEKELAP 511
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 157/314 (50%), Gaps = 4/314 (1%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
LFK ++ F + + +M++ G P + + N ++ L R A + EMR
Sbjct: 243 LFKNGVKKQGF----EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
+S N+ T N ++ C+ + A +V M+S G P++ TYNTLI G C G L A+
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
++ G+ P+++T+N L+ GFC+KG A ++ EM+ + P+ VTY LI+ +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ N E L M G+ D+ TY+ LI G C +G+ +A+ L K + + + PN
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
Y+ +I G C +S RA +L K M PN + ++ C+ A ++ +
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 499 MLEKCMAPDSIILS 512
M++ + P + ILS
Sbjct: 539 MIDSGIDPSTSILS 552
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 151/270 (55%)
Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
++A F +MR+ G I + N + L +++ A +M+ + I+PN+ T N +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
+ FC +G + +A+ + ++++S G PS+ TYN L+SG C KG S A K ME+ GI
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
+P+ +T+ LI F + + +A ++ M+ + P+V TY+ LI+G+ G +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
L++ M+ + + + YN +ILG CKEG + +A L+K++++ L PN ++Y +I C
Sbjct: 465 LFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLC 524
Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
+ S+ A +L + MI SG P+ I ++
Sbjct: 525 KERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 85/176 (48%)
Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
S + +++L + + A +M + G P + + + S+ ++ A+
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
M + P+V+T ++++H FC G + A +FK+M P+ YNT+I G+C +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKE 491
Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
G A+K ME+ + PNV ++ +I CK+ K EA R+ +M + + P+
Sbjct: 492 GSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 1/131 (0%)
Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDR 491
N VP ++ ++ L+T V +S + + + +S + + F +L+ C+ + ++
Sbjct: 123 NGFVPGSNCFNYLLTF-VVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEK 181
Query: 492 AAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
+ ++L+E+ E +P+ +I + L G G+ E A LF +M GL+ IN
Sbjct: 182 SFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 552 CAPENGEKESG 562
+NG K+ G
Sbjct: 242 GLFKNGVKKQG 252
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 189 bits (481), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 113/382 (29%), Positives = 189/382 (49%), Gaps = 2/382 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+ILR + DS ++ D +L R C + + +L + +A +MR
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
D G P + + N ++ + R+D A+ F +M + PNV T N+++ + C G
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A ++ +M GF PSV T+N LI+ C KGLL A+ M ++G QPN +++N L+
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
GFCK+ K+ A M + P++VTYNT++ + G E + ++ G
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
++TYN +I GL K GKT KA L+ ++ L P+ TYS+L+ G + A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
+ R G RPN F +M C++ DRA + L+ M+ + P+ + L GL +
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAY 566
Query: 521 CGKDELAMKLFRKMEIRGLLPK 542
G + A++L ++ +GL+ K
Sbjct: 567 EGMAKEALELLNELCNKGLMKK 588
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 171/348 (49%), Gaps = 3/348 (0%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++++ Y + NA +M P + + N L SL DS ++ A+
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + P+V T +++ A C+ + A+++ M G P V TYN L++G C +G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A+KF N M +G QPNVIT N ++ C G+ +A ++ ++M SP+VVT+N
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LIN + G + E+M ++G + + L+YN L+ G CKE K +A ++ +
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
P+ TY+ ++T C E A ++ + GC P + ++ + +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
++L EM K + PD+I S L GL GK + A+K F + E G+ P
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP 517
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 159/317 (50%), Gaps = 4/317 (1%)
Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
L +ES N L ++ + ++ F + M + P++ ++ FC+LG +A +
Sbjct: 100 LEDVES-NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAK 158
Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
+ + +E G +P V TYN +ISG+C G ++ A+ +++++ + P+V+T+NT++ C
Sbjct: 159 ILEILEGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLC 215
Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
GKL +A + M + P+V+TY LI + L +EM G D++
Sbjct: 216 DSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVV 275
Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
TYN L+ G+CKEG+ +A + D+ + PN T++ ++ C A +L M
Sbjct: 276 TYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM 335
Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
+R G P+ F +L++ C+ RA ++L +M + P+S+ + L G K
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 525 ELAMKLFRKMEIRGLLP 541
+ A++ +M RG P
Sbjct: 396 DRAIEYLERMVSRGCYP 412
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 18/299 (6%)
Query: 142 THSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFK 201
TH+I+L + ++ +E +L D+ K F S + F++L
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLA--------DMLRKGFSP----------SVVTFNILIN 352
Query: 202 TYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISP 261
+ A D +M +G P S N L +++D A+ + + M P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 262 NVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFK 321
++ T N ++ A CK G +E AVE+ + S G P + TYNT+I G G A+K
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 322 NLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQV 381
+ M ++P+ IT+++L+ G ++GK+ EA + F E + + PN VT+N+++ G +
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKS 532
Query: 382 GNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
++ M+ G K + +Y LI GL EG K+A L+ +L L+ +S
Sbjct: 533 RQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
>sp|Q9XIM8|PP155_ARATH Pentatricopeptide repeat-containing protein At2g15980
OS=Arabidopsis thaliana GN=At2g15980 PE=2 SV=1
Length = 498
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 220/448 (49%), Gaps = 29/448 (6%)
Query: 80 DFVNIAYSHLIHSDWKKLTALS-THLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSL 138
D V+I H S W L +L + TP + + L ++ + LSL FF + + + S
Sbjct: 44 DAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSH 103
Query: 139 TLETHSIVLHILTKNRKFKSSESILRGIL-----DSDSFDLPSKLFDSILYSYRMCDSSP 193
+ S ++HIL+++R + I+R L D D D K+F S++ SY C S+P
Sbjct: 104 DTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDEDE-DRVLKVFRSLIKSYNRCGSAP 162
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF--Y 251
VFDLL K+ K+ A ++R G I +CN ++ + S R + G+ Y
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEV--SRRRGASNGYKMY 220
Query: 252 KEM-------------RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES-MGFIPS 297
+E+ +I PN T N +M +F + G E +++ ME +G P+
Sbjct: 221 REVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPN 280
Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
V +YN L+ +C +GL+S A K M+ G+ +++ +NT+I G C ++ +A +F
Sbjct: 281 VYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFR 340
Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
+M + +TY L+NGY + G+ + G +Y EM R G + D LT AL+ GLC +
Sbjct: 341 DMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Query: 418 KTKK---AAYLVKDLDKNSLV-PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
++ AA +VKD + ++ P+ + Y L+ C +RA + M+ G +P++
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQ 460
Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLE 501
+ + + D + +A + +EM E
Sbjct: 461 ETYRAFIDGYGIVGDEETSALLAIEMAE 488
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/242 (18%), Positives = 106/242 (43%), Gaps = 19/242 (7%)
Query: 320 FKNLME---KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
F++L++ + G P V F+ LI ++ A + ++++ ++ + T N LI
Sbjct: 148 FRSLIKSYNRCGSAPFV--FDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALIT 205
Query: 377 GYGQVGNSEMGASLYEEM-------------LRNGIKVDILTYNALILGLCKEGKTKKAA 423
+ + G +Y E+ + IK + T+N++++ +EG+T+
Sbjct: 206 EVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVE 265
Query: 424 YLVKDLDKN-SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
+ +++++ PN +Y+ L+ C R A ++++ M G + + ++
Sbjct: 266 RIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGG 325
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
C N + +A E+ +M K + + L +G G + + ++R+M+ +G
Sbjct: 326 LCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Query: 543 GF 544
G
Sbjct: 386 GL 387
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 186 bits (471), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 173/317 (54%)
Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
LP + ++F S++ +++ ++ L F K++ N I+ N+YTLN++++ FC+ A
Sbjct: 85 LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYS 144
Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
V + +G+ P TT+NTLI G +G +S A+ + M +NG QP+V+T+N+++ G C
Sbjct: 145 VLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGIC 204
Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
+ G A + +M+ NV +V TY+T+I+ + G + SL++EM GIK ++
Sbjct: 205 RSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV 264
Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
TYN+L+ GLCK GK A L+KD+ +VPN T++ L+ + A +LYK M
Sbjct: 265 TYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
I G PN + LM +C A +L M+ +PD + + L G +
Sbjct: 325 ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRV 384
Query: 525 ELAMKLFRKMEIRGLLP 541
+ MK+FR + RGL+
Sbjct: 385 DDGMKVFRNISKRGLVA 401
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 176/351 (50%), Gaps = 18/351 (5%)
Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
A F +M G + + N + L + + + K+M I PNV T N+++
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
F K G ++ A E++K M + G P++ TYNTL+ G+C + LS A +LM +N P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
+++TF +LI G+C ++ + ++F + + N VTY+ L+ G+ Q G ++ L+
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
+EM+ +G+ D++TY L+ GLC GK +KA + +DL K+ + Y+ +I G C
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486
Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP----- 506
E A+ L+ S+ G +PN + +++S C+ A +L +M E AP
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 546
Query: 507 DSIILSELYSG-----------LHHCG--KDELAMKLFRKMEIRGLLPKGF 544
+++I + L G + CG D ++K+ M + G L K F
Sbjct: 547 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSGELDKSF 597
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 163/313 (52%)
Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
G+ P + N + L +V A+ M N P+V T N +++ C+ G A
Sbjct: 153 GYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLA 212
Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
+++ + ME V TY+T+I C G + A+ ME GI+ +V+T+N+L+ G
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
CK GK ++ + +M + + PNV+T+N L++ + + G + LY+EM+ GI +
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
I+TYN L+ G C + + +A ++ + +N P+ T+++LI G C+ K + ++++
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
++ + G N + +L+ FCQ+ A E+ EM+ + PD + L GL G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Query: 523 KDELAMKLFRKME 535
K E A+++F ++
Sbjct: 453 KLEKALEIFEDLQ 465
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 178/381 (46%), Gaps = 35/381 (9%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
F+ L K K A +M + G P + + N ++ + S +AL ++M
Sbjct: 161 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 220
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG--- 312
+ +V+T + ++ + C+ G I+ A+ +FK ME+ G SV TYN+L+ G C G
Sbjct: 221 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 280
Query: 313 -----------------------LLSLAMKFKNLMEKN---------GIQPNVITFNTLI 340
LL + +K L E N GI PN+IT+NTL+
Sbjct: 281 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G+C + +L EAN + M SP++VT+ +LI GY V + G ++ + + G+
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
+ +TY+ L+ G C+ GK K A L +++ + ++P+ TY L+ G C E+A ++
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
++ + +S ++ ++ C+ + A + + K + P+ + + + SGL
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 521 CGKDELAMKLFRKMEIRGLLP 541
G A L RKME G P
Sbjct: 521 KGSLSEANILLRKMEEDGNAP 541
Score = 142 bits (357), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 170/346 (49%), Gaps = 13/346 (3%)
Query: 140 LETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLL 199
+ET I ++T N S++RG+ + ++ + L ++ R + + F++L
Sbjct: 254 METKGIKSSVVTYN-------SLVRGLCKAGKWNDGALLLKDMVS--REIVPNVITFNVL 304
Query: 200 FKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRI 259
+ K + A + + +M G P I + N + R+ A M RN+
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364
Query: 260 SPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK 319
SP++ T ++ +C + ++ ++VF+N+ G + + TY+ L+ G C G + LA +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 320 FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYG 379
M +G+ P+V+T+ L+ G C GKL +A IF +++ + + +V Y T+I G
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 380 QVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAS 439
+ G E +L+ + G+K +++TY +I GLCK+G +A L++ ++++ PN
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544
Query: 440 TYSALITGQCVRKNSERAFQLYKSMIRSGCRPN----KHIFEMLMS 481
TY+ LI + + +L + M G + K + +ML+S
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLS 590
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 92/192 (47%)
Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
K +A +F EM + P++V ++ + + + +++ NGI +I T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
+I C+ KT A ++ + K P+ +T++ LI G + A L M+ +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
GC+P+ + +++ C++ D A ++L +M E+ + D S + L G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 528 MKLFRKMEIRGL 539
+ LF++ME +G+
Sbjct: 248 ISLFKEMETKGI 259
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 178/352 (50%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
+ S + F+ L K +A + +M+D GF+P + + +E+ + ALG
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
Y+ + + N YT +++++A CK G IE+A E+ + G +P+ YNT+I G+C
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYC 400
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
KG L A MEK G++P+ + +N LI FC+ G++ A + ++MK VSP+V
Sbjct: 401 RKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVE 460
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TYN LI GYG+ + + +EM NG ++++Y LI LCK K +A + +D+
Sbjct: 461 TYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDM 520
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
+ + P Y+ LI G C + E AF+ K M++ G N + L+
Sbjct: 521 EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKL 580
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
A ++LLE+ K + PD + L SG G + + L+ +M+ G+ P
Sbjct: 581 SEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 180/367 (49%), Gaps = 4/367 (1%)
Query: 186 YRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVD 245
Y DS L+ D L KT K+FR + F + + F P K + + + V
Sbjct: 141 YPSSDSLTLLLDHLVKT----KQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
L + M+ +RI P+V+ N+++ CK + A ++F M + +PS+ TYNTLI
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
G+C G + K + M+ + I+P++ITFNTL+ G K G + +A + EMK
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
P+ T++ L +GY +E +YE + +G+K++ T + L+ LCKEGK +KA +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
+ LVPN Y+ +I G C + + A ++M + G +P+ + L+ FC+
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFD 545
+ + A + + +M K ++P + L G + + + ++ME G +P
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVS 496
Query: 546 KLRTINC 552
INC
Sbjct: 497 YGTLINC 503
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 173/350 (49%), Gaps = 10/350 (2%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
L ++ L + + + NA +M+ G P +E+ N + D KE
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M N PNV + +++ CK + A V ++ME G P V YN LI G C+KG
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A +F M K GI+ N++T+NTLI G GKL EA + E+ + P+V TYN+
Sbjct: 545 IEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNS 604
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL-DKN 432
LI+GYG GN + +LYEEM R+GIK + TY+ L++ LC TK+ L + L +
Sbjct: 605 LISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH-LLISLC----TKEGIELTERLFGEM 659
Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
SL P+ Y+ ++ V + E+AF L K MI +K + L+ +
Sbjct: 660 SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEV 719
Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCG-KDEL-AMKLFRKMEIRGLL 540
++ EM + M P++ + + G HC KD + A +R+M+ +G L
Sbjct: 720 RSLIDEMNAREMEPEADTYNIIVKG--HCEVKDYMSAYVWYREMQEKGFL 767
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 146/285 (51%), Gaps = 12/285 (4%)
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + + P+ N ++ FC+LG +E A + M+ G PSV TYN LI G+ K
Sbjct: 415 MEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYE 474
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
ME NG PNV+++ TLI CK KL EA + +M+ VSP V YN
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+G G E +EML+ GI+++++TYN LI GL GK +A L+ ++ +
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
L P+ TY++LI+G N +R LY+ M RSG +P + +L+S C E +
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTE 653
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHC----GKDELAMKLFRKM 534
+ EM + PD ++ Y+G+ HC G E A L ++M
Sbjct: 654 RLFGEM---SLKPDLLV----YNGVLHCYAVHGDMEKAFNLQKQM 691
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 190/402 (47%), Gaps = 48/402 (11%)
Query: 147 LHILTKNRKFKSSESILRGILDSDS--FDLPSKLFDSILYSYRMC--DSSPLVFDLLFKT 202
L +L + + +++ +L +L SDS F P +LF + S D S L+ +L
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN- 120
Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
K A D F +R+ G P +S L L+ +++ + + + + + P+
Sbjct: 121 --ESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
+ + A KL + + +E+F N
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELF-----------------------------------N 203
Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
M+ + I P+V +N LI G CK ++++A ++F EM A + P+++TYNTLI+GY + G
Sbjct: 204 RMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAG 263
Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
N E + E M + I+ ++T+N L+ GL K G + A ++K++ VP+A T+S
Sbjct: 264 NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
L G + +E A +Y++ + SG + N + +L++ C+ ++A E+L + K
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 503 CMAPDSIILSELYSGLHHCGKDELA---MKLFRKMEIRGLLP 541
+ P+ +I + + G +C K +L MK+ ME +G+ P
Sbjct: 384 GLVPNEVIYNTMIDG--YCRKGDLVGARMKI-EAMEKQGMKP 422
Score = 145 bits (366), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 198/425 (46%), Gaps = 26/425 (6%)
Query: 135 PSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLF--DSILYSYRMCD-- 190
PSS +L +++L L K ++F+ + ++ IL+SD PSK +I + ++ D
Sbjct: 142 PSSDSL---TLLLDHLVKTKQFRVTINVFLNILESDF--RPSKFMYGKAIQAAVKLSDVG 196
Query: 191 ---------------SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
S ++++L K+ +A F +M LP + + N +
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
+ + + + M+ + I P++ T N ++ K G++E A V K M+ +GF+
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
P T++ L G+ + A+ +G++ N T + L+ CK+GK+ +A I
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL-YEEMLRNGIKVDILTYNALILGLC 414
A + PN V YNT+I+GY + G+ +GA + E M + G+K D L YN LI C
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
+ G+ + A V + + P+ TY+ LI G + ++ F + K M +G PN
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ L++ C+ A V +M ++ ++P I + L G GK E A + ++M
Sbjct: 496 SYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEM 555
Query: 535 EIRGL 539
+G+
Sbjct: 556 LKKGI 560
Score = 136 bits (342), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 182/407 (44%), Gaps = 32/407 (7%)
Query: 142 THSIVLHILTKNRKFKSSESIL-----RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
T SI+L+ L K K + +E IL +G++ ++ +++
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNE-----------------------VIY 392
Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
+ + Y + A M G P + N + + ++ A +M+
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
+SP+V T N+++ + + ++ ++ K ME G +P+V +Y TLI+ C L
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A K ME G+ P V +N LI G C KGK+ +A R EM + N+VTYNTLI+
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
G G L E+ R G+K D+ TYN+LI G G ++ L +++ ++ + P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
TY LI+ C ++ E +L+ M +P+ ++ ++ + + D ++A +
Sbjct: 633 TLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKG 543
+M+EK + D + L G GK L +M R + P+
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ L + K A D ++ G P + + N +S + V + Y+E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M+R+ I P + T ++++ K GI E +F M P + YN ++ + G
Sbjct: 625 MKRSGIKPTLKTYHLLISLCTKEGI-ELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A + M + I + T+N+LI G K GKL E + EM A + P TYN
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
++ G+ +V + Y EM G +D+ N L+ GL +E ++K+A ++ +++
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGRM 800
Query: 434 L 434
L
Sbjct: 801 L 801
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 126/324 (38%), Gaps = 68/324 (20%)
Query: 192 SPLV--FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
SP V +++L Y + +F D +M D G +P + S ++ L ++ A
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
++M +SP V NM++ C G IE A K M G ++ TYNTLI G
Sbjct: 516 VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS---- 365
G LS A + + G++P+V T+N+LI G+ G + ++ EMK + +
Sbjct: 576 MTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLK 635
Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
P+++ YN +++ Y G+ E +L ++M+
Sbjct: 636 TYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKS 695
Query: 399 IKVDILTYNALI-----------------------------------LGLCKEGKTKKAA 423
I +D TYN+LI G C+ A
Sbjct: 696 IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAY 755
Query: 424 YLVKDLDKNSLVPNASTYSALITG 447
+++ + + + + L++G
Sbjct: 756 VWYREMQEKGFLLDVCIGNELVSG 779
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/196 (19%), Positives = 80/196 (40%)
Query: 349 LHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA 408
+ EA +F ++ + P+ + L++ + + +++ +L + + Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 409 LILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
I K K L + + + P+ Y+ LI G C K A QL+ M+
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 469 CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
P+ + L+ +C+ + +++ +V M + P I + L GL G E A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 529 KLFRKMEIRGLLPKGF 544
+ ++M+ G +P F
Sbjct: 305 NVLKEMKDLGFVPDAF 320
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/387 (29%), Positives = 192/387 (49%), Gaps = 13/387 (3%)
Query: 176 SKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
S+L D + C+ ++ + L H +F A D F M + LP I K L
Sbjct: 25 SRLLDLSFWVRAFCNYREILRNGL-----HSLQFNEALDLFTHMVESRPLPSIIDFTKLL 79
Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
+ + ++ D+ + ++ +S ++YT N++M+ FC+ A M +GF
Sbjct: 80 NVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFE 139
Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
P + T+ +LI+G C + AM N M + GI+P+V+ + T+I CK G ++ A +
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
F +M+ + P+VV Y +L+NG G SL M + IK D++T+NALI K
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
EGK A L ++ + S+ PN TY++LI G C+ + A Q++ M GC P+
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
+ L++ FC+ + D A ++ EM +K + ++I + L G GK +A ++F M
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 536 IRGLLPKGFDKLRTIN----CAPENGE 558
RG+ P +RT N C NG+
Sbjct: 380 SRGVPP----NIRTYNVLLHCLCYNGK 402
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 168/331 (50%), Gaps = 3/331 (0%)
Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
A F QM +YG P + ++ L +S R A + M + +I P+V T N ++
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
AF K G A E++ M M P++ TY +LI+G C +G + A + LME G P
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFP 315
Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
+V+ + +LI GFCK K+ +A +IF EM ++ N +TY TLI G+GQVG + ++
Sbjct: 316 DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVF 375
Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK---NSLVPNASTYSALITGQ 448
M+ G+ +I TYN L+ LC GK KKA + +D+ K + + PN TY+ L+ G
Sbjct: 376 SHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGL 435
Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
C E+A +++ M + + +++ C+ A + + K + P+
Sbjct: 436 CYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNV 495
Query: 509 IILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
+ + + SGL G A LFRKM+ G+
Sbjct: 496 VTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 179/384 (46%), Gaps = 2/384 (0%)
Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
R F + ILR L S F+ LF ++ S + S + F L A KKF
Sbjct: 35 RAFCNYREILRNGLHSLQFNEALDLFTHMVESRPL--PSIIDFTKLLNVIAKMKKFDVVI 92
Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
+ ++ G + +CN ++ S + +A F +M + P++ T +++ F
Sbjct: 93 NLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGF 152
Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
C +E A+ + M MG P V Y T+I C G ++ A+ + ME GI+P+V
Sbjct: 153 CLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDV 212
Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
+ + +L+ G C G+ +A+ + M + P+V+T+N LI+ + + G LY E
Sbjct: 213 VMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNE 272
Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
M+R I +I TY +LI G C EG +A + ++ P+ Y++LI G C K
Sbjct: 273 MIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKK 332
Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
+ A +++ M + G N + L+ F Q + A EV M+ + + P+ +
Sbjct: 333 VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNV 392
Query: 514 LYSGLHHCGKDELAMKLFRKMEIR 537
L L + GK + A+ +F M+ R
Sbjct: 393 LLHCLCYNGKVKKALMIFEDMQKR 416
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/383 (25%), Positives = 167/383 (43%), Gaps = 38/383 (9%)
Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
+LL + + A+ +M GF P I + ++ R++ A+ +M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
I P+V ++ + CK G + A+ +F ME+ G P V Y +L++G CN G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A M K I+P+VITFN LI F K+GK +A +++EM +++PN+ TY +LIN
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
G+ G + ++ M G D++ Y +LI G CK K A + ++ + L
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 437 NASTYSALITG-----------------------------------QCVRKNSERAFQLY 461
N TY+ LI G C ++A ++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 462 KSMIR---SGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
+ M + G PN + +L+ C N ++A V +M ++ M I + + G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 519 HHCGKDELAMKLFRKMEIRGLLP 541
GK + A+ LF + +G+ P
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKP 493
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 5/208 (2%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
S++ G D K+F + S + + + + L + + K A + F M
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEM--SQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR---NRISPNVYTLNMVMHAFCKLG 277
G P I + N L L + +V AL +++M++ + ++PN++T N+++H C G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
+E+A+ VF++M + TY +I G C G + A+ + G++PNV+T+
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVS 365
T+I G ++G HEA+ +F +MK VS
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKEDGVS 527
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 135/485 (27%), Positives = 231/485 (47%), Gaps = 11/485 (2%)
Query: 57 MKMNRNPI--PIPHRTLPE-PKGQDLDFVNIAYSHLIHS--DWKKLTALSTHLTPFRVKH 111
M++ NP+ PI + PK + S +I S + ++ L+ R+++
Sbjct: 48 MEVVENPLEAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLEN 107
Query: 112 VLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDS 171
++ +++ +++ F + + H P H +V K R KS S+L I++
Sbjct: 108 RVI-IERSFIVV--FRAYGKAHLPDKAVDLFHRMVDEFRCK-RSVKSFNSVLNVIINEGL 163
Query: 172 FDLPSKLFDSILYSYRMCDSSP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIE 229
+ + +D ++ S + SP L F+L+ K + A + F M + LP
Sbjct: 164 YHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGY 223
Query: 230 SCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM 289
+ + L ER+D A+ EM+ SP+ N+++ CK G + R ++ NM
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 290 ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
G +P+ TYNTLI G C KG L A+ M + PN +T+ TLI G K+ +
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRA 343
Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
+A R+ S M+ N Y+ LI+G + G +E SL+ +M G K +I+ Y+ L
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
+ GLC+EGK +A ++ + + +PNA TYS+L+ G E A Q++K M ++GC
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
NK + +L+ C A V +ML + PD++ S + GL G + A+K
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 530 LFRKM 534
L+ +M
Sbjct: 524 LYHEM 528
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 186/393 (47%), Gaps = 13/393 (3%)
Query: 156 FKSSESILRGILDS----DSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRN 211
FK +S L +++S FD KL I R+ F ++F+ Y
Sbjct: 73 FKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERS--FIVVFRAYGKAHLPDK 130
Query: 212 ATDTFCQMRD-YGFLPIIESCNKFLSSLLDSERVDIALGFY-----KEMRRNRISPNVYT 265
A D F +M D + ++S N L+ +++ L FY M N ISPN +
Sbjct: 131 AVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN-ISPNGLS 189
Query: 266 LNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLME 325
N+V+ A CKL ++RA+EVF+ M +P TY TL+ G C + + A+ + M+
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249
Query: 326 KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSE 385
G P+ + +N LI G CKKG L ++ M PN VTYNTLI+G G +
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLD 309
Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
SL E M+ + + +TY LI GL K+ + A L+ +++ N YS LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLI 369
Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
+G +E A L++ M GC+PN ++ +L+ C+ + A E+L M+
Sbjct: 370 SGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCL 429
Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
P++ S L G G E A++++++M+ G
Sbjct: 430 PNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTG 462
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 181/390 (46%), Gaps = 14/390 (3%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+++ G+ + D L D + C SP+++++L + T M
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEM--QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G +P + N + L ++D A+ + M ++ PN T +++ K
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
AV + +ME G+ + Y+ LISG +G AM M + G +PN++ ++ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G C++GK +EA I + M A+ PN TY++L+ G+ + G E +++EM + G
Sbjct: 405 DGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
+ Y+ LI GLC G+ K+A + + + P+ YS++I G C + + A +L
Sbjct: 465 RNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKL 524
Query: 461 YKSMI---RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI----ILSE 513
Y M+ +P+ + +L+ C +D RA ++L ML++ PD I L+
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNT 584
Query: 514 LYSGLHHCGK-----DELAMKLFRKMEIRG 538
L + C K +EL ++L ++ + G
Sbjct: 585 LSEKSNSCDKGRSFLEELVVRLLKRQRVSG 614
Score = 93.6 bits (231), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 118/279 (42%), Gaps = 24/279 (8%)
Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
++ +L K A + +M + G P I + + L + + A M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
+ PN YT + +M F K G+ E AV+V+K M+ G + Y+ LI G C G +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM---KATNVSPNVVTY 371
AM + M GI+P+ + ++++I G C G + A +++ EM + P+VVTY
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNA---------------------LI 410
N L++G + L ML G D++T N L+
Sbjct: 544 NILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELV 603
Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
+ L K + A +V+ + L P ST++ ++ C
Sbjct: 604 VRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREIC 642
Score = 40.4 bits (93), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 32/151 (21%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSP------LVFDLLFKTYAHRKKFRNATD 214
SI++G+ S D KL+ +L C P + +++L +K A D
Sbjct: 507 SIIKGLCGIGSMDAALKLYHEML-----CQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561
Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLD-SERVDIALGFYKEM-----RRNRIS-------- 260
M D G P + +CN FL++L + S D F +E+ +R R+S
Sbjct: 562 LLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEV 621
Query: 261 -------PNVYTLNMVMHAFCKLGIIERAVE 284
P T M++ CK I A++
Sbjct: 622 MLGKYLAPKTSTWAMIVREICKPKKINAAID 652
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 170/348 (48%), Gaps = 4/348 (1%)
Query: 161 SILRGILDSDSFDLPSKLFDSIL-YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
S+L G + + LFD IL ++ + + + L + + +A + F QM
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFK---PNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
G P + + N ++ L + R A ++M + RI PNV T ++ AF K+G +
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKL 274
Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
A E++ M M P V TY +LI+G C GLL A + LME+NG PN + + TL
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTL 334
Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
I GFCK ++ + +IF EM V N +TY LI GY VG ++ ++ +M
Sbjct: 335 IHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRA 394
Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
DI TYN L+ GLC GK +KA + + + K + N TY+ +I G C E AF
Sbjct: 395 PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFD 454
Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
L+ S+ G +PN + ++S FC+ A + +M E P+
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 180/347 (51%), Gaps = 4/347 (1%)
Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
H +F +A D F +M LP I + LS + R D+ + +++M+ I P +
Sbjct: 60 HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLC 119
Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
T N+VMH C RA M +GF P + T+ +L++G+C+ + A+ + +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
G +PNV+T+ TLI CK L+ A +F++M PNVVTYN L+ G ++G
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
A L +M++ I+ +++T+ ALI K GK +A L + + S+ P+ TY +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
I G C+ + A Q++ M R+GC PN+ I+ L+ FC+++ + ++ EM +K +
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
++I + L G G+ ++A ++F +M R P +RT N
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPP----DIRTYN 402
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 184/384 (47%), Gaps = 2/384 (0%)
Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNAT 213
R F S ILR L + F+ LF +++S + S + F L A ++
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPL--PSIIDFTRLLSVIAKMNRYDVVI 103
Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
F QM+ G P++ +CN + + S + A F +M + P++ T +++ +
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
C IE A+ +F + MGF P+V TY TLI C L+ A++ N M NG +PNV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
+T+N L+ G C+ G+ +A + +M + PNV+T+ LI+ + +VG LY
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNV 283
Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
M++ + D+ TY +LI GLC G +A + +++N PN Y+ LI G C K
Sbjct: 284 MIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKR 343
Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
E +++ M + G N + +L+ +C D A EV +M + PD +
Sbjct: 344 VEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNV 403
Query: 514 LYSGLHHCGKDELAMKLFRKMEIR 537
L GL GK E A+ +F M R
Sbjct: 404 LLDGLCCNGKVEKALMIFEYMRKR 427
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 160/348 (45%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ F L Y H + +A F Q+ GF P + + + L + ++ A+ + +
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M N PNV T N ++ C++G A + ++M P+V T+ LI G
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A + N+M + + P+V T+ +LI G C G L EA ++F M+ PN V Y T
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+G+ + E G ++ EM + G+ + +TY LI G C G+ A + +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
P+ TY+ L+ G C E+A +++ M + N + +++ C+ + A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
++ + K M P+ I + + SG G A LF+KM+ G LP
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLP 501
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 117/255 (45%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R + + + F L + K A + + M P + + ++ L +D
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A + M RN PN ++H FCK +E +++F M G + + TY LI
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQ 371
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G+C G +A + N M P++ T+N L+ G C GK+ +A IF M+ +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
N+VTY +I G ++G E L+ + G+K +++TY +I G C+ G +A L
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 427 KDLDKNSLVPNASTY 441
K + ++ +PN S Y
Sbjct: 492 KKMKEDGFLPNESVY 506
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/365 (29%), Positives = 180/365 (49%)
Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
++ + +K A T ++ G+ P N L+ L RV AL M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
P + TLN +++ C G + AV + M GF P+ TY +++ C G +LA
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
M+ ME+ I+ + + ++ +I G CK G L A +F+EM+ +++TYNTLI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
+ G + GA L +M++ I +++T++ LI KEGK ++A L+K++ + + PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
TY++LI G C E A Q+ MI GC P+ F +L++ +C+ D E+
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
EM + + +++ + L G GK E+A KLF++M R + P ++ +NG
Sbjct: 428 EMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Query: 558 EKESG 562
E E
Sbjct: 488 ELEKA 492
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 173/330 (52%), Gaps = 4/330 (1%)
Query: 211 NATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVM 270
NA + F +M GF I + N + ++ R D ++M + +ISPNV T ++++
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 271 HAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQ 330
+F K G + A ++ K M G P+ TYN+LI G C + L A++ +LM G
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P+++TFN LI G+CK ++ + +F EM V N VTYNTL+ G+ Q G E+ L
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
++EM+ ++ DI++Y L+ GLC G+ +KA + ++K+ + + Y +I G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A+ L+ S+ G + + + +++S C+ + +A + +M E+ APD +
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Query: 511 LSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
+ L H G D+ A +L +M+ G
Sbjct: 581 YNILIRA--HLGDDDATTAAELIEEMKSSG 608
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 167/332 (50%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K +A +M + GF P + L+ + S + +A+ ++M I + +
Sbjct: 208 KVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYS 267
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
+++ CK G ++ A +F ME GF + TYNTLI G CN G K M K
Sbjct: 268 IIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
I PNV+TF+ LI F K+GKL EA+++ EM ++PN +TYN+LI+G+ + E
Sbjct: 328 KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEA 387
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
+ + M+ G DI+T+N LI G CK + L +++ ++ N TY+ L+ G
Sbjct: 388 IQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQG 447
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C E A +L++ M+ RP+ +++L+ C N + ++A E+ ++ + M D
Sbjct: 448 FCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELD 507
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
I + G+ + K + A LF + ++G+
Sbjct: 508 IGIYMIIIHGMCNASKVDDAWDLFCSLPLKGV 539
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 166/342 (48%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
++F+ L + A + +M + G P + + N ++ L + +V A+
Sbjct: 159 VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDR 218
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M PN T V++ CK G A+E+ + ME Y+ +I G C G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A N ME G + ++IT+NTLI GFC G+ + ++ +M +SPNVVT++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+ + + G L +EM++ GI + +TYN+LI G CKE + ++A +V +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
P+ T++ LI G C + +L++ M G N + L+ FCQ+ + A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
++ EM+ + + PD + L GL G+ E A+++F K+E
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 35/369 (9%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K +A D F M LP + N+ S++ +++ ++ L K+M I+ ++YTL+
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++++ FC+ + A + +G+ P +NTL++G C + +S A++ + M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT----------------- 370
G +P +IT NTL+ G C GK+ +A + M T PN VT
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 371 ------------------YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
Y+ +I+G + G+ + +L+ EM G K DI+TYN LI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGG 307
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
C G+ A L++D+ K + PN T+S LI A QL K M++ G PN
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPN 367
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ L+ FC+ + A +++ M+ K PD + + L +G + + ++LFR
Sbjct: 368 TITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 533 KMEIRGLLP 541
+M +RG++
Sbjct: 428 EMSLRGVIA 436
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 152/307 (49%)
Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
LSS L + D A+ +++M ++R P V N + A K E + + K MES G
Sbjct: 60 LSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGI 119
Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
S+ T + +I+ C LS A + K G +P+ + FNTL+ G C + ++ EA
Sbjct: 120 AHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALE 179
Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
+ M P ++T NTL+NG G L + M+ G + + +TY ++ +C
Sbjct: 180 LVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMC 239
Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
K G+T A L++ +++ ++ +A YS +I G C + + AF L+ M G + +
Sbjct: 240 KSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ L+ FC +D A++L +M+++ ++P+ + S L GK A +L ++M
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 535 EIRGLLP 541
RG+ P
Sbjct: 360 MQRGIAP 366
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 2/327 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+++ G ++ +D +KL ++ R + + F +L ++ K R A +M
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIK--RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G P + N + R++ A+ M P++ T N++++ +CK I+
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
+E+F+ M G I + TYNTL+ G C G L +A K M ++P+++++ L+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILL 480
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G C G+L +A IF +++ + + ++ Y +I+G + L+ + G+K
Sbjct: 481 DGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
+D YN +I LC++ KA L + + + P+ TY+ LI ++ A +L
Sbjct: 541 LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAEL 600
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNE 487
+ M SG + +M+++ E
Sbjct: 601 IEEMKSSGFPADVSTVKMVINMLSSGE 627
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 9/216 (4%)
Query: 329 IQPNVITFNTLIFGF--CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG-NSE 385
+QP ++ TL C L R FS N+S Y ++ G VG ++
Sbjct: 17 VQPRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLS-----YRDKLSS-GLVGIKAD 70
Query: 386 MGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALI 445
L+ +M+++ ++ +N L + K + + L K ++ + + T S +I
Sbjct: 71 DAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMI 130
Query: 446 TGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMA 505
C + AF +++ G P+ IF L++ C A E++ M+E
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK 190
Query: 506 PDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
P I L+ L +GL GK A+ L +M G P
Sbjct: 191 PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
>sp|Q9LN69|PPR50_ARATH Putative pentatricopeptide repeat-containing protein At1g19290
OS=Arabidopsis thaliana GN=At1g19290 PE=3 SV=2
Length = 904
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/537 (26%), Positives = 249/537 (46%), Gaps = 23/537 (4%)
Query: 31 FRRLSTMVTTLDKNPTFVNPSVSENSMKMNRNPIPIPHRTLPEPKGQDLDFVNIAYSHLI 90
RR V P S SE S + R R PE + L+
Sbjct: 2 LRRSPARVVAYQLLPFLYTRSFSEASRTLRRELRGGNGRIRPE-------LLERVSRLLV 54
Query: 91 HSDWKKLTALSTHLTPFRVKHVLLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHIL 150
++ L LS + + +L +++ + LE F + + + ++HIL
Sbjct: 55 LGRYEALHDLSLDFSDELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHIL 114
Query: 151 TKNRKFKSSESILRGI--LDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKK 208
++ R ++ ++S L + L+ F ++ ++ ++ SP VFD++ K YA +
Sbjct: 115 SRARNYQQTKSYLCELVALNHSGF----VVWGELVRVFKEFSFSPTVFDMILKVYAEKGL 170
Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
+NA F M +YG +P + SCN LS+L+ +AL Y +M +SP+V+T ++
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230
Query: 269 VMHAFCKLGIIERAVEVFKNMES-MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
V++A+C+ G +++A+ K ES +G +V TYN+LI+G+ G + + LM +
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G+ NV+T+ +LI G+CKKG + EA +F +K + + Y L++GY + G
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
+++ M+ G++ + N+LI G CK G+ +A + ++ SL P+ TY+ L+ G
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDG 410
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + A +L M + P + +L+ + + F + ML++ + D
Sbjct: 411 YCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNAD 470
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
I S L L G AMKL+ + RGLL G K+ +N A E
Sbjct: 471 EISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKE 527
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 152/371 (40%), Gaps = 38/371 (10%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y + A F +M D+ P + N + + VD AL +M +
Sbjct: 372 LINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
+ P V T N+++ + ++G + ++K M G + +TL+ G + AM
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
K + G+ + IT N +I G CK K++EA I + P V TY L +GY
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+VGN + ++ E M R GI I YN LI G K K A LV +L L P
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTV 611
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA----- 493
+TY ALITG C ++A+ MI G N +I + ++ + + D A
Sbjct: 612 ATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK 671
Query: 494 -----------EVLLEMLE----------------------KCMAPDSIILSELYSGLHH 520
+ L E LE K + P++I+ + +GL
Sbjct: 672 IVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCK 731
Query: 521 CGKDELAMKLF 531
GK E A KLF
Sbjct: 732 AGKLEDARKLF 742
Score = 120 bits (301), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 153/340 (45%)
Query: 183 LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
L S R + + + L K Y + A F +++ + + +
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
++ A+ + M + N N +++ +CK G + A ++F M P TYN
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
TL+ G+C G + A+K + M + + P V+T+N L+ G+ + G H+ ++ M
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
V+ + ++ +TL+ ++G+ L+E +L G+ D +T N +I GLCK K +A
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
++ +++ P TY AL G N + AF + + M R G P ++ L+S
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISG 585
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCG 522
+ ++ A++++E+ + + P L +G + G
Sbjct: 586 AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIG 625
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 50/377 (13%)
Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
G L + N +S L E+V+ A + R P V T + H + K+G ++ A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 283 VEVFKNMESMGFIPSVTTYNTLISG-----HCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
V + ME G P++ YNTLISG H NK + L ++ + G+ P V T+
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNK-VADLVIELR----ARGLTPTVATYG 615
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNV--------------------------VTY 371
LI G+C G + +A EM ++ NV V +
Sbjct: 616 ALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDF 675
Query: 372 NTLINGYGQV-------GNSEMGASLYEEMLRNGIKVDILT-----YNALILGLCKEGKT 419
+ L+ GY + + + E + N +L YN I GLCK GK
Sbjct: 676 DLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKL 735
Query: 420 KKAAYLVKDL-DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
+ A L DL + +P+ TY+ LI G + + +AF L M G PN +
Sbjct: 736 EDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNA 795
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
L+ C+ + DRA +L ++ +K + P++I + L GL G AM+L KM +G
Sbjct: 796 LIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Query: 539 LLPKGFDKLRTINCAPE 555
L+ +G DK ++ E
Sbjct: 856 LV-RGSDKQGDVDIPKE 871
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 41/290 (14%)
Query: 219 MRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGI 278
M G P IE N +S ++ E+R ++P V T ++ +C +G+
Sbjct: 567 MERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGM 626
Query: 279 IERAVEVFKNMESMG--------------------------FIPSVTTYNTLISGH---- 308
I++A M G + + ++ L+ G+
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLK 686
Query: 309 ---------CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
C K +A +N K + PN I +N I G CK GKL +A ++FS++
Sbjct: 687 EFLEASATTCLK-TQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL 745
Query: 360 KATN-VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
+++ P+ TY LI+G G+ +L +EM GI +I+TYNALI GLCK G
Sbjct: 746 LSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGN 805
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
+A L+ L + + PNA TY+ LI G N A +L + MI G
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA-LGFYKEMRRNRISPNVYTLNMVM 270
A T +M + G + C+K +SL +++D A L K + + + P +L +
Sbjct: 630 AYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFL 689
Query: 271 HAFCKLGI-IERAVEVFKNMESMGF-IPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKN 327
A + ++ E +N +P+ YN I+G C G L A K F +L+ +
Sbjct: 690 EASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSD 749
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
P+ T+ LI G G +++A + EM + PN+VTYN LI G ++GN +
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
L ++ + GI + +TYN LI GL K G +A L + + + LV
Sbjct: 810 QRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLV 857
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 179 bits (453), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 176/364 (48%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L + H + +A QM + G+ P + N + L R A+ M
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
P++ T +V++ CK G I+ A+ + K ME P V YNT+I CN ++ A+
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
M+ GI+PNV+T+N+LI C G+ +A+R+ S+M ++PNVVT++ LI+ +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ G LY+EM++ I DI TY++LI G C + +A ++ + + PN
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ LI G C K + +L++ M + G N + L+ F Q + D A V +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
M+ + PD + S L GL + GK E A+ +F ++ + P + I + G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 559 KESG 562
E G
Sbjct: 517 VEDG 520
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 195/423 (46%), Gaps = 21/423 (4%)
Query: 130 VQTHKPSSLTLETHSIVLHILTKNRKFKSS---ESILRGILDSDSFDLPSKLFDSI---- 182
+ ++ + L L+ + + K+R F S +L I + FDL L + +
Sbjct: 52 ISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 111
Query: 183 ----LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
LY+Y +L + R + A +M G+ P I + N L+
Sbjct: 112 ISHNLYTY----------SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGF 161
Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
R+ A+ +M P+ +T N ++H + AV + M G P +
Sbjct: 162 CHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL 221
Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
TY +++G C +G + LA+ ME+ I+P V+ +NT+I C +++A +F+E
Sbjct: 222 VTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTE 281
Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
M + PNVVTYN+LI G + L +M+ I +++T++ALI KEGK
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 341
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
+A L ++ K S+ P+ TYS+LI G C+ + A +++ MI C PN +
Sbjct: 342 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 401
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
L+ FC+ + D E+ EM ++ + +++ + L G + + A +F++M G
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Query: 539 LLP 541
+LP
Sbjct: 462 VLP 464
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 204/424 (48%), Gaps = 21/424 (4%)
Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSS 192
S L T+SI+++ + + + ++L ++ + D L S L + + R+ D+
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNS-LLNGFCHGNRISDAV 171
Query: 193 PLVFDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL 238
LV ++ F T H + A +M G P + + ++ L
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
+D+AL K+M + +I P V N ++ A C + A+ +F M++ G P+V
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
TYN+LI CN G S A + + M + I PNV+TF+ LI F K+GKL EA +++ E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
M ++ P++ TY++LING+ + ++E M+ +++TYN LI G CK +
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
+ L +++ + LV N TY+ LI G + + A ++K M+ G P+ + +
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
L+ C N + A V+ E L++ M PD + + G+ GK E LF + ++
Sbjct: 472 LLDGLCNNGKVETAL-VVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 530
Query: 538 GLLP 541
G+ P
Sbjct: 531 GVKP 534
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 170/341 (49%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
++++ + + K +A + F +M + G P + + N + L + R A +
Sbjct: 257 VIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 316
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M +I+PNV T + ++ AF K G + A +++ M P + TY++LI+G C
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 376
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A LM PNV+T+NTLI GFCK ++ E +F EM + N VTY T
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTT 436
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+G+ Q + ++++M+ +G+ DI+TY+ L+ GLC GK + A + + L ++
Sbjct: 437 LIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK 496
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ P+ TY+ +I G C E + L+ S+ G +PN + +MS FC+ + A
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ EM E+ PDS + L G + +L R+M
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 158/313 (50%)
Query: 239 LDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
L+ ++D A+ + +M ++R P++ + ++ A K+ + + + + M+++G ++
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL 116
Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
TY+ LI+ C + LSLA+ M K G +P+++T N+L+ GFC ++ +A + +
Sbjct: 117 YTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
M P+ T+NTLI+G + + +L + M+ G + D++TY ++ GLCK G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
A L+K +++ + P Y+ +I C KN A L+ M G RPN +
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
L+ C + A+ +L +M+E+ + P+ + S L GK A KL+ +M R
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 539 LLPKGFDKLRTIN 551
+ P F IN
Sbjct: 357 IDPDIFTYSSLIN 369
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 166/338 (49%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ L + + ++ +A+ M + P + + + + + + ++ A Y E
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + I P+++T + +++ FC ++ A +F+ M S P+V TYNTLI G C
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ M+ M + G+ N +T+ TLI GF + + A +F +M + V P+++TY+
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
L++G G E ++E + R+ ++ DI TYN +I G+CK GK + L L
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ PN TY+ +++G C + E A L++ M G P+ + L+ ++ D +A
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA 591
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLF 531
E++ EM D+ + + + LH D+ +K+
Sbjct: 592 ELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKML 629
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 2/264 (0%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KL+D ++ R D + L + + A F M P + + N +
Sbjct: 347 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
++RVD + ++EM + + N T ++H F + + A VFK M S G +P
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
+ TY+ L+ G CN G + A+ ++++ ++P++ T+N +I G CK GK+ + +F
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ V PNVVTY T+++G+ + G E +L+ EM G D TYN LI ++
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRD 584
Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
G +A L++++ V +AST
Sbjct: 585 GDKAASAELIREMRSCRFVGDAST 608
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 2/216 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++++G + D +LF + S R + + + L + ++ NA F QM
Sbjct: 401 TLIKGFCKAKRVDEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G LP I + + L L ++ +V+ AL ++ ++R+++ P++YT N+++ CK G +E
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVE 518
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
++F ++ G P+V TY T++SG C KGL A M++ G P+ T+NTLI
Sbjct: 519 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLI 578
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
+ G + + EM++ + T + N
Sbjct: 579 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 166/320 (51%), Gaps = 2/320 (0%)
Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
G P + + ++ L D+AL +M + +I +V + V+ + CK ++ A
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
+ +F M++ G P V TY++LIS CN G S A + + M + I PNV+TFN+LI
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
F K+GKL EA ++F EM ++ PN+VTYN+LING+ + ++ M+ D
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK 462
++TYN LI G CK K L +D+ + LV N TY+ LI G + + A ++K
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 463 SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHC 521
M+ G PN + L+ C+N ++A V+ E L+K M PD + + G+
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 522 GKDELAMKLFRKMEIRGLLP 541
GK E LF + ++G+ P
Sbjct: 499 GKVEDGWDLFCSLSLKGVKP 518
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 176/345 (51%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
++ +++ + + + +A + F +M + G P + + + +S L + R A
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+M +I+PNV T N ++ AF K G + A ++F M P++ TYN+LI+G C
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
L A + LM P+V+T+NTLI GFCK K+ + +F +M + N V
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TY TLI+G+ Q + + ++++M+ +G+ +I+TYN L+ GLCK GK +KA + + L
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
K+ + P+ TY+ + G C E + L+ S+ G +P+ + ++S FC+
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ A + ++M E PDS + L G + +L ++M
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 159/327 (48%)
Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
+ SL VD AL + EM I P+V+T + ++ C G A + +M
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
P+V T+N+LI +G L A K + M + I PN++T+N+LI GFC +L EA +
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
IF+ M + + P+VVTYNTLING+ + G L+ +M R G+ + +TY LI G
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
+ A + K + + + PN TY+ L+ G C E+A +++ + +S P+ +
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIY 486
Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ ++ C+ + ++ + K + PD I + + SG G E A LF KM
Sbjct: 487 TYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKM 546
Query: 535 EIRGLLPKGFDKLRTINCAPENGEKES 561
+ G LP I +G+K +
Sbjct: 547 KEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 172/368 (46%), Gaps = 35/368 (9%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K A D F +M P I +K LS++ ++ D+ + F ++M +S N+YT N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++++ C+ + A+ + M +G+ PS+ T N+L++G C+ +S A+ + M +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEM- 386
G QP+ +TF TL+ G + K EA + M P++VTY +ING + G ++
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 387 ----------------------------------GASLYEEMLRNGIKVDILTYNALILG 412
+L+ EM GI+ D+ TY++LI
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
LC G+ A+ L+ D+ + + PN T+++LI A +L+ MI+ PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ L++ FC ++ D A ++ M+ K PD + + L +G K M+LFR
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 533 KMEIRGLL 540
M RGL+
Sbjct: 405 DMSRRGLV 412
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 149/301 (49%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
++ +A+ M + P + + N + + ++ A + EM + I PN+ T N
Sbjct: 290 RWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
+++ FC ++ A ++F M S +P V TYNTLI+G C + M+ M +
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G+ N +T+ TLI GF + A +F +M + V PN++TYNTL++G + G E
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
++E + ++ ++ DI TYN + G+CK GK + L L + P+ Y+ +I+G
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + E A+ L+ M G P+ + L+ ++ D +AE++ EM A D
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Query: 508 S 508
+
Sbjct: 590 A 590
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 140/284 (49%), Gaps = 2/284 (0%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R + + + F+ L +A K A F +M P I + N ++ +R+D
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A + M P+V T N +++ FCK + +E+F++M G + + TY TLI
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G A M +G+ PN++T+NTL+ G CK GKL +A +F ++ + + P
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
++ TYN + G + G E G L+ + G+K D++ YN +I G CK+G ++A L
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCR 470
+ ++ +P++ TY+ LI + + +L K M RS CR
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RS-CR 585
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 3/270 (1%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KLFD ++ R D + + ++ L + + A F M LP + + N ++
Sbjct: 331 KLFDEMIQ--RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
+++V + +++M R + N T ++H F + + A VFK M S G P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
++ TYNTL+ G C G L AM ++K+ ++P++ T+N + G CK GK+ + +F
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ V P+V+ YNT+I+G+ + G E +L+ +M +G D TYN LI ++
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRD 568
Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALIT 446
G +A L+K++ +ASTY L+T
Sbjct: 569 GDKAASAELIKEMRSCRFAGDASTY-GLVT 597
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P+++ F+ L+ K K +M+ VS N+ TYN +IN + ++
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAI 122
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G I+T N+L+ G C + +A LV + + P+ T++ L+ G
Sbjct: 123 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 182
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A L + M+ GC+P+ + +++ C+ + D A +L +M + + D +I
Sbjct: 183 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 242
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
S + L + A+ LF +M+ +G+ P F I+C
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 83/213 (38%), Gaps = 35/213 (16%)
Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
KL EA +F EM + P++V ++ L++ ++ ++ S E+M G+ ++ TYN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
+I N L C R A + M++
Sbjct: 105 IMI---------------------NCL--------------CRRSQLSFALAILGKMMKL 129
Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
G P+ L++ FC A ++ +M+E PD++ + L GL K A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGEKE 560
+ L +M ++G P IN + GE +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 177 bits (450), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 177/351 (50%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
++ +++ + + K +A + F +M + G P + + N + L + R A
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+M +I+PNV T + ++ AF K G + A +++ M P + TY++LI+G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
L A LM PNV+T+NTLI GFCK ++ E +F EM + N V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TYNTLI G Q G+ +M ++++M+ +G+ DI+TY+ L+ GLCK GK +KA + + L
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
K+ + P+ TY+ +I G C E + L+ S+ G +PN I+ ++S FC+
Sbjct: 492 QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
+ A + EM E P+S + L G + +L ++M G +
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFV 602
Score = 171 bits (433), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 171/346 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+++L + R + A +M G+ P I + + L+ +R+ A+ +M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
PN T N ++H AV + M + G P + TY T+++G C +G +
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
LA+ MEK I+ +V+ + T+I C +++A +F+EM + PNVVTYN+LI
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
G + L +M+ I +++T++ALI KEGK +A L ++ K S+
Sbjct: 298 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TYS+LI G C+ + A +++ MI C PN + L+ FC+ + + E+
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
EM ++ + +++ + L GL G ++A K+F+KM G+ P
Sbjct: 418 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 171/364 (46%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y H K+ A QM + P + N + L + A+ M
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
P+++T V++ CK G I+ A+ + K ME V Y T+I CN ++ A+
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
M+ GI+PNV+T+N+LI C G+ +A+R+ S+M ++PNVVT++ LI+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ G LY+EM++ I DI TY++LI G C + +A ++ + + PN
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ LI G C K E +L++ M + G N + L+ Q D D A ++ +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
M+ + PD I S L GL GK E A+ +F ++ + P + I + G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 559 KESG 562
E G
Sbjct: 516 VEDG 519
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 187/404 (46%), Gaps = 44/404 (10%)
Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
F L F + Y YR S ++ DL K +A D F +M LP I
Sbjct: 33 FSLRGVYFSAASYDYREKLSRNVLLDL---------KLDDAVDLFGEMVQSRPLPSIVEF 83
Query: 232 NKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMES 291
NK LS++ + D+ + + M+ RIS ++Y+ N++++ FC+ + A+ V M
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 292 MGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE 351
+G+ P + T ++L++G+C+ +S A+ + M QPN +TFNTLI G K E
Sbjct: 144 LGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 352 ANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS---------------------- 389
A + M A P++ TY T++NG + G+ ++ S
Sbjct: 204 AVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIID 263
Query: 390 -------------LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
L+ EM GI+ +++TYN+LI LC G+ A+ L+ D+ + + P
Sbjct: 264 ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP 323
Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
N T+SALI A +LY MI+ P+ + L++ FC ++ D A +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
M+ K P+ + + L G + E M+LFR+M RGL+
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 427
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 160/299 (53%), Gaps = 2/299 (0%)
Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
+D+AL K+M + +I +V ++ A C + A+ +F M++ G P+V TYN+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
LI CN G S A + + M + I PNV+TF+ LI F K+GKL EA +++ EM +
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAA 423
+ P++ TY++LING+ + ++E M+ +++TYN LI G CK + ++
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 424 YLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
L +++ + LV N TY+ LI G + + A +++K M+ G P+ + +L+
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 484 CQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
C+ ++A V+ E L+K M PD + + G+ GK E LF + ++G+ P
Sbjct: 476 CKYGKLEKAL-VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 533
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 162/330 (49%)
Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
+ +L + + V+ AL + EM I PNV T N ++ C G A + +M
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 294 FIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEAN 353
P+V T++ LI +G L A K + M K I P++ T+++LI GFC +L EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 354 RIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGL 413
+F M + + PNVVTYNTLI G+ + E G L+ EM + G+ + +TYN LI GL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 414 CKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNK 473
+ G A + K + + + P+ TYS L+ G C E+A +++ + +S P+
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 474 HIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRK 533
+ + +++ C+ + ++ + K + P+ II + + SG G E A LFR+
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 534 MEIRGLLPKGFDKLRTINCAPENGEKESGG 563
M+ G LP I +G+K +
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 163/326 (50%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ L + + ++ +A+ M + P + + + + + + ++ A Y E
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + I P+++T + +++ FC ++ A +F+ M S P+V TYNTLI G C
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ M+ M + G+ N +T+NTLI G + G A +IF +M + V P+++TY+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
L++G + G E ++E + ++ ++ DI TYN +I G+CK GK + L L
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ PN Y+ +I+G C + E A L++ M G PN + L+ ++ D +A
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA 590
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLH 519
E++ EM D+ +S + + LH
Sbjct: 591 ELIKEMRSCGFVGDASTISMVINMLH 616
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 152/309 (49%)
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
++D A+ + EM ++R P++ N ++ A K+ + + + + M+++ + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
LI+ C + L LA+ M K G +P+++T ++L+ G+C ++ EA + +M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
PN VT+NTLI+G + +L + M+ G + D+ TY ++ GLCK G A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
L+K ++K + + Y+ +I C KN A L+ M G RPN + L+
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
C + A+ +L +M+E+ + P+ + S L GK A KL+ +M R + P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 543 GFDKLRTIN 551
F IN
Sbjct: 360 IFTYSSLIN 368
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 131/269 (48%), Gaps = 2/269 (0%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KL+D ++ R D + L + + A F M P + + N +
Sbjct: 346 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
++RV+ + ++EM + + N T N ++ + G + A ++FK M S G P
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP 463
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
+ TY+ L+ G C G L A+ ++K+ ++P++ T+N +I G CK GK+ + +F
Sbjct: 464 DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ V PNV+ Y T+I+G+ + G E +L+ EM +G + TYN LI ++
Sbjct: 524 CSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRD 583
Query: 417 GKTKKAAYLVKDLDKNSLVPNASTYSALI 445
G +A L+K++ V +AST S +I
Sbjct: 584 GDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 35/211 (16%)
Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
KL +A +F EM + P++V +N L++ ++ ++ SL E M I D+ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
LI C R A + M++
Sbjct: 120 ILI-----------------------------------NCFCRRSQLPLALAVLGKMMKL 144
Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
G P+ L++ +C + A ++ +M P+++ + L GL K A
Sbjct: 145 GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 528 MKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
+ L +M RG P F +N + G+
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 178/367 (48%), Gaps = 4/367 (1%)
Query: 177 KLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCN 232
KL DS+ + M PL F L + KK+ + QM+ G + +CN
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
L+ ++ +AL F +M + P++ T +++ FC+ + A+ +F M M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
G+ P+V YNT+I G C + A+ N MEK+GI P+V+T+N+LI G C G+ +A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
R+ S M + P+V T+N LI+ + G YEEM+R + DI+TY+ LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
LC + +A + + P+ TYS LI G C K E +L+ M + G N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ +L+ +C+ + A E+ M+ + P+ I + L GL GK E A+ +
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420
Query: 533 KMEIRGL 539
M+ G+
Sbjct: 421 DMQKNGM 427
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 176/334 (52%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K ++ D F M LP I ++ LS++ ++ D+ + +++M+ I N+ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++++ FC+ + A+ M +G PS+ T+ +L++G C + A+ + M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G +PNV+ +NT+I G CK ++ A + + M+ + P+VVTYN+LI+G G
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
+ M + I D+ T+NALI KEG+ +A +++ + SL P+ TYS LI G
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C+ + A +++ M+ GC P+ + +L++ +C+++ + ++ EM ++ + +
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
++ + L G GK +A ++FR+M G+ P
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 164/345 (47%)
Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
++L + + A +M G P I + L+ +RV AL + +M
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
PNV N ++ CK ++ A+++ ME G P V TYN+LISG C+ G S
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A + + M K I P+V TFN LI K+G++ EA + EM ++ P++VTY+ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
G + ++ M+ G D++TY+ LI G CK K + L ++ + +V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
N TY+ LI G C A ++++ M+ G PN + +L+ C N ++A +L
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+M + M D + + + G+ G+ A ++ + +GL+P
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/352 (28%), Positives = 167/352 (47%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
+ S + F L + + +A F QM G+ P + N + L S++VD AL
Sbjct: 148 EPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALD 207
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
M ++ I P+V T N ++ C G A + M P V T+N LI
Sbjct: 208 LLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACV 267
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
+G +S A +F M + + P+++T++ LI+G C +L EA +F M + P+VV
Sbjct: 268 KEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVV 327
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TY+ LINGY + E G L+ EM + G+ + +TY LI G C+ GK A + + +
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
+ PN TY+ L+ G C E+A + M ++G + + +++ C+ +
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
A ++ + + + PD + + GL+ G A LFRKM+ G+LP
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 137/266 (51%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
++ +AT M P + + N + + + RV A FY+EM R + P++ T +
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++++ C ++ A E+F M S G P V TY+ LI+G+C + MK M +
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G+ N +T+ LI G+C+ GKL+ A IF M V PN++TYN L++G G E
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
+ +M +NG+ DI+TYN +I G+CK G+ A + L+ L+P+ TY+ ++ G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNK 473
+ A L++ M G PN+
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPNE 501
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 121/242 (50%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
F+ L + A + + +M P I + + + L R+D A + M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
P+V T +++++ +CK +E +++F M G + + TY LI G+C G L+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
+A + M G+ PN+IT+N L+ G C GK+ +A I ++M+ + ++VTYN +I
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
G + G +Y + G+ DI TY ++LGL K+G ++A L + + ++ ++
Sbjct: 439 RGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Query: 436 PN 437
PN
Sbjct: 499 PN 500
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 106/213 (49%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R D + + LL + A + F M G P + + + ++ S++V+
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
+ + EM + + N T +++ +C+ G + A E+F+ M G P++ TYN L+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G C+ G + A+ M+KNG+ +++T+N +I G CK G++ +A I+ + + P
Sbjct: 405 GLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
++ TY T++ G + G +L+ +M +GI
Sbjct: 465 DIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
C + + +L Y KK + FC+M G + + + + ++++A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
++ M + PN+ T N+++H C G IE+A+ + +M+ G + TYN +I G
Sbjct: 382 EIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGM 441
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPN 367
C G ++ A + G+ P++ T+ T++ G KKG EA+ +F +MK + PN
Sbjct: 442 CKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%)
Query: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
KL ++ +F M P++ ++ L++ ++ ++ L+E+M GI ++ T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 408 ALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRS 467
L+ C+ + A + + K P+ T+ +L+ G C A ++ M+
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 468 GCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELA 527
G +PN I+ ++ C+++ D A ++L M + + PD + + L SGL G+ A
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 528 MKLFRKMEIRGLLPKGF 544
++ M R + P F
Sbjct: 241 TRMVSCMTKREIYPDVF 257
>sp|Q9FFE3|PP388_ARATH Pentatricopeptide repeat-containing protein At5g16420,
mitochondrial OS=Arabidopsis thaliana GN=At5g16420 PE=2
SV=1
Length = 535
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 123/467 (26%), Positives = 214/467 (45%), Gaps = 54/467 (11%)
Query: 113 LLKVQKDYVLSLEFFTWV-QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDS 171
++ Q++ L+L+ F + ++H + +T+ +L L++ R F ES++ + +S
Sbjct: 55 MITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS-- 112
Query: 172 FDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESC 231
Y C + L DLL + Y ++ ++ F ++ D+G + S
Sbjct: 113 ------------YPPIKCGEN-LFIDLL-RNYGLAGRYESSMRIFLRIPDFGVKRSVRSL 158
Query: 232 NKFLSSLLDSERVDIALGFYKEMRRN-RISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
N L+ L+ ++R D+ +K + + I+PN++T N+++ A CK IE A +V +
Sbjct: 159 NTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIP 218
Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
SMG +P++ TY T++ G+ +G + A + M G P+ T+ L+ G+CK G+
Sbjct: 219 SMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFS 278
Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGY------GQVGN--SEM---------------- 386
EA + +M+ + PN VTY +I G+ N EM
Sbjct: 279 EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVI 338
Query: 387 -----------GASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
L+ +ML+N D + LI LCKEG+ +A L + +K S +
Sbjct: 339 DALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS-I 397
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY+ LI G C + A +L+ M C+PN + +L+ +N + V
Sbjct: 398 PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRV 457
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
L EMLE P+ L+ GL GK+E AMK+ + G + K
Sbjct: 458 LEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDK 504
Score = 140 bits (352), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 136/288 (47%), Gaps = 2/288 (0%)
Query: 277 GIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMK-FKNLMEKNGIQPNVIT 335
G E ++ +F + G SV + NTL++ L FKN E GI PN+ T
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEML 395
N L+ CKK + A ++ E+ + + PN+VTY T++ GY G+ E + EEML
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEML 253
Query: 396 RNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSE 455
G D TY L+ G CK G+ +AA ++ D++KN + PN TY +I C K S
Sbjct: 254 DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSG 313
Query: 456 RAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
A ++ M+ P+ + ++ C++ D A + +ML+ PD+ +LS L
Sbjct: 314 EARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLI 373
Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGG 563
L G+ A KLF + E +G +P I E GE G
Sbjct: 374 HWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAG 420
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 176 bits (447), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 171/346 (49%), Gaps = 1/346 (0%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ +L + + KF A + QM + G +P + + N ++ ++ A+ + M
Sbjct: 361 YTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELME 420
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
++SPN T N ++ +CK + +A+ V M +P V TYN+LI G C G
Sbjct: 421 SRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
A + +LM G+ P+ T+ ++I CK ++ EA +F ++ V+PNVV Y LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+GY + G + + E+ML + LT+NALI GLC +GK K+A L + + K L
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P ST + LI + + A+ ++ M+ SG +P+ H + + T+C+ A ++
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ +M E ++PD S L G G+ A + ++M G P
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 137/478 (28%), Positives = 213/478 (44%), Gaps = 31/478 (6%)
Query: 69 RTLPEPKGQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVKHV--LLKVQKDYVLSLEF 126
R LPE + + + S L +W K +L + ++ HV L + D +L F
Sbjct: 50 RNLPEEESDSMSVPHRLLSILSKPNWHKSPSLKSMVSAISPSHVSSLFSLDLDPKTALNF 109
Query: 127 FTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
W+ + ++ +++ +L +L N G++ F L
Sbjct: 110 SHWISQNPRYKHSVYSYASLLTLLINNGYV--------GVV-----------FKIRLLMI 150
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
+ CDS V D L+ RK N + F + + II N L+SL VD
Sbjct: 151 KSCDS---VGDALYVLDLCRK--MNKDERF----ELKYKLIIGCYNTLLNSLARFGLVDE 201
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
Y EM +++ PN+YT N +++ +CKLG +E A + + G P TY +LI
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G+C + L A K N M G + N + + LI G C ++ EA +F +MK P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
V TY LI +L +EM GIK +I TY LI LC + K +KA L+
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
+ + L+PN TY+ALI G C R E A + + M PN + L+ +C++
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
+ +A VL +MLE+ + PD + + L G G + A +L M RGL+P +
Sbjct: 442 -NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Score = 144 bits (363), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 166/359 (46%), Gaps = 21/359 (5%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
++ L K Y + A +M + LP + + N + S D A M
Sbjct: 431 YNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ P+ +T ++ + CK +E A ++F ++E G P+V Y LI G+C G +
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 316 LA-MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
A + + ++ KN + PN +TFN LI G C GKL EA + +M + P V T L
Sbjct: 550 EAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
I+ + G+ + S +++ML +G K D TY I C+EG+ A ++ + +N +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNE------- 487
P+ TYS+LI G + AF + K M +GC P++H F L+ + +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 488 -----------DFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
+FD E+L +M+E + P++ +L G+ G +A K+F M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Score = 99.0 bits (245), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 140/328 (42%), Gaps = 37/328 (11%)
Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
T+ T +I++H L K+ F + S + +L S + +
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT------------------KPDAHTYTT 642
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
+TY + +A D +MR+ G P + + + + D + + A K MR
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 259 ISPNVYT-LNMVMH-----------------AFCKLGIIERAVEVFKNMESMGFIPSVTT 300
P+ +T L+++ H A + + VE+ + M P+ +
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKN-GIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
Y LI G C G L +A K + M++N GI P+ + FN L+ CK K +EA ++ +M
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
P + + LI G + G E G S+++ +L+ G D L + +I G+ K+G
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLV 882
Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITG 447
+ L ++KN ++ TYS LI G
Sbjct: 883 EAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 97.1 bits (240), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 19/299 (6%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
C + L F+ L K + AT +M G P + + + LL D A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
+++M + P+ +T + +C+ G + A ++ M G P + TY++LI G+
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI-------FG--------FCKKGKLHEAN 353
+ G + A M G +P+ TF +LI +G C + E +
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 354 RI---FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN-GIKVDILTYNAL 409
+ +M +V+PN +Y LI G +VGN + +++ M RN GI L +NAL
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
+ CK K +AA +V D+ +P + LI G + ER +++++++ G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861
>sp|Q9FND8|PP409_ARATH Pentatricopeptide repeat-containing protein At5g40400
OS=Arabidopsis thaliana GN=At5g40400 PE=2 SV=1
Length = 610
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 234/538 (43%), Gaps = 53/538 (9%)
Query: 74 PKGQDLD-FVNIAYSHLIHSDWK--------KLTALSTHLTPFRVKHVLLKVQKDYVLSL 124
P+ Q+ V++ S L HSD+ ++ +L HL + VLL+ Q D ++
Sbjct: 38 PQSQNPSKIVDVICSTLNHSDYSVLLPNLRDEVKSLIPHLGYPEISRVLLRFQSDASRAI 97
Query: 125 EFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILY 184
FF WV+ + + ++LHIL ++KF + L +++ S +F ++
Sbjct: 98 TFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVS 157
Query: 185 SYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERV 244
+ C+ P+VFD+L K Y F ++ D GF + +CN L+ LL + +
Sbjct: 158 ATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLM 217
Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
+ Y M R I PN YT N++ + FC + + ME GF P + TYNTL
Sbjct: 218 EDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
+S +C +G L A +M + + P+++T+ +LI G CK G++ EA++ F M +
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI------------------------- 399
P+ ++YNTLI Y + G + L EML N +
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 400 --------KVDI--LTYNALILGLCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQ 448
KVDI + LI+ LC+EGK A +L+ + +++ TY+ LI
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
E A L + + + L+ C+ A ++ EM + + PDS
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDS 517
Query: 509 IILSELYSGLHHC-----GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKES 561
I L G +C K E + LF ME R P+ ++ L C G K++
Sbjct: 518 FICGALVYG--YCKELDFDKAERLLSLF-AMEFRIFDPESYNSLVKAVCETGCGYKKA 572
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 136/362 (37%), Gaps = 72/362 (19%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
F++L + + FR D +M + GF P + + N +SS R+ A YK M
Sbjct: 239 FNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMY 298
Query: 256 RNRISPNVYTL-----------------------------------NMVMHAFCKLGIIE 280
R R+ P++ T N +++A+CK G+++
Sbjct: 299 RRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQ 358
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF-------------------- 320
++ ++ M +P T ++ G +G L A+ F
Sbjct: 359 QSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Query: 321 ----------------KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
++E+ G + T+N LI + + EA + ++K N
Sbjct: 419 VSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQ 478
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
+ TY LI ++G + SL EM + +K D AL+ G CKE KA
Sbjct: 479 VLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAER 538
Query: 425 LVKDLDKNSLVPNASTYSALITGQC-VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTF 483
L+ + + +Y++L+ C ++A +L + M R G PN+ + L+
Sbjct: 539 LLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
Query: 484 CQ 485
Q
Sbjct: 599 EQ 600
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 174/346 (50%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
L+++ + K +A + F +M G P + + + +S L + R A +
Sbjct: 257 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 316
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M +I+P+V+T + ++ AF K G + A +++ M PS+ TY++LI+G C
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 376
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A + M P+V+T+NTLI GFCK ++ E +F EM + N VTYN
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI G Q G+ +M +++EM+ +G+ +I+TYN L+ GLCK GK +KA + + L ++
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ P TY+ +I G C E + L+ ++ G +P+ + ++S FC+ + A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
+ EM E P+S + L G E + +L ++M G
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 172/346 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ +L + R + A +M G+ P I + + L+ S+R+ A+ +M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
PN T N ++H A+ + M + G P + TY +++G C +G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
LA N ME+ ++P V+ +NT+I G CK + +A +F EM+ + PNVVTY++LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+ G + L +M+ I D+ T++ALI KEGK +A L ++ K S+
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TYS+LI G C+ + A Q+++ M+ C P+ + L+ FC+ + + EV
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
EM ++ + +++ + L GL G ++A ++F++M G+ P
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 160/298 (53%), Gaps = 2/298 (0%)
Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
D+A +M + ++ P V N ++ CK ++ A+ +FK ME+ G P+V TY++L
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
IS CN G S A + + M + I P+V TF+ LI F K+GKL EA +++ EM ++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
P++VTY++LING+ + ++E M+ D++TYN LI G CK + ++
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
+ +++ + LV N TY+ LI G + + A +++K M+ G PN + L+ C
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 485 QNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+N ++A V+ E L++ M P + + G+ GK E LF + ++G+ P
Sbjct: 478 KNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 200/435 (45%), Gaps = 25/435 (5%)
Query: 129 WVQTHKPSSLTLET--HSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY 186
+V ++P+++T T H + LH K+SE++ L D ++
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLH-------NKASEAM--------------ALIDRMVA-- 214
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
+ C + + ++ R A + +M P + N + L + +D
Sbjct: 215 KGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDD 274
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
AL +KEM I PNV T + ++ C G A + +M P V T++ LI
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
+G L A K + M K I P+++T+++LI GFC +L EA ++F M + + P
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+VVTYNTLI G+ + E G ++ EM + G+ + +TYN LI GL + G A +
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQN 486
K++ + + PN TY+ L+ G C E+A +++ + RS P + + +++ C+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 487 EDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDK 546
+ ++ + K + PD + + + SG G E A LF++M+ G LP
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Query: 547 LRTINCAPENGEKES 561
I +G++E+
Sbjct: 575 NTLIRARLRDGDREA 589
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 155/299 (51%)
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
++D A+ + EM ++R P++ + ++ A K+ + + + + M+++G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
LI+ C + L LA+ M K G +PN++T ++L+ G+C ++ EA + +M T
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
PN VT+NTLI+G + +L + M+ G + D++TY ++ GLCK G T A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
L+ +++ L P Y+ +I G C K+ + A L+K M G RPN + L+S
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
C + A+ +L +M+E+ + PD S L GK A KL+ +M R + P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 139/282 (49%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R + F L + K A + +M P I + + ++ +R+D
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A ++ M P+V T N ++ FCK +E +EVF+ M G + + TYN LI
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G G +A + M +G+ PN++T+NTL+ G CK GKL +A +F ++ + + P
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
+ TYN +I G + G E G L+ + G+K D++ YN +I G C++G ++A L
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 427 KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG 468
K++ ++ +PN+ Y+ LI + + E + +L K M G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 157/312 (50%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
++ +A+ M + P + + + + + + ++ A Y EM + I P++ T +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
+++ FC ++ A ++F+ M S P V TYNTLI G C + M+ M +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G+ N +T+N LI G + G A IF EM + V PN++TYNTL++G + G E
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
++E + R+ ++ I TYN +I G+CK GK + L +L + P+ Y+ +I+G
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + + E A L+K M G PN + L+ ++ D + +AE++ EM A D
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Query: 508 SIILSELYSGLH 519
+ + + + LH
Sbjct: 606 ASTIGLVTNMLH 617
Score = 132 bits (333), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KL+D ++ R D S + + L + + A F M P + + N +
Sbjct: 347 KLYDEMVK--RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK 404
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
+RV+ + ++EM + + N T N+++ + G + A E+FK M S G P
Sbjct: 405 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPP 464
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
++ TYNTL+ G C G L AM ++++ ++P + T+N +I G CK GK+ + +F
Sbjct: 465 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ V P+VV YNT+I+G+ + G+ E +L++EM +G + YN LI ++
Sbjct: 525 CNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRD 584
Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
G + +A L+K++ +AST
Sbjct: 585 GDREASAELIKEMRSCGFAGDAST 608
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 175 bits (444), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 115/420 (27%), Positives = 204/420 (48%), Gaps = 19/420 (4%)
Query: 140 LETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSSPLV 195
L T+SI ++ + + + ++L ++ + D L S L + +S R+ D+ LV
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS-LLNGYCHSKRISDAVALV 176
Query: 196 FDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
++ F T H K A QM G P + + ++ L
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
+D+AL K+M + +I +V N ++ CK ++ A+ +F M++ G P V TY
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
++LIS CN G S A + + M + I PNV+TF+ LI F K+GKL EA +++ EM
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
++ P++ TY++LING+ + ++E M+ +++TY+ LI G CK + ++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
L +++ + LV N TY+ LI G ++ + A ++K M+ G PN + +L+
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLD 476
Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
C+N +A V + M PD + + G+ GK E +LF + ++G+ P
Sbjct: 477 GLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP 536
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 176/350 (50%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
++ ++++ + K +A + F +M + G P + + + +S L + R A
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+M +I+PNV T + ++ AF K G + A +++ M P + TY++LI+G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
L A LM PNV+T++TLI GFCK ++ E +F EM + N V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TY TLI+G+ Q + + ++++M+ G+ +ILTYN L+ GLCK GK KA + + L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
++++ P+ TY+ +I G C E ++L+ ++ G PN + ++S FC+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
+ A +L +M E P+S + L G E + +L ++M G
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 189/391 (48%), Gaps = 5/391 (1%)
Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKF 209
R F S+ R IL + D+ K+ D++ M S P + F+ L A KF
Sbjct: 41 RSFASASGDYREILRNRLSDII-KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
QM+ G + + + F++ ++ +AL +M + P++ TL+ +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
++ +C I AV + M MG+ P T+ TLI G S A+ + M + G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
QP+++T+ T++ G CK+G + A + +M+ + +VV YNT+I+G + + + +
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALN 279
Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
L+ EM GI+ D+ TY++LI LC G+ A+ L+ D+ + + PN T+SALI
Sbjct: 280 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 339
Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
A +LY MI+ P+ + L++ FC ++ D A + M+ K P+ +
Sbjct: 340 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
S L G + E M+LFR+M RGL+
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLV 430
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 159/314 (50%)
Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
L D +VD A+ + +M ++R P++ N ++ A K+ E + + + M+++G
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
+ TY+ I+ C + LSLA+ M K G +P+++T ++L+ G+C ++ +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
+M P+ T+ TLI+G + +L ++M++ G + D++TY ++ GLCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
A L+K ++K + + Y+ +I G C K+ + A L+ M G RP+ +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
L+S C + A+ +L +M+E+ + P+ + S L GK A KL+ +M R
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 538 GLLPKGFDKLRTIN 551
+ P F IN
Sbjct: 358 SIDPDIFTYSSLIN 371
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 156/312 (50%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
++ +A+ M + P + + + + + + ++ A Y EM + I P+++T +
Sbjct: 308 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
+++ FC ++ A +F+ M S P+V TY+TLI G C + M+ M +
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
G+ N +T+ TLI GF + A +F +M + V PN++TYN L++G + G
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
++E + R+ ++ DI TYN +I G+CK GK + L +L + PN Y+ +I+G
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + + E A L K M G PN + L+ ++ D + +AE++ EM A D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 508 SIILSELYSGLH 519
+ + + + LH
Sbjct: 608 ASTIGLVTNMLH 619
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 133/264 (50%), Gaps = 2/264 (0%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KL+D ++ R D + L + + A F M P + + + +
Sbjct: 349 KLYDEMIK--RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
++RV+ + ++EM + + N T ++H F + + A VFK M S+G P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
++ TYN L+ G C G L+ AM ++++ ++P++ T+N +I G CK GK+ + +F
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ VSPNV+ YNT+I+G+ + G+ E SL ++M +G + TYN LI ++
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRD 586
Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
G + +A L+K++ +AST
Sbjct: 587 GDREASAELIKEMRSCGFAGDAST 610
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 108/222 (48%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P+++ FN L+ K K + +M+ +S ++ TY+ IN + + + ++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G + DI+T ++L+ G C + A LV + + P+ T++ LI G +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A L M++ GC+P+ + +++ C+ D D A +L +M + + D +I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
+ + GL + A+ LF +M+ +G+ P F I+C
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++++G + + +LF + S R + + + L + + NA F QM
Sbjct: 403 TLIKGFCKAKRVEEGMELFREM--SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G P I + N L L + ++ A+ ++ ++R+ + P++YT N+++ CK G +E
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
E+F N+ G P+V YNT+ISG C KG A M+++G PN T+NTLI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
+ G + + EM++ + + T + N
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 124/439 (28%), Positives = 205/439 (46%), Gaps = 19/439 (4%)
Query: 106 PFRVKHV--LLKVQKDYVLSLEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESIL 163
P KHV ++K QKD + +LE F ++ TL T+ V+ L KF++ E +L
Sbjct: 4 PLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 164 RGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYG 223
D+ + + +L V+ K Y + K + A + F +M Y
Sbjct: 64 --------VDMRENVGNHMLEG---------VYVGAMKNYGRKGKVQEAVNVFERMDFYD 106
Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
P + S N +S L+DS D A Y MR I+P+VY+ + M +FCK A+
Sbjct: 107 CEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAAL 166
Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
+ NM S G +V Y T++ G + + + M +G+ + TFN L+
Sbjct: 167 RLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL 226
Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
CKKG + E ++ ++ V PN+ TYN I G Q G + + ++ G K D+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKS 463
+TYN LI GLCK K ++A + + L P++ TY+ LI G C + A ++
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGK 523
+ +G P++ + L+ C + +RA + E L K + P+ I+ + L GL + G
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 524 DELAMKLFRKMEIRGLLPK 542
A +L +M +GL+P+
Sbjct: 407 ILEAAQLANEMSEKGLIPE 425
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 189/399 (47%), Gaps = 18/399 (4%)
Query: 137 SLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVF 196
SL L T + +L +L K K E +L ++ LP+ L++Y
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGV--LPN------LFTY---------- 254
Query: 197 DLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRR 256
+L + R + A + + G P + + N + L + + A + +M
Sbjct: 255 NLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVN 314
Query: 257 NRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSL 316
+ P+ YT N ++ +CK G+++ A + + GF+P TY +LI G C++G +
Sbjct: 315 EGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNR 374
Query: 317 AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
A+ N GI+PNVI +NTLI G +G + EA ++ +EM + P V T+N L+N
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 377 GYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVP 436
G ++G L + M+ G DI T+N LI G + K + A ++ + N + P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 437 NASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVL 496
+ TY++L+ G C E + YK+M+ GC PN F +L+ + C+ D A +L
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLL 554
Query: 497 LEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
EM K + PD++ L G G + A LFRKME
Sbjct: 555 EEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 154/331 (46%)
Query: 214 DTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAF 273
+ F +M G + + NK L L V ++ + + PN++T N+ +
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 274 CKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNV 333
C+ G ++ AV + + G P V TYN LI G C A + M G++P+
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 334 ITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEE 393
T+NTLI G+CK G + A RI + P+ TY +LI+G G + +L+ E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
L GIK +++ YN LI GL +G +AA L ++ + L+P T++ L+ G C
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
A L K MI G P+ F +L+ + + A E+L ML+ + PD +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
L +GL K E M+ ++ M +G P F
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 206/444 (46%), Gaps = 31/444 (6%)
Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
Q KP +T ++ +++ L KN KF+ +E L G + ++ + S +++++ Y C
Sbjct: 280 QGPKPDVIT---YNNLIYGLCKNSKFQEAEVYL-GKMVNEGLEPDSYTYNTLIAGY--CK 333
Query: 191 ------SSPLVFDLLFKTYAHRK-KFRNATDTFCQMRDY-------------GFLPIIES 230
+ +V D +F + + +R+ D C + G P +
Sbjct: 334 GGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVIL 393
Query: 231 CNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNME 290
N + L + + A EM + P V T N++++ CK+G + A + K M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 291 SMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLH 350
S G+ P + T+N LI G+ + + A++ ++M NG+ P+V T+N+L+ G CK K
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 351 EANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALI 410
+ + M +PN+ T+N L+ + + L EEM + D +T+ LI
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 411 LGLCKEGKTKKAAYLVKDLDKNSLVPNAS-TYSALITGQCVRKNSERAFQLYKSMIRSGC 469
G CK G A L + +++ V +++ TY+ +I + N A +L++ M+
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--A 527
P+ + + +++ FC+ + + + LLEM+E P L + + L C +D + A
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCL--CVEDRVYEA 691
Query: 528 MKLFRKMEIRGLLPKGFDKLRTIN 551
+ +M +GL+P+ + + ++
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVD 715
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 139/289 (48%)
Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
M + + G ++ AV VF+ M+ P+V +YN ++S + G A K M GI
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
P+V +F + FCK + H A R+ + M + NVV Y T++ G+ + G
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
L+ +ML +G+ + + T+N L+ LCK+G K+ L+ + K ++PN TY+ I G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
R + A ++ +I G +P+ + L+ C+N F A L +M+ + + PDS
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
+ L +G G +LA ++ G +P F I+ GE
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 223 GFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERA 282
G+ P I + N + +++ AL M N + P+VYT N +++ CK E
Sbjct: 456 GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDV 515
Query: 283 VEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFG 342
+E +K M G P++ T+N L+ C L A+ M+ + P+ +TF TLI G
Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 343 FCKKGKLHEANRIFSEMK-ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
FCK G L A +F +M+ A VS + TYN +I+ + + N M L++EM+ +
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D TY ++ G CK G + ++ +N +P+ +T +I CV A +
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGII 695
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE--VLLEMLEK 502
M++ G P ++T C + + AA VL ++L+K
Sbjct: 696 HRMVQKGLVPEA------VNTICDVDKKEVAAPKLVLEDLLKK 732
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 210/466 (45%), Gaps = 53/466 (11%)
Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
E H+++L + K S S++ S+ D F + + S +++LL
Sbjct: 60 ELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
++ ++ + + M G P + N + +L DS VD A + EM
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
PN +T +++ +CK G+ ++ +E+ MES G +P+ YNT++S C +G + K
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKM 239
Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV----SPNVVTYNTLIN 376
M + G+ P+++TFN+ I CK+GK+ +A+RIFS+M+ PN +TYN ++
Sbjct: 240 VEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLK 299
Query: 377 GYGQVGNSEMGASLYE-----------------------------------EMLRNGIKV 401
G+ +VG E +L+E +M GI
Sbjct: 300 GFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP 359
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
I +YN L+ GLCK G A +V + +N + P+A TY L+ G C + A L
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
+ M+R+ C PN + +L+ + + A E+L +M EK D++ + + GL C
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGL--C 477
Query: 522 GKDEL--AMKLFRKMEIRGLLPKG----------FDKLRTINCAPE 555
G EL A+++ + M + G G D L NC P+
Sbjct: 478 GSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPD 523
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 190/434 (43%), Gaps = 55/434 (12%)
Query: 139 TLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDL 198
+L++++I L L ++ KF +E++L+ + D K +YSY ++
Sbjct: 325 SLQSYNIWLQGLVRHGKFIEAETVLKQMTD--------KGIGPSIYSY----------NI 366
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L +A M+ G P + L +VD A +EM RN
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
PN YT N+++H+ K+G I A E+ + M G+ T N ++ G C G L A+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 319 KFKNLME-----------------------KNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
+ M +N P++IT++TL+ G CK G+ EA +
Sbjct: 487 EIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
F+EM + P+ V YN I+ + + G + ++M + G + TYN+LILGL
Sbjct: 547 FAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGI 606
Query: 416 EGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHI 475
+ + + L+ ++ + + PN TY+ I C + E A L M++ PN
Sbjct: 607 KNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFS 666
Query: 476 FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD---SIILSELYSGLHHCGKDELAMKLFR 532
F+ L+ FC+ DFD A EV + C + S++ +EL + A +L +
Sbjct: 667 FKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLA----------AGQLLK 716
Query: 533 KME-IRGLLPKGFD 545
E + +L +GF+
Sbjct: 717 ATELLEAVLDRGFE 730
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 191/443 (43%), Gaps = 72/443 (16%)
Query: 162 ILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYA----------------- 204
++R + DS D +LFD + + C + F +L + Y
Sbjct: 153 LIRALCDSSCVDAARELFDEM--PEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 205 -----HRKKFRNATDTFC-------------QMRDYGFLPIIESCNKFLSSL------LD 240
++ + +FC +MR+ G +P I + N +S+L LD
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLD 270
Query: 241 SERV--DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSV 298
+ R+ D+ L Y + R PN T N+++ FCK+G++E A +F+++ + S+
Sbjct: 271 ASRIFSDMELDEYLGLPR----PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 299 TTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
+YN + G G A M GI P++ ++N L+ G CK G L +A I
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
MK V P+ VTY L++GY VG + SL +EM+RN + T N L+ L K G+
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYK---------------- 462
+A L++ +++ + T + ++ G C ++A ++ K
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 463 -------SMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
S+I + C P+ + L++ C+ F A + EM+ + + PDS+ +
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 516 SGLHHCGKDELAMKLFRKMEIRG 538
GK A ++ + ME +G
Sbjct: 567 HHFCKQGKISSAFRVLKDMEKKG 589
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 178/410 (43%), Gaps = 57/410 (13%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSL------LDSE 242
C SP +F+ L Y A +M G +P N + S+ L+ +
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
+D+A Y EM + N ++ C G E+A V + M GFIP +TY+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
+++ CN + LA M++ G+ +V T+ ++ FCK G + +A + F+EM+
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
+PNVVTY LI+ Y + L+E ML G +I+TY+ALI G CK G+ +KA
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKA 607
Query: 423 AYL----------------VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIR 466
+ K D NS PN TY AL+ G C E A +L +M
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 467 SGCRPNKHIFEMLMSTFCQNEDFDRAAE-------------------------------- 494
GC PN+ +++ L+ C+ D A E
Sbjct: 668 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDL 727
Query: 495 ---VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
VL +MLE AP+ +I +E+ GL GK + A KL + ME +G P
Sbjct: 728 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQP 777
Score = 148 bits (373), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 16/320 (5%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ ++ ++ A F +MR+ G P + + + + L +++V A ++ M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP----------------SVT 299
PN+ T + ++ CK G +E+A ++F+ M +P +V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 300 TYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEM 359
TY L+ G C + A K + M G +PN I ++ LI G CK GKL EA + +EM
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 360 KATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKT 419
+ TY++LI+ Y +V ++ + + +ML N +++ Y +I GLCK GKT
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
+A L++ +++ PN TY+A+I G + E +L + M G PN + +L
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 480 MSTFCQNEDFDRAAEVLLEM 499
+ C+N D A +L EM
Sbjct: 821 IDHCCKNGALDVAHNLLEEM 840
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 190/459 (41%), Gaps = 62/459 (13%)
Query: 124 LEFFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSIL 183
+ FF W T ++ ++ ++ ++ K E L+ I D D ++F L
Sbjct: 149 ISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-----EVFGEFL 203
Query: 184 YSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSER 243
++L + + F A + +++D+ F P + N + + L ++R
Sbjct: 204 -------------NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADR 250
Query: 244 VDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNT 303
+D A ++EM + + +TL ++ CK+G A+ + +E+ F+P Y
Sbjct: 251 LDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTK 307
Query: 304 LISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATN 363
LISG C L AM F N M PNV+T++TL+ G K +L R+ + M
Sbjct: 308 LISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEG 367
Query: 364 VSPNVVTYNTLINGYGQVGNS--------------------------------------- 384
P+ +N+L++ Y G+
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 385 --EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
++ Y EML G+ ++ + ++ LC GK +KA +++++ +P+ STYS
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
++ C E AF L++ M R G + + + +++ +FC+ ++A + EM E
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
P+ + + L K A +LF M G LP
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP 586
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 158/348 (45%), Gaps = 7/348 (2%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++L G S + KL D++ S C+ + +V+D L K A + +M
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAM--SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS 701
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
++GF + + + + +R D+A +M N +PNV ++ CK+G +
Sbjct: 702 EHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 761
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A ++ + ME G P+V TY +I G G + ++ M G+ PN +T+ LI
Sbjct: 762 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLI 821
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
CK G L A+ + EMK T+ + Y +I G+ + +G L +E+ ++
Sbjct: 822 DHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG--LLDEIGQDDTA 879
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNS--LVPNASTYSALITGQCVRKNSERAF 458
+ Y LI L K + + A L++++ S LV +STY++LI C+ E AF
Sbjct: 880 PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAF 939
Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAP 506
QL+ M + G P F L+ +N A +LL+ + + P
Sbjct: 940 QLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL-LLLDFISHMVCP 986
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 149/346 (43%), Gaps = 4/346 (1%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
+F+ K + F Q D P + + L S RV+ A M
Sbjct: 610 IFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG 669
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
PN + ++ CK+G ++ A EV M GF ++ TY++LI + LA
Sbjct: 670 CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLAS 729
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
K + M +N PNV+ + +I G CK GK EA ++ M+ PNVVTY +I+G+
Sbjct: 730 KVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF 789
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
G +G E L E M G+ + +TY LI CK G A L++++ + +
Sbjct: 790 GMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHT 849
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
+ Y +I G K + L + + P ++ +L+ + + + A +L E
Sbjct: 850 AGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEE 907
Query: 499 M--LEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
+ + S + L L K E A +LF +M +G++P+
Sbjct: 908 VATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPE 953
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 173 bits (439), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 178/358 (49%)
Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
H KF +A FC+M +P I + L+ + + DI + Y +M IS ++Y
Sbjct: 56 HCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 115
Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
+ +++H FC+ + A+ + M +GF PS+ T +L++G C A+ + M
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 175
Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
+ G PNV+ +NT+I G CK L+ A +F M+ + + VTYNTLI+G G
Sbjct: 176 DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 235
Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
A L +M++ I +++ + ALI KEG +A L K++ + S+VPN TY++L
Sbjct: 236 TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
I G C+ A ++ M+ GC P+ + L++ FC+++ + ++ EM + +
Sbjct: 296 INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 505 APDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
D+ + L G GK +A K+F +M G+ P ++C NG+ E
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 174/354 (49%), Gaps = 4/354 (1%)
Query: 161 SILRGILDSDSFDLPSKLFDSI-LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQM 219
S+L G + F L DS+ + + + ++++ + + NA + F M
Sbjct: 154 SLLNGFCQGNRFQEAVSLVDSMDGFGFV---PNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 220 RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGII 279
G + N +S L +S R A ++M + +I PNV ++ F K G +
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 270
Query: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
A ++K M +P+V TYN+LI+G C G L A +LM G P+V+T+NTL
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 340 IFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGI 399
I GFCK ++ + ++F EM + + TYNTLI+GY Q G + ++ M+ G+
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 400 KVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQ 459
DI+TYN L+ LC GK +KA +V+DL K+ + + TY+ +I G C + A+
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
L++S+ R G +P+ + ++S C+ A ++ M E P I E
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDE 504
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 170/403 (42%), Gaps = 40/403 (9%)
Query: 179 FDSILYSYRMCDSSPLVFDL-----LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNK 233
FD ++Y Y ++ + DL L + + A +M GF P I +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 234 FLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG 293
L+ R A+ M PNV N V++ CK + A+EVF ME G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 294 FIPSVTTYNTLISGHCNKG--------------------------LLSLAMKFKNLME-- 325
TYNTLISG N G L+ +K NL+E
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 326 -------KNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
+ + PNV T+N+LI GFC G L +A +F M + P+VVTYNTLI G+
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ E G L+ EM G+ D TYN LI G C+ GK A + + + P+
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ L+ C E+A + + + +S + + +++ C+ + A +
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ K + PD+I + SGL G A KL R+M+ G +P
Sbjct: 455 LTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 95/204 (46%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL 248
C + ++ L + K+ + FC+M G + + N + + ++++A
Sbjct: 320 CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 379
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
+ M +SP++ T N+++ C G IE+A+ + ++++ + TYN +I G
Sbjct: 380 KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
C L A + + G++P+ I + T+I G C+KG EA+++ MK P+
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 369 VTYNTLINGYGQVGNSEMGASLYE 392
Y+ + + ++E+ + +E
Sbjct: 500 RIYDETLRDHYTSLSAELIKAAHE 523
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 173 bits (438), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 179/348 (51%), Gaps = 3/348 (0%)
Query: 193 PLVFDLLFKTYAHRKKFRN---ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
P + +T++ ++ N D FC+M LP I +K LS + S+ D+ +
Sbjct: 31 PFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVIS 90
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+ M I ++Y+ N+V++ C+ A+ V M G+ P V T ++LI+G C
Sbjct: 91 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 150
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
+ A+ + ME+ G +P+V+ +NT+I G CK G +++A +F M+ V + V
Sbjct: 151 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 210
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TYN+L+ G G A L +M+ I +++T+ A+I KEGK +A L +++
Sbjct: 211 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
+ + P+ TY++LI G C+ + A Q+ M+ GC P+ + L++ FC+++
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRV 330
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
D ++ EM ++ + D+I + + G G+ + A ++F +M+ R
Sbjct: 331 DEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR 378
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 180/391 (46%), Gaps = 36/391 (9%)
Query: 187 RMCDSSPLV----FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSE 242
+M S PL F + A K + F M G + S N ++ L
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
R IAL +M + P+V T++ +++ FC+ + A+++ ME MGF P V YN
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
T+I G C GL++ A++ + ME++G++ + +T+N+L+ G C G+ +A R+ +M
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
++ PNV+T+ +I+ + + G LYEEM R + D+ TYN+LI GLC G+ +A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG-------------- 468
++ + +P+ TY+ LI G C K + +L++ M + G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 469 ------------------CRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
RPN + +L+ C N ++A + M + + D
Sbjct: 359 YFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITT 418
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ + G+ G E A LFR + +GL P
Sbjct: 419 YNIVIHGMCKIGNVEDAWDLFRSLSCKGLKP 449
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/458 (26%), Positives = 202/458 (44%), Gaps = 55/458 (12%)
Query: 129 WVQTH--KPSSLTLETHSIVLHILTKNRKFKSS---ESILRGILDSDSFDLPSKLFDSI- 182
W +T K SS+ LE + + ++R S +L I S ++DL LF +
Sbjct: 37 WGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHME 96
Query: 183 -------LYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFL 235
LYSY +++ +F A +M +G+ P + + + +
Sbjct: 97 VCGIGHDLYSY----------NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI 146
Query: 236 SSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFI 295
+ RV A+ +M P+V N ++ CK+G++ AVE+F ME G
Sbjct: 147 NGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVR 206
Query: 296 PSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRI 355
TYN+L++G C G S A + M I PNVITF +I F K+GK EA ++
Sbjct: 207 ADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKL 266
Query: 356 FSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCK 415
+ EM V P+V TYN+LING G + + + M+ G D++TYN LI G CK
Sbjct: 267 YEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
Query: 416 EGKTKKAAYLVKDLDKNSLV--------------------------------PNASTYSA 443
+ + L +++ + LV PN TYS
Sbjct: 327 SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSI 386
Query: 444 LITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC 503
L+ G C+ E+A L+++M +S + + +++ C+ + + A ++ + K
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 504 MAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ PD + + + SG + + + L+RKM+ GLLP
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 101/214 (47%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P+++ F+ ++ K +F M+ + ++ +YN +IN + + S+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G + D++T ++LI G C+ + A LV +++ P+ Y+ +I G C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
A +L+ M R G R + + L++ C + + AA ++ +M+ + + P+ I
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
+ + GK AMKL+ +M R + P F
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 166/339 (48%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ + + R + A +M G+ P I + + L+ S+R+ A+ +M
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
P+ +T ++H AV + M G P + TY T+++G C +G +
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
LA+ N ME I+ NV+ FNT+I CK + A +F+EM+ + PNVVTYN+LI
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
N G + L ML I +++T+NALI KEGK +A L +++ + S+
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY+ LI G C+ + A Q++K M+ C PN + L++ FC+ + + E+
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
EM ++ + +++ + + G G + A +F++M
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 164/337 (48%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y H K+ +A QM + G+ P + + L + A+ +M +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
P++ T V++ CK G I+ A+ + ME+ +V +NT+I C + +A+
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAV 278
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
ME GI+PNV+T+N+LI C G+ +A+R+ S M ++PNVVT+N LI+ +
Sbjct: 279 DLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAF 338
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ G L+EEM++ I D +TYN LI G C + +A + K + +PN
Sbjct: 339 FKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI 398
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ LI G C K E +L++ M + G N + ++ F Q D D A V +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
M+ + D + S L GL GK + A+ +F+ ++
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/416 (27%), Positives = 194/416 (46%), Gaps = 19/416 (4%)
Query: 140 LETHSIVLHILTKNRKFKSSESILRGIL----DSDSFDLPSKLFDSILYSYRMCDSSPLV 195
L T+SI ++ + + + ++L ++ + D L S L + +S R+ D+ LV
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS-LLNGYCHSKRISDAVALV 176
Query: 196 FDLL----------FKTYAH----RKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDS 241
++ F T H K A QM G P + + ++ L
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 242 ERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTY 301
+D+AL +M RI NV N ++ + CK +E AV++F ME+ G P+V TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 302 NTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKA 361
N+LI+ CN G S A + + M + I PNV+TFN LI F K+GKL EA ++ EM
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 362 TNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKK 421
++ P+ +TYN LING+ + +++ M+ +I TYN LI G CK + +
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 422 AAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMS 481
L +++ + LV N TY+ +I G + + A ++K M+ + + + +L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 482 TFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
C D A + + + M + I + + G+ GK A LF + I+
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK 532
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 194/391 (49%), Gaps = 5/391 (1%)
Query: 154 RKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSP----LVFDLLFKTYAHRKKF 209
R F S+ R IL + D+ K+ D++ M S P + F+ L A KF
Sbjct: 41 RSFASASGDYREILRNRLSDII-KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF 99
Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
QM+ G + + + F++ ++ +AL +M + P++ TL+ +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSL 159
Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGI 329
++ +C I AV + M MG+ P T+ TLI G S A+ + M + G
Sbjct: 160 LNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGC 219
Query: 330 QPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS 389
QP+++T+ T++ G CK+G + A + ++M+A + NVV +NT+I+ + + E+
Sbjct: 220 QPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVD 279
Query: 390 LYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQC 449
L+ EM GI+ +++TYN+LI LC G+ A+ L+ ++ + + PN T++ALI
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
A +L++ MI+ P+ + +L++ FC + D A ++ M+ K P+
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQ 399
Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
+ L +G C + E ++LFR+M RGL+
Sbjct: 400 TYNTLINGFCKCKRVEDGVELFREMSQRGLV 430
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 177/391 (45%), Gaps = 34/391 (8%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+++ G+ DL L + + + R+ ++ ++F+ + + + A D F +M
Sbjct: 228 TVVNGLCKRGDIDLALNLLNK-MEAARI-KANVVIFNTIIDSLCKYRHVEVAVDLFTEME 285
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G P + + N ++ L + R A M +I+PNV T N ++ AF K G +
Sbjct: 286 TKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A ++ + M P TYN LI+G C L A + M PN+ T+NTLI
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
GFCK ++ + +F EM + N VTY T+I G+ Q G+ + ++++M+ N +
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKN---------------------------- 432
DI+TY+ L+ GLC GK A + K L K+
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDL 525
Query: 433 ----SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
S+ P+ TY+ +I+G C ++ + A L++ M G PN + L+ ++ D
Sbjct: 526 FCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
+AE++ EM D+ +S + + LH
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNMLH 616
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 151/304 (49%)
Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
L D +VD A+ + +M ++R P++ N ++ A K+ E + + + M+++G
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
+ TY+ I+ C + LSLA+ M K G +P+++T ++L+ G+C ++ +A +
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
+M P+ T+ TLI+G + +L ++M++ G + D++TY ++ GLCK G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
A L+ ++ + N ++ +I C ++ E A L+ M G RPN +
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
L++ C + A+ +L MLEK + P+ + + L GK A KL +M R
Sbjct: 298 SLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQR 357
Query: 538 GLLP 541
+ P
Sbjct: 358 SIDP 361
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
++ L + K+ + + F +M G + + + + D A +K+M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
NR+ ++ T ++++H C G ++ A+ +FK ++ ++ YNT+I G C G +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
A +L I+P+V+T+NT+I G C K L EA+ +F +MK PN TYNTLI
Sbjct: 521 EAW---DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
+ + A L +EM +G D T +L+ + +G+ K+
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
Score = 90.9 bits (224), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 107/227 (47%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P+++ FN L+ K K + +M+ +S ++ TY+ IN + + + ++
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G + DI+T ++L+ G C + A LV + + P+ T++ LI G +
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A L M++ GC+P+ + +++ C+ D D A +L +M + + +I
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
+ + L E+A+ LF +ME +G+ P INC G
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 14/154 (9%)
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
Y E+LRN + DI+ K A L D+ K+ P+ ++ L++
Sbjct: 50 YREILRNRLS-DII-------------KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAK 95
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
E L + M G + + + + ++ FC+ A VL +M++ PD +
Sbjct: 96 MNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT 155
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
LS L +G H + A+ L +M G P F
Sbjct: 156 LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTF 189
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 178/360 (49%)
Query: 203 YAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPN 262
+ H +F +A F +M LP I + L++ + R + + F ++M IS +
Sbjct: 46 FLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
+Y+ +++H FC+ + A+ V M +G+ PS+ T+ +L+ G C + A
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVG 382
LM K+G +PNV+ +NTLI G CK G+L+ A + +EM+ + +VVTYNTL+ G G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 383 NSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYS 442
A + +M++ I D++T+ ALI K+G +A L K++ ++S+ PN TY+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 443 ALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
++I G C+ A + + M GC PN + L+S FC+ D ++ M +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 503 CMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESG 562
D + L G GK +A+ +F M R + P ++ NGE ES
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 181/386 (46%), Gaps = 11/386 (2%)
Query: 154 RKFKSSESILR-GILDSDSFDLPSKLFDSILYSYRMCDSSPLV----FDLLFKTYAHRKK 208
R F LR G L S F+ LF + M S PL F L A+ ++
Sbjct: 33 RAFSDYREKLRTGFLHSIRFEDAFALF------FEMVHSQPLPSIVDFTRLLTATANLRR 86
Query: 209 FRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNM 268
+ +M YG + S + R+ AL +M + P++ T
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGS 146
Query: 269 VMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNG 328
++H FC + I A + M G+ P+V YNTLI G C G L++A++ N MEK G
Sbjct: 147 LLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKG 206
Query: 329 IQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGA 388
+ +V+T+NTL+ G C G+ +A R+ +M +++P+VVT+ LI+ + + GN +
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQ 266
Query: 389 SLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQ 448
LY+EM+++ + + +TYN++I GLC G+ A + PN TY+ LI+G
Sbjct: 267 ELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Query: 449 CVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
C + + +L++ M G + + L+ +CQ A ++ M+ + + PD
Sbjct: 327 CKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDI 386
Query: 509 IILSELYSGLHHCGKDELAMKLFRKM 534
I L GL G+ E A+ F M
Sbjct: 387 ITHCILLHGLCVNGEIESALVKFDDM 412
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 153/309 (49%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+V++ L + A + +M G + + N L+ L S R A ++
Sbjct: 177 VVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRD 236
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + I+P+V T ++ F K G ++ A E++K M P+ TYN++I+G C G
Sbjct: 237 MMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGR 296
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A K +LM G PNV+T+NTLI GFCK + E ++F M + ++ TYNT
Sbjct: 297 LYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNT 356
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+GY QVG + ++ M+ + DI+T+ L+ GLC G+ + A D+ ++
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
Y+ +I G C E+A++L+ + G +P+ + +++ C+N A
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 494 EVLLEMLEK 502
E++ M E+
Sbjct: 477 ELIRRMKEE 485
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 149/307 (48%)
Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
K + L S R + A + EM ++ P++ ++ A L E + + ME
Sbjct: 41 KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100
Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
G + ++ LI C LS A+ M K G +P+++TF +L+ GFC ++ +A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160
Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
+ M + PNVV YNTLI+G + G + L EM + G+ D++TYN L+ G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
LC G+ AA +++D+ K S+ P+ T++ALI + N + A +LYK MI+S PN
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ +++ C + A + M K P+ + + L SG + MKLF+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 533 KMEIRGL 539
+M G
Sbjct: 341 RMSCEGF 347
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 161/351 (45%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
+ S + F L + + +A M G+ P + N + L + ++IAL
Sbjct: 138 EPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALE 197
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
EM + + +V T N ++ C G A + ++M P V T+ LI
Sbjct: 198 LLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFV 257
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
+G L A + M ++ + PN +T+N++I G C G+L++A + F M + PNVV
Sbjct: 258 KQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TYNTLI+G+ + + G L++ M G DI TYN LI G C+ GK + A + +
Sbjct: 318 TYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM 377
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
+ P+ T+ L+ G CV E A + M S + +++ C+ +
Sbjct: 378 VSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKV 437
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
++A E+ + + + PD+ + + GL G A +L R+M+ G++
Sbjct: 438 EKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 2/284 (0%)
Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
+ + ++ L + ++ +A M P + + + + +D A
Sbjct: 209 ADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
YKEM ++ + PN T N +++ C G + A + F M S G P+V TYNTLISG C
Sbjct: 269 YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCK 328
Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
++ MK M G ++ T+NTLI G+C+ GKL A IF M + V+P+++T
Sbjct: 329 FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIIT 388
Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
+ L++G G E +++M + + I+ YN +I GLCK K +KA L L
Sbjct: 389 HCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSG--CRPN 472
+ P+A TY+ +I G C A +L + M G C+ N
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMN 492
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 14/272 (5%)
Query: 178 LFDSILYSYRMCDSSPLVFDL--------------LFKTYAHRKKFRNATDTFCQMRDYG 223
L + YS R D++ ++ D+ L + + A + + +M
Sbjct: 217 LLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSS 276
Query: 224 FLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAV 283
P + N ++ L R+ A + M PNV T N ++ FCK +++ +
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336
Query: 284 EVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGF 343
++F+ M GF + TYNTLI G+C G L +A+ M + P++IT L+ G
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Query: 344 CKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDI 403
C G++ A F +M+ + +V YN +I+G + E L+ + G+K D
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
TY +ILGLCK G ++A L++ + + ++
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%)
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
GF + +A +F EM + P++V + L+ + E ++M GI
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D+ ++ LI C+ + A ++ + K P+ T+ +L+ G C+ AF L
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
M++SG PN ++ L+ C+N + + A E+L EM +K + D + + L +GL +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 522 GKDELAMKLFRKMEIRGLLP 541
G+ A ++ R M R + P
Sbjct: 225 GRWSDAARMLRDMMKRSINP 244
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 4/205 (1%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
SI+ G+ K FD L + + C + + ++ L + + F +M
Sbjct: 286 SIINGLCMHGRLYDAKKTFD--LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
GF I + N + ++ +AL + M R++P++ T +++H C G IE
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIE 403
Query: 281 RAVEVFKNM-ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
A+ F +M ES +I + YN +I G C + A + + G++P+ T+ +
Sbjct: 404 SALVKFDDMRESEKYI-GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 340 IFGFCKKGKLHEANRIFSEMKATNV 364
I G CK G EA+ + MK +
Sbjct: 463 ILGLCKNGPRREADELIRRMKEEGI 487
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 172 bits (435), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 172/346 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+++L + R + A +M G+ P I + + L+ +R+ A+ +M
Sbjct: 48 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 107
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
P+ T ++H AV + M G P++ TY +++G C +G +
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
LA N ME I+ +V+ FNT+I CK + +A +F EM+ + PNVVTY++LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+ G + L +M+ I +++T+NALI KEGK +A L D+ K S+
Sbjct: 228 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY++LI G C+ ++A Q+++ M+ C P+ + L+ FC+++ + E+
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
EM + + D++ + L GL H G + A K+F++M G+ P
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Score = 165 bits (418), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 163/337 (48%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y H K+ +A QM + G+ P + + L + A+ M +
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
PN+ T +V++ CK G I+ A + ME+ V +NT+I C + A+
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
ME GI+PNV+T+++LI C G+ +A+++ S+M ++PN+VT+N LI+ +
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAF 265
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ G L+++M++ I DI TYN+LI G C + KA + + + P+
Sbjct: 266 VKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDL 325
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ LI G C K E +L++ M G + + L+ + D D A +V +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
M+ + PD + S L GL + GK E A+++F M+
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 181/380 (47%), Gaps = 14/380 (3%)
Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
S L + + R+ D+ LV ++ F T H K A +M
Sbjct: 84 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 143
Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
G P + + ++ L +D+A +M +I +V N ++ + CK ++
Sbjct: 144 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 203
Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
A+ +FK ME+ G P+V TY++LIS C+ G S A + + M + I PN++TFN LI
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
F K+GK EA ++ +M ++ P++ TYN+LING+ + ++E M+
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D+ TYN LI G CK + + L +++ LV + TY+ LI G + + A +++
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
K M+ G P+ + +L+ C N ++A EV M + + D I + + G+
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 443
Query: 522 GKDELAMKLFRKMEIRGLLP 541
GK + LF + ++G+ P
Sbjct: 444 GKVDDGWDLFCSLSLKGVKP 463
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 170/342 (49%), Gaps = 13/342 (3%)
Query: 225 LPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVE 284
LP I NK LS++ ++ D+ + ++M+R IS N+YT N++++ FC+ I A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFC 344
+ M +G+ PS+ T ++L++G+C+ +S A+ + M + G +P+ ITF TLI G
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 345 KKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDIL 404
K EA + M PN+VTY ++NG + G+ ++ +L +M I+ D++
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 405 TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSM 464
+N +I LCK A L K+++ + PN TYS+LI+ C A QL M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 465 IRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKD 524
I PN F L+ F + F A ++ +M+++ + PD + L +G C D
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF--CMHD 304
Query: 525 EL--AMKLFRKMEIRGLLP---------KGFDKLRTINCAPE 555
L A ++F M + P KGF K + + E
Sbjct: 305 RLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 163/345 (47%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
++ ++F+ + + + +A + F +M G P + + + +S L R A
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+M +I+PN+ T N ++ AF K G A ++ +M P + TYN+LI+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
L A + M P++ T+NTLI GFCK ++ + +F EM + + V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TY TLI G G+ + ++++M+ +G+ DI+TY+ L+ GLC GK +KA + +
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
K+ + + Y+ +I G C + + L+ S+ G +PN + ++S C
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
A +L +M E PDS + L G + +L R+M
Sbjct: 482 QEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 147/291 (50%)
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M ++R P+++ N ++ A K+ + + + + M+ +G ++ TYN LI+ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+SLA+ M K G +P+++T ++L+ G+C ++ +A + +M P+ +T+ T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+G + +L + M++ G + +++TY ++ GLCK G A L+ ++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ + ++ +I C ++ + A L+K M G RPN + L+S C + A+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
++L +M+EK + P+ + + L GK A KL M R + P F
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIF 291
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 177 KLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLS 236
KL D ++ R D ++ L + + A F M P +++ N +
Sbjct: 276 KLHDDMIK--RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 237 SLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIP 296
S+RV+ ++EM + + T ++ G + A +VFK M S G P
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 297 SVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIF 356
+ TY+ L+ G CN G L A++ + M+K+ I+ ++ + T+I G CK GK+ + +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 357 SEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKE 416
+ V PNVVTYNT+I+G + +L ++M +G D TYN LI ++
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRD 513
Query: 417 GKTKKAAYLVKDLDKNSLVPNAST 440
G +A L++++ V +AST
Sbjct: 514 GDKAASAELIREMRSCRFVGDAST 537
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 107/227 (47%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P++ FN L+ K K + +M+ +S N+ TYN LIN + + + +L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G + I+T ++L+ G C + A LV + + P+ T++ LI G +
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A L M++ GC+PN + ++++ C+ D D A +L +M + D +I
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
+ + L + A+ LF++ME +G+ P I+C G
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++++G S + ++LF + S+R + + L + H NA F QM
Sbjct: 330 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G P I + + L L ++ +++ AL + M+++ I ++Y ++ CK G ++
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
++F ++ G P+V TYNT+ISG C+K LL A M+++G P+ T+NTLI
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
+ G + + EM++ + T + N
Sbjct: 508 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/473 (26%), Positives = 216/473 (45%), Gaps = 10/473 (2%)
Query: 76 GQDLDFVNIAYSHLIHSDWKKLTALSTHLTPFRVK-----HVLLKVQKDYVLSLEFFTWV 130
+D FV+ A ++ ALS+ L R+K +L+ D L L FF ++
Sbjct: 36 AEDKQFVD-AVKRIVRGKRSWEIALSSELVSRRLKTVHVEEILIGTIDDPKLGLRFFNFL 94
Query: 131 QTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCD 190
H+ + + I++H L K F + S+L+ PS +F+ + Y C
Sbjct: 95 GLHRGFDHSTASFCILIHALVKANLFWPASSLLQ--TLLLRALKPSDVFNVLFSCYEKCK 152
Query: 191 -SSPLVFDLLFKTYAHRKKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIAL 248
SS FDLL + Y ++ + F M LP + + + L L+ +A+
Sbjct: 153 LSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAM 212
Query: 249 GFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGH 308
+ +M I P+VY V+ + C+L + RA E+ +ME+ G ++ YN LI G
Sbjct: 213 ELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL 272
Query: 309 CNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNV 368
C K + A+ K + ++P+V+T+ TL++G CK + + EM SP+
Sbjct: 273 CKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSE 332
Query: 369 VTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKD 428
++L+ G + G E +L + ++ G+ ++ YNALI LCK K +A L
Sbjct: 333 AAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDR 392
Query: 429 LDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNED 488
+ K L PN TYS LI C R + A M+ +G + + + + L++ C+ D
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
A + EM+ K + P + + L G GK A++L+ +M +G+ P
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/407 (27%), Positives = 199/407 (48%), Gaps = 7/407 (1%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+++ G+ F++ ++ D +L R S V L+ + R K A + ++
Sbjct: 302 TLVYGLCKVQEFEIGLEMMDEML-CLRFSPSEAAVSSLV-EGLRKRGKIEEALNLVKRVV 359
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
D+G P + N + SL + A + M + + PN T ++++ FC+ G ++
Sbjct: 360 DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A+ M G SV YN+LI+GHC G +S A F M ++P V+T+ +L+
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G+C KGK+++A R++ EM ++P++ T+ TL++G + G L+ EM +K
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVK 539
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
+ +TYN +I G C+EG KA +K++ + +VP+ +Y LI G C+ + A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG-LH 519
+ + C N+ + L+ FC+ + A V EM+++ + D + L G L
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 520 HCGKD-ELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE-KESGGL 564
H KD +L L ++M RGL P I+ + G+ KE+ G+
Sbjct: 660 H--KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 167/358 (46%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
V++ L + +KF A F +M G P + + + ++D AL F E
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + +VY N +++ CK G I A M + P+V TY +L+ G+C+KG
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
++ A++ + M GI P++ TF TL+ G + G + +A ++F+EM NV PN VTYN
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
+I GY + G+ +EM GI D +Y LI GLC G+ +A V L K +
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
N Y+ L+ G C E A + + M++ G + + +L+ +++D
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
+L EM ++ + PD +I + + G + A ++ M G +P IN
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 2/390 (0%)
Query: 155 KFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATD 214
+ ++ ++L G++ F L +LF+ ++ D ++ + ++ K A +
Sbjct: 191 EVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDV--YIYTGVIRSLCELKDLSRAKE 248
Query: 215 TFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFC 274
M G I N + L ++V A+G K++ + P+V T +++ C
Sbjct: 249 MIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
Query: 275 KLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVI 334
K+ E +E+ M + F PS ++L+ G +G + A+ + G+ PN+
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
Query: 335 TFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEM 394
+N LI CK K HEA +F M + PN VTY+ LI+ + + G + S EM
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 395 LRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNS 454
+ G+K+ + YN+LI G CK G A + ++ L P TY++L+ G C +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 455 ERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSEL 514
+A +LY M G P+ + F L+S + A ++ EM E + P+ + + +
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 515 YSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
G G A + ++M +G++P +
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/342 (24%), Positives = 158/342 (46%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ + +L + R K A +M D G + N ++ + A GF E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M ++ P V T +M +C G I +A+ ++ M G PS+ T+ TL+SG GL
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A+K N M + ++PN +T+N +I G+C++G + +A EM + P+ +Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+G G + + + + +++ + Y L+ G C+EGK ++A + +++ +
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ + Y LI G K+ + F L K M G +P+ I+ ++ + DF A
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
+ M+ + P+ + + + +GL G A L KM+
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 173/384 (45%), Gaps = 47/384 (12%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y + K A + +M G P I + LS L + + A+ + EM
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN 537
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
+ PN T N+++ +C+ G + +A E K M G +P +Y LI G C G S A
Sbjct: 538 VKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING- 377
F + + K + N I + L+ GFC++GKL EA + EM V ++V Y LI+G
Sbjct: 598 VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS 657
Query: 378 ---------YG-------------------------QVGNSEMGASLYEEMLRNGIKVDI 403
+G + G+ + +++ M+ G +
Sbjct: 658 LKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 404 LTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSA----LITGQCVRKNSERAFQ 459
+TY A+I GLCK G +A L + S VPN TY L G+ + ++A +
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV---DMQKAVE 774
Query: 460 LYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLH 519
L+ ++++ G N + ML+ FC+ + A+E++ M+ ++PD I + + + L
Sbjct: 775 LHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL- 832
Query: 520 HCGKDEL--AMKLFRKMEIRGLLP 541
C ++++ A++L+ M +G+ P
Sbjct: 833 -CRRNDVKKAIELWNSMTEKGIRP 855
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 152/352 (43%), Gaps = 39/352 (11%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++++ + Y A + +M + G +P S + L + + A F
Sbjct: 543 VTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDG 602
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEV---------------------------- 285
+ + N ++H FC+ G +E A+ V
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 286 -------FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
K M G P Y ++I G A +LM G PN +T+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN--GYGQVGNSEMGASLYEEMLR 396
+I G CK G ++EA + S+M+ + PN VTY ++ G+V + + L+ +L+
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV-DMQKAVELHNAILK 781
Query: 397 NGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
G+ + TYN LI G C++G+ ++A+ L+ + + + P+ TY+ +I C R + ++
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDS 508
A +L+ SM G RP++ + L+ C + +A E+ EML + + P++
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A G + M PN T V++ CK G + A + M+ + +P+ TY +
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLD 760
Query: 307 GHCNKGLLSL--AMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
KG + + A++ N + K G+ N T+N LI GFC++G++ EA+ + + M V
Sbjct: 761 -ILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV 818
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
SP+ +TY T+IN + + + L+ M GI+ D + YN LI G C G+ KA
Sbjct: 819 SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATE 878
Query: 425 LVKDLDKNSLVPNAST 440
L ++ + L+PN T
Sbjct: 879 LRNEMLRQGLIPNNKT 894
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 206 RKKFRNATDTFC-QMRDYGFLPIIESCNKFLSSLLDSERVDI--ALGFYKEMRRNRISPN 262
+ F N + C +M+ +P + FL L E VD+ A+ + + + ++ N
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGE-VDMQKAVELHNAILKGLLA-N 786
Query: 263 VYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKN 322
T NM++ FC+ G IE A E+ M G P TY T+I+ C + + A++ N
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 323 LMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
M + GI+P+ + +NTLI G C G++ +A + +EM + PN T T
Sbjct: 847 SMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 3/211 (1%)
Query: 336 FNTLIFGFCKKGKLHEANRIFSEMKATNVS--PNVVTYNTLINGYGQVGNSEMGASLYEE 393
F+ LI + + ++ + +F +M T VS P V T + L++G + + + L+ +
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVF-KMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 394 MLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKN 453
M+ GI+ D+ Y +I LC+ +A ++ ++ N Y+ LI G C ++
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 454 SERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSE 513
A + K + +P+ + L+ C+ ++F+ E++ EML +P +S
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 514 LYSGLHHCGKDELAMKLFRKMEIRGLLPKGF 544
L GL GK E A+ L +++ G+ P F
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 189/386 (48%), Gaps = 37/386 (9%)
Query: 210 RNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMV 269
R A ++R LP +CNK + L++S ++L F + +P+ + N V
Sbjct: 3 REALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSV 62
Query: 270 MHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG-LLSLAMKFKNLMEKNG 328
+ CKLG ++ A ++ +M G P V +YN+LI GHC G + S ++ ++L +G
Sbjct: 63 VSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHG 122
Query: 329 I------------------------------------QPNVITFNTLIFGFCKKGKLHEA 352
PNV+T++T I FCK G+L A
Sbjct: 123 FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLA 182
Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
+ F MK +SPNVVT+ LI+GY + G+ E+ SLY+EM R + ++++TY ALI G
Sbjct: 183 LKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDG 242
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
CK+G+ ++A + + ++ + PN+ Y+ +I G R +S+ A + M+ G R +
Sbjct: 243 FCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ +++S C N A E++ +M + + PD +I + + + G+ + A+ ++
Sbjct: 303 ITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYH 362
Query: 533 KMEIRGLLPKGFDKLRTINCAPENGE 558
K+ RG P I+ +NG+
Sbjct: 363 KLIERGFEPDVVALSTMIDGIAKNGQ 388
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 177/385 (45%), Gaps = 34/385 (8%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR-DYGFL--PIIESCNKFLSSLLDSERVD 245
C+ + ++ L + R+A+ +R +GF+ P I S N + + +D
Sbjct: 87 CEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLD 146
Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
+ M + SPNV T + + FCK G ++ A++ F +M+ P+V T+ LI
Sbjct: 147 EVFVYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
G+C G L +A+ M + + NV+T+ LI GFCKKG++ A ++S M V
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
PN + Y T+I+G+ Q G+S+ +ML G+++DI Y +I GLC GK K+A +
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRP-------------- 471
V+D++K+ LVP+ ++ ++ + A +Y +I G P
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAK 385
Query: 472 ----------------NKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELY 515
N ++ +L+ C+ DF + ++ E + PD + +
Sbjct: 386 NGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWI 445
Query: 516 SGLHHCGKDELAMKLFRKMEIRGLL 540
+GL G A KL +M GLL
Sbjct: 446 AGLCKQGNLVDAFKLKTRMVQEGLL 470
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 172/399 (43%), Gaps = 30/399 (7%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
+ C + + + T+ + + A +F M+ P + + + + +++
Sbjct: 157 KCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEV 216
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A+ YKEMRR R+S NV T ++ FCK G ++RA E++ M P+ Y T+I
Sbjct: 217 AVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
G +G AMKF M G++ ++ + +I G C GKL EA I +M+ +++ P
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT--------------------- 405
++V + T++N Y + G + ++Y +++ G + D++
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 406 ---------YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSER 456
Y LI LCKEG + L + + LVP+ Y++ I G C + N
Sbjct: 397 CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456
Query: 457 AFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYS 516
AF+L M++ G + + L+ A +V EML ++PDS + L
Sbjct: 457 AFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIR 516
Query: 517 GLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPE 555
G A L M+ RGL+ D + C E
Sbjct: 517 AYEKEGNMAAASDLLLDMQRRGLVTAVSDADCSKQCGNE 555
Score = 99.0 bits (245), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 39/300 (13%)
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
++ A++ + +P T N I N L++KF + G P+ +FN
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
+++ CK G++ A I M P+V++YN+LI+G+ + G+ ASL E LR
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIR-SASLVLESLRA 119
Query: 398 G----IKVDILTYNALILG----------------------------------LCKEGKT 419
K DI+++N+L G CK G+
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 420 KKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
+ A + +++L PN T++ LI G C + E A LYK M R N + L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 480 MSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGL 539
+ FC+ + RA E+ M+E + P+S++ + + G G + AMK KM +G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 120/262 (45%), Gaps = 23/262 (8%)
Query: 138 LTLETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFD 197
L + + +++ L N K K + I+ D + DL + ++F
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVE---DMEKSDLVPDM---------------VIFT 342
Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
+ Y + + A + + ++ + GF P + + + + + + ++ A+ ++ + N
Sbjct: 343 TMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKAN 402
Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
+ +YT+ ++ A CK G +F + G +P Y + I+G C +G L A
Sbjct: 403 DV---MYTV--LIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
K K M + G+ +++ + TLI+G KG + EA ++F EM + +SP+ ++ LI
Sbjct: 458 FKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRA 517
Query: 378 YGQVGNSEMGASLYEEMLRNGI 399
Y + GN + L +M R G+
Sbjct: 518 YEKEGNMAAASDLLLDMQRRGL 539
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 172/346 (49%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+++L + R + A +M G+ P I + + L+ +R+ A+ +M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
P+ T ++H AV + M G P++ TY +++G C +G
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
LA+ N ME I+ +V+ FNT+I CK + +A +F EM+ + PNVVTY++LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+ G + L +M+ I +++T+NALI KEGK +A L D+ K S+
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
P+ TY++L+ G C+ ++A Q+++ M+ C P+ + L+ FC+++ + E+
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL 422
Query: 496 LLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
EM + + D++ + L GL H G + A K+F++M G+ P
Sbjct: 423 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468
Score = 169 bits (427), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 183/380 (48%), Gaps = 14/380 (3%)
Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
S L + + R+ D+ LV ++ F T H K A +M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
G P + + ++ L D+AL +M +I +V N ++ + CK ++
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
A+ +FK ME+ G P+V TY++LIS C+ G S A + + M + I PN++TFN LI
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
F K+GK EA +++ +M ++ P++ TYN+L+NG+ + ++E M+
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D++TYN LI G CK + + L +++ LV + TY+ LI G + + A +++
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
K M+ G P+ + +L+ C N ++A EV M + + D I + + G+
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKA 518
Query: 522 GKDELAMKLFRKMEIRGLLP 541
GK + LF + ++G+ P
Sbjct: 519 GKVDDGWDLFCSLSLKGVKP 538
Score = 160 bits (405), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 13/362 (3%)
Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
H K +A F M LP I NK LS++ ++ D+ + ++M+R I +Y
Sbjct: 62 HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY 121
Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLM 324
T N++++ FC+ I A+ + M +G+ PS+ T ++L++G+C+ +S A+ + M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 325 EKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNS 384
+ G +P+ ITF TLI G K EA + M PN+VTY ++NG + G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 385 EMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL 444
++ +L +M I+ D++ +N +I LCK A L K+++ + PN TYS+L
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 445 ITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCM 504
I+ C A QL MI PN F L+ F + F A ++ +M+++ +
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 505 APDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRGLLP---------KGFDKLRTINCA 553
PD + L +G C D L A ++F M + P KGF K + +
Sbjct: 362 DPDIFTYNSLVNGF--CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 554 PE 555
E
Sbjct: 420 TE 421
Score = 153 bits (387), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 165/345 (47%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
++ ++F+ + + + +A + F +M G P + + + +S L R A
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+M +I+PN+ T N ++ AF K G A +++ +M P + TYN+L++G C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
L A + M P+V+T+NTLI GFCK ++ + +F EM + + V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
TY TLI G G+ + ++++M+ +G+ DI+TY+ L+ GLC GK +KA + +
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
K+ + + Y+ +I G C + + L+ S+ G +PN + ++S C
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 490 DRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
A +L +M E P+S + L G + +L R+M
Sbjct: 557 QEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 112 bits (280), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
+++ + F KL+D ++ R D ++ L + + A F M
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIK--RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
P + + N + S+RV+ ++EM + + T ++ G +
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A +VFK M S G P + TY+ L+ G CN G L A++ + M+K+ I+ ++ + T+I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G CK GK+ + +F + V PNVVTYNT+I+G + +L ++M +G
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
+ TYN LI ++G +A L++++ V +AST
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST 612
Score = 86.3 bits (212), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++++G S + ++LF + S+R + + L + H NA F QM
Sbjct: 405 TLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G P I + + L L ++ +++ AL + M+++ I ++Y ++ CK G ++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
++F ++ G P+V TYNT+ISG C+K LL A M+++G PN T+NTLI
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
+ G + + EM++ + T + N
Sbjct: 583 RAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 186/387 (48%), Gaps = 8/387 (2%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
++++G+ S D + ++ S C + +++ L KT+ +F +A +M+
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIAS--GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
+ G P I N + L ++R+D A F EM N + PN +T + + +
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A + K M G +P+ LI+ +C KG + A M GI + T+ L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G K K+ +A IF EM+ ++P+V +Y LING+ ++GN + +S+++EM+ G+
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
+++ YN L+ G C+ G+ +KA L+ ++ L PNA TY +I G C + AF+L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
+ M G P+ ++ L+ C+ D +RA + + C A + + L + +
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC-ASSTAPFNALINWVFK 778
Query: 521 CGKDELAMKLFRKMEIRGLLPKGFDKL 547
GK EL ++ + L+ FD+
Sbjct: 779 FGKTELKTEVLNR-----LMDGSFDRF 800
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 166/367 (45%), Gaps = 2/367 (0%)
Query: 178 LFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSS 237
LFD ++ S + + + L + Y K R + +M+ + + +
Sbjct: 369 LFDGMIASGLIPQAQA--YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKG 426
Query: 238 LLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPS 297
+ S +D A KEM + PNV ++ F + A+ V K M+ G P
Sbjct: 427 MCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
Query: 298 VTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFS 357
+ YN+LI G + A F M +NG++PN T+ I G+ + + A++
Sbjct: 487 IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVK 546
Query: 358 EMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEG 417
EM+ V PN V LIN Y + G S Y M+ GI D TY L+ GL K
Sbjct: 547 EMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKND 606
Query: 418 KTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFE 477
K A + +++ + P+ +Y LI G N ++A ++ M+ G PN I+
Sbjct: 607 KVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYN 666
Query: 478 MLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIR 537
ML+ FC++ + ++A E+L EM K + P+++ + G G A +LF +M+++
Sbjct: 667 MLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLK 726
Query: 538 GLLPKGF 544
GL+P F
Sbjct: 727 GLVPDSF 733
Score = 154 bits (388), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 132/499 (26%), Positives = 210/499 (42%), Gaps = 60/499 (12%)
Query: 89 LIHSDWKKL---TALSTHLTPFRVKHVLL-KVQKDYVLSLEFFTWVQTHKPSSLTLETHS 144
L +W+ + LS + P V VL K D L FF WV + K + L++ S
Sbjct: 42 LKQENWRDTLVSSNLSIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFS 101
Query: 145 IVLHILTKNRKFKSSESILRGILDSDSFDLP-SKLFDSIL---YSYRMCDSSPLVFDLLF 200
+ L F+ + S++ +++ + P ++++ SI+ + ++F +LF
Sbjct: 102 FLALDLCNFGSFEKALSVVERMIERN---WPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158
Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
Y + A F +P + C L +LL R+D+ YK M +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218
Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKF 320
+V T +M++ A C+ G ++ +V E T + G A+K
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEK-----EFRTATLNVDG---------ALKL 264
Query: 321 KNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQ 380
K M G+ P T++ LI G CK +L +A + EM + VS + TY+ LI+G +
Sbjct: 265 KESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324
Query: 381 VGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNAST 440
N++ L EM+ +GI + Y+ I + KEG +KA L + + L+P A
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 441 YSALITGQCVRKNSERAFQL-----------------------------------YKSMI 465
Y++LI G C KN + ++L K MI
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE 525
SGCRPN I+ L+ TF QN F A VL EM E+ +APD + L GL + +
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504
Query: 526 LAMKLFRKMEIRGLLPKGF 544
A +M GL P F
Sbjct: 505 EARSFLVEMVENGLKPNAF 523
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 182/408 (44%), Gaps = 45/408 (11%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y + K A + M D G L ++ ++ L +++VD A ++EMR
Sbjct: 563 LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
I+P+V++ ++++ F KLG +++A +F M G P+V YN L+ G C G + A
Sbjct: 623 IAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
+ + M G+ PN +T+ T+I G+CK G L EA R+F EMK + P+ Y TL++G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 379 GQVGNSEMGASLYE---------------------EMLRNGIKVDIL------------- 404
++ + E +++ + + +K ++L
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 405 ----TYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
TYN +I LCKEG + A L + +L+P TY++L+ G F +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILS-----ELY 515
+ I +G P+ ++ ++++ F + +A ++ +M K D LS L
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 516 SGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN--CAPENGEKES 561
SG G+ E+A K+ M +P + IN C N E+
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQRVEA 970
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 164/358 (45%), Gaps = 4/358 (1%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+D+L K+ +A +M G + + + LL D A G EM
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ I+ Y + + K G++E+A +F M + G IP Y +LI G+C + +
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
+ M+K I + T+ T++ G C G L A I EM A+ PNVV Y TLI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 376 NGYGQVGNSEMGASL--YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
+ Q NS G ++ +EM GI DI YN+LI+GL K + +A + ++ +N
Sbjct: 460 KTFLQ--NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
L PNA TY A I+G A + K M G PNK + L++ +C+ A
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTIN 551
M+++ + D+ + L +GL K + A ++FR+M +G+ P F IN
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLIN 635
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/387 (24%), Positives = 163/387 (42%), Gaps = 61/387 (15%)
Query: 141 ETHSIVLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLF 200
+T++++++ L KN K +E I R ++ K ++SY +L
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFR--------EMRGKGIAPDVFSY----------GVLI 634
Query: 201 KTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRIS 260
++ + A+ F +M + G P + N L S ++ A EM +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 261 PNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----------- 309
PN T ++ +CK G + A +F M+ G +P Y TL+ G C
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 310 ---NK-----------GLLSLAMKFKNLMEKNGI-------------QPNVITFNTLIFG 342
NK L++ KF K + +PN +T+N +I
Sbjct: 755 FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 343 FCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVD 402
CK+G L A +F +M+ N+ P V+TY +L+NGY ++G +++E + GI+ D
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 403 ILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA-----STYSALITGQCVRKNSERA 457
+ Y+ +I KEG T KA LV + + V + ST AL++G E A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFC 484
++ ++M+R P+ L++ C
Sbjct: 935 EKVMENMVRLQYIPDSATVIELINESC 961
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 173/344 (50%), Gaps = 4/344 (1%)
Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
SP F ++ + YA K A F M ++G + S N L L S+RV+ A +
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
+ +R R S + T N++++ +C + +A+EV K M G P++TTYNT++ G
Sbjct: 185 RALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
G + A +F M+K + +V+T+ T++ GF G++ A +F EM V P+V TY
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDK 431
N +I + N E ++EEM+R G + ++ TYN LI GL G+ + L++ ++
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 432 NSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC---QNED 488
PN TY+ +I E+A L++ M C PN + +L+S ++ED
Sbjct: 364 EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSED 423
Query: 489 FDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
A ++LLEM+E+ P + + +GL G A ++ R
Sbjct: 424 MVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGNQAFAKEILR 467
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 157/310 (50%), Gaps = 4/310 (1%)
Query: 245 DIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTL 304
D A+ + M + ++ + N ++ CK +E+A E+F+ + F TYN +
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201
Query: 305 ISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNV 364
++G C A++ M + GI PN+ T+NT++ GF + G++ A F EMK +
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 365 SPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAY 424
+VVTY T+++G+G G + ++++EM+R G+ + TYNA+I LCK+ + A
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 425 LVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFC 484
+ +++ + PN +TY+ LI G R +L + M GC PN + M++ +
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Query: 485 QNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDE---LAMKLFRKMEIRGLLP 541
+ + ++A + +M P+ + L SG+ + E +A KL +M RG +P
Sbjct: 382 ECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIP 441
Query: 542 KGFDKLRTIN 551
+ F R +N
Sbjct: 442 RKFTFNRVLN 451
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 143/289 (49%), Gaps = 3/289 (1%)
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
MR RI P+ T +V + G ++AV++F NM G + ++NT++ C
Sbjct: 117 MRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKR 176
Query: 314 LSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYN 372
+ A + F+ L + + + +T+N ++ G+C + +A + EM ++PN+ TYN
Sbjct: 177 VEKAYELFRALRGRFSV--DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 373 TLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKN 432
T++ G+ + G + EM + ++D++TY ++ G G+ K+A + ++ +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 433 SLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRA 492
++P+ +TY+A+I C + N E A +++ M+R G PN + +L+ +F R
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 493 AEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
E++ M + P+ + + C + E A+ LF KM LP
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 7/213 (3%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R C+ + + + + + + A + F +M G LP + + N + L + V+
Sbjct: 259 RDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVEN 318
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A+ ++EM R PNV T N+++ G R E+ + ME+ G P+ TYN +I
Sbjct: 319 AVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIR 378
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHE---ANRIFSEMKATN 363
+ + A+ M PN+ T+N LI G + + + A ++ EM
Sbjct: 379 YYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERG 438
Query: 364 VSPNVVTYNTLINGYGQVGNSEMGASLYEEMLR 396
P T+N ++NG GN + +E+LR
Sbjct: 439 FIPRKFTFNRVLNGLLLTGNQ----AFAKEILR 467
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 183/362 (50%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L KT K +A D F M P I N+ LS+++ ++ D+ + K+M
Sbjct: 56 LSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG 115
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
I ++YT N+V++ FC + A+ + M +G+ P T +L++G C + +S A+
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
+ M + G +P+++ +N +I CK ++++A F E++ + PNVVTY L+NG
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
A L +M++ I +++TY+AL+ K GK +A L +++ + S+ P+
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TYS+LI G C+ + A Q++ M+ GC + + L++ FC+ + + ++ E
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
M ++ + +++ + L G G + A + F +M+ G+ P + + +NGE
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 559 KE 560
E
Sbjct: 416 LE 417
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 177/359 (49%), Gaps = 8/359 (2%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ + + K+ +A D F ++ G P + + ++ L +S R A +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M + +I+PNV T + ++ AF K G + A E+F+ M M P + TY++LI+G C
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A + +LM G +V+++NTLI GFCK ++ + ++F EM + N VTYNT
Sbjct: 311 IDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNT 370
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI G+ Q G+ + + +M GI DI TYN L+ GLC G+ +KA + +D+ K
Sbjct: 371 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 430
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
+ + TY+ +I G C E A+ L+ S+ G +P+ + +MS C
Sbjct: 431 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 490
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
+ +M ++ + + LS+ G L+ +L +KM G P +++ C
Sbjct: 491 ALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKDIKSGVC 541
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 161/324 (49%)
Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
+M G+ P + ++ RV A+ +M P++ N ++ + CK
Sbjct: 145 KMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTK 204
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFN 337
+ A + FK +E G P+V TY L++G CN S A + + M K I PNVIT++
Sbjct: 205 RVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 338 TLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRN 397
L+ F K GK+ EA +F EM ++ P++VTY++LING + +++ M+
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 398 GIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERA 457
G D+++YN LI G CK + + L +++ + LV N TY+ LI G + ++A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 458 FQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSG 517
+ + M G P+ + +L+ C N + ++A + +M ++ M D + + + G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 518 LHHCGKDELAMKLFRKMEIRGLLP 541
+ GK E A LF + ++GL P
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKP 468
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 17/266 (6%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
S++ G+ D D +++FD L + C + + ++ L + K+ + F +M
Sbjct: 300 SLINGLCLHDRIDEANQMFD--LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G + + N + + VD A F+ +M ISP+++T N+++ C G +E
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
+A+ +F++M+ + TY T+I G C G + A + G++P+++T+ T++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G C KG LHE ++++MK + N T + G+ + A L ++ML G
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD--------GDITLSAELIKKMLSCG-- 527
Query: 401 VDILTYNALILGLCKEGKTKKAAYLV 426
Y +L K G KKA L+
Sbjct: 528 -----YAPSLLKDIKSGVCKKALSLL 548
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 170 bits (430), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 170/330 (51%)
Query: 212 ATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMH 271
A + M G +P + N L S + A+GF K+MR + + P+V T +++M
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 272 AFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQP 331
CK G A ++F +M G P +TTY TL+ G+ KG L +LM +NGI P
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 369
Query: 332 NVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLY 391
+ F+ LI + K+GK+ +A +FS+M+ ++PN VTY +I + G E +
Sbjct: 370 DHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYF 429
Query: 392 EEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVR 451
E+M+ G+ + YN+LI GLC K ++A L+ ++ + N ++++I C
Sbjct: 430 EQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKE 489
Query: 452 KNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
+ +L++ M+R G +PN + L++ +C D A ++L M+ + P+++
Sbjct: 490 GRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTY 549
Query: 512 SELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
S L +G + E A+ LF++ME G+ P
Sbjct: 550 STLINGYCKISRMEDALVLFKEMESSGVSP 579
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 7/358 (1%)
Query: 189 CDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRD---YGFLPIIESCNKFLSSLLDSERVD 245
C + +++L K + + A + M D G P + S ++ D
Sbjct: 154 CIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSD 213
Query: 246 IALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLI 305
A Y EM I P+V T N ++ A CK +++A+EV M G +P TYN+++
Sbjct: 214 KAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSIL 273
Query: 306 SGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
G+C+ G A+ F M +G++P+V+T++ L+ CK G+ EA +IF M +
Sbjct: 274 HGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLK 333
Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
P + TY TL+ GY G L + M+RNGI D ++ LI K+GK +A +
Sbjct: 334 PEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLV 393
Query: 426 VKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQ 485
+ + L PNA TY A+I C E A ++ MI G P ++ L+ C
Sbjct: 394 FSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 453
Query: 486 NEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC--GKDELAMKLFRKMEIRGLLP 541
++RA E++LEML++ + ++I + + HC G+ + KLF M G+ P
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIID--SHCKEGRVIESEKLFELMVRIGVKP 509
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 170/344 (49%)
Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
VF +L YA + K A F +MR G P + + L S RV+ A+ ++++M
Sbjct: 373 VFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQM 432
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
+SP N ++H C ERA E+ M G + +N++I HC +G +
Sbjct: 433 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 492
Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
+ K LM + G++PNVIT+NTLI G+C GK+ EA ++ S M + + PN VTY+TL
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
INGY ++ E L++EM +G+ DI+TYN ++ GL + +T A L + ++
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 612
Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
STY+ ++ G C K ++ A Q+++++ + F +++ + D A +
Sbjct: 613 QIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKD 672
Query: 495 VLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
+ + + P+ + + G E +LF ME G
Sbjct: 673 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 716
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 150/299 (50%)
Query: 243 RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYN 302
+VD A+ + +MR+ ++PN T V+ CK G +E A+ F+ M G P YN
Sbjct: 386 KVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYN 445
Query: 303 TLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
+LI G C A + M GI N I FN++I CK+G++ E+ ++F M
Sbjct: 446 SLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
V PNV+TYNTLINGY G + L M+ G+K + +TY+ LI G CK + + A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
L K+++ + + P+ TY+ ++ G + + A +LY + SG + + +++
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
C+N+ D A ++ + + ++ + + L G+++ A LF GL+P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 154/344 (44%), Gaps = 6/344 (1%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ + LL + A F M G P I + L + G
Sbjct: 302 VTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDL 361
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M RN I P+ Y ++++ A+ K G +++A+ VF M G P+ TY +I C G
Sbjct: 362 MVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGR 421
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ AM + M G+ P I +N+LI G C K A + EM + N + +N+
Sbjct: 422 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 481
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
+I+ + + G L+E M+R G+K +++TYN LI G C GK +A L+ +
Sbjct: 482 IIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVG 541
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
L PN TYS LI G C E A L+K M SG P+ + +++ Q A
Sbjct: 542 LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAK 601
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL---AMKLFRKM 534
E+ + + E + I LS LH K++L A+++F+ +
Sbjct: 602 ELYVRITE---SGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 642
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 3/283 (1%)
Query: 285 VFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN---GIQPNVITFNTLIF 341
V + M +G IP+V +YN L+ G C++ A++ ++M + G P+V+++ T+I
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
GF K+G +A + EM + P+VVTYN++I + + + M++NG+
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
D +TYN+++ G C G+ K+A +K + + + P+ TYS L+ C A +++
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHC 521
SM + G +P + L+ + +L M+ + PD + S L
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 522 GKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGEKESGGL 564
GK + AM +F KM +GL P I ++G E L
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 164/339 (48%), Gaps = 20/339 (5%)
Query: 176 SKLFDSILYSYRMCDS--SP--LVFDLLFKTYAHRKKFRNATDTFCQMRDYGF-LPIIES 230
++ D++LY +M D SP +V++ L K+ A + +M D G L I
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTI-- 477
Query: 231 CNKFLSSLLDSE----RVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVF 286
F +S++DS RV + ++ M R + PNV T N +++ +C G ++ A+++
Sbjct: 478 ---FFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL 534
Query: 287 KNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKK 346
M S+G P+ TY+TLI+G+C + A+ ME +G+ P++IT+N ++ G +
Sbjct: 535 SGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594
Query: 347 GKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTY 406
+ A ++ + + + TYN +++G + ++ +++ + +K++ T+
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654
Query: 407 NALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSAL---ITGQCVRKNSERAFQLYKS 463
N +I L K G+ +A L N LVPN TY + I GQ + E QL+ S
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL---EELDQLFLS 711
Query: 464 MIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEK 502
M +GC + + ++ Q + RA L + EK
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 128/310 (41%), Gaps = 44/310 (14%)
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMG---FIPSVTTYNTLIS 306
F + +RR R ++Y LN + + AV + M G P + TY LI
Sbjct: 38 FDELLRRGR-GASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 307 GHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA-------------- 352
C G L L + K G + + I F L+ G C + +A
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 353 ----------------NR---------IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
NR + ++ + P+VV+Y T+ING+ + G+S+
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
S Y EML GI D++TYN++I LCK KA ++ + KN ++P+ TY++++ G
Sbjct: 216 YSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHG 275
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
C + A K M G P+ + +LM C+N A ++ M ++ + P+
Sbjct: 276 YCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPE 335
Query: 508 SIILSELYSG 517
L G
Sbjct: 336 ITTYGTLLQG 345
Score = 75.9 bits (185), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 96/193 (49%), Gaps = 5/193 (2%)
Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
NR+ + A V+P++ TY LI + G ++G + +++ G +VD + + L+ G
Sbjct: 73 NRM-ARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 413 LCKEGKTKKAAYLV-KDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI--RSGC 469
LC + +T A +V + + + +PN +Y+ L+ G C S+ A +L M R G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 470 RPNKHI-FEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAM 528
P + + +++ F + D D+A EML++ + PD + + + + L + AM
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 529 KLFRKMEIRGLLP 541
++ M G++P
Sbjct: 252 EVLNTMVKNGVMP 264
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 21/319 (6%)
Query: 146 VLHILTKNRKFKSSESILRGILDSDSFDLPSKLFDSILYSY----RMCDSSPL------- 194
++H L K++ +E ++ +LD L + F+SI+ S+ R+ +S L
Sbjct: 447 LIHGLCTCNKWERAEELILEMLDR-GICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRI 505
Query: 195 -------VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIA 247
++ L Y K A M G P + + ++ R++ A
Sbjct: 506 GVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDA 565
Query: 248 LGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISG 307
L +KEM + +SP++ T N+++ + A E++ + G ++TYN ++ G
Sbjct: 566 LVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHG 625
Query: 308 HCNKGLLSLAMK-FKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSP 366
C L A++ F+NL + ++ TFN +I K G+ EA +F + + P
Sbjct: 626 LCKNKLTDDALQMFQNLCLMD-LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVP 684
Query: 367 NVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLV 426
N TY + G E L+ M NG VD N ++ L + G+ +A +
Sbjct: 685 NYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYL 744
Query: 427 KDLDKNSLVPNASTYSALI 445
+D+ AST S I
Sbjct: 745 SMIDEKHFSLEASTASLFI 763
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 35/218 (16%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ + L Y + +A F +M G P I + N L L + R A Y
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNM------------------------ 289
+ + + T N+++H CK + + A+++F+N+
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 290 -----------ESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNT 338
S G +P+ TY + +GLL + ME NG + N
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 339 LIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLIN 376
++ ++G++ A S + + S T + I+
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID 764
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 164/314 (52%), Gaps = 4/314 (1%)
Query: 195 VFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
V D L K Y H +A + F +M + G P + + + +S L + ER A +M
Sbjct: 266 VIDSLCK-YRHED---DALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLL 314
+I+PNV T N ++ AF K G + A +++ M P + TY++LI+G C L
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 315 SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTL 374
A LM PNV+T+NTLI GFCK ++ E +F EM + N VTY TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 375 INGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSL 434
I+G+ Q + + ++++M+ +G+ +I+TYN L+ GLCK GK +KA + + L ++ +
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 435 VPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAE 494
P TY+ +I G C E + L+ S+ G +P+ I+ ++S FC+ + A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 495 VLLEMLEKCMAPDS 508
+ +M E PDS
Sbjct: 562 LFRKMREDGPLPDS 575
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 171/364 (46%)
Query: 199 LFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNR 258
L Y H K+ +A QM + G+ P + + L + A+ M +
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 259 ISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAM 318
PN+ T +V++ CK G I+ A + ME+ +V Y+T+I C A+
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 280
Query: 319 KFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGY 378
ME G++PNVIT+++LI C + +A+R+ S+M ++PNVVT+N LI+ +
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 379 GQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNA 438
+ G LY+EM++ I DI TY++LI G C + +A ++ + + PN
Sbjct: 341 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 400
Query: 439 STYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLE 498
TY+ LI G C K + +L++ M + G N + L+ F Q D D A V +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 499 MLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENGE 558
M+ + P+ + + L GL GK E AM +F ++ + P + I + G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 559 KESG 562
E G
Sbjct: 521 VEDG 524
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 183/381 (48%), Gaps = 16/381 (4%)
Query: 176 SKLFDSILYSYRMCDSSPLVFDLL----------FKTYAH----RKKFRNATDTFCQMRD 221
S L + + R+ D+ LV ++ F T H K A +M
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 222 YGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIER 281
G P + + ++ L +D+A +M +I NV + V+ + CK +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDD 278
Query: 282 AVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIF 341
A+ +F ME+ G P+V TY++LIS CN S A + + M + I PNV+TFN LI
Sbjct: 279 ALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALID 338
Query: 342 GFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKV 401
F K+GKL EA +++ EM ++ P++ TY++LING+ + ++E M+
Sbjct: 339 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 402 DILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLY 461
+++TYN LI G CK + + L +++ + LV N TY+ LI G ++ + A ++
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 462 KSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKC-MAPDSIILSELYSGLHH 520
K M+ G PN + L+ C+N ++A V+ E L++ M P + + G+
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCK 517
Query: 521 CGKDELAMKLFRKMEIRGLLP 541
GK E LF + ++G+ P
Sbjct: 518 AGKVEDGWDLFCSLSLKGVKP 538
Score = 156 bits (395), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 183/371 (49%), Gaps = 35/371 (9%)
Query: 205 HRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVY 264
H K +A F M LP I NK LS++ ++ D+ + ++M+R IS N+Y
Sbjct: 62 HSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLY 121
Query: 265 TLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN-------------- 310
T N++++ FC+ I A+ + M +G+ PS+ T ++L++G+C+
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 311 ----------------KGLL-----SLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKL 349
GL S A+ + M + G QPN++T+ ++ G CK+G +
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 350 HEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNAL 409
A + ++M+A + NVV Y+T+I+ + + + +L+ EM G++ +++TY++L
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 410 ILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGC 469
I LC + A+ L+ D+ + + PN T++ALI A +LY MI+
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 470 RPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMK 529
P+ + L++ FC ++ D A + M+ K P+ + + L +G + + ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 530 LFRKMEIRGLL 540
LFR+M RGL+
Sbjct: 422 LFREMSQRGLV 432
Score = 155 bits (392), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%)
Query: 235 LSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGF 294
+ SL D AL + EM + PNV T + ++ C A + +M
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKI 326
Query: 295 IPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANR 354
P+V T+N LI +G L A K + M K I P++ T+++LI GFC +L EA
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 355 IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLC 414
+F M + + PNVVTYNTLING+ + + G L+ EM + G+ + +TY LI G
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 415 KEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKH 474
+ A + K + + + PN TY+ L+ G C E+A +++ + RS P +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 475 IFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKM 534
+ +++ C+ + ++ + K + PD II + + SG G E A LFRKM
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 535 EIRGLLP 541
G LP
Sbjct: 567 REDGPLP 573
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 162/319 (50%)
Query: 233 KFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESM 292
+ L + L S ++D A+G + M ++R P+++ N ++ A K+ + + + + M+ +
Sbjct: 55 EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114
Query: 293 GFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEA 352
G ++ TYN LI+ C + +SLA+ M K G +P+++T ++L+ G+C ++ +A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174
Query: 353 NRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
+ +M P+ +T+ TLI+G + +L + M++ G + +++TY ++ G
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
LCK G A L+ ++ + N YS +I C ++ + A L+ M G RPN
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ L+S C E + A+ +L +M+E+ + P+ + + L GK A KL+
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 533 KMEIRGLLPKGFDKLRTIN 551
+M R + P F IN
Sbjct: 355 EMIKRSIDPDIFTYSSLIN 373
Score = 132 bits (332), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 131/255 (51%), Gaps = 2/255 (0%)
Query: 187 RMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDI 246
R + + + F+ L + K A + +M P I + + ++ +R+D
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 247 ALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLIS 306
A ++ M PNV T N +++ FCK I+ VE+F+ M G + + TY TLI
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 307 GHCN-KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS 365
G + + M FK M +G+ PN++T+NTL+ G CK GKL +A +F ++ + +
Sbjct: 444 GFFQARDCDNAQMVFKQ-MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 366 PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
P + TYN +I G + G E G L+ + G+K D++ YN +I G C++G ++A L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 426 VKDLDKNSLVPNAST 440
+ + ++ +P++ T
Sbjct: 563 FRKMREDGPLPDSGT 577
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 106/222 (47%)
Query: 331 PNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASL 390
P++ FN L+ K K + +M+ +S N+ TYN LIN + + + +L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 391 YEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCV 450
+M++ G + I+T ++L+ G C + A LV + + P+ T++ LI G +
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 451 RKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSII 510
+ A L M++ GC+PN + ++++ C+ D D A +L +M + + +I
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 511 LSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINC 552
S + L ++ A+ LF +ME +G+ P I+C
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 170/362 (46%), Gaps = 35/362 (9%)
Query: 218 QMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLG 277
+M +YGF P + L+ L S +AL +++M I +V ++V+ + CK G
Sbjct: 200 RMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDG 259
Query: 278 IIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKG------------------------- 312
+ A+ +F ME G V TY++LI G CN G
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFS 319
Query: 313 -LLSLAMKFKNLMEKN---------GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKAT 362
L+ + +K L+E GI P+ IT+N+LI GFCK+ LHEAN++F M +
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 363 NVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA 422
P++VTY+ LIN Y + + G L+ E+ G+ + +TYN L+LG C+ GK A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 423 AYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMST 482
L +++ + P+ TY L+ G C +A ++++ M +S I+ +++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 483 FCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPK 542
C D A + + +K + PD + + + GL G A LFRKM+ G P
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 543 GF 544
F
Sbjct: 560 DF 561
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 175/361 (48%)
Query: 198 LLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRN 257
++ Y +KK A + G+ P + + ++ RV A+ M
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 258 RISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLA 317
+ P++ T++ +++ C G + A+ + M GF P TY +++ C G +LA
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 318 MKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLING 377
+ ME+ I+ +V+ ++ +I CK G +A +F+EM+ + +VVTY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 378 YGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPN 437
G + GA + EM+ I D++T++ALI KEGK +A L ++ + P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 438 ASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLL 497
TY++LI G C A Q++ M+ GC P+ + +L++++C+ + D +
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 498 EMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLLPKGFDKLRTINCAPENG 557
E+ K + P++I + L G GK A +LF++M RG+ P ++ +NG
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 558 E 558
E
Sbjct: 470 E 470
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 182/369 (49%), Gaps = 35/369 (9%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K +A D F M LP N+ S++ +++ D+ LGF K M N I ++YT+
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++++ +C+ + A V +G+ P T++TL++G C +G +S A+ + M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEA-----------------------NR---------- 354
+P+++T +TLI G C KG++ EA NR
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 355 --IFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILG 412
+F +M+ N+ +VV Y+ +I+ + G+ + SL+ EM GIK D++TY++LI G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 413 LCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
LC +GK A +++++ +++P+ T+SALI A +LY MI G P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 473 KHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFR 532
+ L+ FC+ A ++ M+ K PD + S L + + + M+LFR
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR 409
Query: 533 KMEIRGLLP 541
++ +GL+P
Sbjct: 410 EISSKGLIP 418
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 159/342 (46%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ F L + + A +M + P + + + ++ L RV AL
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M P+ T V++ CK G A+++F+ ME SV Y+ +I C G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
A+ N ME GI+ +V+T+++LI G C GK + ++ EM N+ P+VVT++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+ + + G LY EM+ GI D +TYN+LI G CKE +A + +
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAA 493
P+ TYS LI C K + +L++ + G PN + L+ FCQ+ + A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 494 EVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKME 535
E+ EM+ + + P + L GL G+ A+++F KM+
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Score = 155 bits (393), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 168/350 (48%), Gaps = 4/350 (1%)
Query: 191 SSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGF 250
+S + + ++ + F +A F +M G + + + + L + + D
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 251 YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCN 310
+EM I P+V T + ++ F K G + A E++ M + G P TYN+LI G C
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 311 KGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVT 370
+ L A + +LM G +P+++T++ LI +CK ++ + R+F E+ + + PN +T
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 371 YNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLD 430
YNTL+ G+ Q G L++EM+ G+ ++TY L+ GLC G+ KA + + +
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 431 KNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFD 490
K+ + Y+ +I G C + A+ L+ S+ G +P+ + +++ C+
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLS 542
Query: 491 RAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDEL--AMKLFRKMEIRG 538
A + +M E PD + L H G L +++L +M++ G
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRA--HLGGSGLISSVELIEEMKVCG 590
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 122/252 (48%), Gaps = 6/252 (2%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
S++ G + +++FD L + C+ + + +L +Y K+ + F ++
Sbjct: 355 SLIDGFCKENCLHEANQMFD--LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G +P + N + S +++ A ++EM + P+V T +++ C G +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
+A+E+F+ M+ + YN +I G CN + A + G++P+V+T+N +I
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGAS--LYEEMLRNG 398
G CKKG L EA+ +F +MK +P+ TYN LI + +G S + +S L EEM G
Sbjct: 533 GGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAH--LGGSGLISSVELIEEMKVCG 590
Query: 399 IKVDILTYNALI 410
D T +I
Sbjct: 591 FSADSSTIKMVI 602
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+ ++ L + K A + F +M G P + + L L D+ ++ AL +++
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M+++R++ + N+++H C ++ A +F ++ G P V TYN +I G C KG
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
LS A M+++G P+ T+N LI L + + EMK S + T
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 374 LIN 376
+I+
Sbjct: 601 VID 603
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/334 (30%), Positives = 160/334 (47%)
Query: 208 KFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLN 267
K A F M+ +G LP + + + + + V A G YKE+ + PNV
Sbjct: 249 KMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFG 308
Query: 268 MVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKN 327
++ FCK + A +F +M G P++ YN LI GHC G + A+ + ME
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 328 GIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMG 387
+ P+V T+ LI G C + ++ EANR+F +MK + P+ TYN+LI+GY + N E
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 388 ASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITG 447
L EM +G++ +I+T++ LI G C K A L ++ +VP+ TY+ALI
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Query: 448 QCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPD 507
N + A +LY M+ +G PN H F L+ F + A + E ++ +
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 508 SIILSELYSGLHHCGKDELAMKLFRKMEIRGLLP 541
+ + L GL G A + F M G+ P
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582
Score = 162 bits (409), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 204/421 (48%), Gaps = 9/421 (2%)
Query: 126 FFTWVQTHKPSSLTLETHSIVLHILTKNRKFKSSESILRGILD-----SDSFDLPSKLFD 180
F T ++ S L++ S V+H+LT K+ + +++ +++ S+ ++ +LF+
Sbjct: 61 FETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFN 120
Query: 181 SILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLD 240
+ L + S VF LL + F A R+ P ++C L+ L+
Sbjct: 121 A-LEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVR 176
Query: 241 SERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
R D Y+ M + P+V+ ++ K G+ + ++ M S+G P+V
Sbjct: 177 RRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI 236
Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
Y I C + A K LM+K+G+ PN+ T++ +I G+CK G + +A ++ E+
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
+ PNVV + TL++G+ + SL+ M++ G+ ++ YN LI G CK G
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNML 356
Query: 421 KAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLM 480
+A L+ +++ +L P+ TY+ LI G C+ A +L++ M P+ + L+
Sbjct: 357 EAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLI 416
Query: 481 STFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRGLL 540
+C+ + ++A ++ EM + P+ I S L G + + AM L+ +M I+G++
Sbjct: 417 HGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 541 P 541
P
Sbjct: 477 P 477
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 145/312 (46%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMR 255
+ + Y R A + ++ LP + + + + A + M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV 331
Query: 256 RNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLS 315
+ + PN+Y N ++H CK G + AV + MES+ P V TY LI+G C + ++
Sbjct: 332 KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVA 391
Query: 316 LAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLI 375
A + M+ I P+ T+N+LI G+CK+ + +A + SEM A+ V PN++T++TLI
Sbjct: 392 EANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLI 451
Query: 376 NGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLV 435
+GY V + + LY EM GI D++TY ALI KE K+A L D+ + +
Sbjct: 452 DGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Query: 436 PNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEV 495
PN T++ L+ G A Y+ + N F L+ CQN RA+
Sbjct: 512 PNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRF 571
Query: 496 LLEMLEKCMAPD 507
+M + PD
Sbjct: 572 FSDMRSCGITPD 583
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
+VF L + ++ A F M +G P + N + S + A+G E
Sbjct: 305 VVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSE 364
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M +SP+V+T ++++ C + A +F+ M++ PS TYN+LI G+C +
Sbjct: 365 MESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN 424
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
+ A+ + M +G++PN+ITF+TLI G+C + A ++ EM + P+VVTY
Sbjct: 425 MEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
LI+ + + N + LY +ML GI + T+ L+ G KEG+ A ++ ++
Sbjct: 485 LIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQR 544
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPN 472
N ++ LI G C RA + + M G P+
Sbjct: 545 SCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPD 583
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 145/304 (47%), Gaps = 1/304 (0%)
Query: 190 DSSPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALG 249
D + V++ L + A +M P + + ++ L ++V A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+++M+ RI P+ T N ++H +CK +E+A+++ M + G P++ T++TLI G+C
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVV 369
N + AM M GI P+V+T+ LI K+ + EA R++S+M + PN
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDH 515
Query: 370 TYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDL 429
T+ L++G+ + G + Y+E + + + + LI GLC+ G +A+ D+
Sbjct: 516 TFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDM 575
Query: 430 DKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDF 489
+ P+ +Y +++ G K L MI++G PN + L++ F Q +
Sbjct: 576 RSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNL-LVNQLLARFYQANGY 634
Query: 490 DRAA 493
++A
Sbjct: 635 VKSA 638
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%)
Query: 192 SPLVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFY 251
S ++ L Y A D +M G P I + + + + + A+G Y
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 252 KEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNK 311
EM I P+V T ++ A K ++ A+ ++ +M G P+ T+ L+ G +
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKE 527
Query: 312 GLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTY 371
G LS+A+ F + N + F LI G C+ G + A+R FS+M++ ++P++ +Y
Sbjct: 528 GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSY 587
Query: 372 NTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYL 425
+++ G+ Q L +M++ GI ++L L G K A +L
Sbjct: 588 VSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFL 641
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 123/273 (45%), Gaps = 9/273 (3%)
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
R ++++S F S+ ++ LI GL A+ M+ P+ +++
Sbjct: 117 RLFNALEDIQSPKF--SIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSIL 171
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
G ++ + + M + + P+V Y L + G L +EM GIK
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 401 VDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQL 460
++ Y IL LC++ K ++A + + + K+ ++PN TYSA+I G C N +A+ L
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 461 YKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHH 520
YK ++ + PN +F L+ FC+ + A + + M++ + P+ + + L G H
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG--H 349
Query: 521 CGKDEL--AMKLFRKMEIRGLLPKGFDKLRTIN 551
C + A+ L +ME L P F IN
Sbjct: 350 CKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 170/340 (50%), Gaps = 20/340 (5%)
Query: 197 DLLFKTYAHR-KKFRNATDTFCQM-RDYGFLPIIESCNKFLSSLLDSERVDIALGFYKEM 254
+L K+ +H K +A D F M R F ++ CNK + + R D+A+ Y++M
Sbjct: 74 ELKLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVD-CNKVIGVFVRMNRPDVAISLYRKM 132
Query: 255 RRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC----- 309
RI N+Y+ N+++ FC + ++ F + +GF P V T+NTL+ G C
Sbjct: 133 EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRI 192
Query: 310 -----------NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSE 358
G L F ++E G+ P VITFNTLI G C +G++ EA + ++
Sbjct: 193 SEALALFGYMVETGFLEAVALFDQMVEI-GLTPVVITFNTLINGLCLEGRVLEAAALVNK 251
Query: 359 MKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGK 418
M + +VVTY T++NG ++G+++ +L +M IK D++ Y+A+I LCK+G
Sbjct: 252 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 311
Query: 419 TKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
A YL ++ + + PN TY+ +I G C A +L + MI P+ F
Sbjct: 312 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 371
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
L+S + A ++ EML +C+ PD++ + + G
Sbjct: 372 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 172/387 (44%), Gaps = 46/387 (11%)
Query: 196 FDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIAL------- 248
F++L K + K + TF ++ GF P + + N L L +R+ AL
Sbjct: 144 FNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 249 --GF------YKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTT 300
GF + +M ++P V T N +++ C G + A + M G V T
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 301 YNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMK 360
Y T+++G C G A+ + ME+ I+P+V+ ++ +I CK G +A +FSEM
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 361 ATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTK 420
++PNV TYN +I+G+ G L +M+ I D+LT+NALI KEGK
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 421 KAAYLVKDLDKNSLVPNASTYSALITG-------------------------------QC 449
+A L ++ + P+ TY+++I G C
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 450 VRKNSERAFQLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSI 509
K + QL + + R G N + L+ FC+ ++ + A ++ EM+ + PD+I
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 510 ILSELYSGLHHCGKDELAMKLFRKMEI 536
+ L G K E A++LF +++
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQM 530
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 146/326 (44%), Gaps = 31/326 (9%)
Query: 250 FYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHC 309
+ EM I+PNV+T N ++ FC G A + ++M P V T+N LIS
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377
Query: 310 NKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVS---- 365
+G L A K + M I P+ +T+N++I+GFCK + +A +F M + +V
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNT 437
Query: 366 ---------------------------PNVVTYNTLINGYGQVGNSEMGASLYEEMLRNG 398
N TYNTLI+G+ +V N L++EM+ +G
Sbjct: 438 IIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHG 497
Query: 399 IKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAF 458
+ D +T N L+ G C+ K ++A L + + + + + Y+ +I G C + A+
Sbjct: 498 VCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAW 557
Query: 459 QLYKSMIRSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGL 518
L+ S+ G P+ + +++S FC A + +M + PD+ + L G
Sbjct: 558 DLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGC 617
Query: 519 HHCGKDELAMKLFRKMEIRGLLPKGF 544
G+ + +++L +M G F
Sbjct: 618 LKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 125 bits (315), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 138/286 (48%), Gaps = 4/286 (1%)
Query: 226 PIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIERAVEV 285
P + + N +S+ + ++ A EM I P+ T N +++ FCK + A +
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHM 423
Query: 286 FKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLIFGFCK 345
F M S P V T+NT+I +C + M+ + + G+ N T+NTLI GFC+
Sbjct: 424 FDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCE 479
Query: 346 KGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILT 405
L+ A +F EM + V P+ +T N L+ G+ + E L+E + + I +D +
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVA 539
Query: 406 YNALILGLCKEGKTKKAAYLVKDLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMI 465
YN +I G+CK K +A L L + + P+ TY+ +I+G C + A L+ M
Sbjct: 540 YNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK 599
Query: 466 RSGCRPNKHIFEMLMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIIL 511
+G P+ + L+ + + D++ E++ EM + D+ +
Sbjct: 600 DNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 128/286 (44%), Gaps = 4/286 (1%)
Query: 194 LVFDLLFKTYAHRKKFRNATDTFCQMRDYGFLPIIESCNKFLSSLLDSERVDIALGFYKE 253
L F+ L K A +M P + N + R D A K
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422
Query: 254 MRRNRISPNVYTLNMVMHAFCKLGIIERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGL 313
M SP+V T N ++ +C+ ++ +++ + + G + + TTYNTLI G C
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L+ A M +G+ P+ IT N L++GFC+ KL EA +F ++ + + + V YN
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKAAYLVKDLDKNS 433
+I+G + + L+ + +G++ D+ TYN +I G C + A L + N
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 434 LVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEML 479
P+ STY+ LI G +++ +L M +G + +M+
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 7/262 (2%)
Query: 161 SILRGILDSDSFDLPSKLFDSILYSYRMCDSSPLVFDLLFKTYAHRKKFRNATDTFCQMR 220
S++ G + FD +FD M + F+ + Y K+ ++
Sbjct: 406 SMIYGFCKHNRFDDAKHMFD------LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 221 DYGFLPIIESCNKFLSSLLDSERVDIALGFYKEMRRNRISPNVYTLNMVMHAFCKLGIIE 280
G + + N + + + ++ A ++EM + + P+ T N++++ FC+ +E
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519
Query: 281 RAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTLI 340
A+E+F+ ++ YN +I G C + A + +G++P+V T+N +I
Sbjct: 520 EALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMI 579
Query: 341 FGFCKKGKLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIK 400
GFC K + +AN +F +MK P+ TYNTLI G + G + L EM NG
Sbjct: 580 SGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFS 639
Query: 401 VDILTYNALILGLCKEGKTKKA 422
D T ++ L +G+ K+
Sbjct: 640 GDAFTIK-MVADLITDGRLDKS 660
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 109/254 (42%), Gaps = 19/254 (7%)
Query: 314 LSLAMKFKNLMEKNGIQPNVITFNTLIFGFCKKGKLHEANRIFSEMKATNVSPNVVTYNT 373
L A+ F + M ++ + N +I F + + A ++ +M+ + N+ ++N
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 374 LINGYGQVGNSEMGASLYEEMLRNGIKVDILTYNALILGLCKEGKTKKA----AYLVK-- 427
LI + S + ++ + G + D++T+N L+ GLC E + +A Y+V+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 428 ---------DLDKNSLVPNASTYSALITGQCVRKNSERAFQLYKSMIRSGCRPNKHIFEM 478
+ + L P T++ LI G C+ A L M+ G + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 479 LMSTFCQNEDFDRAAEVLLEMLEKCMAPDSIILSELYSGLHHCGKDELAMKLFRKMEIRG 538
+++ C+ D A +L +M E + PD +I S + L G A LF +M +G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 539 LLPKGFDKLRTINC 552
+ P F T NC
Sbjct: 327 IAPNVF----TYNC 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 203,013,423
Number of Sequences: 539616
Number of extensions: 8379798
Number of successful extensions: 27831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 19181
Number of HSP's gapped (non-prelim): 2941
length of query: 565
length of database: 191,569,459
effective HSP length: 123
effective length of query: 442
effective length of database: 125,196,691
effective search space: 55336937422
effective search space used: 55336937422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)